Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50704.t1 | XP_003607077.1 | 97.5 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 3.00E-278 | 967.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50704.t1 | Q8VZ80 | 67.8 | 503 | 155 | 3 | 17 | 512 | 26 | 528 | 3.8e-189 | 662.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50704.t1 | G7JJX1 | 97.5 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 2.2e-278 | 967.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50704.t1 | MTR_4g072030 | 97.500 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1016 |
MS.gene50704.t1 | MTR_4g069500 | 75.862 | 522 | 119 | 3 | 1 | 515 | 1 | 522 | 0.0 | 795 |
MS.gene50704.t1 | MTR_3g116240 | 75.855 | 497 | 116 | 2 | 1 | 493 | 1 | 497 | 0.0 | 754 |
MS.gene50704.t1 | MTR_4g069500 | 76.059 | 472 | 109 | 2 | 48 | 515 | 1 | 472 | 0.0 | 721 |
MS.gene50704.t1 | MTR_8g077890 | 61.028 | 467 | 179 | 2 | 24 | 487 | 16 | 482 | 0.0 | 568 |
MS.gene50704.t1 | MTR_5g075300 | 56.458 | 480 | 206 | 2 | 22 | 498 | 14 | 493 | 0.0 | 557 |
MS.gene50704.t1 | MTR_6g088450 | 52.891 | 467 | 212 | 1 | 13 | 479 | 44 | 502 | 5.37e-177 | 508 |
MS.gene50704.t1 | MTR_4g069500 | 74.174 | 333 | 82 | 2 | 187 | 515 | 1 | 333 | 2.26e-174 | 494 |
MS.gene50704.t1 | MTR_2g013310 | 51.016 | 492 | 228 | 4 | 19 | 510 | 45 | 523 | 9.92e-167 | 482 |
MS.gene50704.t1 | MTR_7g446340 | 46.863 | 510 | 250 | 5 | 10 | 519 | 42 | 530 | 1.53e-160 | 467 |
MS.gene50704.t1 | MTR_6g007340 | 46.863 | 510 | 250 | 5 | 10 | 519 | 42 | 530 | 1.53e-160 | 467 |
MS.gene50704.t1 | MTR_8g103500 | 50.216 | 464 | 224 | 2 | 24 | 487 | 15 | 471 | 2.71e-158 | 460 |
MS.gene50704.t1 | MTR_5g019870 | 48.188 | 469 | 239 | 2 | 24 | 488 | 12 | 480 | 1.61e-157 | 458 |
MS.gene50704.t1 | MTR_2g013310 | 50.972 | 463 | 214 | 4 | 48 | 510 | 1 | 450 | 1.29e-154 | 449 |
MS.gene50704.t1 | MTR_1g116660 | 33.820 | 479 | 290 | 9 | 14 | 484 | 20 | 479 | 2.16e-76 | 249 |
MS.gene50704.t1 | MTR_7g005910 | 33.750 | 480 | 288 | 8 | 14 | 484 | 18 | 476 | 3.88e-74 | 243 |
MS.gene50704.t1 | MTR_1g116650 | 32.114 | 492 | 282 | 9 | 14 | 493 | 63 | 514 | 4.23e-73 | 241 |
MS.gene50704.t1 | MTR_3g084110 | 32.371 | 485 | 297 | 9 | 17 | 493 | 16 | 477 | 7.90e-73 | 240 |
MS.gene50704.t1 | MTR_4g077740 | 31.263 | 499 | 300 | 11 | 10 | 484 | 18 | 497 | 5.39e-66 | 222 |
MS.gene50704.t1 | MTR_7g082270 | 32.371 | 485 | 286 | 12 | 10 | 484 | 47 | 499 | 6.50e-65 | 219 |
MS.gene50704.t1 | MTR_6g018790 | 33.188 | 458 | 271 | 10 | 33 | 484 | 111 | 539 | 3.46e-63 | 216 |
MS.gene50704.t1 | MTR_3g074410 | 30.658 | 486 | 291 | 11 | 31 | 491 | 29 | 493 | 1.91e-62 | 213 |
MS.gene50704.t1 | MTR_5g077580 | 26.944 | 553 | 286 | 7 | 23 | 484 | 22 | 547 | 1.11e-58 | 204 |
MS.gene50704.t1 | MTR_2g049020 | 35.244 | 349 | 211 | 6 | 23 | 368 | 22 | 358 | 2.53e-58 | 203 |
MS.gene50704.t1 | MTR_0009s0370 | 30.492 | 528 | 312 | 14 | 16 | 513 | 9 | 511 | 8.11e-58 | 200 |
MS.gene50704.t1 | MTR_5g006070 | 29.079 | 478 | 294 | 8 | 31 | 483 | 26 | 483 | 1.06e-56 | 197 |
MS.gene50704.t1 | MTR_7g082270 | 32.864 | 426 | 244 | 12 | 10 | 425 | 47 | 440 | 1.43e-55 | 193 |
MS.gene50704.t1 | MTR_5g006070 | 30.713 | 407 | 258 | 6 | 81 | 483 | 49 | 435 | 6.55e-55 | 192 |
MS.gene50704.t1 | MTR_8g102860 | 30.346 | 491 | 294 | 12 | 26 | 491 | 26 | 493 | 1.32e-54 | 192 |
MS.gene50704.t1 | MTR_1g104770 | 28.016 | 489 | 308 | 9 | 31 | 493 | 27 | 497 | 2.65e-54 | 191 |
MS.gene50704.t1 | MTR_8g102860 | 31.250 | 416 | 259 | 7 | 81 | 491 | 48 | 441 | 2.60e-53 | 187 |
MS.gene50704.t1 | MTR_1g038600 | 31.144 | 472 | 289 | 11 | 31 | 491 | 27 | 473 | 9.25e-53 | 186 |
MS.gene50704.t1 | MTR_8g077310 | 27.549 | 461 | 306 | 6 | 30 | 487 | 50 | 485 | 1.14e-52 | 186 |
MS.gene50704.t1 | MTR_5g020270 | 29.067 | 461 | 299 | 8 | 30 | 487 | 53 | 488 | 1.84e-52 | 186 |
MS.gene50704.t1 | MTR_2g048720 | 33.616 | 354 | 211 | 6 | 23 | 370 | 22 | 357 | 2.07e-52 | 187 |
MS.gene50704.t1 | MTR_3g074270 | 29.253 | 482 | 282 | 11 | 31 | 491 | 27 | 470 | 5.85e-52 | 184 |
MS.gene50704.t1 | MTR_3g074390 | 28.512 | 484 | 304 | 10 | 31 | 491 | 32 | 496 | 7.50e-52 | 184 |
MS.gene50704.t1 | MTR_1g038630 | 29.857 | 489 | 291 | 11 | 31 | 491 | 27 | 491 | 1.04e-51 | 184 |
MS.gene50704.t1 | MTR_0204s0020 | 28.247 | 485 | 304 | 10 | 29 | 493 | 24 | 484 | 1.23e-51 | 183 |
MS.gene50704.t1 | MTR_1g104750 | 27.368 | 475 | 305 | 8 | 31 | 483 | 27 | 483 | 2.92e-51 | 182 |
MS.gene50704.t1 | MTR_0204s0020 | 28.216 | 482 | 305 | 10 | 29 | 493 | 24 | 481 | 8.37e-51 | 181 |
MS.gene50704.t1 | MTR_6g087040 | 27.902 | 491 | 304 | 13 | 26 | 491 | 28 | 493 | 1.33e-50 | 181 |
MS.gene50704.t1 | MTR_6g088375 | 27.902 | 491 | 304 | 13 | 26 | 491 | 28 | 493 | 1.33e-50 | 181 |
MS.gene50704.t1 | MTR_2g026160 | 30.691 | 391 | 257 | 5 | 1 | 387 | 1 | 381 | 2.06e-50 | 182 |
MS.gene50704.t1 | MTR_2g026160 | 40.659 | 91 | 54 | 0 | 394 | 484 | 463 | 553 | 4.03e-14 | 75.5 |
MS.gene50704.t1 | MTR_3g023480 | 31.517 | 422 | 257 | 10 | 79 | 493 | 94 | 490 | 3.03e-50 | 180 |
MS.gene50704.t1 | MTR_8g077300 | 27.742 | 465 | 300 | 9 | 30 | 487 | 42 | 477 | 3.40e-50 | 179 |
MS.gene50704.t1 | MTR_5g020270 | 30.583 | 412 | 258 | 8 | 79 | 487 | 2 | 388 | 1.36e-49 | 175 |
MS.gene50704.t1 | MTR_0204s0040 | 28.302 | 477 | 298 | 10 | 29 | 483 | 32 | 486 | 2.06e-49 | 177 |
MS.gene50704.t1 | MTR_7g113970 | 28.166 | 458 | 302 | 6 | 32 | 489 | 67 | 497 | 2.34e-49 | 177 |
MS.gene50704.t1 | MTR_1g104780 | 28.571 | 476 | 295 | 8 | 33 | 483 | 28 | 483 | 2.63e-49 | 177 |
MS.gene50704.t1 | MTR_3g008170 | 27.912 | 498 | 317 | 12 | 18 | 491 | 13 | 492 | 5.48e-49 | 176 |
MS.gene50704.t1 | MTR_3g008160 | 26.186 | 485 | 314 | 10 | 31 | 493 | 27 | 489 | 6.33e-49 | 176 |
MS.gene50704.t1 | MTR_5g094760 | 26.901 | 513 | 332 | 10 | 1 | 493 | 1 | 490 | 6.80e-49 | 176 |
MS.gene50704.t1 | MTR_1g022315 | 27.197 | 478 | 318 | 8 | 15 | 487 | 36 | 488 | 7.82e-49 | 176 |
MS.gene50704.t1 | MTR_4g116770 | 28.512 | 477 | 297 | 11 | 29 | 483 | 228 | 682 | 3.43e-48 | 177 |
MS.gene50704.t1 | MTR_4g090600 | 28.571 | 490 | 294 | 12 | 26 | 484 | 22 | 486 | 3.97e-48 | 174 |
MS.gene50704.t1 | MTR_8g077310 | 28.155 | 412 | 268 | 6 | 79 | 487 | 2 | 388 | 4.62e-48 | 171 |
MS.gene50704.t1 | MTR_5g082540 | 29.423 | 503 | 305 | 13 | 16 | 491 | 12 | 491 | 6.20e-48 | 174 |
MS.gene50704.t1 | MTR_4g118610 | 28.509 | 456 | 292 | 8 | 38 | 489 | 63 | 488 | 7.63e-48 | 173 |
MS.gene50704.t1 | MTR_3g008160 | 27.098 | 417 | 280 | 6 | 79 | 493 | 46 | 440 | 9.62e-48 | 172 |
MS.gene50704.t1 | MTR_4g091370 | 27.607 | 489 | 300 | 11 | 26 | 484 | 22 | 486 | 1.51e-47 | 173 |
MS.gene50704.t1 | MTR_2g020710 | 28.352 | 455 | 284 | 8 | 38 | 484 | 60 | 480 | 1.90e-47 | 172 |
MS.gene50704.t1 | MTR_3g080240 | 29.487 | 468 | 288 | 12 | 32 | 489 | 98 | 533 | 2.15e-47 | 172 |
MS.gene50704.t1 | MTR_7g091690 | 27.290 | 513 | 330 | 10 | 1 | 493 | 1 | 490 | 2.66e-47 | 172 |
MS.gene50704.t1 | MTR_4g116790 | 28.866 | 485 | 301 | 10 | 29 | 493 | 30 | 490 | 4.04e-47 | 172 |
MS.gene50704.t1 | MTR_5g041550 | 27.308 | 509 | 306 | 13 | 17 | 493 | 16 | 492 | 5.81e-47 | 171 |
MS.gene50704.t1 | MTR_2g020710 | 29.216 | 421 | 256 | 8 | 72 | 484 | 5 | 391 | 6.10e-46 | 166 |
MS.gene50704.t1 | MTR_1g022315 | 28.571 | 413 | 266 | 7 | 79 | 487 | 2 | 389 | 2.34e-45 | 164 |
MS.gene50704.t1 | MTR_6g087910 | 29.839 | 496 | 301 | 13 | 1 | 484 | 23 | 483 | 5.26e-45 | 165 |
MS.gene50704.t1 | MTR_3g093060 | 29.250 | 400 | 255 | 8 | 92 | 484 | 61 | 439 | 9.33e-45 | 164 |
MS.gene50704.t1 | MTR_7g094450 | 28.603 | 451 | 281 | 11 | 43 | 484 | 52 | 470 | 1.18e-44 | 164 |
MS.gene50704.t1 | MTR_3g007910 | 26.931 | 505 | 305 | 11 | 17 | 502 | 15 | 474 | 5.94e-44 | 162 |
MS.gene50704.t1 | MTR_7g113960 | 26.058 | 449 | 303 | 6 | 38 | 486 | 38 | 457 | 1.73e-43 | 161 |
MS.gene50704.t1 | MTR_3g093010 | 25.859 | 495 | 312 | 11 | 31 | 493 | 26 | 497 | 2.13e-43 | 161 |
MS.gene50704.t1 | MTR_5g020270 | 27.253 | 466 | 280 | 9 | 30 | 487 | 53 | 467 | 1.28e-42 | 158 |
MS.gene50704.t1 | MTR_4g013205 | 29.412 | 459 | 288 | 8 | 32 | 484 | 41 | 469 | 3.03e-42 | 157 |
MS.gene50704.t1 | MTR_2g026140 | 30.352 | 369 | 225 | 7 | 33 | 397 | 30 | 370 | 5.17e-42 | 158 |
MS.gene50704.t1 | MTR_7g094110 | 29.330 | 433 | 277 | 10 | 55 | 486 | 70 | 474 | 9.14e-41 | 153 |
MS.gene50704.t1 | MTR_3g074380 | 29.714 | 350 | 208 | 9 | 31 | 361 | 30 | 360 | 6.17e-39 | 146 |
MS.gene50704.t1 | MTR_4g064820 | 30.707 | 368 | 218 | 11 | 23 | 367 | 88 | 441 | 2.81e-37 | 144 |
MS.gene50704.t1 | MTR_3g074370 | 30.514 | 331 | 191 | 8 | 173 | 491 | 21 | 324 | 4.45e-37 | 140 |
MS.gene50704.t1 | MTR_3g074340 | 30.514 | 331 | 191 | 8 | 173 | 491 | 21 | 324 | 4.58e-37 | 140 |
MS.gene50704.t1 | MTR_3g074320 | 30.395 | 329 | 194 | 7 | 173 | 491 | 21 | 324 | 4.77e-37 | 140 |
MS.gene50704.t1 | MTR_8g077310 | 27.273 | 341 | 224 | 4 | 30 | 370 | 50 | 366 | 2.87e-36 | 139 |
MS.gene50704.t1 | MTR_3g116060 | 36.019 | 211 | 133 | 2 | 25 | 234 | 2 | 211 | 1.67e-35 | 141 |
MS.gene50704.t1 | MTR_3g116060 | 29.804 | 255 | 161 | 7 | 257 | 501 | 484 | 730 | 8.31e-24 | 105 |
MS.gene50704.t1 | MTR_2g020710 | 27.249 | 389 | 242 | 7 | 33 | 413 | 55 | 410 | 4.44e-35 | 136 |
MS.gene50704.t1 | MTR_2g020710 | 27.320 | 388 | 241 | 7 | 33 | 412 | 55 | 409 | 6.23e-35 | 136 |
MS.gene50704.t1 | MTR_4g118610 | 27.532 | 385 | 246 | 7 | 33 | 413 | 58 | 413 | 1.98e-33 | 132 |
MS.gene50704.t1 | MTR_3g118530 | 38.647 | 207 | 113 | 6 | 38 | 236 | 15 | 215 | 2.61e-31 | 129 |
MS.gene50704.t1 | MTR_3g118530 | 30.973 | 226 | 136 | 5 | 269 | 483 | 507 | 723 | 4.83e-25 | 109 |
MS.gene50704.t1 | MTR_3g118530 | 38.647 | 207 | 113 | 6 | 38 | 236 | 15 | 215 | 4.72e-31 | 127 |
MS.gene50704.t1 | MTR_5g024740 | 35.784 | 204 | 123 | 5 | 31 | 229 | 8 | 208 | 9.64e-31 | 127 |
MS.gene50704.t1 | MTR_5g024740 | 29.167 | 240 | 149 | 5 | 256 | 483 | 475 | 705 | 3.10e-20 | 94.7 |
MS.gene50704.t1 | MTR_7g094110 | 27.315 | 432 | 267 | 10 | 55 | 486 | 70 | 454 | 1.33e-30 | 124 |
MS.gene50704.t1 | MTR_7g113970 | 25.948 | 343 | 229 | 4 | 32 | 374 | 67 | 384 | 2.32e-30 | 123 |
MS.gene50704.t1 | MTR_4g116790 | 25.217 | 345 | 220 | 6 | 29 | 354 | 30 | 355 | 2.87e-29 | 119 |
MS.gene50704.t1 | MTR_8g073100 | 35.294 | 204 | 124 | 5 | 31 | 229 | 8 | 208 | 2.91e-28 | 119 |
MS.gene50704.t1 | MTR_8g073100 | 29.075 | 227 | 145 | 3 | 266 | 483 | 482 | 701 | 3.97e-21 | 97.8 |
MS.gene50704.t1 | MTR_5g044910 | 31.683 | 202 | 134 | 4 | 31 | 229 | 8 | 208 | 1.96e-26 | 114 |
MS.gene50704.t1 | MTR_5g044910 | 29.412 | 238 | 147 | 5 | 258 | 483 | 475 | 703 | 2.86e-20 | 95.1 |
MS.gene50704.t1 | MTR_2g020710 | 26.347 | 334 | 206 | 6 | 33 | 358 | 55 | 356 | 2.67e-26 | 110 |
MS.gene50704.t1 | MTR_7g113960 | 24.036 | 337 | 231 | 4 | 38 | 374 | 38 | 349 | 4.54e-25 | 107 |
MS.gene50704.t1 | MTR_3g074400 | 26.525 | 377 | 231 | 9 | 79 | 455 | 45 | 375 | 9.18e-24 | 103 |
MS.gene50704.t1 | MTR_1g069935 | 23.729 | 472 | 254 | 18 | 80 | 486 | 84 | 514 | 3.26e-14 | 75.5 |
MS.gene50704.t1 | MTR_1g074940 | 24.229 | 454 | 255 | 18 | 80 | 480 | 83 | 500 | 4.04e-13 | 72.0 |
MS.gene50704.t1 | MTR_4g064807 | 42.667 | 75 | 43 | 0 | 411 | 485 | 3 | 77 | 4.16e-13 | 65.1 |
MS.gene50704.t1 | MTR_4g081490 | 24.146 | 410 | 264 | 17 | 80 | 482 | 66 | 435 | 1.64e-12 | 70.1 |
MS.gene50704.t1 | MTR_3g082700 | 23.932 | 468 | 249 | 20 | 80 | 480 | 84 | 511 | 8.51e-12 | 67.8 |
MS.gene50704.t1 | MTR_4g083960 | 22.418 | 455 | 279 | 14 | 77 | 484 | 78 | 505 | 9.15e-12 | 67.8 |
MS.gene50704.t1 | MTR_4g005090 | 23.721 | 430 | 280 | 13 | 79 | 482 | 81 | 488 | 3.32e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50704.t1 | AT3G18830 | 67.191 | 509 | 160 | 3 | 13 | 514 | 22 | 530 | 0.0 | 701 |
MS.gene50704.t1 | AT2G16130 | 64.198 | 486 | 171 | 2 | 20 | 502 | 19 | 504 | 0.0 | 637 |
MS.gene50704.t1 | AT2G16120 | 63.299 | 485 | 175 | 2 | 20 | 501 | 19 | 503 | 0.0 | 630 |
MS.gene50704.t1 | AT4G36670 | 57.839 | 472 | 197 | 1 | 18 | 487 | 8 | 479 | 0.0 | 563 |
MS.gene50704.t1 | AT2G18480 | 58.910 | 477 | 187 | 4 | 16 | 487 | 11 | 483 | 0.0 | 540 |
MS.gene50704.t1 | AT2G20780 | 47.485 | 497 | 235 | 5 | 19 | 514 | 47 | 518 | 1.87e-158 | 461 |
MS.gene50704.t1 | AT2G20780 | 47.609 | 460 | 215 | 5 | 56 | 514 | 26 | 460 | 3.52e-143 | 420 |
MS.gene50704.t1 | AT2G43330 | 32.470 | 502 | 312 | 8 | 14 | 503 | 16 | 502 | 4.19e-70 | 233 |
MS.gene50704.t1 | AT5G16150 | 32.675 | 456 | 276 | 8 | 33 | 484 | 111 | 539 | 2.37e-62 | 213 |
MS.gene50704.t1 | AT5G16150 | 32.675 | 456 | 276 | 8 | 33 | 484 | 111 | 539 | 2.37e-62 | 213 |
MS.gene50704.t1 | AT5G16150 | 32.675 | 456 | 276 | 8 | 33 | 484 | 111 | 539 | 2.37e-62 | 213 |
MS.gene50704.t1 | AT5G59250 | 29.854 | 479 | 282 | 11 | 32 | 484 | 103 | 553 | 1.91e-59 | 206 |
MS.gene50704.t1 | AT5G17010 | 30.754 | 504 | 296 | 15 | 10 | 484 | 20 | 499 | 3.70e-59 | 204 |
MS.gene50704.t1 | AT5G17010 | 30.754 | 504 | 296 | 15 | 10 | 484 | 20 | 499 | 3.70e-59 | 204 |
MS.gene50704.t1 | AT5G17010 | 30.754 | 504 | 296 | 15 | 10 | 484 | 20 | 499 | 3.70e-59 | 204 |
MS.gene50704.t1 | AT1G50310 | 29.209 | 493 | 300 | 12 | 26 | 493 | 24 | 492 | 9.67e-59 | 203 |
MS.gene50704.t1 | AT5G26340 | 29.363 | 487 | 298 | 11 | 31 | 493 | 27 | 491 | 2.58e-57 | 199 |
MS.gene50704.t1 | AT3G03090 | 30.983 | 468 | 288 | 9 | 32 | 484 | 52 | 499 | 4.82e-57 | 198 |
MS.gene50704.t1 | AT3G19940 | 29.697 | 495 | 294 | 13 | 26 | 493 | 24 | 491 | 2.49e-56 | 196 |
MS.gene50704.t1 | AT3G05960 | 28.687 | 495 | 304 | 9 | 17 | 486 | 11 | 481 | 5.03e-54 | 190 |
MS.gene50704.t1 | AT5G26250 | 28.776 | 490 | 301 | 10 | 30 | 493 | 25 | 492 | 5.13e-54 | 190 |
MS.gene50704.t1 | AT3G05150 | 28.513 | 491 | 303 | 9 | 17 | 495 | 21 | 475 | 1.32e-53 | 188 |
MS.gene50704.t1 | AT3G05150 | 28.542 | 480 | 297 | 8 | 17 | 484 | 21 | 466 | 1.85e-53 | 187 |
MS.gene50704.t1 | AT3G05150 | 28.542 | 480 | 297 | 8 | 17 | 484 | 21 | 466 | 1.85e-53 | 187 |
MS.gene50704.t1 | AT5G27360 | 27.935 | 494 | 317 | 11 | 10 | 495 | 11 | 473 | 2.32e-53 | 187 |
MS.gene50704.t1 | AT5G27360 | 27.789 | 493 | 317 | 11 | 10 | 494 | 59 | 520 | 5.42e-53 | 188 |
MS.gene50704.t1 | AT5G27350 | 28.340 | 494 | 313 | 11 | 1 | 486 | 3 | 463 | 5.75e-53 | 186 |
MS.gene50704.t1 | AT1G30220 | 34.203 | 345 | 210 | 4 | 23 | 363 | 24 | 355 | 7.47e-53 | 189 |
MS.gene50704.t1 | AT1G30220 | 38.462 | 91 | 56 | 0 | 394 | 484 | 463 | 553 | 8.23e-13 | 71.2 |
MS.gene50704.t1 | AT1G54730 | 30.022 | 453 | 286 | 7 | 38 | 488 | 43 | 466 | 9.71e-53 | 186 |
MS.gene50704.t1 | AT1G11260 | 27.621 | 496 | 311 | 11 | 22 | 492 | 18 | 490 | 2.72e-52 | 186 |
MS.gene50704.t1 | AT3G19930 | 28.161 | 522 | 313 | 14 | 1 | 491 | 1 | 491 | 2.81e-52 | 186 |
MS.gene50704.t1 | AT3G19930 | 28.161 | 522 | 313 | 14 | 1 | 491 | 1 | 491 | 2.81e-52 | 186 |
MS.gene50704.t1 | AT1G75220 | 28.139 | 462 | 304 | 7 | 29 | 487 | 50 | 486 | 3.55e-52 | 185 |
MS.gene50704.t1 | AT1G34580 | 28.893 | 488 | 300 | 11 | 31 | 491 | 28 | 495 | 8.25e-52 | 184 |
MS.gene50704.t1 | AT1G34580 | 30.238 | 420 | 267 | 8 | 79 | 491 | 45 | 445 | 1.87e-51 | 182 |
MS.gene50704.t1 | AT5G23270 | 29.191 | 507 | 307 | 13 | 16 | 495 | 13 | 494 | 2.34e-51 | 183 |
MS.gene50704.t1 | AT5G18840 | 27.846 | 492 | 310 | 9 | 8 | 484 | 14 | 475 | 3.16e-51 | 182 |
MS.gene50704.t1 | AT4G02050 | 27.778 | 504 | 323 | 10 | 18 | 499 | 18 | 502 | 2.06e-50 | 181 |
MS.gene50704.t1 | AT4G02050 | 27.778 | 504 | 323 | 10 | 18 | 499 | 18 | 502 | 2.06e-50 | 181 |
MS.gene50704.t1 | AT1G19450 | 28.448 | 464 | 300 | 7 | 29 | 487 | 51 | 487 | 6.79e-50 | 179 |
MS.gene50704.t1 | AT4G04750 | 27.231 | 437 | 289 | 8 | 55 | 489 | 64 | 473 | 1.49e-48 | 175 |
MS.gene50704.t1 | AT4G04750 | 27.231 | 437 | 289 | 8 | 55 | 489 | 64 | 473 | 1.49e-48 | 175 |
MS.gene50704.t1 | AT1G05030 | 30.435 | 460 | 282 | 9 | 33 | 484 | 85 | 514 | 1.72e-48 | 176 |
MS.gene50704.t1 | AT4G04750 | 27.231 | 437 | 289 | 8 | 55 | 489 | 108 | 517 | 2.37e-48 | 175 |
MS.gene50704.t1 | AT3G05165 | 27.536 | 483 | 316 | 12 | 10 | 486 | 8 | 462 | 3.50e-48 | 173 |
MS.gene50704.t1 | AT3G05165 | 27.536 | 483 | 316 | 12 | 10 | 486 | 8 | 462 | 3.50e-48 | 173 |
MS.gene50704.t1 | AT3G05165 | 27.536 | 483 | 316 | 12 | 10 | 486 | 8 | 462 | 3.50e-48 | 173 |
MS.gene50704.t1 | AT1G77210 | 27.495 | 491 | 306 | 13 | 26 | 493 | 28 | 491 | 1.99e-47 | 172 |
MS.gene50704.t1 | AT1G77210 | 27.495 | 491 | 306 | 13 | 26 | 493 | 28 | 491 | 1.99e-47 | 172 |
MS.gene50704.t1 | AT3G05160 | 27.061 | 473 | 314 | 8 | 18 | 486 | 8 | 453 | 2.02e-47 | 171 |
MS.gene50704.t1 | AT4G04760 | 27.742 | 465 | 298 | 9 | 32 | 489 | 36 | 469 | 5.87e-47 | 170 |
MS.gene50704.t1 | AT1G08930 | 26.667 | 480 | 314 | 11 | 19 | 489 | 43 | 493 | 7.07e-47 | 171 |
MS.gene50704.t1 | AT1G08930 | 26.667 | 480 | 314 | 11 | 19 | 489 | 43 | 493 | 7.07e-47 | 171 |
MS.gene50704.t1 | AT2G48020 | 27.564 | 468 | 308 | 8 | 19 | 484 | 20 | 458 | 1.73e-46 | 169 |
MS.gene50704.t1 | AT2G48020 | 27.564 | 468 | 308 | 8 | 19 | 484 | 20 | 458 | 1.73e-46 | 169 |
MS.gene50704.t1 | AT2G35740 | 31.778 | 343 | 216 | 6 | 31 | 367 | 30 | 360 | 2.30e-46 | 171 |
MS.gene50704.t1 | AT2G35740 | 40.659 | 91 | 54 | 0 | 394 | 484 | 466 | 556 | 1.14e-13 | 73.9 |
MS.gene50704.t1 | AT4G04760 | 27.955 | 440 | 279 | 9 | 57 | 489 | 2 | 410 | 5.43e-46 | 166 |
MS.gene50704.t1 | AT1G50310 | 31.593 | 364 | 220 | 10 | 135 | 493 | 10 | 349 | 7.36e-46 | 165 |
MS.gene50704.t1 | AT1G07340 | 28.926 | 484 | 286 | 12 | 30 | 483 | 26 | 481 | 5.72e-45 | 165 |
MS.gene50704.t1 | AT1G54730 | 28.160 | 451 | 276 | 8 | 38 | 488 | 43 | 445 | 7.76e-45 | 164 |
MS.gene50704.t1 | AT4G21480 | 27.539 | 512 | 312 | 15 | 16 | 495 | 11 | 495 | 1.17e-44 | 164 |
MS.gene50704.t1 | AT1G08890 | 27.083 | 480 | 314 | 10 | 18 | 490 | 13 | 463 | 1.54e-44 | 163 |
MS.gene50704.t1 | AT1G54730 | 29.064 | 406 | 258 | 6 | 38 | 441 | 43 | 420 | 4.47e-44 | 161 |
MS.gene50704.t1 | AT4G16480 | 30.499 | 341 | 223 | 5 | 31 | 367 | 31 | 361 | 1.35e-43 | 163 |
MS.gene50704.t1 | AT4G16480 | 40.659 | 91 | 54 | 0 | 394 | 484 | 467 | 557 | 1.41e-14 | 77.0 |
MS.gene50704.t1 | AT4G16480 | 30.499 | 341 | 223 | 5 | 31 | 367 | 31 | 361 | 1.35e-43 | 163 |
MS.gene50704.t1 | AT4G16480 | 40.659 | 91 | 54 | 0 | 394 | 484 | 467 | 557 | 1.41e-14 | 77.0 |
MS.gene50704.t1 | AT4G16480 | 30.499 | 341 | 223 | 5 | 31 | 367 | 31 | 361 | 1.35e-43 | 163 |
MS.gene50704.t1 | AT4G16480 | 40.659 | 91 | 54 | 0 | 394 | 484 | 467 | 557 | 1.41e-14 | 77.0 |
MS.gene50704.t1 | AT3G05160 | 27.674 | 430 | 284 | 7 | 57 | 486 | 2 | 404 | 3.23e-43 | 159 |
MS.gene50704.t1 | AT3G05160 | 27.674 | 430 | 284 | 7 | 57 | 486 | 2 | 404 | 3.23e-43 | 159 |
MS.gene50704.t1 | AT1G05030 | 29.596 | 446 | 276 | 9 | 47 | 484 | 47 | 462 | 3.37e-43 | 160 |
MS.gene50704.t1 | AT1G67300 | 29.221 | 462 | 288 | 11 | 32 | 484 | 56 | 487 | 3.92e-43 | 160 |
MS.gene50704.t1 | AT3G05155 | 25.207 | 484 | 330 | 10 | 3 | 484 | 2 | 455 | 5.04e-43 | 159 |
MS.gene50704.t1 | AT1G79820 | 29.935 | 461 | 283 | 13 | 32 | 484 | 59 | 487 | 6.39e-43 | 159 |
MS.gene50704.t1 | AT1G79820 | 29.935 | 461 | 283 | 13 | 32 | 484 | 59 | 487 | 6.39e-43 | 159 |
MS.gene50704.t1 | AT5G61520 | 27.381 | 504 | 305 | 17 | 22 | 493 | 19 | 493 | 1.30e-41 | 156 |
MS.gene50704.t1 | AT3G05400 | 27.473 | 455 | 299 | 9 | 38 | 490 | 37 | 462 | 1.40e-41 | 155 |
MS.gene50704.t1 | AT1G08900 | 27.828 | 442 | 290 | 9 | 50 | 490 | 40 | 453 | 4.06e-41 | 154 |
MS.gene50704.t1 | AT1G67300 | 28.942 | 463 | 287 | 12 | 32 | 484 | 56 | 486 | 7.88e-41 | 154 |
MS.gene50704.t1 | AT1G67300 | 28.942 | 463 | 287 | 12 | 32 | 484 | 56 | 486 | 7.88e-41 | 154 |
MS.gene50704.t1 | AT5G27360 | 27.638 | 398 | 256 | 9 | 99 | 495 | 3 | 369 | 9.15e-41 | 151 |
MS.gene50704.t1 | AT5G27360 | 27.638 | 398 | 256 | 9 | 99 | 495 | 3 | 369 | 9.15e-41 | 151 |
MS.gene50704.t1 | AT1G08900 | 27.533 | 454 | 300 | 9 | 38 | 490 | 36 | 461 | 1.47e-40 | 152 |
MS.gene50704.t1 | AT1G08900 | 27.533 | 454 | 300 | 9 | 38 | 490 | 36 | 461 | 1.47e-40 | 152 |
MS.gene50704.t1 | AT1G08900 | 27.689 | 437 | 287 | 9 | 55 | 490 | 11 | 419 | 1.60e-40 | 151 |
MS.gene50704.t1 | AT5G61520 | 27.446 | 419 | 274 | 11 | 79 | 493 | 53 | 445 | 3.54e-39 | 149 |
MS.gene50704.t1 | AT4G04760 | 26.667 | 465 | 300 | 10 | 32 | 489 | 36 | 466 | 4.38e-39 | 149 |
MS.gene50704.t1 | AT5G27360 | 26.190 | 420 | 275 | 9 | 10 | 421 | 11 | 403 | 9.15e-39 | 147 |
MS.gene50704.t1 | AT3G05165 | 27.700 | 426 | 272 | 12 | 10 | 429 | 8 | 403 | 2.03e-38 | 147 |
MS.gene50704.t1 | AT3G05165 | 27.700 | 426 | 272 | 12 | 10 | 429 | 8 | 403 | 2.03e-38 | 147 |
MS.gene50704.t1 | AT3G05165 | 26.712 | 438 | 288 | 10 | 10 | 441 | 8 | 418 | 4.12e-38 | 146 |
MS.gene50704.t1 | AT1G54730 | 28.042 | 378 | 242 | 6 | 38 | 413 | 43 | 392 | 8.53e-38 | 144 |
MS.gene50704.t1 | AT1G54730 | 28.042 | 378 | 242 | 6 | 38 | 413 | 43 | 392 | 8.53e-38 | 144 |
MS.gene50704.t1 | AT1G67300 | 29.126 | 412 | 250 | 12 | 32 | 433 | 56 | 435 | 2.60e-37 | 143 |
MS.gene50704.t1 | AT1G67300 | 29.126 | 412 | 250 | 12 | 32 | 433 | 56 | 435 | 2.60e-37 | 143 |
MS.gene50704.t1 | AT1G79820 | 29.730 | 407 | 252 | 11 | 32 | 433 | 59 | 436 | 4.63e-37 | 142 |
MS.gene50704.t1 | AT3G05400 | 29.144 | 374 | 234 | 9 | 119 | 490 | 98 | 442 | 6.51e-37 | 142 |
MS.gene50704.t1 | AT1G67300 | 29.032 | 403 | 244 | 12 | 32 | 424 | 56 | 426 | 1.07e-36 | 141 |
MS.gene50704.t1 | AT1G67300 | 29.032 | 403 | 244 | 12 | 32 | 424 | 56 | 426 | 1.07e-36 | 141 |
MS.gene50704.t1 | AT1G54730 | 26.980 | 404 | 248 | 7 | 38 | 441 | 43 | 399 | 2.36e-36 | 140 |
MS.gene50704.t1 | AT1G20840 | 38.426 | 216 | 121 | 5 | 25 | 234 | 2 | 211 | 4.61e-36 | 143 |
MS.gene50704.t1 | AT1G20840 | 28.958 | 259 | 162 | 7 | 257 | 503 | 486 | 734 | 4.81e-19 | 91.3 |
MS.gene50704.t1 | AT1G20840 | 38.426 | 216 | 121 | 5 | 25 | 234 | 2 | 211 | 4.61e-36 | 143 |
MS.gene50704.t1 | AT1G20840 | 28.958 | 259 | 162 | 7 | 257 | 503 | 486 | 734 | 4.81e-19 | 91.3 |
MS.gene50704.t1 | AT5G17010 | 25.904 | 498 | 268 | 14 | 10 | 484 | 17 | 436 | 1.06e-35 | 138 |
MS.gene50704.t1 | AT3G51490 | 36.404 | 228 | 134 | 6 | 31 | 252 | 8 | 230 | 1.17e-35 | 142 |
MS.gene50704.t1 | AT3G51490 | 30.802 | 237 | 146 | 5 | 269 | 499 | 500 | 724 | 1.18e-20 | 96.3 |
MS.gene50704.t1 | AT3G51490 | 36.404 | 228 | 134 | 6 | 31 | 252 | 8 | 230 | 1.19e-35 | 142 |
MS.gene50704.t1 | AT3G51490 | 31.535 | 241 | 147 | 4 | 269 | 499 | 500 | 732 | 1.64e-24 | 108 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 7.31e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.799 | 239 | 147 | 4 | 268 | 497 | 495 | 726 | 1.15e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 7.31e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.799 | 239 | 147 | 4 | 268 | 497 | 495 | 726 | 1.15e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 7.31e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.799 | 239 | 147 | 4 | 268 | 497 | 495 | 726 | 1.15e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 8.52e-35 | 139 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 505 | 738 | 1.30e-22 | 102 |
MS.gene50704.t1 | AT1G77210 | 26.331 | 357 | 238 | 8 | 139 | 493 | 9 | 342 | 6.15e-34 | 132 |
MS.gene50704.t1 | AT3G20460 | 25.336 | 446 | 304 | 9 | 42 | 486 | 68 | 485 | 3.71e-31 | 126 |
MS.gene50704.t1 | AT1G08920 | 25.383 | 457 | 298 | 11 | 38 | 486 | 43 | 464 | 6.51e-31 | 125 |
MS.gene50704.t1 | AT1G54730 | 25.798 | 376 | 232 | 7 | 38 | 413 | 43 | 371 | 2.61e-30 | 122 |
MS.gene50704.t1 | AT1G54730 | 27.215 | 316 | 205 | 4 | 38 | 353 | 43 | 333 | 3.89e-30 | 120 |
MS.gene50704.t1 | AT3G51490 | 38.235 | 170 | 102 | 3 | 84 | 252 | 13 | 180 | 5.50e-30 | 124 |
MS.gene50704.t1 | AT3G51490 | 31.535 | 241 | 147 | 4 | 269 | 499 | 450 | 682 | 1.51e-24 | 108 |
MS.gene50704.t1 | AT1G08900 | 26.420 | 405 | 270 | 8 | 38 | 441 | 36 | 413 | 2.54e-29 | 120 |
MS.gene50704.t1 | AT2G48020 | 26.496 | 351 | 233 | 5 | 20 | 370 | 21 | 346 | 5.81e-29 | 118 |
MS.gene50704.t1 | AT1G08920 | 25.000 | 464 | 298 | 12 | 38 | 486 | 43 | 471 | 2.54e-28 | 118 |
MS.gene50704.t1 | AT1G54730 | 26.871 | 294 | 193 | 4 | 38 | 330 | 43 | 315 | 1.56e-26 | 110 |
MS.gene50704.t1 | AT1G54730 | 26.871 | 294 | 193 | 4 | 38 | 330 | 43 | 315 | 1.56e-26 | 110 |
MS.gene50704.t1 | AT2G48020 | 25.595 | 336 | 225 | 5 | 20 | 355 | 21 | 331 | 7.67e-26 | 108 |
MS.gene50704.t1 | AT3G05155 | 24.646 | 353 | 235 | 9 | 3 | 353 | 2 | 325 | 1.86e-24 | 104 |
MS.gene50704.t1 | AT1G08920 | 25.750 | 400 | 252 | 11 | 38 | 429 | 43 | 405 | 4.44e-23 | 102 |
MS.gene50704.t1 | AT4G35300 | 31.535 | 241 | 149 | 4 | 268 | 499 | 308 | 541 | 1.03e-22 | 102 |
MS.gene50704.t1 | AT5G43340 | 24.236 | 458 | 260 | 16 | 79 | 486 | 84 | 504 | 4.36e-18 | 87.8 |
MS.gene50704.t1 | AT1G79820 | 30.049 | 203 | 132 | 4 | 32 | 229 | 59 | 256 | 5.71e-18 | 87.0 |
MS.gene50704.t1 | AT1G79820 | 34.667 | 150 | 88 | 3 | 338 | 484 | 297 | 439 | 4.14e-13 | 72.0 |
MS.gene50704.t1 | AT1G79820 | 34.667 | 150 | 88 | 3 | 338 | 484 | 235 | 377 | 4.00e-13 | 71.6 |
MS.gene50704.t1 | AT1G73220 | 28.455 | 369 | 195 | 17 | 77 | 425 | 147 | 466 | 2.51e-12 | 69.7 |
MS.gene50704.t1 | AT5G43350 | 22.458 | 472 | 262 | 18 | 80 | 486 | 84 | 516 | 1.92e-11 | 67.0 |
MS.gene50704.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 2.77e-11 | 66.2 |
MS.gene50704.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 2.77e-11 | 66.2 |
MS.gene50704.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 2.77e-11 | 66.2 |
MS.gene50704.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 2.77e-11 | 66.2 |
MS.gene50704.t1 | AT2G38940 | 22.363 | 474 | 259 | 19 | 80 | 485 | 84 | 516 | 4.41e-11 | 65.9 |
Find 146 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAAATCTCTTGAGGATTT+TGG | 0.103175 | 4.3:-33755752 | MS.gene50704:CDS |
GAACTATAAACCCACGTAAT+TGG | 0.211453 | 4.3:+33753935 | None:intergenic |
CCCAGCCTTCTCAAAGATTC+TGG | 0.218841 | 4.3:+33754225 | None:intergenic |
TCAGCTGTGGCACTGGCTTT+TGG | 0.229121 | 4.3:+33753665 | None:intergenic |
ACAAGCAAACTTGTTCCTTT+TGG | 0.235091 | 4.3:+33755715 | None:intergenic |
TCTTGTCATTGGTGCTTAAC+TGG | 0.242911 | 4.3:+33753624 | None:intergenic |
CTTCGTCGGAGCTGTACTTA+TGG | 0.255389 | 4.3:-33755105 | MS.gene50704:CDS |
TTTGTACGTCTGTTACTTTA+AGG | 0.257223 | 4.3:+33755243 | None:intergenic |
GTTGGATACATTTCAAACTA+TGG | 0.273251 | 4.3:-33754643 | MS.gene50704:CDS |
CCCATAGGTTCTTACATTGC+AGG | 0.273558 | 4.3:-33755185 | MS.gene50704:CDS |
ATGTTTGGTCGTTTCTTTGC+TGG | 0.276505 | 4.3:-33755056 | MS.gene50704:CDS |
CCCTGTTATCTCTTTAATAT+CGG | 0.279960 | 4.3:+33754423 | None:intergenic |
TGCTTGTGCTTGTGCTATCT+TGG | 0.301856 | 4.3:-33755699 | MS.gene50704:CDS |
TTCGTCGGAGCTGTACTTAT+GGG | 0.313628 | 4.3:-33755104 | MS.gene50704:CDS |
GCCGATATTAAAGAGATAAC+AGG | 0.332161 | 4.3:-33754424 | MS.gene50704:CDS |
CTCGTTGCCAAGGGTCGATT+AGG | 0.345950 | 4.3:-33754508 | MS.gene50704:CDS |
ACTTCCATCCTACTTGGATA+TGG | 0.364246 | 4.3:-33755668 | MS.gene50704:intron |
CGAGCTCAAGGCGTGTCTAT+TGG | 0.367306 | 4.3:-33753890 | MS.gene50704:CDS |
AACATGAGAAATGCGTAGTT+TGG | 0.369762 | 4.3:+33755074 | None:intergenic |
AAGGGTCCTTTGGTAATCTA+TGG | 0.369891 | 4.3:-33753694 | MS.gene50704:CDS |
CCCTGCAATGTAAGAACCTA+TGG | 0.375747 | 4.3:+33755184 | None:intergenic |
CACTCCTTCAGCTGTGGCAC+TGG | 0.380110 | 4.3:+33753658 | None:intergenic |
AACTACGCATTTCTCATGTT+TGG | 0.380920 | 4.3:-33755071 | MS.gene50704:CDS |
GAAAACAGTGTTCGTCTTAG+TGG | 0.383926 | 4.3:-33754152 | MS.gene50704:CDS |
CTATTGGTGCAGTGGTGAAT+AGG | 0.386283 | 4.3:-33753874 | MS.gene50704:CDS |
TTCTTTGCTGGTGTTGGCAT+AGG | 0.388164 | 4.3:-33755044 | MS.gene50704:CDS |
CCCGCCAATGGTGATGGCCT+TGG | 0.392361 | 4.3:+33753811 | None:intergenic |
TCAAAGCTCCCACTCCGTTA+TGG | 0.394379 | 4.3:-33754616 | MS.gene50704:CDS |
AAAACATTGGAGGAAATAGA+AGG | 0.397984 | 4.3:-33753713 | MS.gene50704:CDS |
CACATCTTTATTGCCTCCCT+CGG | 0.408711 | 4.3:-33754301 | MS.gene50704:CDS |
TCGTTGCCAAGGGTCGATTA+GGG | 0.411244 | 4.3:-33754507 | MS.gene50704:CDS |
CCCAGAATCTTTGAGAAGGC+TGG | 0.421941 | 4.3:-33754226 | MS.gene50704:CDS |
TATGCAGCTACTTTCTCAAT+AGG | 0.423162 | 4.3:-33753965 | MS.gene50704:CDS |
GTTTCAGTCACAAAAGTTCA+AGG | 0.424464 | 4.3:-33754373 | MS.gene50704:CDS |
CACTTCTTTGCACAAGCCAC+TGG | 0.424604 | 4.3:-33754274 | MS.gene50704:CDS |
CCAGCCTTCTCAAAGATTCT+GGG | 0.429982 | 4.3:+33754226 | None:intergenic |
GGCTTCCCCTAATCGACCCT+TGG | 0.433452 | 4.3:+33754501 | None:intergenic |
CAATGGTGATGGCCTTGGAC+AGG | 0.433735 | 4.3:+33753816 | None:intergenic |
TCTATGACTTCCATCCTACT+TGG | 0.436140 | 4.3:-33755674 | MS.gene50704:CDS |
CGTTACACGATTGTTCTTGC+CGG | 0.436927 | 4.3:-33755137 | MS.gene50704:CDS |
GGTCGTTTCTTTGCTGGTGT+TGG | 0.442322 | 4.3:-33755050 | MS.gene50704:CDS |
GAGGAAATAGAAGGGTCCTT+TGG | 0.444344 | 4.3:-33753704 | MS.gene50704:CDS |
GAGACTTCAGATGTATAAAC+AGG | 0.455110 | 4.3:+33755002 | None:intergenic |
TCCAAGGCCATCACCATTGG+CGG | 0.458389 | 4.3:-33753812 | MS.gene50704:CDS |
CCAAGGCCATCACCATTGGC+GGG | 0.471375 | 4.3:-33753811 | MS.gene50704:CDS |
ACCTAGATGGCTCGTTGCCA+AGG | 0.471470 | 4.3:-33754518 | MS.gene50704:CDS |
CCATGCCCGAGTCACCTAGA+TGG | 0.474481 | 4.3:-33754531 | MS.gene50704:CDS |
TTCAGGTATTTCTGAATGGA+GGG | 0.481942 | 4.3:-33754672 | MS.gene50704:intron |
TCTTTGCTGGTGTTGGCATA+GGG | 0.483026 | 4.3:-33755043 | MS.gene50704:CDS |
TGGTGAATAGGGTCACGAGC+GGG | 0.488624 | 4.3:-33753862 | MS.gene50704:CDS |
GGAAGCCACGAGATGAAGTA+GGG | 0.490590 | 4.3:+33754979 | None:intergenic |
GTCCTCAAAAGAAGCCCAAA+AGG | 0.492436 | 4.3:-33755730 | MS.gene50704:CDS |
AAGAACCTATGGGAGAATAT+AGG | 0.496870 | 4.3:+33755195 | None:intergenic |
CCCTTGGCAACGAGCCATCT+AGG | 0.497077 | 4.3:+33754517 | None:intergenic |
CTTCTCGCAACTGTAGCTGT+TGG | 0.497312 | 4.3:-33754181 | MS.gene50704:CDS |
TATTGGTGCAGTGGTGAATA+GGG | 0.497898 | 4.3:-33753873 | MS.gene50704:CDS |
GCTACTTTCTCAATAGGATC+AGG | 0.500947 | 4.3:-33753959 | MS.gene50704:CDS |
CCGTTGAGGCTTCGAGCTCA+AGG | 0.502797 | 4.3:-33753902 | MS.gene50704:CDS |
AATAATCTCACTTCTGACAT+TGG | 0.504708 | 4.3:-33754068 | MS.gene50704:CDS |
ACATCTTTATTGCCTCCCTC+GGG | 0.507173 | 4.3:-33754300 | MS.gene50704:CDS |
AGTTGTAAAAGTCTTGTCAT+TGG | 0.509427 | 4.3:+33753613 | None:intergenic |
AAAGTCGTCGTCACAGTCCA+AGG | 0.510002 | 4.3:+33754396 | None:intergenic |
GGGAGACTTTCTGACTGGAT+TGG | 0.511368 | 4.3:-33755164 | MS.gene50704:CDS |
CGGGCATTGCAATTGTCGCA+TGG | 0.513240 | 4.3:-33753772 | MS.gene50704:CDS |
AGGAAGCCACGAGATGAAGT+AGG | 0.516243 | 4.3:+33754978 | None:intergenic |
AAGTTCAAGGCAAAGGCGTA+TGG | 0.516614 | 4.3:-33754360 | MS.gene50704:CDS |
TGACTCGGGCATGGTTAATA+CGG | 0.517149 | 4.3:+33754540 | None:intergenic |
CCATAGGTTCTTACATTGCA+GGG | 0.517766 | 4.3:-33755184 | MS.gene50704:CDS |
CTGTCCAAGGCCATCACCAT+TGG | 0.518207 | 4.3:-33753815 | MS.gene50704:CDS |
TATGGTTGGCGAGTGATGCT+TGG | 0.521262 | 4.3:-33754598 | MS.gene50704:CDS |
CCAGAATCTTTGAGAAGGCT+GGG | 0.523498 | 4.3:-33754225 | MS.gene50704:CDS |
AACGAGCCATCTAGGTGACT+CGG | 0.523691 | 4.3:+33754525 | None:intergenic |
GAAAGCCCCGCCAATGGTGA+TGG | 0.523822 | 4.3:+33753805 | None:intergenic |
TCCGTTCACTCCTTCAGCTG+TGG | 0.524294 | 4.3:+33753652 | None:intergenic |
TGGCGAGTGATGCTTGGAAT+CGG | 0.525279 | 4.3:-33754592 | MS.gene50704:CDS |
TTGCAGGGAGACTTTCTGAC+TGG | 0.530675 | 4.3:-33755169 | MS.gene50704:CDS |
TTTCAGGTATTTCTGAATGG+AGG | 0.531761 | 4.3:-33754673 | MS.gene50704:intron |
TGGTTAATACGGCCATAGCT+AGG | 0.533803 | 4.3:+33754551 | None:intergenic |
AATATCTGATTCTAAAGAAG+AGG | 0.533914 | 4.3:-33754461 | MS.gene50704:CDS |
GTACAAATTGAAGTTCTCCT+AGG | 0.535054 | 4.3:-33755227 | MS.gene50704:CDS |
AACAGTTCTGAAATCTCTTG+AGG | 0.536753 | 4.3:-33755759 | MS.gene50704:CDS |
TATTGAGAAAGTAGCTGCAT+AGG | 0.541536 | 4.3:+33753967 | None:intergenic |
CCCTTCTGTAATCCTAGCTA+TGG | 0.542279 | 4.3:-33754563 | MS.gene50704:CDS |
AAAGCCAGTGCCACAGCTGA+AGG | 0.545456 | 4.3:-33753662 | MS.gene50704:CDS |
TGTACTTACCATATCCAAGT+AGG | 0.548055 | 4.3:+33755660 | None:intergenic |
AGTCAAACGCCACACTGACA+TGG | 0.551806 | 4.3:-33754021 | MS.gene50704:CDS |
TTGTTGTTAACCAGTGTAGG+TGG | 0.554692 | 4.3:-33754094 | MS.gene50704:CDS |
CTTCCTCACTTCCTTGCCTG+AGG | 0.556736 | 4.3:-33754961 | MS.gene50704:intron |
AATGGTGATGGCCTTGGACA+GGG | 0.560610 | 4.3:+33753817 | None:intergenic |
ATAAAGATGTGACGAACTGC+AGG | 0.563031 | 4.3:+33754313 | None:intergenic |
AGCTAGGATTACAGAAGGGA+TGG | 0.568290 | 4.3:+33754567 | None:intergenic |
AATATAGGTTTATGATACCT+AGG | 0.569110 | 4.3:+33755210 | None:intergenic |
TCCGACGAAGAAAATCAAAC+CGG | 0.571001 | 4.3:+33755118 | None:intergenic |
GATTATTAACCCACCTACAC+TGG | 0.571276 | 4.3:+33754084 | None:intergenic |
AGCTCCCACTCCGTTATGGT+TGG | 0.571308 | 4.3:-33754612 | MS.gene50704:CDS |
GTCACAAAAGTTCAAGGCAA+AGG | 0.572137 | 4.3:-33754367 | MS.gene50704:CDS |
CCTTGAGCTCGAAGCCTCAA+CGG | 0.572753 | 4.3:+33753902 | None:intergenic |
AGAGATAACAGGGATCCCCT+TGG | 0.572972 | 4.3:-33754413 | MS.gene50704:CDS |
ATAAACCTATATTCTCCCAT+AGG | 0.576460 | 4.3:-33755200 | MS.gene50704:CDS |
CAAGGCCATCACCATTGGCG+GGG | 0.579010 | 4.3:-33753810 | MS.gene50704:CDS |
CCTAGATGGCTCGTTGCCAA+GGG | 0.580224 | 4.3:-33754517 | MS.gene50704:CDS |
GTTCTGAAATATTTCCGTTG+AGG | 0.582076 | 4.3:-33753916 | MS.gene50704:CDS |
CTTACCATATCCAAGTAGGA+TGG | 0.584589 | 4.3:+33755664 | None:intergenic |
GCCATAGCTAGGATTACAGA+AGG | 0.590270 | 4.3:+33754562 | None:intergenic |
CCTGCAATGTAAGAACCTAT+GGG | 0.590311 | 4.3:+33755185 | None:intergenic |
TAGAAAACTCACCTCAGGCA+AGG | 0.590516 | 4.3:+33754950 | None:intergenic |
AACACAAGGCAAAACATTGG+AGG | 0.590671 | 4.3:-33753723 | MS.gene50704:CDS |
TTTCCTCCATAGATTACCAA+AGG | 0.590920 | 4.3:+33753688 | None:intergenic |
TCACCTCAGGCAAGGAAGTG+AGG | 0.596017 | 4.3:+33754958 | None:intergenic |
TGAAACACAAGGCAAAACAT+TGG | 0.596171 | 4.3:-33753726 | MS.gene50704:CDS |
GCATCACTCGCCAACCATAA+CGG | 0.596474 | 4.3:+33754602 | None:intergenic |
AAGAAAGAAAGCCCCGCCAA+TGG | 0.598295 | 4.3:+33753799 | None:intergenic |
AAGTCGTCGTCACAGTCCAA+GGG | 0.598328 | 4.3:+33754397 | None:intergenic |
CCATCTAGGTGACTCGGGCA+TGG | 0.606151 | 4.3:+33754531 | None:intergenic |
GGACAGGGACAGAAAAGTCA+TGG | 0.607404 | 4.3:+33753832 | None:intergenic |
ACGAGCCATCTAGGTGACTC+GGG | 0.608653 | 4.3:+33754526 | None:intergenic |
GTCTCCCCTACTTCATCTCG+TGG | 0.611163 | 4.3:-33754984 | MS.gene50704:CDS |
TAGGATCAGGTCCAATTACG+TGG | 0.612410 | 4.3:-33753946 | MS.gene50704:CDS |
CTCGCCAACCATAACGGAGT+GGG | 0.613301 | 4.3:+33754608 | None:intergenic |
TGTTGTTAACCAGTGTAGGT+GGG | 0.615220 | 4.3:-33754093 | MS.gene50704:CDS |
GGTCCTTTGGTAATCTATGG+AGG | 0.620543 | 4.3:-33753691 | MS.gene50704:CDS |
GGTGAATAGGGTCACGAGCG+GGG | 0.623442 | 4.3:-33753861 | MS.gene50704:CDS |
GTCAAACGCCACACTGACAT+GGG | 0.626100 | 4.3:-33754020 | MS.gene50704:CDS |
TAGTCCCAGAATCTTTGAGA+AGG | 0.627740 | 4.3:-33754230 | MS.gene50704:CDS |
GAAGCCACGAGATGAAGTAG+GGG | 0.631896 | 4.3:+33754980 | None:intergenic |
CCGATATTAAAGAGATAACA+GGG | 0.632385 | 4.3:-33754423 | MS.gene50704:CDS |
ACAGATATTGGTGTGATGAG+TGG | 0.633157 | 4.3:-33755290 | MS.gene50704:intron |
GCCACAGCTGAAGGAGTGAA+CGG | 0.634020 | 4.3:-33753653 | MS.gene50704:CDS |
CGTTGCCAAGGGTCGATTAG+GGG | 0.634337 | 4.3:-33754506 | MS.gene50704:CDS |
AAACATTGGAGGAAATAGAA+GGG | 0.640963 | 4.3:-33753712 | MS.gene50704:CDS |
GTGTTGTTGTTAACCAGTGT+AGG | 0.645416 | 4.3:-33754097 | MS.gene50704:CDS |
ATGTGACGAACTGCAGGTGT+AGG | 0.646953 | 4.3:+33754319 | None:intergenic |
AGGCGTGTCTATTGGTGCAG+TGG | 0.650703 | 4.3:-33753882 | MS.gene50704:CDS |
AACAACAGCGTCTATGCCAG+TGG | 0.658909 | 4.3:+33754258 | None:intergenic |
TGCAAAGAAGTGAATCCCGA+GGG | 0.660277 | 4.3:+33754285 | None:intergenic |
AGGATCAGGTCCAATTACGT+GGG | 0.664159 | 4.3:-33753945 | MS.gene50704:CDS |
ATAAACAGGAGCAATCAAGA+AGG | 0.665096 | 4.3:+33755016 | None:intergenic |
CGAAATAGCCCATGTCAGTG+TGG | 0.673841 | 4.3:+33754012 | None:intergenic |
GTGCAAAGAAGTGAATCCCG+AGG | 0.683875 | 4.3:+33754284 | None:intergenic |
GTGGTGAATAGGGTCACGAG+CGG | 0.685586 | 4.3:-33753863 | MS.gene50704:CDS |
AGTCGTCGTCACAGTCCAAG+GGG | 0.687379 | 4.3:+33754398 | None:intergenic |
AAAGAAGTGAATCCCGAGGG+AGG | 0.688647 | 4.3:+33754288 | None:intergenic |
CCATAGCTAGGATTACAGAA+GGG | 0.691325 | 4.3:+33754563 | None:intergenic |
ACTCGCCAACCATAACGGAG+TGG | 0.709914 | 4.3:+33754607 | None:intergenic |
ACAACACGCGCCTCCCAACG+CGG | 0.715769 | 4.3:+33754113 | None:intergenic |
ACTATGCTCCCTGAAACACA+AGG | 0.725699 | 4.3:-33753737 | MS.gene50704:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAGTTAGAATAATATA+TGG | - | chr4.3:33753921-33753940 | MS.gene50704:CDS | 10.0% |
!!! | TATTTTATAAAGAACTTTTT+TGG | + | chr4.3:33754903-33754922 | None:intergenic | 10.0% |
!! | TATTGATAGAAATGAATTAA+TGG | + | chr4.3:33753758-33753777 | None:intergenic | 15.0% |
!! | ATAGAAATGAATTAATGGTA+TGG | + | chr4.3:33753753-33753772 | None:intergenic | 20.0% |
!! | ATCAAAAAAGAAGATTTCTT+AGG | - | chr4.3:33753782-33753801 | MS.gene50704:CDS | 20.0% |
!! | GTTATTATTGTAACAGATAT+TGG | - | chr4.3:33754078-33754097 | MS.gene50704:CDS | 20.0% |
!! | TGAAAATAACATGTCATTAA+TGG | + | chr4.3:33754692-33754711 | None:intergenic | 20.0% |
!!! | ATTAATGACATGTTATTTTC+AGG | - | chr4.3:33754691-33754710 | MS.gene50704:intron | 20.0% |
! | AAAAATCGTAATATCAACGA+CGG | + | chr4.3:33754495-33754514 | None:intergenic | 25.0% |
! | AATATAGGTTTATGATACCT+AGG | + | chr4.3:33754173-33754192 | None:intergenic | 25.0% |
! | CAAGAAAGAATAGAGATATA+AGG | - | chr4.3:33753871-33753890 | MS.gene50704:CDS | 25.0% |
! | TATAGCAACATTGATAAACA+TGG | + | chr4.3:33754655-33754674 | None:intergenic | 25.0% |
! | TCTTTCTTGTACAAACAAAT+GGG | + | chr4.3:33753860-33753879 | None:intergenic | 25.0% |
! | TTCTTTCTTGTACAAACAAA+TGG | + | chr4.3:33753861-33753880 | None:intergenic | 25.0% |
!! | AAGGTCTCTTTTTATATAGA+TGG | + | chr4.3:33754121-33754140 | None:intergenic | 25.0% |
!! | AATATCTGATTCTAAAGAAG+AGG | - | chr4.3:33754919-33754938 | MS.gene50704:intron | 25.0% |
!!! | TATTTTCAGGTATTTCTGAA+TGG | - | chr4.3:33754704-33754723 | MS.gene50704:intron | 25.0% |
AAAACATTGGAGGAAATAGA+AGG | - | chr4.3:33755667-33755686 | MS.gene50704:intron | 30.0% | |
AAAATTAGAAAACTCACCTC+AGG | + | chr4.3:33754438-33754457 | None:intergenic | 30.0% | |
AAACATTGGAGGAAATAGAA+GGG | - | chr4.3:33755668-33755687 | MS.gene50704:intron | 30.0% | |
AATAATCTCACTTCTGACAT+TGG | - | chr4.3:33755312-33755331 | MS.gene50704:intron | 30.0% | |
ATAAACCTATATTCTCCCAT+AGG | - | chr4.3:33754180-33754199 | MS.gene50704:CDS | 30.0% | |
CCCTGTTATCTCTTTAATAT+CGG | + | chr4.3:33754960-33754979 | None:intergenic | 30.0% | |
CCGATATTAAAGAGATAACA+GGG | - | chr4.3:33754957-33754976 | MS.gene50704:intron | 30.0% | |
GTTGGATACATTTCAAACTA+TGG | - | chr4.3:33754737-33754756 | MS.gene50704:intron | 30.0% | |
! | AGTTGTAAAAGTCTTGTCAT+TGG | + | chr4.3:33755770-33755789 | None:intergenic | 30.0% |
! | TGACAAGACTTTTACAACTA+CGG | - | chr4.3:33755771-33755790 | MS.gene50704:CDS | 30.0% |
!! | TTTGTACGTCTGTTACTTTA+AGG | + | chr4.3:33754140-33754159 | None:intergenic | 30.0% |
AACATGAGAAATGCGTAGTT+TGG | + | chr4.3:33754309-33754328 | None:intergenic | 35.0% | |
AACGCGGTCTAATAAAAAAG+TGG | + | chr4.3:33755254-33755273 | None:intergenic | 35.0% | |
AACTACGCATTTCTCATGTT+TGG | - | chr4.3:33754309-33754328 | MS.gene50704:CDS | 35.0% | |
AAGAACCTATGGGAGAATAT+AGG | + | chr4.3:33754188-33754207 | None:intergenic | 35.0% | |
ATAAACAGGAGCAATCAAGA+AGG | + | chr4.3:33754367-33754386 | None:intergenic | 35.0% | |
GAACTATAAACCCACGTAAT+TGG | + | chr4.3:33755448-33755467 | None:intergenic | 35.0% | |
GAGACTTCAGATGTATAAAC+AGG | + | chr4.3:33754381-33754400 | None:intergenic | 35.0% | |
GCCGATATTAAAGAGATAAC+AGG | - | chr4.3:33754956-33754975 | MS.gene50704:intron | 35.0% | |
GTACAAATTGAAGTTCTCCT+AGG | - | chr4.3:33754153-33754172 | MS.gene50704:CDS | 35.0% | |
GTTTCAGTCACAAAAGTTCA+AGG | - | chr4.3:33755007-33755026 | MS.gene50704:CDS | 35.0% | |
TATTGAGAAAGTAGCTGCAT+AGG | + | chr4.3:33755416-33755435 | None:intergenic | 35.0% | |
TGAAACACAAGGCAAAACAT+TGG | - | chr4.3:33755654-33755673 | MS.gene50704:intron | 35.0% | |
TGTACTTACCATATCCAAGT+AGG | + | chr4.3:33753723-33753742 | None:intergenic | 35.0% | |
TTTCCTCCATAGATTACCAA+AGG | + | chr4.3:33755695-33755714 | None:intergenic | 35.0% | |
! | AAACATGGATTTAGTTCAGC+TGG | + | chr4.3:33754640-33754659 | None:intergenic | 35.0% |
! | AATGTTTTGCCTTGTGTTTC+AGG | + | chr4.3:33755655-33755674 | None:intergenic | 35.0% |
! | ATGTTTTGCCTTGTGTTTCA+GGG | + | chr4.3:33755654-33755673 | None:intergenic | 35.0% |
! | CTGAAATCTCTTGAGGATTT+TGG | - | chr4.3:33753628-33753647 | MS.gene50704:CDS | 35.0% |
! | TATGCAGCTACTTTCTCAAT+AGG | - | chr4.3:33755415-33755434 | MS.gene50704:intron | 35.0% |
! | TTCAGGTATTTCTGAATGGA+GGG | - | chr4.3:33754708-33754727 | MS.gene50704:intron | 35.0% |
! | TTTCAGGTATTTCTGAATGG+AGG | - | chr4.3:33754707-33754726 | MS.gene50704:intron | 35.0% |
!! | AACAGTTCTGAAATCTCTTG+AGG | - | chr4.3:33753621-33753640 | MS.gene50704:CDS | 35.0% |
!! | ACAAGCAAACTTGTTCCTTT+TGG | + | chr4.3:33753668-33753687 | None:intergenic | 35.0% |
!! | CAAGCAAACTTGTTCCTTTT+GGG | + | chr4.3:33753667-33753686 | None:intergenic | 35.0% |
!! | GTTCTGAAATATTTCCGTTG+AGG | - | chr4.3:33755464-33755483 | MS.gene50704:intron | 35.0% |
!!! | ACTTTTTTATTAGACCGCGT+TGG | - | chr4.3:33755253-33755272 | MS.gene50704:CDS | 35.0% |
!!! | CTTTTTTATTAGACCGCGTT+GGG | - | chr4.3:33755254-33755273 | MS.gene50704:CDS | 35.0% |
AACACAAGGCAAAACATTGG+AGG | - | chr4.3:33755657-33755676 | MS.gene50704:intron | 40.0% | |
ACAGATATTGGTGTGATGAG+TGG | - | chr4.3:33754090-33754109 | MS.gene50704:CDS | 40.0% | |
ACTTCCATCCTACTTGGATA+TGG | - | chr4.3:33753712-33753731 | MS.gene50704:CDS | 40.0% | |
ATAAAGATGTGACGAACTGC+AGG | + | chr4.3:33755070-33755089 | None:intergenic | 40.0% | |
ATGTTTGGTCGTTTCTTTGC+TGG | - | chr4.3:33754324-33754343 | MS.gene50704:CDS | 40.0% | |
CCATAGCTAGGATTACAGAA+GGG | + | chr4.3:33754820-33754839 | None:intergenic | 40.0% | |
CCATAGGTTCTTACATTGCA+GGG | - | chr4.3:33754196-33754215 | MS.gene50704:CDS | 40.0% | |
CCTGCAATGTAAGAACCTAT+GGG | + | chr4.3:33754198-33754217 | None:intergenic | 40.0% | |
CTTACCATATCCAAGTAGGA+TGG | + | chr4.3:33753719-33753738 | None:intergenic | 40.0% | |
GAAAACAGTGTTCGTCTTAG+TGG | - | chr4.3:33755228-33755247 | MS.gene50704:CDS | 40.0% | |
GATTATTAACCCACCTACAC+TGG | + | chr4.3:33755299-33755318 | None:intergenic | 40.0% | |
GTCACAAAAGTTCAAGGCAA+AGG | - | chr4.3:33755013-33755032 | MS.gene50704:CDS | 40.0% | |
TATTGGTGCAGTGGTGAATA+GGG | - | chr4.3:33755507-33755526 | MS.gene50704:intron | 40.0% | |
TCCGACGAAGAAAATCAAAC+CGG | + | chr4.3:33754265-33754284 | None:intergenic | 40.0% | |
TCTATGACTTCCATCCTACT+TGG | - | chr4.3:33753706-33753725 | MS.gene50704:CDS | 40.0% | |
TGTTGTTAACCAGTGTAGGT+GGG | - | chr4.3:33755287-33755306 | MS.gene50704:CDS | 40.0% | |
! | AAGGGTCCTTTGGTAATCTA+TGG | - | chr4.3:33755686-33755705 | MS.gene50704:CDS | 40.0% |
! | GCTACTTTCTCAATAGGATC+AGG | - | chr4.3:33755421-33755440 | MS.gene50704:intron | 40.0% |
! | GTGTTGTTGTTAACCAGTGT+AGG | - | chr4.3:33755283-33755302 | MS.gene50704:CDS | 40.0% |
! | TAGTCCCAGAATCTTTGAGA+AGG | - | chr4.3:33755150-33755169 | MS.gene50704:CDS | 40.0% |
! | TCTTGTCATTGGTGCTTAAC+TGG | + | chr4.3:33755759-33755778 | None:intergenic | 40.0% |
! | TTCCTTTTGGGCTTCTTTTG+AGG | + | chr4.3:33753655-33753674 | None:intergenic | 40.0% |
! | TTGTTGTTAACCAGTGTAGG+TGG | - | chr4.3:33755286-33755305 | MS.gene50704:CDS | 40.0% |
!! | CTGAATGGAGGGATTTTAGT+TGG | - | chr4.3:33754719-33754738 | MS.gene50704:intron | 40.0% |
ACATCTTTATTGCCTCCCTC+GGG | - | chr4.3:33755080-33755099 | MS.gene50704:CDS | 45.0% | |
ACTATGCTCCCTGAAACACA+AGG | - | chr4.3:33755643-33755662 | MS.gene50704:intron | 45.0% | |
AGCTAGGATTACAGAAGGGA+TGG | + | chr4.3:33754816-33754835 | None:intergenic | 45.0% | |
AGGATCAGGTCCAATTACGT+GGG | - | chr4.3:33755435-33755454 | MS.gene50704:intron | 45.0% | |
CACATCTTTATTGCCTCCCT+CGG | - | chr4.3:33755079-33755098 | MS.gene50704:CDS | 45.0% | |
CCAGCCTTCTCAAAGATTCT+GGG | + | chr4.3:33755157-33755176 | None:intergenic | 45.0% | |
CCCATAGGTTCTTACATTGC+AGG | - | chr4.3:33754195-33754214 | MS.gene50704:CDS | 45.0% | |
CCCTGCAATGTAAGAACCTA+TGG | + | chr4.3:33754199-33754218 | None:intergenic | 45.0% | |
CCCTTCTGTAATCCTAGCTA+TGG | - | chr4.3:33754817-33754836 | MS.gene50704:intron | 45.0% | |
CGTTACACGATTGTTCTTGC+CGG | - | chr4.3:33754243-33754262 | MS.gene50704:CDS | 45.0% | |
CTATTGGTGCAGTGGTGAAT+AGG | - | chr4.3:33755506-33755525 | MS.gene50704:intron | 45.0% | |
GAGGAAATAGAAGGGTCCTT+TGG | - | chr4.3:33755676-33755695 | MS.gene50704:CDS | 45.0% | |
GCCATAGCTAGGATTACAGA+AGG | + | chr4.3:33754821-33754840 | None:intergenic | 45.0% | |
GTCCTCAAAAGAAGCCCAAA+AGG | - | chr4.3:33753650-33753669 | MS.gene50704:CDS | 45.0% | |
TAGAAAACTCACCTCAGGCA+AGG | + | chr4.3:33754433-33754452 | None:intergenic | 45.0% | |
TAGGATCAGGTCCAATTACG+TGG | - | chr4.3:33755434-33755453 | MS.gene50704:intron | 45.0% | |
TGCAAAGAAGTGAATCCCGA+GGG | + | chr4.3:33755098-33755117 | None:intergenic | 45.0% | |
TGCTTGTGCTTGTGCTATCT+TGG | - | chr4.3:33753681-33753700 | MS.gene50704:CDS | 45.0% | |
TGGTTAATACGGCCATAGCT+AGG | + | chr4.3:33754832-33754851 | None:intergenic | 45.0% | |
TTCGTCGGAGCTGTACTTAT+GGG | - | chr4.3:33754276-33754295 | MS.gene50704:CDS | 45.0% | |
! | AAGTTCAAGGCAAAGGCGTA+TGG | - | chr4.3:33755020-33755039 | MS.gene50704:CDS | 45.0% |
! | CCAGAATCTTTGAGAAGGCT+GGG | - | chr4.3:33755155-33755174 | MS.gene50704:CDS | 45.0% |
! | CGGGGCTTTCTTTCTTTTTG+CGG | - | chr4.3:33755588-33755607 | MS.gene50704:intron | 45.0% |
! | GGGGCTTTCTTTCTTTTTGC+GGG | - | chr4.3:33755589-33755608 | MS.gene50704:intron | 45.0% |
! | GGTCCTTTGGTAATCTATGG+AGG | - | chr4.3:33755689-33755708 | MS.gene50704:CDS | 45.0% |
! | TGACTCGGGCATGGTTAATA+CGG | + | chr4.3:33754843-33754862 | None:intergenic | 45.0% |
! | TTTTATTAGACCGCGTTGGG+AGG | - | chr4.3:33755257-33755276 | MS.gene50704:CDS | 45.0% |
!! | TCTTTGCTGGTGTTGGCATA+GGG | - | chr4.3:33754337-33754356 | MS.gene50704:CDS | 45.0% |
!! | TTCAGCTGGTTGATGATGAC+TGG | + | chr4.3:33754626-33754645 | None:intergenic | 45.0% |
!! | TTCTTTGCTGGTGTTGGCAT+AGG | - | chr4.3:33754336-33754355 | MS.gene50704:CDS | 45.0% |
!!! | GCCGGTTTGATTTTCTTCGT+CGG | - | chr4.3:33754261-33754280 | MS.gene50704:CDS | 45.0% |
AAAGAAGTGAATCCCGAGGG+AGG | + | chr4.3:33755095-33755114 | None:intergenic | 50.0% | |
AAAGTCGTCGTCACAGTCCA+AGG | + | chr4.3:33754987-33755006 | None:intergenic | 50.0% | |
AACAACAGCGTCTATGCCAG+TGG | + | chr4.3:33755125-33755144 | None:intergenic | 50.0% | |
AACGAGCCATCTAGGTGACT+CGG | + | chr4.3:33754858-33754877 | None:intergenic | 50.0% | |
AAGAAAGAAAGCCCCGCCAA+TGG | + | chr4.3:33755584-33755603 | None:intergenic | 50.0% | |
AAGTCGTCGTCACAGTCCAA+GGG | + | chr4.3:33754986-33755005 | None:intergenic | 50.0% | |
AGAGATAACAGGGATCCCCT+TGG | - | chr4.3:33754967-33754986 | MS.gene50704:CDS | 50.0% | |
AGGAAGCCACGAGATGAAGT+AGG | + | chr4.3:33754405-33754424 | None:intergenic | 50.0% | |
AGTCAAACGCCACACTGACA+TGG | - | chr4.3:33755359-33755378 | MS.gene50704:intron | 50.0% | |
ATGTGACGAACTGCAGGTGT+AGG | + | chr4.3:33755064-33755083 | None:intergenic | 50.0% | |
CACTTCTTTGCACAAGCCAC+TGG | - | chr4.3:33755106-33755125 | MS.gene50704:CDS | 50.0% | |
CCCAGCCTTCTCAAAGATTC+TGG | + | chr4.3:33755158-33755177 | None:intergenic | 50.0% | |
CGAAATAGCCCATGTCAGTG+TGG | + | chr4.3:33755371-33755390 | None:intergenic | 50.0% | |
CTTCGTCGGAGCTGTACTTA+TGG | - | chr4.3:33754275-33754294 | MS.gene50704:CDS | 50.0% | |
CTTCTCGCAACTGTAGCTGT+TGG | - | chr4.3:33755199-33755218 | MS.gene50704:CDS | 50.0% | |
GAAGCCACGAGATGAAGTAG+GGG | + | chr4.3:33754403-33754422 | None:intergenic | 50.0% | |
GCATCACTCGCCAACCATAA+CGG | + | chr4.3:33754781-33754800 | None:intergenic | 50.0% | |
GGAAGCCACGAGATGAAGTA+GGG | + | chr4.3:33754404-33754423 | None:intergenic | 50.0% | |
GGACAGGGACAGAAAAGTCA+TGG | + | chr4.3:33755551-33755570 | None:intergenic | 50.0% | |
GGGAGACTTTCTGACTGGAT+TGG | - | chr4.3:33754216-33754235 | MS.gene50704:CDS | 50.0% | |
GGTCGTTTCTTTGCTGGTGT+TGG | - | chr4.3:33754330-33754349 | MS.gene50704:CDS | 50.0% | |
GTCAAACGCCACACTGACAT+GGG | - | chr4.3:33755360-33755379 | MS.gene50704:intron | 50.0% | |
GTGCAAAGAAGTGAATCCCG+AGG | + | chr4.3:33755099-33755118 | None:intergenic | 50.0% | |
TATGGTTGGCGAGTGATGCT+TGG | - | chr4.3:33754782-33754801 | MS.gene50704:intron | 50.0% | |
TCAAAGCTCCCACTCCGTTA+TGG | - | chr4.3:33754764-33754783 | MS.gene50704:intron | 50.0% | |
TCGTTGCCAAGGGTCGATTA+GGG | - | chr4.3:33754873-33754892 | MS.gene50704:intron | 50.0% | |
TGGCGAGTGATGCTTGGAAT+CGG | - | chr4.3:33754788-33754807 | MS.gene50704:intron | 50.0% | |
TTGCAGGGAGACTTTCTGAC+TGG | - | chr4.3:33754211-33754230 | MS.gene50704:CDS | 50.0% | |
! | CCCAGAATCTTTGAGAAGGC+TGG | - | chr4.3:33755154-33755173 | MS.gene50704:CDS | 50.0% |
! | GACTTTTCTGTCCCTGTCCA+AGG | - | chr4.3:33755552-33755571 | MS.gene50704:intron | 50.0% |
!! | AATGGTGATGGCCTTGGACA+GGG | + | chr4.3:33755566-33755585 | None:intergenic | 50.0% |
AAAGCCAGTGCCACAGCTGA+AGG | - | chr4.3:33755718-33755737 | MS.gene50704:CDS | 55.0% | |
ACCTAGATGGCTCGTTGCCA+AGG | - | chr4.3:33754862-33754881 | MS.gene50704:intron | 55.0% | |
ACGAGCCATCTAGGTGACTC+GGG | + | chr4.3:33754857-33754876 | None:intergenic | 55.0% | |
AGCTCCCACTCCGTTATGGT+TGG | - | chr4.3:33754768-33754787 | MS.gene50704:intron | 55.0% | |
AGGCGTGTCTATTGGTGCAG+TGG | - | chr4.3:33755498-33755517 | MS.gene50704:intron | 55.0% | |
AGTCGTCGTCACAGTCCAAG+GGG | + | chr4.3:33754985-33755004 | None:intergenic | 55.0% | |
CCTAGATGGCTCGTTGCCAA+GGG | - | chr4.3:33754863-33754882 | MS.gene50704:intron | 55.0% | |
CCTTGAGCTCGAAGCCTCAA+CGG | + | chr4.3:33755481-33755500 | None:intergenic | 55.0% | |
CGAGCTCAAGGCGTGTCTAT+TGG | - | chr4.3:33755490-33755509 | MS.gene50704:intron | 55.0% | |
CGTTGCCAAGGGTCGATTAG+GGG | - | chr4.3:33754874-33754893 | MS.gene50704:intron | 55.0% | |
CTCGTTGCCAAGGGTCGATT+AGG | - | chr4.3:33754872-33754891 | MS.gene50704:intron | 55.0% | |
CTGTCCAAGGCCATCACCAT+TGG | - | chr4.3:33755565-33755584 | MS.gene50704:intron | 55.0% | |
CTTCCTCACTTCCTTGCCTG+AGG | - | chr4.3:33754419-33754438 | MS.gene50704:CDS | 55.0% | |
GCCACAGCTGAAGGAGTGAA+CGG | - | chr4.3:33755727-33755746 | MS.gene50704:CDS | 55.0% | |
GTCTCCCCTACTTCATCTCG+TGG | - | chr4.3:33754396-33754415 | MS.gene50704:CDS | 55.0% | |
GTGGTGAATAGGGTCACGAG+CGG | - | chr4.3:33755517-33755536 | MS.gene50704:intron | 55.0% | |
TCACCTCAGGCAAGGAAGTG+AGG | + | chr4.3:33754425-33754444 | None:intergenic | 55.0% | |
TCCAAGGCCATCACCATTGG+CGG | - | chr4.3:33755568-33755587 | MS.gene50704:intron | 55.0% | |
TCCGTTCACTCCTTCAGCTG+TGG | + | chr4.3:33755731-33755750 | None:intergenic | 55.0% | |
TGGTGAATAGGGTCACGAGC+GGG | - | chr4.3:33755518-33755537 | MS.gene50704:intron | 55.0% | |
! | ACTCGCCAACCATAACGGAG+TGG | + | chr4.3:33754776-33754795 | None:intergenic | 55.0% |
! | CGGGCATTGCAATTGTCGCA+TGG | - | chr4.3:33755608-33755627 | MS.gene50704:intron | 55.0% |
! | CTCGCCAACCATAACGGAGT+GGG | + | chr4.3:33754775-33754794 | None:intergenic | 55.0% |
!! | CAATGGTGATGGCCTTGGAC+AGG | + | chr4.3:33755567-33755586 | None:intergenic | 55.0% |
!!! | TCAGCTGTGGCACTGGCTTT+TGG | + | chr4.3:33755718-33755737 | None:intergenic | 55.0% |
CAAGGCCATCACCATTGGCG+GGG | - | chr4.3:33755570-33755589 | MS.gene50704:intron | 60.0% | |
CACTCCTTCAGCTGTGGCAC+TGG | + | chr4.3:33755725-33755744 | None:intergenic | 60.0% | |
CCAAGGCCATCACCATTGGC+GGG | - | chr4.3:33755569-33755588 | MS.gene50704:intron | 60.0% | |
CCATGCCCGAGTCACCTAGA+TGG | - | chr4.3:33754849-33754868 | MS.gene50704:intron | 60.0% | |
CCCTTGGCAACGAGCCATCT+AGG | + | chr4.3:33754866-33754885 | None:intergenic | 60.0% | |
CCGTTGAGGCTTCGAGCTCA+AGG | - | chr4.3:33755478-33755497 | MS.gene50704:intron | 60.0% | |
GAAAGCCCCGCCAATGGTGA+TGG | + | chr4.3:33755578-33755597 | None:intergenic | 60.0% | |
GGCTTCCCCTAATCGACCCT+TGG | + | chr4.3:33754882-33754901 | None:intergenic | 60.0% | |
GGTGAATAGGGTCACGAGCG+GGG | - | chr4.3:33755519-33755538 | MS.gene50704:intron | 60.0% | |
! | CCATCTAGGTGACTCGGGCA+TGG | + | chr4.3:33754852-33754871 | None:intergenic | 60.0% |
ACAACACGCGCCTCCCAACG+CGG | + | chr4.3:33755270-33755289 | None:intergenic | 65.0% | |
!! | CCCGCCAATGGTGATGGCCT+TGG | + | chr4.3:33755572-33755591 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 33753604 | 33755798 | 33753604 | ID=MS.gene50704 |
chr4.3 | mRNA | 33753604 | 33755798 | 33753604 | ID=MS.gene50704.t1;Parent=MS.gene50704 |
chr4.3 | exon | 33755669 | 33755798 | 33755669 | ID=MS.gene50704.t1.exon1;Parent=MS.gene50704.t1 |
chr4.3 | CDS | 33755669 | 33755798 | 33755669 | ID=cds.MS.gene50704.t1;Parent=MS.gene50704.t1 |
chr4.3 | exon | 33754962 | 33755308 | 33754962 | ID=MS.gene50704.t1.exon2;Parent=MS.gene50704.t1 |
chr4.3 | CDS | 33754962 | 33755308 | 33754962 | ID=cds.MS.gene50704.t1;Parent=MS.gene50704.t1 |
chr4.3 | exon | 33753604 | 33754689 | 33753604 | ID=MS.gene50704.t1.exon3;Parent=MS.gene50704.t1 |
chr4.3 | CDS | 33753604 | 33754689 | 33753604 | ID=cds.MS.gene50704.t1;Parent=MS.gene50704.t1 |
Gene Sequence |
Protein sequence |