AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022490.t1 MTR_3g074390 77.734 512 109 1 1 507 1 512 0.0 830
MS.gene022490.t1 MTR_3g074410 76.424 509 118 1 1 507 1 509 0.0 811
MS.gene022490.t1 MTR_3g074270 68.337 499 137 2 1 499 1 478 0.0 705
MS.gene022490.t1 MTR_3g074340 96.584 322 11 0 186 507 19 340 0.0 634
MS.gene022490.t1 MTR_3g074370 96.273 322 12 0 186 507 19 340 0.0 630
MS.gene022490.t1 MTR_3g074320 95.652 322 14 0 186 507 19 340 0.0 629
MS.gene022490.t1 MTR_3g074380 77.322 366 80 2 1 363 1 366 0.0 583
MS.gene022490.t1 MTR_3g008160 51.606 498 231 7 11 502 9 502 0.0 532
MS.gene022490.t1 MTR_3g008170 51.961 510 229 7 5 501 4 510 0.0 518
MS.gene022490.t1 MTR_5g006070 49.697 495 239 7 15 503 14 504 1.74e-177 509
MS.gene022490.t1 MTR_5g041550 51.569 510 240 5 1 505 1 508 1.36e-175 504
MS.gene022490.t1 MTR_0204s0020 48.660 485 244 4 12 495 10 490 4.11e-175 502
MS.gene022490.t1 MTR_3g074400 59.161 453 131 6 50 481 1 420 2.81e-173 494
MS.gene022490.t1 MTR_3g093010 51.677 507 238 5 4 505 3 507 3.17e-172 495
MS.gene022490.t1 MTR_0009s0370 49.301 501 246 6 8 503 7 504 1.10e-171 494
MS.gene022490.t1 MTR_0204s0020 48.041 485 244 5 12 495 10 487 4.90e-171 491
MS.gene022490.t1 MTR_1g038630 47.515 503 260 3 1 501 1 501 9.90e-169 486
MS.gene022490.t1 MTR_5g082540 47.984 496 252 4 10 501 8 501 5.28e-168 484
MS.gene022490.t1 MTR_3g008160 50.547 457 218 6 50 502 1 453 1.36e-167 482
MS.gene022490.t1 MTR_5g094760 48.898 499 246 5 1 494 1 495 2.16e-167 483
MS.gene022490.t1 MTR_7g091690 48.497 499 248 5 1 494 1 495 7.72e-167 481
MS.gene022490.t1 MTR_4g116790 45.817 502 267 4 3 503 7 504 2.05e-166 481
MS.gene022490.t1 MTR_0204s0040 46.045 493 261 4 3 494 9 497 2.33e-165 478
MS.gene022490.t1 MTR_4g091370 52.664 488 225 5 15 498 15 500 1.49e-163 473
MS.gene022490.t1 MTR_1g104750 46.123 503 262 7 1 498 1 499 3.24e-163 472
MS.gene022490.t1 MTR_4g116770 46.045 493 261 4 3 494 205 693 7.82e-163 478
MS.gene022490.t1 MTR_3g023480 47.887 497 252 5 15 506 13 507 3.47e-162 470
MS.gene022490.t1 MTR_1g104770 45.328 503 267 6 1 498 1 500 2.52e-161 467
MS.gene022490.t1 MTR_1g104780 47.431 506 255 8 1 500 1 501 4.28e-160 465
MS.gene022490.t1 MTR_5g006070 48.696 460 226 7 50 503 1 456 4.84e-160 463
MS.gene022490.t1 MTR_3g007910 49.197 498 218 7 4 498 3 468 2.21e-159 461
MS.gene022490.t1 MTR_4g090600 51.378 508 237 6 7 506 3 508 1.44e-155 453
MS.gene022490.t1 MTR_6g087040 46.245 506 262 8 1 500 1 502 1.01e-154 451
MS.gene022490.t1 MTR_6g088375 46.245 506 262 8 1 500 1 502 1.01e-154 451
MS.gene022490.t1 MTR_3g093060 50.993 453 214 5 50 496 1 451 1.63e-154 448
MS.gene022490.t1 MTR_1g038600 45.309 501 256 4 1 501 1 483 2.30e-154 449
MS.gene022490.t1 MTR_8g102860 45.344 494 263 6 15 505 18 507 2.48e-153 447
MS.gene022490.t1 MTR_8g102860 45.316 459 244 6 50 505 1 455 1.33e-140 413
MS.gene022490.t1 MTR_4g116790 44.875 361 196 3 3 362 7 365 1.63e-111 336
MS.gene022490.t1 MTR_3g074330 91.772 158 6 1 1 151 1 158 8.69e-93 280
MS.gene022490.t1 MTR_3g074360 91.772 158 6 1 1 151 1 158 8.69e-93 280
MS.gene022490.t1 MTR_3g074310 91.139 158 7 1 1 151 1 158 1.96e-91 276
MS.gene022490.t1 MTR_4g072030 30.658 486 291 9 27 491 31 491 3.75e-59 204
MS.gene022490.t1 MTR_4g069500 30.539 501 300 10 27 505 34 508 3.79e-59 204
MS.gene022490.t1 MTR_4g069500 32.339 436 266 8 92 505 30 458 2.00e-58 201
MS.gene022490.t1 MTR_8g077890 31.365 491 280 13 28 490 24 485 7.03e-58 200
MS.gene022490.t1 MTR_6g088450 31.545 466 275 12 28 477 63 500 1.23e-56 197
MS.gene022490.t1 MTR_3g116240 31.070 486 288 12 27 489 32 493 3.48e-56 196
MS.gene022490.t1 MTR_8g103500 28.049 492 307 10 12 483 3 467 5.02e-54 189
MS.gene022490.t1 MTR_2g013310 28.903 474 301 8 24 487 53 500 3.88e-52 185
MS.gene022490.t1 MTR_2g013310 29.829 409 271 5 88 487 26 427 4.66e-51 180
MS.gene022490.t1 MTR_5g075300 29.713 488 292 11 28 490 24 485 9.44e-50 178
MS.gene022490.t1 MTR_7g446340 26.908 498 322 11 20 503 51 520 1.16e-48 176
MS.gene022490.t1 MTR_6g007340 26.908 498 322 11 20 503 51 520 1.16e-48 176
MS.gene022490.t1 MTR_5g096000 52.247 178 67 1 4 181 3 162 6.60e-48 168
MS.gene022490.t1 MTR_5g096000 52.273 132 62 1 368 498 168 299 4.62e-34 130
MS.gene022490.t1 MTR_8g077300 28.256 407 275 4 82 483 79 473 3.22e-45 165
MS.gene022490.t1 MTR_4g077740 28.721 477 301 12 22 483 44 496 2.10e-44 164
MS.gene022490.t1 MTR_8g077310 27.861 402 283 2 82 483 87 481 4.80e-44 162
MS.gene022490.t1 MTR_8g077310 27.621 391 276 2 93 483 1 384 1.67e-43 159
MS.gene022490.t1 MTR_7g094450 28.501 407 275 5 79 483 77 469 2.21e-43 160
MS.gene022490.t1 MTR_3g084110 25.833 480 320 10 34 506 39 489 1.38e-41 155
MS.gene022490.t1 MTR_1g116660 26.634 413 286 8 102 506 98 501 8.63e-40 151
MS.gene022490.t1 MTR_5g020270 26.799 403 286 4 82 483 90 484 1.18e-39 150
MS.gene022490.t1 MTR_7g082270 26.305 479 318 10 9 483 51 498 1.26e-39 150
MS.gene022490.t1 MTR_7g005910 27.505 469 308 10 29 490 39 482 1.97e-39 150
MS.gene022490.t1 MTR_6g018790 26.850 473 309 9 16 483 98 538 2.83e-39 150
MS.gene022490.t1 MTR_7g094110 27.970 404 275 6 82 483 82 471 2.97e-39 149
MS.gene022490.t1 MTR_5g020270 26.531 392 279 4 93 483 1 384 4.78e-39 146
MS.gene022490.t1 MTR_7g113970 25.980 408 282 6 82 485 102 493 1.23e-38 147
MS.gene022490.t1 MTR_7g113960 27.160 405 275 7 82 483 67 454 1.31e-38 147
MS.gene022490.t1 MTR_5g019870 26.879 439 293 9 75 490 49 482 4.90e-38 145
MS.gene022490.t1 MTR_1g116650 26.980 404 272 7 107 505 146 531 4.78e-37 144
MS.gene022490.t1 MTR_2g020710 27.586 406 273 7 83 483 1 390 9.11e-37 140
MS.gene022490.t1 MTR_2g020710 27.518 407 274 7 82 483 89 479 1.63e-36 141
MS.gene022490.t1 MTR_4g069500 30.864 324 197 7 202 505 3 319 4.12e-35 134
MS.gene022490.t1 MTR_7g082270 26.230 427 281 9 9 432 51 446 5.28e-35 137
MS.gene022490.t1 MTR_1g022315 25.610 410 283 5 82 483 89 484 8.03e-35 137
MS.gene022490.t1 MTR_4g118610 26.034 411 275 8 82 483 92 482 2.36e-34 135
MS.gene022490.t1 MTR_0064s0040 47.651 149 65 2 4 151 5 141 2.74e-34 127
MS.gene022490.t1 MTR_1g022315 25.000 396 281 4 93 483 1 385 3.83e-34 133
MS.gene022490.t1 MTR_3g080240 27.273 462 298 13 28 483 98 527 3.92e-34 135
MS.gene022490.t1 MTR_5g077580 24.581 537 291 11 34 483 37 546 2.44e-33 133
MS.gene022490.t1 MTR_5g020270 25.743 404 268 7 82 483 90 463 3.06e-33 132
MS.gene022490.t1 MTR_4g013205 26.180 466 300 12 28 485 41 470 4.79e-33 131
MS.gene022490.t1 MTR_2g048720 29.882 338 213 8 34 365 37 356 7.01e-33 132
MS.gene022490.t1 MTR_2g049020 30.499 341 209 8 34 364 37 359 1.15e-32 131
MS.gene022490.t1 MTR_7g094110 26.799 403 261 7 82 483 82 451 4.12e-32 128
MS.gene022490.t1 MTR_8g077310 27.817 284 198 2 82 365 87 363 4.41e-30 122
MS.gene022490.t1 MTR_2g026160 30.072 276 183 3 106 372 94 368 5.90e-29 120
MS.gene022490.t1 MTR_6g087910 25.369 406 268 9 92 485 102 484 9.91e-29 119
MS.gene022490.t1 MTR_7g113960 27.407 270 188 3 82 351 67 328 1.35e-26 111
MS.gene022490.t1 MTR_7g113970 26.277 274 194 3 82 355 102 367 2.50e-26 111
MS.gene022490.t1 MTR_4g064820 26.741 359 234 8 22 363 95 441 8.42e-26 110
MS.gene022490.t1 MTR_2g020710 26.627 338 227 7 82 414 89 410 1.55e-25 109
MS.gene022490.t1 MTR_2g020710 27.715 267 184 4 82 347 89 347 2.34e-25 108
MS.gene022490.t1 MTR_2g020710 27.715 267 184 4 82 347 89 347 4.10e-25 107
MS.gene022490.t1 MTR_1g038620 34.375 160 86 3 201 360 50 190 4.69e-24 99.8
MS.gene022490.t1 MTR_4g118610 24.854 342 228 8 82 414 92 413 1.15e-23 103
MS.gene022490.t1 MTR_1g114280 34.868 152 80 2 346 497 21 153 3.29e-21 90.9
MS.gene022490.t1 MTR_2g026140 25.937 347 217 8 29 365 30 346 5.49e-21 96.7
MS.gene022490.t1 MTR_3g116060 31.214 173 112 4 90 258 52 221 2.95e-17 85.5
MS.gene022490.t1 MTR_3g116060 27.586 232 147 6 263 481 488 711 4.07e-13 72.4
MS.gene022490.t1 MTR_3g118530 30.409 171 116 3 90 258 54 223 9.03e-16 80.9
MS.gene022490.t1 MTR_3g118530 27.727 220 139 5 274 481 510 721 3.77e-12 69.3
MS.gene022490.t1 MTR_5g044910 29.480 173 119 3 83 253 47 218 1.51e-15 80.1
MS.gene022490.t1 MTR_3g118530 30.409 171 116 3 90 258 54 223 1.97e-15 79.7
MS.gene022490.t1 MTR_5g024740 27.119 236 150 7 21 253 2 218 3.56e-15 79.0
MS.gene022490.t1 MTR_8g073100 27.933 179 126 3 77 253 41 218 5.60e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022490.t1 AT1G34580 62.948 502 182 3 1 498 1 502 0.0 643
MS.gene022490.t1 AT1G34580 62.168 452 168 2 50 498 1 452 0.0 578
MS.gene022490.t1 AT1G11260 52.745 510 235 5 1 506 1 508 0.0 528
MS.gene022490.t1 AT3G19930 52.000 500 235 4 4 500 3 500 2.03e-179 514
MS.gene022490.t1 AT3G19930 52.000 500 235 4 4 500 3 500 2.03e-179 514
MS.gene022490.t1 AT4G21480 52.390 502 235 4 1 500 1 500 2.66e-177 508
MS.gene022490.t1 AT5G26340 48.723 509 253 6 1 504 1 506 3.44e-176 506
MS.gene022490.t1 AT5G23270 51.690 503 232 7 1 496 1 499 2.31e-175 503
MS.gene022490.t1 AT3G19940 50.405 494 236 5 19 505 21 512 3.09e-175 503
MS.gene022490.t1 AT4G02050 47.945 511 254 6 1 506 1 504 9.86e-174 499
MS.gene022490.t1 AT4G02050 47.945 511 254 6 1 506 1 504 9.86e-174 499
MS.gene022490.t1 AT1G50310 50.515 485 235 5 19 500 21 503 9.24e-171 492
MS.gene022490.t1 AT5G61520 47.325 486 245 5 17 495 18 499 2.05e-161 468
MS.gene022490.t1 AT5G26250 45.582 498 265 5 9 504 8 501 3.99e-155 452
MS.gene022490.t1 AT3G05960 44.400 500 272 5 9 506 7 502 1.66e-150 440
MS.gene022490.t1 AT1G77210 43.418 509 277 9 1 503 1 504 2.63e-147 432
MS.gene022490.t1 AT1G77210 43.418 509 277 9 1 503 1 504 2.63e-147 432
MS.gene022490.t1 AT5G61520 46.476 454 232 5 49 495 2 451 8.19e-147 429
MS.gene022490.t1 AT1G07340 43.426 502 275 6 1 498 1 497 3.30e-140 413
MS.gene022490.t1 AT1G50310 49.148 352 175 4 151 500 11 360 3.30e-118 352
MS.gene022490.t1 AT1G77210 40.845 355 203 7 151 503 6 355 1.90e-97 299
MS.gene022490.t1 AT3G18830 30.754 491 293 10 27 495 40 505 2.47e-58 202
MS.gene022490.t1 AT2G16120 30.339 501 302 13 27 505 30 505 9.98e-58 200
MS.gene022490.t1 AT2G16130 30.595 487 291 12 27 490 30 492 1.79e-56 196
MS.gene022490.t1 AT2G18480 31.915 470 269 11 38 483 37 479 2.98e-55 193
MS.gene022490.t1 AT4G36670 29.652 489 292 12 27 490 21 482 1.38e-52 186
MS.gene022490.t1 AT2G20780 27.463 477 310 10 20 487 51 500 3.14e-48 174
MS.gene022490.t1 AT2G20780 28.117 409 278 6 87 487 42 442 1.46e-46 169
MS.gene022490.t1 AT1G75220 27.861 402 283 2 82 483 88 482 1.45e-45 166
MS.gene022490.t1 AT2G48020 28.431 408 274 6 82 486 68 460 3.62e-45 165
MS.gene022490.t1 AT2G48020 28.431 408 274 6 82 486 68 460 3.62e-45 165
MS.gene022490.t1 AT5G17010 29.436 479 297 12 21 483 45 498 1.12e-43 162
MS.gene022490.t1 AT5G17010 29.436 479 297 12 21 483 45 498 1.12e-43 162
MS.gene022490.t1 AT5G17010 29.436 479 297 12 21 483 45 498 1.12e-43 162
MS.gene022490.t1 AT1G54730 28.224 411 265 8 82 483 72 461 1.14e-43 161
MS.gene022490.t1 AT5G16150 29.310 406 265 6 86 485 151 540 4.65e-42 158
MS.gene022490.t1 AT5G16150 29.310 406 265 6 86 485 151 540 4.65e-42 158
MS.gene022490.t1 AT5G16150 29.310 406 265 6 86 485 151 540 4.65e-42 158
MS.gene022490.t1 AT1G19450 26.866 402 287 2 82 483 89 483 1.05e-41 156
MS.gene022490.t1 AT1G08900 27.612 402 279 4 82 483 23 412 4.88e-41 152
MS.gene022490.t1 AT5G59250 29.485 485 290 13 22 483 97 552 9.70e-41 154
MS.gene022490.t1 AT1G08930 25.880 483 314 10 8 483 42 487 1.03e-40 153
MS.gene022490.t1 AT1G08930 25.880 483 314 10 8 483 42 487 1.03e-40 153
MS.gene022490.t1 AT1G08900 27.612 402 279 4 82 483 57 446 1.18e-40 152
MS.gene022490.t1 AT1G08900 27.612 402 279 4 82 483 65 454 1.29e-40 152
MS.gene022490.t1 AT1G08900 27.612 402 279 4 82 483 65 454 1.29e-40 152
MS.gene022490.t1 AT5G27350 26.980 404 279 5 84 485 73 462 5.24e-40 151
MS.gene022490.t1 AT3G05160 26.068 468 315 5 16 483 14 450 4.19e-39 148
MS.gene022490.t1 AT1G54730 27.317 410 249 9 82 483 72 440 6.63e-39 147
MS.gene022490.t1 AT1G54730 28.378 370 235 8 82 442 72 420 8.72e-39 147
MS.gene022490.t1 AT3G03090 30.435 414 260 9 85 483 98 498 1.17e-38 147
MS.gene022490.t1 AT3G05400 26.667 405 283 5 82 485 66 457 2.46e-38 146
MS.gene022490.t1 AT3G05165 26.068 468 315 5 16 483 23 459 2.48e-38 146
MS.gene022490.t1 AT3G05165 26.068 468 315 5 16 483 23 459 2.48e-38 146
MS.gene022490.t1 AT3G05165 26.068 468 315 5 16 483 23 459 2.48e-38 146
MS.gene022490.t1 AT3G05160 27.000 400 280 3 84 483 14 401 2.94e-38 145
MS.gene022490.t1 AT3G05160 27.000 400 280 3 84 483 14 401 2.94e-38 145
MS.gene022490.t1 AT4G04760 27.833 406 276 5 82 483 12 404 4.23e-38 144
MS.gene022490.t1 AT4G04760 27.833 406 276 5 82 483 71 463 1.28e-37 144
MS.gene022490.t1 AT3G05400 28.763 372 250 6 116 485 79 437 7.14e-37 142
MS.gene022490.t1 AT1G08890 28.465 404 273 8 82 483 67 456 7.85e-37 142
MS.gene022490.t1 AT1G08900 28.406 345 235 4 82 426 65 397 9.02e-37 141
MS.gene022490.t1 AT2G43330 29.008 393 265 9 107 492 99 484 1.55e-36 142
MS.gene022490.t1 AT4G04750 26.895 409 275 6 82 483 76 467 1.75e-36 141
MS.gene022490.t1 AT4G04750 26.895 409 275 6 82 483 76 467 1.75e-36 141
MS.gene022490.t1 AT4G04760 27.654 405 275 5 82 483 71 460 2.18e-36 141
MS.gene022490.t1 AT4G04750 26.895 409 275 6 82 483 120 511 2.54e-36 141
MS.gene022490.t1 AT3G05150 29.176 425 275 8 82 497 75 482 3.76e-36 140
MS.gene022490.t1 AT3G05150 28.747 407 269 6 82 483 75 465 3.96e-36 140
MS.gene022490.t1 AT3G05150 28.747 407 269 6 82 483 75 465 3.96e-36 140
MS.gene022490.t1 AT3G05155 25.495 404 283 7 82 483 67 454 9.32e-36 139
MS.gene022490.t1 AT5G27360 25.250 400 287 4 84 483 77 464 1.21e-35 139
MS.gene022490.t1 AT5G18840 25.558 403 287 4 82 483 84 474 1.24e-35 139
MS.gene022490.t1 AT5G27360 25.250 400 287 4 84 483 125 512 3.48e-35 138
MS.gene022490.t1 AT1G30220 31.609 348 206 8 34 374 39 361 2.24e-34 136
MS.gene022490.t1 AT3G05165 26.034 411 273 5 16 426 23 402 2.86e-34 135
MS.gene022490.t1 AT1G54730 27.371 369 219 9 82 442 72 399 3.95e-34 133
MS.gene022490.t1 AT1G54730 28.070 342 216 8 82 414 72 392 8.02e-34 132
MS.gene022490.t1 AT1G54730 28.070 342 216 8 82 414 72 392 8.02e-34 132
MS.gene022490.t1 AT3G05165 26.034 411 273 5 16 426 23 402 1.03e-33 133
MS.gene022490.t1 AT3G05165 26.034 411 273 5 16 426 23 402 1.03e-33 133
MS.gene022490.t1 AT5G27360 25.352 355 253 4 129 483 18 360 3.79e-33 130
MS.gene022490.t1 AT5G27360 25.352 355 253 4 129 483 18 360 3.79e-33 130
MS.gene022490.t1 AT1G79820 26.877 413 271 11 83 485 97 488 2.97e-32 129
MS.gene022490.t1 AT1G79820 26.877 413 271 11 83 485 97 488 2.97e-32 129
MS.gene022490.t1 AT1G67300 28.256 407 257 11 92 485 103 487 3.29e-32 129
MS.gene022490.t1 AT1G67300 28.256 407 257 11 92 485 103 487 3.29e-32 129
MS.gene022490.t1 AT4G16480 30.460 348 214 7 34 371 38 367 2.51e-31 127
MS.gene022490.t1 AT4G16480 30.460 348 214 7 34 371 38 367 2.51e-31 127
MS.gene022490.t1 AT4G16480 30.460 348 214 7 34 371 38 367 2.51e-31 127
MS.gene022490.t1 AT1G67300 27.966 354 225 9 92 435 103 436 3.87e-31 125
MS.gene022490.t1 AT1G67300 27.966 354 225 9 92 435 103 436 3.87e-31 125
MS.gene022490.t1 AT1G05030 25.160 469 313 12 21 483 77 513 4.62e-31 126
MS.gene022490.t1 AT2G48020 27.562 283 196 3 82 363 68 342 6.22e-31 124
MS.gene022490.t1 AT1G54730 29.137 278 173 6 82 351 72 333 6.63e-31 122
MS.gene022490.t1 AT1G67300 28.010 407 259 11 92 485 103 488 1.08e-30 125
MS.gene022490.t1 AT1G05030 26.238 404 276 9 87 483 73 461 1.33e-30 124
MS.gene022490.t1 AT1G67300 28.909 339 211 9 92 420 103 421 2.02e-30 123
MS.gene022490.t1 AT1G67300 28.909 339 211 9 92 420 103 421 2.02e-30 123
MS.gene022490.t1 AT2G48020 26.812 276 194 2 82 357 68 335 1.14e-29 119
MS.gene022490.t1 AT1G54730 29.644 253 157 5 82 326 72 311 1.18e-29 119
MS.gene022490.t1 AT1G54730 29.644 253 157 5 82 326 72 311 1.18e-29 119
MS.gene022490.t1 AT1G54730 29.644 253 157 5 82 326 72 311 2.70e-29 119
MS.gene022490.t1 AT3G20460 24.814 403 289 6 82 483 93 482 1.85e-28 118
MS.gene022490.t1 AT2G35740 26.724 348 229 5 34 372 37 367 5.37e-28 118
MS.gene022490.t1 AT1G08920 23.775 408 287 6 82 483 72 461 8.16e-28 116
MS.gene022490.t1 AT1G08920 22.906 406 300 5 82 483 72 468 1.11e-27 116
MS.gene022490.t1 AT1G79820 26.966 356 238 10 83 433 97 435 5.07e-27 114
MS.gene022490.t1 AT5G27360 23.442 337 246 4 84 420 77 401 4.77e-25 107
MS.gene022490.t1 AT3G05155 24.354 271 192 4 82 351 67 325 4.62e-24 103
MS.gene022490.t1 AT5G17010 25.826 484 248 14 21 483 42 435 4.75e-24 105
MS.gene022490.t1 AT1G08920 23.647 351 244 6 82 426 72 404 4.87e-24 105
MS.gene022490.t1 AT1G79820 25.799 407 235 11 83 485 97 440 5.57e-22 99.0
MS.gene022490.t1 AT3G51490 32.447 188 123 4 87 272 2 187 2.74e-21 98.2
MS.gene022490.t1 AT3G51490 27.155 232 150 6 262 481 440 664 3.22e-12 69.7
MS.gene022490.t1 AT3G51490 32.447 188 123 4 87 272 52 237 3.41e-21 97.8
MS.gene022490.t1 AT3G51490 32.447 188 123 4 87 272 52 237 3.87e-21 97.8
MS.gene022490.t1 AT3G51490 27.155 232 150 6 262 481 490 714 3.42e-12 69.3
MS.gene022490.t1 AT1G20840 28.272 191 134 3 90 278 52 241 1.02e-17 87.0
MS.gene022490.t1 AT1G20840 28.272 191 134 3 90 278 52 241 1.02e-17 87.0
MS.gene022490.t1 AT1G79820 25.753 365 204 11 125 485 77 378 5.22e-17 83.2
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.02e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.03e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 508 710 8.65e-11 65.1
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.03e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 508 710 8.65e-11 65.1
MS.gene022490.t1 AT4G35300 32.184 174 114 4 87 258 52 223 1.03e-16 84.0
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 508 710 8.65e-11 65.1
MS.gene022490.t1 AT4G35300 27.830 212 131 6 283 481 321 523 7.39e-11 65.1

Find 118 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTGTTCTATGCATTT+TGG 0.096323 3.2:+66928087 MS.gene022490:CDS
GGTCGTATTCTTCTTGGTTT+TGG 0.158443 3.2:+66926572 MS.gene022490:CDS
TGGAGTCAATGTACATTATA+TGG 0.160882 3.2:+66928168 MS.gene022490:CDS
CTTGCTGGTGCTGCTATTAA+TGG 0.180124 3.2:+66926518 MS.gene022490:CDS
GGATATGACATTGGGATTTC+AGG 0.189475 3.2:+66925768 MS.gene022490:CDS
TTACTTTCTGCCGTTATTCT+TGG 0.197875 3.2:+66927461 MS.gene022490:CDS
ATTCTTGGTCGTATTCTTCT+TGG 0.241656 3.2:+66926566 MS.gene022490:CDS
CGCAGGTTTCGGTTGGTCTT+GGG 0.245158 3.2:+66927917 MS.gene022490:CDS
CCGCAGGTTTCGGTTGGTCT+TGG 0.258380 3.2:+66927916 MS.gene022490:CDS
TATTGGCGGCAGTTTGTTAA+AGG 0.276262 3.2:+66928203 MS.gene022490:CDS
CTCTTTCAATCTGTGGGTTT+AGG 0.277247 3.2:+66927425 MS.gene022490:CDS
GGTGGTGTCATCTTTCTTGC+TGG 0.282200 3.2:+66926503 MS.gene022490:CDS
CTCTCAAAGATGGTCATAAA+TGG 0.284366 3.2:-66927311 None:intergenic
TGTTTCTATGCCGCAGGTTT+CGG 0.288265 3.2:+66927906 MS.gene022490:CDS
TTTGCAATGCTTTCCTGGCT+TGG 0.290814 3.2:-66927202 None:intergenic
CATTCTATTGCTTGTCTGTC+TGG 0.306011 3.2:+66927565 MS.gene022490:CDS
AATATTGCTATGCTCATTCT+TGG 0.318012 3.2:+66926551 MS.gene022490:CDS
GCACCTTCCAATGGCTTTGA+TGG 0.330273 3.2:+66925684 MS.gene022490:CDS
ATGCTATGCCACTTCAAGTT+TGG 0.341229 3.2:+66928062 MS.gene022490:CDS
CGAAGATTCTTGTTCATTAC+GGG 0.343244 3.2:+66927539 MS.gene022490:CDS
GCATCTAGTGGACTCATTCT+TGG 0.350307 3.2:+66925747 MS.gene022490:CDS
CGCCAACTCCTATGAAGAAT+TGG 0.355831 3.2:-66927022 None:intergenic
GGTCTTGGGGCCCACTCACC+TGG 0.356458 3.2:+66927931 MS.gene022490:CDS
TCGAAGATTCTTGTTCATTA+CGG 0.369531 3.2:+66927538 MS.gene022490:CDS
GGAGTCAATGTACATTATAT+GGG 0.376356 3.2:+66928169 MS.gene022490:CDS
ACAGGCTTCCAATTCTTCAT+AGG 0.386056 3.2:+66927014 MS.gene022490:CDS
GGTGTCTGCTTTGCTAGCTT+TGG 0.387628 3.2:+66927818 MS.gene022490:CDS
GCTGCCTTTCTTAGAATATC+CGG 0.392951 3.2:-66926335 None:intergenic
ATTTCTCAATAAATTCTTCC+CGG 0.399065 3.2:+66926316 MS.gene022490:CDS
GCTTTGGCGACTGGTGTTGA+TGG 0.405109 3.2:+66927834 MS.gene022490:CDS
GGGAAGAATTTATTGAGAAA+TGG 0.413138 3.2:-66926314 None:intergenic
TGGGGCTGGCGACTCTCTCT+TGG 0.414296 3.2:+66927089 MS.gene022490:CDS
TGACTCCAAAGCAATTCCTT+TGG 0.421772 3.2:-66928153 None:intergenic
GCCACGTTCAACCAAGCTGC+TGG 0.422123 3.2:-66927171 None:intergenic
TATGGGGCAAACATTGGTAT+TGG 0.425302 3.2:+66928186 MS.gene022490:CDS
AAAGCAATTCCTTTGGTCTC+AGG 0.428168 3.2:-66928146 None:intergenic
GCTTTGCTAGCTTTGGCGAC+TGG 0.429820 3.2:+66927825 MS.gene022490:CDS
CCCACAGATTGAAAGAGGTT+TGG 0.431157 3.2:-66927419 None:intergenic
GGGCAATGCAACATTAGTAT+TGG 0.438296 3.2:+66927875 MS.gene022490:CDS
CTCATTCTTGGATATGACAT+TGG 0.445169 3.2:+66925759 MS.gene022490:CDS
TCATTCTTGGATATGACATT+GGG 0.445844 3.2:+66925760 MS.gene022490:CDS
TGAGACCAAAGGAATTGCTT+TGG 0.446229 3.2:+66928148 MS.gene022490:CDS
CCTGCAGCCGTGATGACAAT+TGG 0.446393 3.2:+66927125 MS.gene022490:CDS
CTTAATGAGTTCTTCTAACT+CGG 0.449686 3.2:-66927255 None:intergenic
CTAAACCCACAGATTGAAAG+AGG 0.452624 3.2:-66927424 None:intergenic
GCCATTGGAAGGTGCATCAA+TGG 0.461494 3.2:-66925676 None:intergenic
GCCATTGATGCACCTTCCAA+TGG 0.471156 3.2:+66925675 MS.gene022490:CDS
CTTCCCGGATATTCTAAGAA+AGG 0.471446 3.2:+66926331 MS.gene022490:CDS
TTCCAATTCTTCATAGGAGT+TGG 0.473326 3.2:+66927020 MS.gene022490:CDS
CCAAACCTCTTTCAATCTGT+GGG 0.474306 3.2:+66927419 MS.gene022490:CDS
CCAATTGTCATCACGGCTGC+AGG 0.478121 3.2:-66927125 None:intergenic
ACCAAACCTCTTTCAATCTG+TGG 0.482629 3.2:+66927418 MS.gene022490:CDS
CGAAGAAATACCATCGTGTT+GGG 0.482762 3.2:+66926482 MS.gene022490:CDS
AAAGCACCTCGCCACTTTGG+TGG 0.485890 3.2:-66926987 None:intergenic
TCGCCAGCCCCATGTGTGCT+TGG 0.486469 3.2:-66927078 None:intergenic
TGGCGAGGTGCTTTCAGCAC+AGG 0.490579 3.2:+66926996 MS.gene022490:CDS
TTACTATGTTTCTATGCCGC+AGG 0.496329 3.2:+66927900 MS.gene022490:CDS
TATCTTTCCATCAAAGCCAT+TGG 0.503256 3.2:-66925691 None:intergenic
AATTTCACTTGGAATTAGCC+AGG 0.504907 3.2:-66927949 None:intergenic
CTGCCAAGCACACATGGGGC+TGG 0.506056 3.2:+66927075 MS.gene022490:CDS
GCGATTTCAGAAAGGTATAG+TGG 0.506465 3.2:-66926963 None:intergenic
GCAGGTTTCGGTTGGTCTTG+GGG 0.509443 3.2:+66927918 MS.gene022490:CDS
CGACAAAAGCAGTTGAGACT+AGG 0.517339 3.2:-66927505 None:intergenic
ACGTGACTGCCAAGCACACA+TGG 0.517471 3.2:+66927069 MS.gene022490:CDS
TCTATGCCGCAGGTTTCGGT+TGG 0.521516 3.2:+66927910 MS.gene022490:CDS
CTGAAAGCACCTCGCCACTT+TGG 0.525320 3.2:-66926990 None:intergenic
CTGCCTTTCTTAGAATATCC+GGG 0.528095 3.2:-66926334 None:intergenic
AGTTAGAAGAACTCATTAAG+TGG 0.530071 3.2:+66927258 MS.gene022490:CDS
TGCTGGGTGTGTCGGATATG+AGG 0.531185 3.2:-66927154 None:intergenic
AGGTTGAAAATGGCAGGTGG+AGG 0.531701 3.2:+66925648 None:intergenic
GGGGCAAACATTGGTATTGG+CGG 0.533095 3.2:+66928189 MS.gene022490:CDS
AACCAAGCTGCTGGGTGTGT+CGG 0.542991 3.2:-66927162 None:intergenic
AGCAAAGTCACTGCAGCTAT+CGG 0.550701 3.2:+66926458 MS.gene022490:CDS
TGTATCGTTGCTGCATCTAG+TGG 0.552864 3.2:+66925735 MS.gene022490:CDS
ACATTATATGGGGCAAACAT+TGG 0.553331 3.2:+66928180 MS.gene022490:CDS
AGGACAAGGTTGAAAATGGC+AGG 0.553852 3.2:+66925642 None:intergenic
TCGATATTGTCTCTCAAAGA+TGG 0.553960 3.2:-66927321 None:intergenic
TCGAAGAAATACCATCGTGT+TGG 0.559517 3.2:+66926481 MS.gene022490:CDS
ATATCGACCTCACTTAATCA+TGG 0.560389 3.2:+66927337 MS.gene022490:CDS
ATCCGACACACCCAGCAGCT+TGG 0.562187 3.2:+66927160 MS.gene022490:CDS
AGAAAGCACCAAACTTGAAG+TGG 0.564619 3.2:-66928070 None:intergenic
CCACGTTCAACCAAGCTGCT+GGG 0.564694 3.2:-66927170 None:intergenic
GGTACAAAGGACATGTCAAA+GGG 0.571326 3.2:+66927855 MS.gene022490:CDS
GTGGCATGATAGACCAAGCC+AGG 0.572272 3.2:+66927189 MS.gene022490:CDS
TTAATGAGTTCTTCTAACTC+GGG 0.576345 3.2:-66927254 None:intergenic
TTGGTGGAGCGATTTCAGAA+AGG 0.578849 3.2:-66926971 None:intergenic
TTTAAGGGGAAAATTTCACT+TGG 0.579987 3.2:-66927960 None:intergenic
GGTTGAAAATGGCAGGTGGA+GGG 0.582573 3.2:+66925649 None:intergenic
TAACTCGGGCTCAACATCGA+TGG 0.583460 3.2:-66927240 None:intergenic
TGGTACAAAGGACATGTCAA+AGG 0.584833 3.2:+66927854 MS.gene022490:CDS
CTGAAATCGCTCCACCAAAG+TGG 0.593327 3.2:+66926976 MS.gene022490:CDS
TTTCCATCAAAGCCATTGGA+AGG 0.597415 3.2:-66925687 None:intergenic
TTGGAATTAGCCAGGTGAGT+GGG 0.599809 3.2:-66927941 None:intergenic
GAGTCAATGTACATTATATG+GGG 0.599950 3.2:+66928170 MS.gene022490:CDS
CCCAGCAGCTTGGTTGAACG+TGG 0.607250 3.2:+66927170 MS.gene022490:CDS
GTTGACGAGTCCAAGAATAA+CGG 0.609102 3.2:-66927471 None:intergenic
AGATTCTTGTTCATTACGGG+TGG 0.611668 3.2:+66927542 MS.gene022490:CDS
GAAGGCACCAATTGTCATCA+CGG 0.622211 3.2:-66927132 None:intergenic
AAAAGCAGTTGAGACTAGGA+TGG 0.625099 3.2:-66927501 None:intergenic
GATATTCTAAGAAAGGCAGC+TGG 0.631809 3.2:+66926338 MS.gene022490:CDS
CGTGACTGCCAAGCACACAT+GGG 0.636076 3.2:+66927070 MS.gene022490:CDS
ACTCTCTCTTGGACTAGCAG+TGG 0.636345 3.2:+66927100 MS.gene022490:CDS
TTCAGGAGGTGTTACAACAA+TGG 0.637356 3.2:+66926289 MS.gene022490:intron
ATTCTTCATAGGAGTTGGCG+TGG 0.640365 3.2:+66927025 MS.gene022490:CDS
GCTGGTGCTGCTATTAATGG+CGG 0.645779 3.2:+66926521 MS.gene022490:CDS
AGAAATACCATCGTGTTGGG+TGG 0.646781 3.2:+66926485 MS.gene022490:CDS
TCTGTGGGTTTAGGAAACAA+TGG 0.653625 3.2:+66927434 MS.gene022490:CDS
ATCGCTCCACCAAAGTGGCG+AGG 0.654195 3.2:+66926981 MS.gene022490:CDS
ACTGGACAAAGTATAGCAGT+TGG 0.655773 3.2:+66927993 MS.gene022490:CDS
CCAAGACCAACCGAAACCTG+CGG 0.656275 3.2:-66927916 None:intergenic
CTTGGAATTAGCCAGGTGAG+TGG 0.659267 3.2:-66927942 None:intergenic
TTGAGACTAGGATGGAAGCA+AGG 0.659590 3.2:-66927493 None:intergenic
ACAAGGTTGAAAATGGCAGG+TGG 0.665030 3.2:+66925645 None:intergenic
GCAAATGCCATGATTAAGTG+AGG 0.668086 3.2:-66927344 None:intergenic
GGGTGTGTCGGATATGAGGA+AGG 0.669650 3.2:-66927150 None:intergenic
GTGACTGCCAAGCACACATG+GGG 0.687081 3.2:+66927071 MS.gene022490:CDS
GATGACACCACCCAACACGA+TGG 0.705787 3.2:-66926492 None:intergenic
GACTGGTGTTGATGGTACAA+AGG 0.706853 3.2:+66927842 MS.gene022490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAGTTAAACTAAAAAAA+GGG - chr3.2:66926715-66926734 None:intergenic 10.0%
!! TAAATAATATTATACACATA+TGG - chr3.2:66927607-66927626 None:intergenic 10.0%
!! TTATATTTATTTATTGTTCT+AGG + chr3.2:66927624-66927643 MS.gene022490:intron 10.0%
!! TTTATAATGAAAAAACAAAA+AGG - chr3.2:66925801-66925820 None:intergenic 10.0%
!! AAAAGTTAAACTAAAAAAAG+GGG - chr3.2:66926714-66926733 None:intergenic 15.0%
!! CTAAAAGTTAAACTAAAAAA+AGG - chr3.2:66926716-66926735 None:intergenic 15.0%
!!! AACATTTTTCATTAGTAAAA+AGG - chr3.2:66926263-66926282 None:intergenic 15.0%
!!! ACATTTTTCATTAGTAAAAA+GGG - chr3.2:66926262-66926281 None:intergenic 15.0%
!!! AGTAGAAAGATTTTAAATAA+AGG - chr3.2:66926864-66926883 None:intergenic 15.0%
!! TAGATGGAGAAATTAAAATA+AGG - chr3.2:66927735-66927754 None:intergenic 20.0%
!! TGAAAAATGTTATCAAATTC+AGG + chr3.2:66926272-66926291 MS.gene022490:intron 20.0%
!! TTAGTAGTACAAATCTAAAT+AGG + chr3.2:66926144-66926163 MS.gene022490:intron 20.0%
!!! AACATTGCTATTTAAAATTG+CGG - chr3.2:66926739-66926758 None:intergenic 20.0%
!!! AAGCAAATTCATTTTAAACA+TGG - chr3.2:66926905-66926924 None:intergenic 20.0%
!!! TTTTATCTTCAAAATGTACT+TGG + chr3.2:66926211-66926230 MS.gene022490:intron 20.0%
! AAAATGTTATCAAATTCAGG+AGG + chr3.2:66926275-66926294 MS.gene022490:intron 25.0%
! AGTACAAATCTAAATAGGTT+TGG + chr3.2:66926149-66926168 MS.gene022490:intron 25.0%
! ATATAACTCGAGAATTAAAC+TGG + chr3.2:66926002-66926021 MS.gene022490:intron 25.0%
! ATTGTATTACATGATGCAAT+TGG + chr3.2:66926929-66926948 MS.gene022490:intron 25.0%
! ATTTCTCAATAAATTCTTCC+CGG + chr3.2:66926316-66926335 MS.gene022490:CDS 25.0%
! TAAACTAAAAAAAGGGGAAA+TGG - chr3.2:66926708-66926727 None:intergenic 25.0%
! TAAAGGATGCTATCAAAATT+TGG - chr3.2:66926847-66926866 None:intergenic 25.0%
! TAAGGACGAAAATTTAGATA+CGG - chr3.2:66927717-66927736 None:intergenic 25.0%
!! TTTCTTGTTCTATGCATTTT+GGG + chr3.2:66928088-66928107 MS.gene022490:CDS 25.0%
!!! TTTTATTTTGTTGACGATGT+TGG - chr3.2:66926659-66926678 None:intergenic 25.0%
AATATTGCTATGCTCATTCT+TGG + chr3.2:66926551-66926570 MS.gene022490:CDS 30.0%
AATTAACTACAGAAAGATCG+TGG + chr3.2:66927677-66927696 MS.gene022490:intron 30.0%
AGATCACTATTTGAATCACA+TGG + chr3.2:66925959-66925978 MS.gene022490:intron 30.0%
AGCAAAAAACATGCTCTAAT+TGG - chr3.2:66925832-66925851 None:intergenic 30.0%
AGTTAGAAGAACTCATTAAG+TGG + chr3.2:66927258-66927277 MS.gene022490:CDS 30.0%
ATTATTAGTACCAATACCAC+AGG - chr3.2:66927767-66927786 None:intergenic 30.0%
CCTGTAAACTGTTGAAAAAA+CGG - chr3.2:66927374-66927393 None:intergenic 30.0%
CTGTAAACTGTTGAAAAAAC+GGG - chr3.2:66927373-66927392 None:intergenic 30.0%
CTTAATGAGTTCTTCTAACT+CGG - chr3.2:66927258-66927277 None:intergenic 30.0%
GAGTCAATGTACATTATATG+GGG + chr3.2:66928170-66928189 MS.gene022490:CDS 30.0%
GCATAAATATCATAACCTTG+TGG + chr3.2:66926820-66926839 MS.gene022490:intron 30.0%
GGAGTCAATGTACATTATAT+GGG + chr3.2:66928169-66928188 MS.gene022490:CDS 30.0%
GGGAAGAATTTATTGAGAAA+TGG - chr3.2:66926317-66926336 None:intergenic 30.0%
TCATTCTTGGATATGACATT+GGG + chr3.2:66925760-66925779 MS.gene022490:CDS 30.0%
TCGAAGATTCTTGTTCATTA+CGG + chr3.2:66927538-66927557 MS.gene022490:CDS 30.0%
TGATTCAAATAGTGATCTAC+TGG - chr3.2:66925957-66925976 None:intergenic 30.0%
TGGAGTCAATGTACATTATA+TGG + chr3.2:66928168-66928187 MS.gene022490:CDS 30.0%
TTAATGAGTTCTTCTAACTC+GGG - chr3.2:66927257-66927276 None:intergenic 30.0%
TTACATGATGCAATTGGAAA+AGG + chr3.2:66926935-66926954 MS.gene022490:intron 30.0%
TTTAAGGGGAAAATTTCACT+TGG - chr3.2:66927963-66927982 None:intergenic 30.0%
! ATCTTTAAGAACAAGAATCG+CGG - chr3.2:66926763-66926782 None:intergenic 30.0%
! CCAGTTGTTCTGATTTTTAA+GGG - chr3.2:66927978-66927997 None:intergenic 30.0%
! CTTTCTTGTTCTATGCATTT+TGG + chr3.2:66928087-66928106 MS.gene022490:CDS 30.0%
! TCCAGTTGTTCTGATTTTTA+AGG - chr3.2:66927979-66927998 None:intergenic 30.0%
!! AAAGCATTGCAAAAAATCAG+AGG + chr3.2:66927212-66927231 MS.gene022490:CDS 30.0%
!! CAGTTGTTCTGATTTTTAAG+GGG - chr3.2:66927977-66927996 None:intergenic 30.0%
!!! CGTTTTTTCAACAGTTTACA+GGG + chr3.2:66927372-66927391 MS.gene022490:CDS 30.0%
AATTTCACTTGGAATTAGCC+AGG - chr3.2:66927952-66927971 None:intergenic 35.0%
ACATTATATGGGGCAAACAT+TGG + chr3.2:66928180-66928199 MS.gene022490:CDS 35.0%
AGTCATTATACCTGTGGTAT+TGG + chr3.2:66927754-66927773 MS.gene022490:intron 35.0%
ATATCGACCTCACTTAATCA+TGG + chr3.2:66927337-66927356 MS.gene022490:CDS 35.0%
ATTCTTGGTCGTATTCTTCT+TGG + chr3.2:66926566-66926585 MS.gene022490:CDS 35.0%
CCCTTAAAAATCAGAACAAC+TGG + chr3.2:66927975-66927994 MS.gene022490:CDS 35.0%
CGAAGATTCTTGTTCATTAC+GGG + chr3.2:66927539-66927558 MS.gene022490:CDS 35.0%
CTATCAAAATTTGGACCACA+AGG - chr3.2:66926838-66926857 None:intergenic 35.0%
CTCATTCTTGGATATGACAT+TGG + chr3.2:66925759-66925778 MS.gene022490:CDS 35.0%
CTCTCAAAGATGGTCATAAA+TGG - chr3.2:66927314-66927333 None:intergenic 35.0%
GATCAATCATTGTTGTATCG+TGG + chr3.2:66926789-66926808 MS.gene022490:intron 35.0%
TATCTTTCCATCAAAGCCAT+TGG - chr3.2:66925694-66925713 None:intergenic 35.0%
TCGATATTGTCTCTCAAAGA+TGG - chr3.2:66927324-66927343 None:intergenic 35.0%
TTACTTTCTGCCGTTATTCT+TGG + chr3.2:66927461-66927480 MS.gene022490:CDS 35.0%
TTCCAATTCTTCATAGGAGT+TGG + chr3.2:66927020-66927039 MS.gene022490:CDS 35.0%
! TTCTTTTTACCTGAGACCAA+AGG + chr3.2:66928137-66928156 MS.gene022490:CDS 35.0%
!! GTCGTATTCTTCTTGGTTTT+GGG + chr3.2:66926573-66926592 MS.gene022490:CDS 35.0%
!!! ATTCTTCTTGGTTTTGGGAT+CGG + chr3.2:66926578-66926597 MS.gene022490:CDS 35.0%
!!! CCGTTTTTTCAACAGTTTAC+AGG + chr3.2:66927371-66927390 MS.gene022490:CDS 35.0%
!!! GATTTTTTGCAATGCTTTCC+TGG - chr3.2:66927210-66927229 None:intergenic 35.0%
AAAAGCAGTTGAGACTAGGA+TGG - chr3.2:66927504-66927523 None:intergenic 40.0%
AAAGCAATTCCTTTGGTCTC+AGG - chr3.2:66928149-66928168 None:intergenic 40.0%
ACAGGCTTCCAATTCTTCAT+AGG + chr3.2:66927014-66927033 MS.gene022490:CDS 40.0%
ACCAAACCTCTTTCAATCTG+TGG + chr3.2:66927418-66927437 MS.gene022490:CDS 40.0%
ACTGGACAAAGTATAGCAGT+TGG + chr3.2:66927993-66928012 MS.gene022490:CDS 40.0%
AGATTCTTGTTCATTACGGG+TGG + chr3.2:66927542-66927561 MS.gene022490:CDS 40.0%
CATGATGCAATTGGAAAAGG+CGG + chr3.2:66926938-66926957 MS.gene022490:intron 40.0%
CATTCTATTGCTTGTCTGTC+TGG + chr3.2:66927565-66927584 MS.gene022490:CDS 40.0%
CCAAACCTCTTTCAATCTGT+GGG + chr3.2:66927419-66927438 MS.gene022490:CDS 40.0%
CCACAGGTATAATGACTAGA+TGG - chr3.2:66927751-66927770 None:intergenic 40.0%
CCATCTAGTCATTATACCTG+TGG + chr3.2:66927748-66927767 MS.gene022490:intron 40.0%
CGAAGAAATACCATCGTGTT+GGG + chr3.2:66926482-66926501 MS.gene022490:CDS 40.0%
CTAAACCCACAGATTGAAAG+AGG - chr3.2:66927427-66927446 None:intergenic 40.0%
CTCTTTCAATCTGTGGGTTT+AGG + chr3.2:66927425-66927444 MS.gene022490:CDS 40.0%
CTGCCTTTCTTAGAATATCC+GGG - chr3.2:66926337-66926356 None:intergenic 40.0%
GCAAATGCCATGATTAAGTG+AGG - chr3.2:66927347-66927366 None:intergenic 40.0%
GCTGCCTTTCTTAGAATATC+CGG - chr3.2:66926338-66926357 None:intergenic 40.0%
GGATATGACATTGGGATTTC+AGG + chr3.2:66925768-66925787 MS.gene022490:CDS 40.0%
GGGCAATGCAACATTAGTAT+TGG + chr3.2:66927875-66927894 MS.gene022490:CDS 40.0%
GGTACAAAGGACATGTCAAA+GGG + chr3.2:66927855-66927874 MS.gene022490:CDS 40.0%
GTTGACGAGTCCAAGAATAA+CGG - chr3.2:66927474-66927493 None:intergenic 40.0%
TATGGGGCAAACATTGGTAT+TGG + chr3.2:66928186-66928205 MS.gene022490:CDS 40.0%
TCGAAGAAATACCATCGTGT+TGG + chr3.2:66926481-66926500 MS.gene022490:CDS 40.0%
TCTGTGGGTTTAGGAAACAA+TGG + chr3.2:66927434-66927453 MS.gene022490:CDS 40.0%
TGACTCCAAAGCAATTCCTT+TGG - chr3.2:66928156-66928175 None:intergenic 40.0%
TGAGACCAAAGGAATTGCTT+TGG + chr3.2:66928148-66928167 MS.gene022490:CDS 40.0%
TGGTACAAAGGACATGTCAA+AGG + chr3.2:66927854-66927873 MS.gene022490:CDS 40.0%
TTTCCATCAAAGCCATTGGA+AGG - chr3.2:66925690-66925709 None:intergenic 40.0%
! AAGGGTGAGCTTTATGACTT+TGG - chr3.2:66926244-66926263 None:intergenic 40.0%
! ATGCTATGCCACTTCAAGTT+TGG + chr3.2:66928062-66928081 MS.gene022490:CDS 40.0%
! CTTCCCGGATATTCTAAGAA+AGG + chr3.2:66926331-66926350 MS.gene022490:CDS 40.0%
! GATATTCTAAGAAAGGCAGC+TGG + chr3.2:66926338-66926357 MS.gene022490:CDS 40.0%
! GATCTACTGGTTAGTGACTT+TGG - chr3.2:66925944-66925963 None:intergenic 40.0%
! GCGATTTCAGAAAGGTATAG+TGG - chr3.2:66926966-66926985 None:intergenic 40.0%
! GGTCGTATTCTTCTTGGTTT+TGG + chr3.2:66926572-66926591 MS.gene022490:CDS 40.0%
! TTACTATGTTTCTATGCCGC+AGG + chr3.2:66927900-66927919 MS.gene022490:CDS 40.0%
!! AGAAAGCACCAAACTTGAAG+TGG - chr3.2:66928073-66928092 None:intergenic 40.0%
!! GTTGACGCTTTGAAAGATTG+CGG + chr3.2:66927797-66927816 MS.gene022490:intron 40.0%
!! TATTGGCGGCAGTTTGTTAA+AGG + chr3.2:66928203-66928222 MS.gene022490:CDS 40.0%
!! TCTCAACTGCTTTTGTCGAT+CGG + chr3.2:66927510-66927529 MS.gene022490:CDS 40.0%
!! TTCAGGAGGTGTTACAACAA+TGG + chr3.2:66926289-66926308 MS.gene022490:intron 40.0%
AGAAATACCATCGTGTTGGG+TGG + chr3.2:66926485-66926504 MS.gene022490:CDS 45.0%
AGCAAAGTCACTGCAGCTAT+CGG + chr3.2:66926458-66926477 MS.gene022490:CDS 45.0%
ATTCTTCATAGGAGTTGGCG+TGG + chr3.2:66927025-66927044 MS.gene022490:CDS 45.0%
ATTGTTGTATCGTGGTCGCT+GGG + chr3.2:66926797-66926816 MS.gene022490:intron 45.0%
CCCACAGATTGAAAGAGGTT+TGG - chr3.2:66927422-66927441 None:intergenic 45.0%
CGACAAAAGCAGTTGAGACT+AGG - chr3.2:66927508-66927527 None:intergenic 45.0%
CGCCAACTCCTATGAAGAAT+TGG - chr3.2:66927025-66927044 None:intergenic 45.0%
TGTATCGTTGCTGCATCTAG+TGG + chr3.2:66925735-66925754 MS.gene022490:CDS 45.0%
TTGAGACTAGGATGGAAGCA+AGG - chr3.2:66927496-66927515 None:intergenic 45.0%
TTGGAATTAGCCAGGTGAGT+GGG - chr3.2:66927944-66927963 None:intergenic 45.0%
TTGGTGGAGCGATTTCAGAA+AGG - chr3.2:66926974-66926993 None:intergenic 45.0%
TTTGCAATGCTTTCCTGGCT+TGG - chr3.2:66927205-66927224 None:intergenic 45.0%
! TGTTTCTATGCCGCAGGTTT+CGG + chr3.2:66927906-66927925 MS.gene022490:CDS 45.0%
!! ACTGCTTTTGTCGATCGGTT+TGG + chr3.2:66927515-66927534 MS.gene022490:CDS 45.0%
!! CTTGCTGGTGCTGCTATTAA+TGG + chr3.2:66926518-66926537 MS.gene022490:CDS 45.0%
!! GAAGGCACCAATTGTCATCA+CGG - chr3.2:66927135-66927154 None:intergenic 45.0%
!! GACTGGTGTTGATGGTACAA+AGG + chr3.2:66927842-66927861 MS.gene022490:CDS 45.0%
!! GCATCTAGTGGACTCATTCT+TGG + chr3.2:66925747-66925766 MS.gene022490:CDS 45.0%
CATTGTTGTATCGTGGTCGC+TGG + chr3.2:66926796-66926815 MS.gene022490:intron 50.0%
CTGAAATCGCTCCACCAAAG+TGG + chr3.2:66926976-66926995 MS.gene022490:CDS 50.0%
CTTGGAATTAGCCAGGTGAG+TGG - chr3.2:66927945-66927964 None:intergenic 50.0%
GCCATTGATGCACCTTCCAA+TGG + chr3.2:66925675-66925694 MS.gene022490:CDS 50.0%
GGTTAGTGACTTTGGCGAGT+CGG - chr3.2:66925936-66925955 None:intergenic 50.0%
TAACTCGGGCTCAACATCGA+TGG - chr3.2:66927243-66927262 None:intergenic 50.0%
TTGTTGTATCGTGGTCGCTG+GGG + chr3.2:66926798-66926817 MS.gene022490:intron 50.0%
! GCCATTGGAAGGTGCATCAA+TGG - chr3.2:66925679-66925698 None:intergenic 50.0%
! GGGGCAAACATTGGTATTGG+CGG + chr3.2:66928189-66928208 MS.gene022490:CDS 50.0%
! GGTGTCTGCTTTGCTAGCTT+TGG + chr3.2:66927818-66927837 MS.gene022490:CDS 50.0%
!! ACTCTCTCTTGGACTAGCAG+TGG + chr3.2:66927100-66927119 MS.gene022490:CDS 50.0%
!! GCACCTTCCAATGGCTTTGA+TGG + chr3.2:66925684-66925703 MS.gene022490:CDS 50.0%
!! GCTGGTGCTGCTATTAATGG+CGG + chr3.2:66926521-66926540 MS.gene022490:CDS 50.0%
!! GGTGGTGTCATCTTTCTTGC+TGG + chr3.2:66926503-66926522 MS.gene022490:CDS 50.0%
AACCAAGCTGCTGGGTGTGT+CGG - chr3.2:66927165-66927184 None:intergenic 55.0%
ACGTGACTGCCAAGCACACA+TGG + chr3.2:66927069-66927088 MS.gene022490:CDS 55.0%
CCAAGACCAACCGAAACCTG+CGG - chr3.2:66927919-66927938 None:intergenic 55.0%
CCAATTGTCATCACGGCTGC+AGG - chr3.2:66927128-66927147 None:intergenic 55.0%
CCACGTTCAACCAAGCTGCT+GGG - chr3.2:66927173-66927192 None:intergenic 55.0%
CCTGCAGCCGTGATGACAAT+TGG + chr3.2:66927125-66927144 MS.gene022490:CDS 55.0%
CGTGACTGCCAAGCACACAT+GGG + chr3.2:66927070-66927089 MS.gene022490:CDS 55.0%
GATGACACCACCCAACACGA+TGG - chr3.2:66926495-66926514 None:intergenic 55.0%
GGGTGTGTCGGATATGAGGA+AGG - chr3.2:66927153-66927172 None:intergenic 55.0%
GTGACTGCCAAGCACACATG+GGG + chr3.2:66927071-66927090 MS.gene022490:CDS 55.0%
GTGGCATGATAGACCAAGCC+AGG + chr3.2:66927189-66927208 MS.gene022490:CDS 55.0%
TCTATGCCGCAGGTTTCGGT+TGG + chr3.2:66927910-66927929 MS.gene022490:CDS 55.0%
TGCTGGGTGTGTCGGATATG+AGG - chr3.2:66927157-66927176 None:intergenic 55.0%
! AAAGCACCTCGCCACTTTGG+TGG - chr3.2:66926990-66927009 None:intergenic 55.0%
! GCTTTGGCGACTGGTGTTGA+TGG + chr3.2:66927834-66927853 MS.gene022490:CDS 55.0%
!! CGCAGGTTTCGGTTGGTCTT+GGG + chr3.2:66927917-66927936 MS.gene022490:CDS 55.0%
!! CTGAAAGCACCTCGCCACTT+TGG - chr3.2:66926993-66927012 None:intergenic 55.0%
!! GCAGGTTTCGGTTGGTCTTG+GGG + chr3.2:66927918-66927937 MS.gene022490:CDS 55.0%
!! GCTTTGCTAGCTTTGGCGAC+TGG + chr3.2:66927825-66927844 MS.gene022490:CDS 55.0%
ATCCGACACACCCAGCAGCT+TGG + chr3.2:66927160-66927179 MS.gene022490:CDS 60.0%
ATCGCTCCACCAAAGTGGCG+AGG + chr3.2:66926981-66927000 MS.gene022490:CDS 60.0%
CCCAGCAGCTTGGTTGAACG+TGG + chr3.2:66927170-66927189 MS.gene022490:CDS 60.0%
GCCACGTTCAACCAAGCTGC+TGG - chr3.2:66927174-66927193 None:intergenic 60.0%
! TGGCGAGGTGCTTTCAGCAC+AGG + chr3.2:66926996-66927015 MS.gene022490:CDS 60.0%
!! CCGCAGGTTTCGGTTGGTCT+TGG + chr3.2:66927916-66927935 MS.gene022490:CDS 60.0%
CTGCCAAGCACACATGGGGC+TGG + chr3.2:66927075-66927094 MS.gene022490:CDS 65.0%
TCGCCAGCCCCATGTGTGCT+TGG - chr3.2:66927081-66927100 None:intergenic 65.0%
! TGGGGCTGGCGACTCTCTCT+TGG + chr3.2:66927089-66927108 MS.gene022490:CDS 65.0%
GGTCTTGGGGCCCACTCACC+TGG + chr3.2:66927931-66927950 MS.gene022490:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 66925657 66928253 66925657 ID=MS.gene022490
chr3.2 mRNA 66925657 66928253 66925657 ID=MS.gene022490.t1;Parent=MS.gene022490
chr3.2 exon 66925657 66925789 66925657 ID=MS.gene022490.t1.exon1;Parent=MS.gene022490.t1
chr3.2 CDS 66925657 66925789 66925657 ID=cds.MS.gene022490.t1;Parent=MS.gene022490.t1
chr3.2 exon 66926294 66926613 66926294 ID=MS.gene022490.t1.exon2;Parent=MS.gene022490.t1
chr3.2 CDS 66926294 66926613 66926294 ID=cds.MS.gene022490.t1;Parent=MS.gene022490.t1
chr3.2 exon 66926957 66927586 66926957 ID=MS.gene022490.t1.exon3;Parent=MS.gene022490.t1
chr3.2 CDS 66926957 66927586 66926957 ID=cds.MS.gene022490.t1;Parent=MS.gene022490.t1
chr3.2 exon 66927813 66928253 66927813 ID=MS.gene022490.t1.exon4;Parent=MS.gene022490.t1
chr3.2 CDS 66927813 66928253 66927813 ID=cds.MS.gene022490.t1;Parent=MS.gene022490.t1
Gene Sequence

>MS.gene022490

ATGGCAGGTGGAGGGTTTGCCATTGATGCACCTTCCAATGGCTTTGATGGAAAGATAACACTCTCAGTTATCATTACTTGTATCGTTGCTGCATCTAGTGGACTCATTCTTGGATATGACATTGGGATTTCAGGTTTTCTTCCTTTTTGTTTTTTCATTATAAAGTATTCATCCAATTAGAGCATGTTTTTTGCTTTCTAAAGTATCTTGTATTATTCTGCTACATCAATCTTTGCTCAAAAATGAAAGAAAATGTTTTAAACAATGTTTCAGAAACCGACTCGCCAAAGTCACTAACCAGTAGATCACTATTTGAATCACATGGTTAAATTGAATAATTTGATCATATAACTCGAGAATTAAACTGGACTCAGCACGATGTTCGTTTATGTAGAAAATTCTAAAAAAAATTTTATATCTATAAAATGTCAAAATCATTAGAGAAATTAACATTATTGCACAAGCTCAATCTTCAAATTTAAAACTTTTAGTAGTACAAATCTAAATAGGTTTGGACAAAGTCTAATTGCATGATGCTATATATATTTTTTGCATTTTATCTTCAAAATGTACTTGGAGAAGAACCAAAGTCATAAAGCTCACCCTTTTTACTAATGAAAAATGTTATCAAATTCAGGAGGTGTTACAACAATGGTGCCATTTCTCAATAAATTCTTCCCGGATATTCTAAGAAAGGCAGCTGGTACTGAAGTAAACATGTACTGTGTGTATGACAGTCAAATGTTGACATTGTTTACGTCTTCTCTGTATTTAGCTGCGTTAGTGTCAACTCTTGTAGCTAGCAAAGTCACTGCAGCTATCGGTCGAAGAAATACCATCGTGTTGGGTGGTGTCATCTTTCTTGCTGGTGCTGCTATTAATGGCGGTTCTGAAAATATTGCTATGCTCATTCTTGGTCGTATTCTTCTTGGTTTTGGGATCGGTTTCTCTAGTCAAGTAAGTGAACATATACAATTATACACATTTGTTAATAGTAGTCCAACATCGTCAACAAAATAAAATATTCTATTATACATAAGCATTGAGACCATTTCCCCTTTTTTTAGTTTAACTTTTAGCCGCAATTTTAAATAGCAATGTTGCCGCGATTCTTGTTCTTAAAGATAATTGTGATCAATCATTGTTGTATCGTGGTCGCTGGGGCATAAATATCATAACCTTGTGGTCCAAATTTTGATAGCATCCTTTATTTAAAATCTTTCTACTAACTTTTAACTTAAGAAACCATGTTTAAAATGAATTTGCTTGCTAATTGTATTACATGATGCAATTGGAAAAGGCGGCTCCACTATACCTTTCTGAAATCGCTCCACCAAAGTGGCGAGGTGCTTTCAGCACAGGCTTCCAATTCTTCATAGGAGTTGGCGTGGTTGCTGCATGTTGCATAAATTACGTGACTGCCAAGCACACATGGGGCTGGCGACTCTCTCTTGGACTAGCAGTGGTGCCTGCAGCCGTGATGACAATTGGTGCCTTCCTCATATCCGACACACCCAGCAGCTTGGTTGAACGTGGCATGATAGACCAAGCCAGGAAAGCATTGCAAAAAATCAGAGGATCATCCATCGATGTTGAGCCCGAGTTAGAAGAACTCATTAAGTGGACAGAAATTTCGAAAGCAGTGCAACAAGAGCCATTTATGACCATCTTTGAGAGACAATATCGACCTCACTTAATCATGGCATTTGCAATCCCGTTTTTTCAACAGTTTACAGGGATCAACATCGTCGCTTTCTATTCACCAAACCTCTTTCAATCTGTGGGTTTAGGAAACAATGGTGCTTTACTTTCTGCCGTTATTCTTGGACTCGTCAACCTTGCTTCCATCCTAGTCTCAACTGCTTTTGTCGATCGGTTTGGTCGAAGATTCTTGTTCATTACGGGTGGCATTCTATTGCTTGTCTGTCTGGTAAGCAAATTAAGCAACCATATGTGTATAATATTATTTATATTTATTTATTGTTCTAGGTTTTTCATAATCTCAACTACTAAATAAATGAATTAACTACAGAAAGATCGTGGTACTAATGCTTTTTCCGTATCTAAATTTTCGTCCTTATTTTAATTTCTCCATCTAGTCATTATACCTGTGGTATTGGTACTAATAATTATAATTTGTGTTGACGCTTTGAAAGATTGCGGTGTCTGCTTTGCTAGCTTTGGCGACTGGTGTTGATGGTACAAAGGACATGTCAAAGGGCAATGCAACATTAGTATTGGTTTTACTATGTTTCTATGCCGCAGGTTTCGGTTGGTCTTGGGGCCCACTCACCTGGCTAATTCCAAGTGAAATTTTCCCCTTAAAAATCAGAACAACTGGACAAAGTATAGCAGTTGGTGTACAATTCATAATCTTGTTTGTGTTATCACAAACATTCTTGACAATGCTATGCCACTTCAAGTTTGGTGCTTTCTTGTTCTATGCATTTTGGGTTGCAGTGATGACTCTATTTATTATTTTCTTTTTACCTGAGACCAAAGGAATTGCTTTGGAGTCAATGTACATTATATGGGGCAAACATTGGTATTGGCGGCAGTTTGTTAAAGGAGAAGTTGATAAAAACAATCTTCCATGA
Protein sequence

>MS.gene022490.t1

MAGGGFAIDAPSNGFDGKITLSVIITCIVAASSGLILGYDIGISGGVTTMVPFLNKFFPDILRKAAGTEVNMYCVYDSQMLTLFTSSLYLAALVSTLVASKVTAAIGRRNTIVLGGVIFLAGAAINGGSENIAMLILGRILLGFGIGFSSQAAPLYLSEIAPPKWRGAFSTGFQFFIGVGVVAACCINYVTAKHTWGWRLSLGLAVVPAAVMTIGAFLISDTPSSLVERGMIDQARKALQKIRGSSIDVEPELEELIKWTEISKAVQQEPFMTIFERQYRPHLIMAFAIPFFQQFTGINIVAFYSPNLFQSVGLGNNGALLSAVILGLVNLASILVSTAFVDRFGRRFLFITGGILLLVCLIAVSALLALATGVDGTKDMSKGNATLVLVLLCFYAAGFGWSWGPLTWLIPSEIFPLKIRTTGQSIAVGVQFIILFVLSQTFLTMLCHFKFGAFLFYAFWVAVMTLFIIFFLPETKGIALESMYIIWGKHWYWRQFVKGEVDKNNLP