Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026390.t1 | XP_013466729.1 | 96.4 | 663 | 22 | 1 | 1 | 663 | 1 | 661 | 0.00E+00 | 1313.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026390.t1 | Q9XIA9 | 67.0 | 658 | 211 | 6 | 9 | 663 | 11 | 665 | 7.8e-272 | 937.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026390.t1 | A0A072VRL7 | 96.4 | 663 | 22 | 1 | 1 | 663 | 1 | 661 | 0.0e+00 | 1313.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99632 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene25695 | PPI |
| MS.gene026390 | MS.gene20877 | PPI |
| MS.gene07328 | MS.gene026390 | PPI |
| MS.gene026629 | MS.gene026390 | PPI |
| MS.gene90444 | MS.gene026390 | PPI |
| MS.gene21662 | MS.gene026390 | PPI |
| MS.gene55795 | MS.gene026390 | PPI |
| MS.gene75435 | MS.gene026390 | PPI |
| MS.gene072726 | MS.gene026390 | PPI |
| MS.gene045073 | MS.gene026390 | PPI |
| MS.gene21663 | MS.gene026390 | PPI |
| MS.gene71307 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene048924 | PPI |
| MS.gene06068 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene80076 | PPI |
| MS.gene28831 | MS.gene026390 | PPI |
| MS.gene22309 | MS.gene026390 | PPI |
| MS.gene70469 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene044334 | PPI |
| MS.gene22308 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene005494 | PPI |
| MS.gene072680 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene33594 | PPI |
| MS.gene050419 | MS.gene026390 | PPI |
| MS.gene07080 | MS.gene026390 | PPI |
| MS.gene026390 | MS.gene63009 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026390.t1 | MTR_1g034360 | 96.380 | 663 | 22 | 1 | 1 | 663 | 1 | 661 | 0.0 | 1330 |
| MS.gene026390.t1 | MTR_4g068670 | 79.576 | 661 | 131 | 3 | 1 | 661 | 1 | 657 | 0.0 | 1122 |
| MS.gene026390.t1 | MTR_5g009350 | 56.798 | 662 | 282 | 3 | 3 | 663 | 4 | 662 | 0.0 | 800 |
| MS.gene026390.t1 | MTR_8g099420 | 56.707 | 656 | 280 | 3 | 5 | 659 | 7 | 659 | 0.0 | 794 |
| MS.gene026390.t1 | MTR_5g009350 | 57.496 | 647 | 271 | 3 | 3 | 648 | 4 | 647 | 0.0 | 791 |
| MS.gene026390.t1 | MTR_5g009360 | 56.881 | 654 | 276 | 4 | 5 | 656 | 6 | 655 | 0.0 | 787 |
| MS.gene026390.t1 | MTR_5g009350 | 56.137 | 554 | 239 | 3 | 3 | 555 | 4 | 554 | 0.0 | 657 |
| MS.gene026390.t1 | MTR_5g009350 | 56.777 | 546 | 232 | 3 | 3 | 547 | 4 | 546 | 0.0 | 656 |
| MS.gene026390.t1 | MTR_7g109830 | 48.788 | 660 | 332 | 4 | 5 | 662 | 4 | 659 | 0.0 | 649 |
| MS.gene026390.t1 | MTR_5g009360 | 57.663 | 522 | 216 | 3 | 137 | 656 | 11 | 529 | 0.0 | 645 |
| MS.gene026390.t1 | MTR_1g086600 | 46.526 | 662 | 346 | 5 | 5 | 662 | 26 | 683 | 0.0 | 615 |
| MS.gene026390.t1 | MTR_1g104810 | 40.422 | 616 | 347 | 9 | 48 | 657 | 18 | 619 | 1.92e-150 | 450 |
| MS.gene026390.t1 | MTR_1g104810 | 39.938 | 641 | 362 | 11 | 26 | 657 | 60 | 686 | 8.29e-149 | 448 |
| MS.gene026390.t1 | MTR_3g082660 | 32.730 | 663 | 388 | 17 | 36 | 655 | 79 | 726 | 1.13e-94 | 308 |
| MS.gene026390.t1 | MTR_3g087980 | 29.678 | 684 | 423 | 15 | 12 | 655 | 27 | 692 | 3.59e-87 | 287 |
| MS.gene026390.t1 | MTR_1g030290 | 30.894 | 615 | 369 | 15 | 74 | 655 | 103 | 694 | 4.98e-87 | 287 |
| MS.gene026390.t1 | MTR_3g084470 | 26.276 | 666 | 405 | 23 | 48 | 656 | 79 | 715 | 1.42e-45 | 173 |
| MS.gene026390.t1 | MTR_3g084450 | 25.296 | 676 | 402 | 23 | 48 | 656 | 81 | 720 | 1.54e-45 | 173 |
| MS.gene026390.t1 | MTR_3g084450 | 28.425 | 489 | 272 | 17 | 219 | 656 | 51 | 512 | 2.21e-40 | 155 |
| MS.gene026390.t1 | MTR_8g083170 | 24.361 | 665 | 424 | 19 | 48 | 656 | 83 | 724 | 5.72e-38 | 150 |
| MS.gene026390.t1 | MTR_4g057730 | 24.449 | 544 | 311 | 20 | 20 | 545 | 3 | 464 | 4.27e-25 | 109 |
| MS.gene026390.t1 | MTR_4g057730 | 24.449 | 544 | 311 | 20 | 20 | 545 | 3 | 464 | 4.79e-25 | 110 |
| MS.gene026390.t1 | MTR_4g057730 | 24.521 | 522 | 295 | 19 | 20 | 523 | 3 | 443 | 1.02e-24 | 108 |
| MS.gene026390.t1 | MTR_2g095510 | 24.118 | 510 | 288 | 20 | 52 | 545 | 35 | 461 | 1.15e-22 | 102 |
| MS.gene026390.t1 | MTR_2g095510 | 24.180 | 488 | 272 | 19 | 52 | 523 | 35 | 440 | 1.92e-22 | 101 |
| MS.gene026390.t1 | MTR_8g074120 | 24.826 | 431 | 247 | 15 | 133 | 545 | 47 | 418 | 4.95e-21 | 97.4 |
| MS.gene026390.t1 | MTR_1g063110 | 25.000 | 376 | 208 | 16 | 192 | 550 | 157 | 475 | 7.28e-20 | 94.0 |
| MS.gene026390.t1 | MTR_4g011790 | 23.139 | 497 | 290 | 15 | 103 | 568 | 115 | 550 | 1.31e-19 | 93.6 |
| MS.gene026390.t1 | MTR_5g007640 | 23.589 | 496 | 275 | 16 | 80 | 550 | 98 | 514 | 1.03e-18 | 90.5 |
| MS.gene026390.t1 | MTR_8g074040 | 23.225 | 521 | 308 | 20 | 52 | 545 | 52 | 507 | 1.15e-18 | 90.5 |
| MS.gene026390.t1 | MTR_4g011790 | 23.061 | 490 | 290 | 15 | 103 | 568 | 115 | 541 | 1.76e-18 | 90.1 |
| MS.gene026390.t1 | MTR_4g011790 | 23.061 | 490 | 290 | 15 | 103 | 568 | 115 | 541 | 1.77e-18 | 90.1 |
| MS.gene026390.t1 | MTR_3g035130 | 21.918 | 511 | 308 | 16 | 71 | 572 | 25 | 453 | 3.61e-17 | 85.5 |
| MS.gene026390.t1 | MTR_3g035130 | 21.526 | 511 | 310 | 16 | 71 | 572 | 25 | 453 | 5.05e-17 | 84.7 |
| MS.gene026390.t1 | MTR_4g005750 | 24.224 | 483 | 286 | 16 | 80 | 550 | 54 | 468 | 4.62e-16 | 82.0 |
| MS.gene026390.t1 | MTR_4g013210 | 23.562 | 365 | 215 | 10 | 218 | 566 | 66 | 382 | 6.98e-16 | 80.9 |
| MS.gene026390.t1 | MTR_8g074040 | 23.165 | 436 | 248 | 17 | 133 | 545 | 18 | 389 | 2.41e-15 | 79.7 |
| MS.gene026390.t1 | MTR_3g088880 | 26.371 | 383 | 219 | 12 | 151 | 523 | 128 | 457 | 4.44e-15 | 79.0 |
| MS.gene026390.t1 | MTR_4g128337 | 24.351 | 501 | 266 | 21 | 79 | 550 | 59 | 475 | 4.50e-14 | 75.9 |
| MS.gene026390.t1 | MTR_1g073180 | 34.074 | 135 | 85 | 4 | 412 | 545 | 325 | 456 | 2.62e-11 | 67.0 |
| MS.gene026390.t1 | MTR_1g073180 | 36.283 | 113 | 69 | 3 | 412 | 523 | 347 | 457 | 2.95e-11 | 67.0 |
| MS.gene026390.t1 | MTR_5g023730 | 32.203 | 118 | 69 | 4 | 439 | 552 | 362 | 472 | 4.77e-11 | 66.2 |
| MS.gene026390.t1 | MTR_1569s0010 | 30.270 | 185 | 117 | 6 | 388 | 564 | 298 | 478 | 9.80e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026390.t1 | AT1G49430 | 66.869 | 658 | 212 | 5 | 9 | 663 | 11 | 665 | 0.0 | 944 |
| MS.gene026390.t1 | AT1G64400 | 54.878 | 656 | 293 | 2 | 5 | 659 | 6 | 659 | 0.0 | 798 |
| MS.gene026390.t1 | AT4G23850 | 56.815 | 653 | 278 | 3 | 5 | 656 | 7 | 656 | 0.0 | 791 |
| MS.gene026390.t1 | AT4G11030 | 55.758 | 660 | 288 | 3 | 5 | 663 | 7 | 663 | 0.0 | 775 |
| MS.gene026390.t1 | AT1G49430 | 65.455 | 495 | 166 | 4 | 9 | 501 | 11 | 502 | 0.0 | 697 |
| MS.gene026390.t1 | AT2G47240 | 48.485 | 660 | 334 | 4 | 5 | 662 | 4 | 659 | 0.0 | 648 |
| MS.gene026390.t1 | AT2G47240 | 48.485 | 660 | 334 | 4 | 5 | 662 | 4 | 659 | 0.0 | 648 |
| MS.gene026390.t1 | AT2G47240 | 48.485 | 660 | 334 | 4 | 5 | 662 | 4 | 659 | 0.0 | 648 |
| MS.gene026390.t1 | AT2G47240 | 49.088 | 603 | 302 | 3 | 62 | 662 | 1 | 600 | 0.0 | 602 |
| MS.gene026390.t1 | AT3G05970 | 42.602 | 615 | 335 | 9 | 48 | 657 | 88 | 689 | 1.34e-157 | 471 |
| MS.gene026390.t1 | AT5G27600 | 41.883 | 616 | 338 | 10 | 48 | 657 | 88 | 689 | 4.11e-157 | 469 |
| MS.gene026390.t1 | AT2G04350 | 31.462 | 677 | 376 | 17 | 40 | 655 | 70 | 719 | 1.84e-98 | 318 |
| MS.gene026390.t1 | AT2G04350 | 31.462 | 677 | 376 | 17 | 40 | 655 | 70 | 719 | 1.84e-98 | 318 |
| MS.gene026390.t1 | AT1G77590 | 30.906 | 618 | 362 | 16 | 74 | 655 | 102 | 690 | 1.12e-85 | 283 |
| MS.gene026390.t1 | AT1G77590 | 31.524 | 571 | 326 | 16 | 121 | 655 | 3 | 544 | 4.12e-79 | 262 |
| MS.gene026390.t1 | AT3G23790 | 24.441 | 671 | 412 | 21 | 48 | 656 | 85 | 722 | 3.59e-40 | 157 |
| MS.gene026390.t1 | AT4G14070 | 23.994 | 671 | 412 | 24 | 45 | 655 | 94 | 726 | 1.17e-37 | 150 |
| MS.gene026390.t1 | AT3G21240 | 24.431 | 483 | 291 | 16 | 80 | 552 | 65 | 483 | 2.20e-22 | 102 |
| MS.gene026390.t1 | AT3G21240 | 24.532 | 481 | 289 | 16 | 80 | 550 | 65 | 481 | 2.55e-22 | 101 |
| MS.gene026390.t1 | AT3G21240 | 24.532 | 481 | 289 | 16 | 80 | 550 | 65 | 481 | 2.55e-22 | 101 |
| MS.gene026390.t1 | AT1G51680 | 25.743 | 505 | 285 | 18 | 74 | 557 | 60 | 495 | 4.43e-21 | 98.2 |
| MS.gene026390.t1 | AT1G51680 | 25.743 | 505 | 285 | 18 | 74 | 557 | 60 | 495 | 5.36e-21 | 97.8 |
| MS.gene026390.t1 | AT1G51680 | 25.549 | 501 | 277 | 17 | 74 | 550 | 60 | 488 | 5.95e-21 | 97.1 |
| MS.gene026390.t1 | AT3G16170 | 23.299 | 485 | 287 | 15 | 103 | 569 | 130 | 547 | 1.95e-20 | 96.3 |
| MS.gene026390.t1 | AT4G05160 | 24.641 | 487 | 272 | 21 | 79 | 545 | 55 | 466 | 6.44e-20 | 94.4 |
| MS.gene026390.t1 | AT1G65890 | 24.180 | 488 | 281 | 17 | 79 | 539 | 40 | 465 | 5.96e-18 | 88.2 |
| MS.gene026390.t1 | AT4G19010 | 25.781 | 384 | 225 | 13 | 171 | 545 | 152 | 484 | 1.28e-17 | 87.0 |
| MS.gene026390.t1 | AT2G47245 | 47.368 | 76 | 40 | 0 | 22 | 97 | 53 | 128 | 2.62e-17 | 79.3 |
| MS.gene026390.t1 | AT5G16340 | 22.561 | 492 | 297 | 15 | 80 | 550 | 42 | 470 | 4.98e-17 | 85.1 |
| MS.gene026390.t1 | AT1G66120 | 22.701 | 511 | 300 | 16 | 79 | 565 | 40 | 479 | 5.78e-16 | 82.0 |
| MS.gene026390.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 4.43e-14 | 75.9 |
| MS.gene026390.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 5.29e-14 | 75.9 |
| MS.gene026390.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 5.79e-14 | 75.5 |
| MS.gene026390.t1 | AT1G20500 | 25.974 | 308 | 168 | 12 | 222 | 523 | 198 | 451 | 1.26e-12 | 71.2 |
Find 163 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTCAGATTTGGGTATA+TGG | 0.216286 | 1.1:-19158638 | MS.gene026390:intron |
| AGGGAGCCGCAATAGGATTT+TGG | 0.231454 | 1.1:-19160216 | MS.gene026390:CDS |
| AAAGGCAAGACAATACATTT+TGG | 0.247388 | 1.1:-19158501 | MS.gene026390:CDS |
| TTCTGTTCTTTAGGGAAGTT+TGG | 0.261173 | 1.1:-19160762 | MS.gene026390:intron |
| AAGAAGGAAGCCGAGGAATT+TGG | 0.270880 | 1.1:-19161064 | MS.gene026390:CDS |
| CTTCCAAGCATCTGGTTGTT+GGG | 0.271312 | 1.1:+19162507 | None:intergenic |
| TGTCTGTCAACCTAATAATT+TGG | 0.273590 | 1.1:+19160612 | None:intergenic |
| GGTCTTATGGAGTTGCCTTC+TGG | 0.290118 | 1.1:-19162884 | MS.gene026390:CDS |
| TTGGCACATCCTGCTTCTCC+TGG | 0.291225 | 1.1:-19161045 | MS.gene026390:CDS |
| AGTCCCCTTGGGATTTCTTC+AGG | 0.293756 | 1.1:-19162856 | MS.gene026390:intron |
| ATGAAACTCTCTCAGCTTAG+AGG | 0.297392 | 1.1:-19158354 | MS.gene026390:intron |
| TGTCTATTGACCAAATTATT+AGG | 0.302814 | 1.1:-19160622 | MS.gene026390:CDS |
| GGAGATCACTGTGGCATATA+TGG | 0.312178 | 1.1:-19162103 | MS.gene026390:CDS |
| GCAGCTCAAAGCTATTTATC+TGG | 0.319379 | 1.1:-19158325 | MS.gene026390:CDS |
| ATGATAAACTCCACAGCATT+AGG | 0.321331 | 1.1:+19161441 | None:intergenic |
| GAAATCATTGCAGGCGATAT+TGG | 0.325045 | 1.1:-19158889 | MS.gene026390:intron |
| ACTCAAGAGGTTATAGTTGA+TGG | 0.333385 | 1.1:-19159024 | MS.gene026390:CDS |
| ATTCTTAATAATGACACCTT+TGG | 0.336671 | 1.1:+19160667 | None:intergenic |
| TTATGCCAAAGATGGTCTTA+TGG | 0.345504 | 1.1:-19162897 | MS.gene026390:CDS |
| TTCTTAATAATGACACCTTT+GGG | 0.350658 | 1.1:+19160668 | None:intergenic |
| CAACTCCATAAGACCATCTT+TGG | 0.351332 | 1.1:+19162892 | None:intergenic |
| CCTTCCAAGCATCTGGTTGT+TGG | 0.361935 | 1.1:+19162506 | None:intergenic |
| TTCTTTAGGGAAGTTTGGAT+TGG | 0.369117 | 1.1:-19160757 | MS.gene026390:intron |
| TTCAGGCAGGACCTTATTCA+TGG | 0.376144 | 1.1:-19162335 | MS.gene026390:intron |
| TTCTCATGGCTGATCCCATT+TGG | 0.378749 | 1.1:+19162280 | None:intergenic |
| CTTTATTCTTGCAGGATGTC+AGG | 0.384629 | 1.1:-19160107 | MS.gene026390:intron |
| TCCATTGCAATGATCCATTC+AGG | 0.384998 | 1.1:+19162070 | None:intergenic |
| TCCACATTATCACAAGGATA+TGG | 0.393095 | 1.1:-19159473 | MS.gene026390:intron |
| GTTGTAGCTATTGTGAGCTT+TGG | 0.395332 | 1.1:-19161106 | MS.gene026390:intron |
| GGCAATAGGTCGCCATTATC+TGG | 0.395954 | 1.1:+19160245 | None:intergenic |
| TCCTCAAGAGCCTTTCTGTC+GGG | 0.397134 | 1.1:+19158578 | None:intergenic |
| AAAAGCAAAGTTTCATCTGC+TGG | 0.404565 | 1.1:-19159860 | MS.gene026390:CDS |
| TTCTGGTTTAGAGTCCCCTT+GGG | 0.408562 | 1.1:-19162867 | MS.gene026390:CDS |
| GGCGACCTATTGCCTCTTCA+AGG | 0.410689 | 1.1:-19160236 | MS.gene026390:CDS |
| CTTCTGGTTTAGAGTCCCCT+TGG | 0.410896 | 1.1:-19162868 | MS.gene026390:CDS |
| TCTTTAGGGAAGTTTGGATT+GGG | 0.415694 | 1.1:-19160756 | MS.gene026390:intron |
| ATGTACACAAGTGGAACAAC+TGG | 0.419117 | 1.1:-19160695 | MS.gene026390:CDS |
| CAGAAAGGCTCTTGAGGATT+GGG | 0.422632 | 1.1:-19158573 | MS.gene026390:CDS |
| ATACCAAGGGAATCATATAA+TGG | 0.425203 | 1.1:+19161914 | None:intergenic |
| AGAGGAAATTCCTTGTTCTC+TGG | 0.430679 | 1.1:-19159069 | MS.gene026390:CDS |
| CTCTTCAAGGGAGCCGCAAT+AGG | 0.431801 | 1.1:-19160223 | MS.gene026390:CDS |
| TGATAGACTTGTGTTTGATA+AGG | 0.431832 | 1.1:-19159669 | MS.gene026390:intron |
| TTATGATGTTTCCATCCAAA+TGG | 0.431856 | 1.1:-19162295 | MS.gene026390:CDS |
| CGCGTTCGTATCCTGCTATC+AGG | 0.439526 | 1.1:-19159548 | MS.gene026390:CDS |
| TCATGTATACGACCAGATAA+TGG | 0.442009 | 1.1:-19160257 | MS.gene026390:CDS |
| TTATATGTGAGCCATGAATA+AGG | 0.443315 | 1.1:+19162324 | None:intergenic |
| ACAGAAAGGCTCTTGAGGAT+TGG | 0.443998 | 1.1:-19158574 | MS.gene026390:CDS |
| TTTGACGCCTTCCAAGCATC+TGG | 0.449342 | 1.1:+19162499 | None:intergenic |
| TGGCACATCCTGCTTCTCCT+GGG | 0.450249 | 1.1:-19161044 | MS.gene026390:CDS |
| GGTCTCTTCAATTTAAATGT+TGG | 0.457179 | 1.1:+19158264 | None:intergenic |
| GTTGATGGTTGGTTTCATAC+AGG | 0.465886 | 1.1:-19159009 | MS.gene026390:intron |
| AGCCCCAACAACCAGATGCT+TGG | 0.468239 | 1.1:-19162510 | MS.gene026390:CDS |
| TTGGATGAGCTTAAAAGCAC+TGG | 0.469943 | 1.1:-19158482 | MS.gene026390:CDS |
| TCAAATTGATGAACTATATG+AGG | 0.472343 | 1.1:-19157967 | MS.gene026390:CDS |
| GGTCTTACAGAAAGCTGTGC+TGG | 0.474275 | 1.1:-19159234 | MS.gene026390:CDS |
| TTGGCAGGGATTCTGTTAAG+AGG | 0.476289 | 1.1:-19162533 | MS.gene026390:intron |
| TATGATGTTTCCATCCAAAT+GGG | 0.480057 | 1.1:-19162294 | MS.gene026390:CDS |
| AAACTCTCCCCAGGAGAAGC+AGG | 0.483921 | 1.1:+19161036 | None:intergenic |
| CAACTATAACCTCTTGAGTA+AGG | 0.484832 | 1.1:+19159028 | None:intergenic |
| TGAGTCATTCTTGGTGGCTG+TGG | 0.489343 | 1.1:-19158606 | MS.gene026390:CDS |
| GTTCCATTATATGATTCCCT+TGG | 0.491778 | 1.1:-19161917 | MS.gene026390:intron |
| ATTGATGCCACGGCTTCTCA+TGG | 0.493042 | 1.1:+19162266 | None:intergenic |
| GCTGGGTGTTTCACAGCAAT+CGG | 0.493542 | 1.1:-19159216 | MS.gene026390:CDS |
| CCTGGCCTCGATGGTTGTCA+TGG | 0.495595 | 1.1:+19159158 | None:intergenic |
| AGTTTCAATTGCATTTGTAC+AGG | 0.496334 | 1.1:-19161406 | MS.gene026390:CDS |
| TTCATGGCTCACATATAAAG+AGG | 0.498137 | 1.1:-19162319 | MS.gene026390:CDS |
| AGATCTCTCTCTATGTCAAA+GGG | 0.498603 | 1.1:+19158294 | None:intergenic |
| TACATGAGCAAGTGGAAGAA+AGG | 0.498681 | 1.1:+19160273 | None:intergenic |
| GGAAGGCCTGCTACATCTGA+TGG | 0.500055 | 1.1:-19162953 | MS.gene026390:CDS |
| CATGGCTGATCCCATTTGGA+TGG | 0.504816 | 1.1:+19162284 | None:intergenic |
| TTGTAGTATTTCAGTAATTG+TGG | 0.505813 | 1.1:+19158243 | None:intergenic |
| ATTGGAGAATGGCAACCAAA+TGG | 0.506109 | 1.1:-19158871 | MS.gene026390:CDS |
| ATCTTTATGTGAAAATCTAA+AGG | 0.508165 | 1.1:-19158519 | MS.gene026390:CDS |
| GTCTTACAGAAAGCTGTGCT+GGG | 0.510198 | 1.1:-19159233 | MS.gene026390:CDS |
| AGTGCGTCATATCCCATCTC+TGG | 0.511034 | 1.1:+19159123 | None:intergenic |
| CTCTCTATGTCAAAGGGAGT+TGG | 0.511421 | 1.1:+19158300 | None:intergenic |
| TGTTTCTGCCACACAAAAGA+AGG | 0.513138 | 1.1:-19161080 | MS.gene026390:CDS |
| GAACTATATGAGGAAGCAAA+AGG | 0.513195 | 1.1:-19157957 | MS.gene026390:CDS |
| CTGGGGAGAGTTTCTCCAGT+TGG | 0.516499 | 1.1:-19161026 | MS.gene026390:intron |
| AAACACTCCTCCACATGTAC+AGG | 0.517559 | 1.1:+19159512 | None:intergenic |
| TTGGTAGACTAAACAAGCGT+TGG | 0.517913 | 1.1:-19159576 | MS.gene026390:intron |
| AGATTCAAGCCTGGCCTCGA+TGG | 0.521799 | 1.1:+19159149 | None:intergenic |
| GCTTGAATCTGTACCAGAGA+TGG | 0.522837 | 1.1:-19159136 | MS.gene026390:CDS |
| AAGGTGCAGCTCCTGATAGC+AGG | 0.523219 | 1.1:+19159537 | None:intergenic |
| TGGTAGACTAAACAAGCGTT+GGG | 0.523491 | 1.1:-19159575 | MS.gene026390:intron |
| CTAATACGATCGAAAACTCT+AGG | 0.525017 | 1.1:+19160033 | None:intergenic |
| TTCCAAGCATCTGGTTGTTG+GGG | 0.526086 | 1.1:+19162508 | None:intergenic |
| AACACAAGTCTATCAAAGAA+AGG | 0.528426 | 1.1:+19159677 | None:intergenic |
| CCATGACAACCATCGAGGCC+AGG | 0.528881 | 1.1:-19159158 | MS.gene026390:CDS |
| AACTCACGGGATTGATGCCA+CGG | 0.531660 | 1.1:+19162256 | None:intergenic |
| GGCACATCCTGCTTCTCCTG+GGG | 0.532121 | 1.1:-19161043 | MS.gene026390:CDS |
| TAGATCTCTCTCTATGTCAA+AGG | 0.533185 | 1.1:+19158293 | None:intergenic |
| AGAACAAGGAATTTCCTCTC+AGG | 0.534613 | 1.1:+19159073 | None:intergenic |
| CTCTGGTACAGATTCAAGCC+TGG | 0.534664 | 1.1:+19159140 | None:intergenic |
| GCATAAATGCATCTATAGAC+AGG | 0.535542 | 1.1:+19162914 | None:intergenic |
| AAGCATACCGATGATATAAG+AGG | 0.536051 | 1.1:+19158751 | None:intergenic |
| AGATGCATTTATGCCAAAGA+TGG | 0.539890 | 1.1:-19162905 | MS.gene026390:CDS |
| TGCACCTTTGCCTGTACATG+TGG | 0.540535 | 1.1:-19159522 | MS.gene026390:CDS |
| CCAACAACCAGATGCTTGGA+AGG | 0.540812 | 1.1:-19162506 | MS.gene026390:CDS |
| AAGAGGTTATAGTTGATGGT+TGG | 0.543539 | 1.1:-19159020 | MS.gene026390:CDS |
| GCAATGCCCTCTTATATCAT+CGG | 0.544084 | 1.1:-19158758 | MS.gene026390:intron |
| ACCATATCCTTGTGATAATG+TGG | 0.544732 | 1.1:+19159472 | None:intergenic |
| AAAGGTGCTGCTTTGTGTTG+TGG | 0.547465 | 1.1:+19159695 | None:intergenic |
| GGCCTTCCATCAGATGTAGC+AGG | 0.548577 | 1.1:+19162947 | None:intergenic |
| CTGTGAAAGTTGAGGAAGGA+AGG | 0.550847 | 1.1:-19162970 | MS.gene026390:CDS |
| AATATCTTTAAATTATCTCA+AGG | 0.551439 | 1.1:-19158820 | MS.gene026390:CDS |
| ATGGTGCCAACTGTCCTGAA+TGG | 0.551719 | 1.1:-19162084 | MS.gene026390:CDS |
| GGCTCCCTTGAAGAGGCAAT+AGG | 0.551797 | 1.1:+19160231 | None:intergenic |
| AAAGCAAAGTTTCATCTGCT+GGG | 0.552825 | 1.1:-19159859 | MS.gene026390:CDS |
| AATGATCCATTCAGGACAGT+TGG | 0.553413 | 1.1:+19162078 | None:intergenic |
| CTTGAATCTGTACCAGAGAT+GGG | 0.556327 | 1.1:-19159135 | MS.gene026390:CDS |
| TAAGTTAAGATATCTAGAGA+AGG | 0.556789 | 1.1:-19159723 | MS.gene026390:CDS |
| TTTCAGTTTCATAATGTCAG+AGG | 0.559921 | 1.1:-19162999 | None:intergenic |
| ATCCTCAAGAGCCTTTCTGT+CGG | 0.564145 | 1.1:+19158577 | None:intergenic |
| GCAGGATGTGCCAAATTCCT+CGG | 0.568065 | 1.1:+19161054 | None:intergenic |
| CCCCGACAGAAAGGCTCTTG+AGG | 0.568269 | 1.1:-19158579 | MS.gene026390:CDS |
| CCTCAAGAGCCTTTCTGTCG+GGG | 0.569393 | 1.1:+19158579 | None:intergenic |
| TGTGGTAGTCCCCGACAGAA+AGG | 0.569904 | 1.1:-19158588 | MS.gene026390:CDS |
| TATACTGTGAAAGTTGAGGA+AGG | 0.570953 | 1.1:-19162974 | MS.gene026390:CDS |
| TGCACAATAATGTACACAAG+TGG | 0.574901 | 1.1:-19160704 | MS.gene026390:CDS |
| AGCATACCGATGATATAAGA+GGG | 0.579755 | 1.1:+19158752 | None:intergenic |
| GTGTCTGAACATCTTCAAGC+AGG | 0.580383 | 1.1:+19160082 | None:intergenic |
| TTGTGATAATGTGGATCCAC+TGG | 0.582315 | 1.1:+19159481 | None:intergenic |
| TTGCAGGCGATATTGGAGAA+TGG | 0.585107 | 1.1:-19158882 | MS.gene026390:intron |
| CTGGCCTCGATGGTTGTCAT+GGG | 0.586370 | 1.1:+19159159 | None:intergenic |
| GCGACCTATTGCCTCTTCAA+GGG | 0.591176 | 1.1:-19160235 | MS.gene026390:CDS |
| GGTTTATACTGTGAAAGTTG+AGG | 0.592335 | 1.1:-19162978 | MS.gene026390:CDS |
| AAGTTAAGATATCTAGAGAA+GGG | 0.592630 | 1.1:-19159722 | MS.gene026390:CDS |
| TATTAGGTTGACAGACAAAG+TGG | 0.595571 | 1.1:-19160606 | MS.gene026390:intron |
| GCGACAAGACCTTACTCAAG+AGG | 0.596877 | 1.1:-19159037 | MS.gene026390:CDS |
| TCCTGAATGGATCATTGCAA+TGG | 0.598033 | 1.1:-19162071 | MS.gene026390:CDS |
| TCCTCCACATGTACAGGCAA+AGG | 0.600701 | 1.1:+19159518 | None:intergenic |
| ACCTTTGCCTGTACATGTGG+AGG | 0.605384 | 1.1:-19159519 | MS.gene026390:CDS |
| TGAGGAAGCAAAAGGAACAA+AGG | 0.608554 | 1.1:-19157949 | MS.gene026390:CDS |
| CGTGGAGAAATTTGCCTGAG+AGG | 0.612494 | 1.1:-19159087 | MS.gene026390:CDS |
| GGCCTGCTACATCTGATGGA+AGG | 0.614561 | 1.1:-19162949 | MS.gene026390:CDS |
| ATTGACCTGAAGAAATCCCA+AGG | 0.616044 | 1.1:+19162851 | None:intergenic |
| CTATTGCGGCTCCCTTGAAG+AGG | 0.618961 | 1.1:+19160224 | None:intergenic |
| CTATAGACAGGACCTACTGA+TGG | 0.620712 | 1.1:+19162926 | None:intergenic |
| CCTAACAGGTCCTAATGCTG+TGG | 0.621303 | 1.1:-19161451 | MS.gene026390:intron |
| GCCTTGCCAAAATCCTATTG+CGG | 0.621543 | 1.1:+19160210 | None:intergenic |
| TGGTCGTATACATGAGCAAG+TGG | 0.625974 | 1.1:+19160265 | None:intergenic |
| ATGCAATTGAAACTTCAGCA+TGG | 0.627938 | 1.1:+19161415 | None:intergenic |
| GGATCAGCCATGAGAAGCCG+TGG | 0.629504 | 1.1:-19162273 | MS.gene026390:CDS |
| CTTGTGATAACCAGAGAACA+AGG | 0.630070 | 1.1:+19159059 | None:intergenic |
| CAAGGGGACTCTAAACCAGA+AGG | 0.631617 | 1.1:+19162869 | None:intergenic |
| GTACATTATTGTGCAAATGT+CGG | 0.632622 | 1.1:+19160712 | None:intergenic |
| CAACTGGAGAAACTCTCCCC+AGG | 0.632932 | 1.1:+19161027 | None:intergenic |
| ACAATTACTGAAATACTACA+AGG | 0.640007 | 1.1:-19158241 | MS.gene026390:intron |
| GGAACACCACAAAATATAGT+CGG | 0.646136 | 1.1:+19160054 | None:intergenic |
| TTGACCTGAAGAAATCCCAA+GGG | 0.647515 | 1.1:+19162852 | None:intergenic |
| TGAATGGATCATTGCAATGG+AGG | 0.648367 | 1.1:-19162068 | MS.gene026390:intron |
| TCTGATGGAAGGCCATCAGT+AGG | 0.651682 | 1.1:-19162938 | MS.gene026390:CDS |
| TAGACTAAACAAGCGTTGGG+TGG | 0.653492 | 1.1:-19159572 | MS.gene026390:CDS |
| CACACAAAAGAAGGAAGCCG+AGG | 0.662656 | 1.1:-19161071 | MS.gene026390:CDS |
| CTCAGGCAAATTTCTCCACG+CGG | 0.693138 | 1.1:+19159090 | None:intergenic |
| GAGTGTTTGAGAGTCACCAG+TGG | 0.701923 | 1.1:-19159497 | MS.gene026390:CDS |
| GGAACAACTGGAGAACCCAA+AGG | 0.705395 | 1.1:-19160683 | MS.gene026390:CDS |
| AGTGGATCCACATTATCACA+AGG | 0.714395 | 1.1:-19159479 | MS.gene026390:CDS |
| AATTCCCATGACAACCATCG+AGG | 0.735979 | 1.1:-19159163 | MS.gene026390:CDS |
| TGTTACTAGGGAGATCACTG+TGG | 0.745755 | 1.1:-19162112 | MS.gene026390:intron |
| TGACCTGAAGAAATCCCAAG+GGG | 0.758321 | 1.1:+19162853 | None:intergenic |
| GCACTTTCTAGTGAGCCGCG+TGG | 0.777176 | 1.1:-19159105 | MS.gene026390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATATAAAAATTAA+TGG | + | chr1.1:19161624-19161643 | None:intergenic | 0.0% |
| !! | ATAAAAATTAATGGAAAAAT+TGG | + | chr1.1:19161615-19161634 | None:intergenic | 10.0% |
| !! | TAATTGTAACTAAAAAATAT+TGG | - | chr1.1:19161326-19161345 | MS.gene026390:intron | 10.0% |
| !! | AATATCTTTAAATTATCTCA+AGG | - | chr1.1:19162110-19162129 | MS.gene026390:intron | 15.0% |
| !! | GAAATTTATTATCTGATTAA+TGG | - | chr1.1:19158790-19158809 | MS.gene026390:CDS | 15.0% |
| !! | TTAGTTTCTAATAAGTTTAT+AGG | - | chr1.1:19160427-19160446 | MS.gene026390:intron | 15.0% |
| !!! | TACAACATTGTAATATTTTT+AGG | - | chr1.1:19160604-19160623 | MS.gene026390:intron | 15.0% |
| !!! | TATTATTATTATTTTGTGAC+AGG | - | chr1.1:19161675-19161694 | MS.gene026390:intron | 15.0% |
| !!! | TTTTATCTTAGAAGTTTTTA+TGG | - | chr1.1:19158368-19158387 | MS.gene026390:intron | 15.0% |
| !! | AAAATTAATGGAAAAATTGG+TGG | + | chr1.1:19161612-19161631 | None:intergenic | 20.0% |
| !! | AAACTACAACAAAGAATAAA+CGG | + | chr1.1:19158502-19158521 | None:intergenic | 20.0% |
| !! | ACATGTATAATAGTAGTATT+TGG | - | chr1.1:19158335-19158354 | MS.gene026390:CDS | 20.0% |
| !! | ATATCTTAACTTACTGTTAA+TGG | + | chr1.1:19161200-19161219 | None:intergenic | 20.0% |
| !! | ATCTTTATGTGAAAATCTAA+AGG | - | chr1.1:19162411-19162430 | MS.gene026390:intron | 20.0% |
| !! | ATGAATCTATCAAAAAGATA+AGG | + | chr1.1:19158311-19158330 | None:intergenic | 20.0% |
| !! | CAAAATAGTAAAATTGAATC+AGG | + | chr1.1:19158963-19158982 | None:intergenic | 20.0% |
| !! | CAAAATCATATATACATACT+TGG | + | chr1.1:19162483-19162502 | None:intergenic | 20.0% |
| !! | CAAACAAATAAACCTTAATA+TGG | + | chr1.1:19159766-19159785 | None:intergenic | 20.0% |
| !! | TAAAGATTTCACAATTTAAC+AGG | + | chr1.1:19158554-19158573 | None:intergenic | 20.0% |
| !! | TACTGAAAAATTGAATGAAT+TGG | + | chr1.1:19160406-19160425 | None:intergenic | 20.0% |
| !! | TATAGTAGAATTTCACAATT+TGG | - | chr1.1:19162834-19162853 | MS.gene026390:intron | 20.0% |
| !! | TGATTATACATTAACCATAA+AGG | + | chr1.1:19160471-19160490 | None:intergenic | 20.0% |
| !!! | ACAATTTTCTTTAAACTTCA+AGG | - | chr1.1:19160354-19160373 | MS.gene026390:intron | 20.0% |
| !!! | ATTAATGGTTTTATGTTACT+AGG | - | chr1.1:19158805-19158824 | MS.gene026390:CDS | 20.0% |
| !!! | ATTCAATTTTACTATTTTGC+AGG | - | chr1.1:19158964-19158983 | MS.gene026390:intron | 20.0% |
| !!! | CCACAATATAAAAAATTTTG+AGG | + | chr1.1:19160030-19160049 | None:intergenic | 20.0% |
| !!! | CCTCAAAATTTTTTATATTG+TGG | - | chr1.1:19160027-19160046 | MS.gene026390:intron | 20.0% |
| !!! | CTAAAAAATATTGGTTTTGT+TGG | - | chr1.1:19161335-19161354 | MS.gene026390:intron | 20.0% |
| !!! | GGATAAAACTATTTTTCATA+AGG | + | chr1.1:19161579-19161598 | None:intergenic | 20.0% |
| !!! | TTAATGGTTTTATGTTACTA+GGG | - | chr1.1:19158806-19158825 | MS.gene026390:CDS | 20.0% |
| !!! | TTTATAGTATAAAGTGCTAT+AGG | + | chr1.1:19162761-19162780 | None:intergenic | 20.0% |
| ! | AAACAAATGTTTGTTCAGTA+AGG | + | chr1.1:19159662-19159681 | None:intergenic | 25.0% |
| ! | AACAAATGTTTGTTCAGTAA+GGG | + | chr1.1:19159661-19159680 | None:intergenic | 25.0% |
| ! | AAGTTAAGATATCTAGAGAA+GGG | - | chr1.1:19161208-19161227 | MS.gene026390:intron | 25.0% |
| ! | AATATTCTCTTTATTCTTGC+AGG | - | chr1.1:19160815-19160834 | MS.gene026390:intron | 25.0% |
| ! | ACAATTACTGAAATACTACA+AGG | - | chr1.1:19162689-19162708 | MS.gene026390:intron | 25.0% |
| ! | ACTATAATCCAAGTTAGTTA+AGG | + | chr1.1:19162820-19162839 | None:intergenic | 25.0% |
| ! | AGAAATCACATTATCTTGTT+TGG | + | chr1.1:19159378-19159397 | None:intergenic | 25.0% |
| ! | AGTTTGTCAACATTAAATAG+AGG | + | chr1.1:19159791-19159810 | None:intergenic | 25.0% |
| ! | ATTCTTAATAATGACACCTT+TGG | + | chr1.1:19160266-19160285 | None:intergenic | 25.0% |
| ! | CTATATAGTTTCACAAGTAT+AGG | + | chr1.1:19160569-19160588 | None:intergenic | 25.0% |
| ! | GGAAATTAAATTTCACTCAT+TGG | + | chr1.1:19160548-19160567 | None:intergenic | 25.0% |
| ! | GTTCTTCAAATCTAAAAAGT+AGG | - | chr1.1:19159710-19159729 | MS.gene026390:CDS | 25.0% |
| ! | TAAGTTAAGATATCTAGAGA+AGG | - | chr1.1:19161207-19161226 | MS.gene026390:intron | 25.0% |
| ! | TATAGAATGAGAAACCTTTA+TGG | - | chr1.1:19160454-19160473 | MS.gene026390:intron | 25.0% |
| ! | TATGAACTCTAATCAGATAT+TGG | - | chr1.1:19162886-19162905 | MS.gene026390:CDS | 25.0% |
| ! | TCAAATTGATGAACTATATG+AGG | - | chr1.1:19162963-19162982 | MS.gene026390:CDS | 25.0% |
| ! | TGAGACAACTTGAATAATAT+AGG | + | chr1.1:19161986-19162005 | None:intergenic | 25.0% |
| ! | TGTCTATTGACCAAATTATT+AGG | - | chr1.1:19160308-19160327 | MS.gene026390:intron | 25.0% |
| ! | TTCTTAATAATGACACCTTT+GGG | + | chr1.1:19160265-19160284 | None:intergenic | 25.0% |
| ! | TTCTTTGTGTATTCAGATTT+GGG | - | chr1.1:19162285-19162304 | MS.gene026390:CDS | 25.0% |
| ! | TTGTAGTATTTCAGTAATTG+TGG | + | chr1.1:19162690-19162709 | None:intergenic | 25.0% |
| ! | TTTCTTTGTGTATTCAGATT+TGG | - | chr1.1:19162284-19162303 | MS.gene026390:CDS | 25.0% |
| ! | TTTGGACGAATAAAATTCTA+TGG | - | chr1.1:19159256-19159275 | MS.gene026390:intron | 25.0% |
| !! | ACTATATGCTTTTCAAATGT+AGG | - | chr1.1:19161043-19161062 | MS.gene026390:CDS | 25.0% |
| !! | ACTTTATCAAAGTTTTCTGA+AGG | - | chr1.1:19161537-19161556 | MS.gene026390:intron | 25.0% |
| !! | TGTTTTCTTAATGTTCCATA+AGG | - | chr1.1:19159168-19159187 | MS.gene026390:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1.1:19159070-19159089 | None:intergenic | 25.0% |
| !! | TTTTCTGTCAATGATTTTCA+TGG | + | chr1.1:19162087-19162106 | None:intergenic | 25.0% |
| !!! | AAAATTGGTGGAAGTTTTAT+TGG | + | chr1.1:19161600-19161619 | None:intergenic | 25.0% |
| !!! | TAACATTTTGAAATCATTGC+AGG | - | chr1.1:19162032-19162051 | MS.gene026390:intron | 25.0% |
| !!! | TATTATTCAAGTTGTCTCAT+TGG | - | chr1.1:19161987-19162006 | MS.gene026390:intron | 25.0% |
| AAAGAACAAGAACATACTGA+TGG | + | chr1.1:19159561-19159580 | None:intergenic | 30.0% | |
| AACACAAGTCTATCAAAGAA+AGG | + | chr1.1:19161256-19161275 | None:intergenic | 30.0% | |
| AAGACAAAAAAGACATACCA+AGG | + | chr1.1:19159033-19159052 | None:intergenic | 30.0% | |
| ACAGCAAATCTTTATATTGC+GGG | - | chr1.1:19159962-19159981 | MS.gene026390:intron | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | + | chr1.1:19159351-19159370 | None:intergenic | 30.0% | |
| AGACAAAAAAGACATACCAA+GGG | + | chr1.1:19159032-19159051 | None:intergenic | 30.0% | |
| AGTCATAGTGTATTAGATTG+CGG | - | chr1.1:19159929-19159948 | MS.gene026390:intron | 30.0% | |
| AGTTTCAATTGCATTTGTAC+AGG | - | chr1.1:19159524-19159543 | MS.gene026390:CDS | 30.0% | |
| ATACCAAGGGAATCATATAA+TGG | + | chr1.1:19159019-19159038 | None:intergenic | 30.0% | |
| ATGTGTATAACAGTGGTATT+TGG | + | chr1.1:19159234-19159253 | None:intergenic | 30.0% | |
| ATTATCACAAGGATATGGTA+TGG | - | chr1.1:19161462-19161481 | MS.gene026390:intron | 30.0% | |
| CACAGCAAATCTTTATATTG+CGG | - | chr1.1:19159961-19159980 | MS.gene026390:intron | 30.0% | |
| CCAAATTATGTGTATAACAG+TGG | + | chr1.1:19159241-19159260 | None:intergenic | 30.0% | |
| CCACTGTTATACACATAATT+TGG | - | chr1.1:19159238-19159257 | MS.gene026390:intron | 30.0% | |
| CTATCAAAACTTAGCAGAAT+AGG | + | chr1.1:19162516-19162535 | None:intergenic | 30.0% | |
| CTTATTTGAGCTTATCTACT+GGG | + | chr1.1:19159350-19159369 | None:intergenic | 30.0% | |
| GGTCTCTTCAATTTAAATGT+TGG | + | chr1.1:19162669-19162688 | None:intergenic | 30.0% | |
| GTACATTATTGTGCAAATGT+CGG | + | chr1.1:19160221-19160240 | None:intergenic | 30.0% | |
| GTTTCGTTAATGTTTCCTTA+TGG | + | chr1.1:19159186-19159205 | None:intergenic | 30.0% | |
| TATGATGTTTCCATCCAAAT+GGG | - | chr1.1:19158636-19158655 | MS.gene026390:intron | 30.0% | |
| TGATAGACTTGTGTTTGATA+AGG | - | chr1.1:19161261-19161280 | MS.gene026390:intron | 30.0% | |
| TGATTTATTCCTAGCAATTG+AGG | - | chr1.1:19161949-19161968 | MS.gene026390:intron | 30.0% | |
| TGTATTCAGATTTGGGTATA+TGG | - | chr1.1:19162292-19162311 | MS.gene026390:CDS | 30.0% | |
| TGTCTGTCAACCTAATAATT+TGG | + | chr1.1:19160321-19160340 | None:intergenic | 30.0% | |
| TTATATGTGAGCCATGAATA+AGG | + | chr1.1:19158609-19158628 | None:intergenic | 30.0% | |
| TTATGATGTTTCCATCCAAA+TGG | - | chr1.1:19158635-19158654 | MS.gene026390:intron | 30.0% | |
| TTCCTATCGGTATTCAAATT+AGG | - | chr1.1:19160092-19160111 | MS.gene026390:CDS | 30.0% | |
| TTGTTCAGTAAGGGAAAAAA+TGG | + | chr1.1:19159652-19159671 | None:intergenic | 30.0% | |
| TTTACTCACAGTCCATATTA+AGG | - | chr1.1:19159751-19159770 | MS.gene026390:intron | 30.0% | |
| ! | AAAGGCAAGACAATACATTT+TGG | - | chr1.1:19162429-19162448 | MS.gene026390:intron | 30.0% |
| ! | AACATTGAGCTTGAATTTTC+AGG | - | chr1.1:19158578-19158597 | MS.gene026390:CDS | 30.0% |
| ! | AGCAAAAAAGTACATGTAAC+TGG | - | chr1.1:19158743-19158762 | MS.gene026390:intron | 30.0% |
| ! | CCTTTCTTTTCTGTTCTTTA+GGG | - | chr1.1:19160160-19160179 | MS.gene026390:intron | 30.0% |
| ! | GAAGTTTTTATGGTTTCCTT+TGG | - | chr1.1:19158378-19158397 | MS.gene026390:intron | 30.0% |
| ! | TCCTTTCTTTTCTGTTCTTT+AGG | - | chr1.1:19160159-19160178 | MS.gene026390:intron | 30.0% |
| ! | TCTTGTTTCCTTAACTAACT+TGG | - | chr1.1:19162809-19162828 | MS.gene026390:intron | 30.0% |
| ! | TGAACTCTTTTCACAAAGTT+TGG | - | chr1.1:19161301-19161320 | MS.gene026390:intron | 30.0% |
| !! | AACTTACTGTTAATGGATTC+TGG | + | chr1.1:19161193-19161212 | None:intergenic | 30.0% |
| !! | ATAAAGATTTGCTGTGTAAC+CGG | + | chr1.1:19159957-19159976 | None:intergenic | 30.0% |
| !!! | AAACAGTTTTGAGTCATTCT+TGG | - | chr1.1:19162315-19162334 | MS.gene026390:CDS | 30.0% |
| AAAAGCAAAGTTTCATCTGC+TGG | - | chr1.1:19161070-19161089 | MS.gene026390:CDS | 35.0% | |
| AAACAGAAATCCACTTACCT+TGG | - | chr1.1:19162238-19162257 | MS.gene026390:intron | 35.0% | |
| AAAGCAAAGTTTCATCTGCT+GGG | - | chr1.1:19161071-19161090 | MS.gene026390:CDS | 35.0% | |
| AACTTGTGTTTATGCCTAAC+AGG | - | chr1.1:19159465-19159484 | MS.gene026390:intron | 35.0% | |
| AAGCATACCGATGATATAAG+AGG | + | chr1.1:19162182-19162201 | None:intergenic | 35.0% | |
| ACTCAAGAGGTTATAGTTGA+TGG | - | chr1.1:19161906-19161925 | MS.gene026390:intron | 35.0% | |
| AGATAAGGACTCATAGAACA+TGG | + | chr1.1:19158296-19158315 | None:intergenic | 35.0% | |
| AGATCTCTCTCTATGTCAAA+GGG | + | chr1.1:19162639-19162658 | None:intergenic | 35.0% | |
| AGATGCATTTATGCCAAAGA+TGG | - | chr1.1:19158025-19158044 | MS.gene026390:intron | 35.0% | |
| AGCATACCGATGATATAAGA+GGG | + | chr1.1:19162181-19162200 | None:intergenic | 35.0% | |
| ATACACTATGACTTACCAAC+TGG | + | chr1.1:19159922-19159941 | None:intergenic | 35.0% | |
| ATCAACTATTGAAGCAACCA+AGG | + | chr1.1:19162258-19162277 | None:intergenic | 35.0% | |
| ATGATAAACTCCACAGCATT+AGG | + | chr1.1:19159492-19159511 | None:intergenic | 35.0% | |
| ATGCAATTGAAACTTCAGCA+TGG | + | chr1.1:19159518-19159537 | None:intergenic | 35.0% | |
| CAACTATAACCTCTTGAGTA+AGG | + | chr1.1:19161905-19161924 | None:intergenic | 35.0% | |
| CCCTAAAGAACAGAAAAGAA+AGG | + | chr1.1:19160163-19160182 | None:intergenic | 35.0% | |
| CTAATACGATCGAAAACTCT+AGG | + | chr1.1:19160900-19160919 | None:intergenic | 35.0% | |
| CTCCTAATTTGAATACCGAT+AGG | + | chr1.1:19160097-19160116 | None:intergenic | 35.0% | |
| GAACTATATGAGGAAGCAAA+AGG | - | chr1.1:19162973-19162992 | MS.gene026390:CDS | 35.0% | |
| GCATAAATGCATCTATAGAC+AGG | + | chr1.1:19158019-19158038 | None:intergenic | 35.0% | |
| GGAACACCACAAAATATAGT+CGG | + | chr1.1:19160879-19160898 | None:intergenic | 35.0% | |
| GGTTTATACTGTGAAAGTTG+AGG | - | chr1.1:19157952-19157971 | MS.gene026390:CDS | 35.0% | |
| GTTCCATTATATGATTCCCT+TGG | - | chr1.1:19159013-19159032 | MS.gene026390:CDS | 35.0% | |
| TAGATCTCTCTCTATGTCAA+AGG | + | chr1.1:19162640-19162659 | None:intergenic | 35.0% | |
| TATACTGTGAAAGTTGAGGA+AGG | - | chr1.1:19157956-19157975 | MS.gene026390:CDS | 35.0% | |
| TCAAGACATGACAAAATCTG+TGG | + | chr1.1:19159685-19159704 | None:intergenic | 35.0% | |
| TCATGTATACGACCAGATAA+TGG | - | chr1.1:19160673-19160692 | MS.gene026390:CDS | 35.0% | |
| TCCACATTATCACAAGGATA+TGG | - | chr1.1:19161457-19161476 | MS.gene026390:intron | 35.0% | |
| TGCACAATAATGTACACAAG+TGG | - | chr1.1:19160226-19160245 | MS.gene026390:CDS | 35.0% | |
| TGCATGACTTTATCACAACA+TGG | - | chr1.1:19158208-19158227 | MS.gene026390:intron | 35.0% | |
| TTATATTGTGGCCACAATTG+CGG | - | chr1.1:19160039-19160058 | MS.gene026390:CDS | 35.0% | |
| TTCATGGCTCACATATAAAG+AGG | - | chr1.1:19158611-19158630 | MS.gene026390:CDS | 35.0% | |
| ! | ACAGTTGATTTAGCCATGTT+TGG | - | chr1.1:19159054-19159073 | MS.gene026390:CDS | 35.0% |
| ! | ACCATATCCTTGTGATAATG+TGG | + | chr1.1:19161461-19161480 | None:intergenic | 35.0% |
| ! | ATGATTTTCATGGCTCCATT+TGG | + | chr1.1:19162077-19162096 | None:intergenic | 35.0% |
| ! | CTGAAACCGACTATATTTTG+TGG | - | chr1.1:19160870-19160889 | MS.gene026390:intron | 35.0% |
| ! | GCAGTTGAGCACAATTTTAA+TGG | - | chr1.1:19162379-19162398 | MS.gene026390:intron | 35.0% |
| ! | TCTTTAGGGAAGTTTGGATT+GGG | - | chr1.1:19160174-19160193 | MS.gene026390:intron | 35.0% |
| ! | TTATGCCAAAGATGGTCTTA+TGG | - | chr1.1:19158033-19158052 | MS.gene026390:intron | 35.0% |
| ! | TTCTGTTCTTTAGGGAAGTT+TGG | - | chr1.1:19160168-19160187 | MS.gene026390:intron | 35.0% |
| ! | TTCTTTAGGGAAGTTTGGAT+TGG | - | chr1.1:19160173-19160192 | MS.gene026390:intron | 35.0% |
| ! | TTTTATGGTTTCCTTTGGCA+GGG | - | chr1.1:19158383-19158402 | MS.gene026390:intron | 35.0% |
| ! | TTTTTATGGTTTCCTTTGGC+AGG | - | chr1.1:19158382-19158401 | MS.gene026390:intron | 35.0% |
| !! | AAGAGGTTATAGTTGATGGT+TGG | - | chr1.1:19161910-19161929 | MS.gene026390:intron | 35.0% |
| !! | TATTAGGTTGACAGACAAAG+TGG | - | chr1.1:19160324-19160343 | MS.gene026390:intron | 35.0% |
| !! | TGTGTTTTCTATGATGGGAA+CGG | - | chr1.1:19161740-19161759 | MS.gene026390:intron | 35.0% |
| !!! | CAAATGTCGGTCTTCTTTTT+TGG | + | chr1.1:19160208-19160227 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTCATCTTCCTAT+CGG | - | chr1.1:19160079-19160098 | MS.gene026390:CDS | 35.0% |
| AATGATCCATTCAGGACAGT+TGG | + | chr1.1:19158855-19158874 | None:intergenic | 40.0% | |
| AGAACAAGGAATTTCCTCTC+AGG | + | chr1.1:19161860-19161879 | None:intergenic | 40.0% | |
| AGAGAGAATGTTGAAAGAGC+AGG | + | chr1.1:19158710-19158729 | None:intergenic | 40.0% | |
| AGAGGAAATTCCTTGTTCTC+TGG | - | chr1.1:19161861-19161880 | MS.gene026390:intron | 40.0% | |
| AGGAAATGCTGAAAACTCAC+GGG | + | chr1.1:19158690-19158709 | None:intergenic | 40.0% | |
| AGTGGATCCACATTATCACA+AGG | - | chr1.1:19161451-19161470 | MS.gene026390:intron | 40.0% | |
| AGTGTATTAGATTGCGGTTC+CGG | - | chr1.1:19159935-19159954 | MS.gene026390:intron | 40.0% | |
| ATGAAACTCTCTCAGCTTAG+AGG | - | chr1.1:19162576-19162595 | MS.gene026390:intron | 40.0% | |
| ATGTACACAAGTGGAACAAC+TGG | - | chr1.1:19160235-19160254 | MS.gene026390:CDS | 40.0% | |
| ATTGAAGCAACCAAGGTAAG+TGG | + | chr1.1:19162251-19162270 | None:intergenic | 40.0% | |
| ATTGACCTGAAGAAATCCCA+AGG | + | chr1.1:19158082-19158101 | None:intergenic | 40.0% | |
| ATTGGAGAATGGCAACCAAA+TGG | - | chr1.1:19162059-19162078 | MS.gene026390:intron | 40.0% | |
| CAACTCCATAAGACCATCTT+TGG | + | chr1.1:19158041-19158060 | None:intergenic | 40.0% | |
| CACAACATGGCTCAATCAAT+TGG | - | chr1.1:19158221-19158240 | MS.gene026390:intron | 40.0% | |
| CAGGAAATGCTGAAAACTCA+CGG | + | chr1.1:19158691-19158710 | None:intergenic | 40.0% | |
| CCGATAGGAAGATGAAAACA+AGG | + | chr1.1:19160082-19160101 | None:intergenic | 40.0% | |
| CGGTATTCAAATTAGGAGCA+TGG | - | chr1.1:19160099-19160118 | MS.gene026390:intron | 40.0% | |
| CTTGAATCTGTACCAGAGAT+GGG | - | chr1.1:19161795-19161814 | MS.gene026390:intron | 40.0% | |
| CTTGTGATAACCAGAGAACA+AGG | + | chr1.1:19161874-19161893 | None:intergenic | 40.0% | |
| CTTTATTCTTGCAGGATGTC+AGG | - | chr1.1:19160823-19160842 | MS.gene026390:intron | 40.0% | |
| CTTTGCGAAAATTGCTTTGC+AGG | - | chr1.1:19162939-19162958 | MS.gene026390:CDS | 40.0% | |
| GAAATCATTGCAGGCGATAT+TGG | - | chr1.1:19162041-19162060 | MS.gene026390:intron | 40.0% | |
| GCAATGCCCTCTTATATCAT+CGG | - | chr1.1:19162172-19162191 | MS.gene026390:intron | 40.0% | |
| GCAGCTCAAAGCTATTTATC+TGG | - | chr1.1:19162605-19162624 | MS.gene026390:intron | 40.0% | |
| GCGTCAAAAACTCGATTCTA+AGG | - | chr1.1:19158446-19158465 | MS.gene026390:intron | 40.0% | |
| GTTGTAGCTATTGTGAGCTT+TGG | - | chr1.1:19159824-19159843 | MS.gene026390:CDS | 40.0% | |
| TAAGTGCAATTTCGACCACA+TGG | + | chr1.1:19159997-19160016 | None:intergenic | 40.0% | |
| TACATGAGCAAGTGGAAGAA+AGG | + | chr1.1:19160660-19160679 | None:intergenic | 40.0% | |
| TCCATTGCAATGATCCATTC+AGG | + | chr1.1:19158863-19158882 | None:intergenic | 40.0% | |
| TCCTGAATGGATCATTGCAA+TGG | - | chr1.1:19158859-19158878 | MS.gene026390:CDS | 40.0% | |
| TGAATGGATCATTGCAATGG+AGG | - | chr1.1:19158862-19158881 | MS.gene026390:CDS | 40.0% | |
| TGAGGAAGCAAAAGGAACAA+AGG | - | chr1.1:19162981-19163000 | MS.gene026390:CDS | 40.0% | |
| TGCTCTTTCAACATTCTCTC+TGG | - | chr1.1:19158709-19158728 | MS.gene026390:intron | 40.0% | |
| TGGTAGACTAAACAAGCGTT+GGG | - | chr1.1:19161355-19161374 | MS.gene026390:intron | 40.0% | |
| TTGACCTGAAGAAATCCCAA+GGG | + | chr1.1:19158081-19158100 | None:intergenic | 40.0% | |
| TTGGTAGACTAAACAAGCGT+TGG | - | chr1.1:19161354-19161373 | MS.gene026390:intron | 40.0% | |
| ! | AAGCATTGTGTTCTGATGCA+TGG | + | chr1.1:19162863-19162882 | None:intergenic | 40.0% |
| ! | CATATCCTCTCCAGAAGTTT+TGG | - | chr1.1:19159412-19159431 | MS.gene026390:intron | 40.0% |
| ! | CCAAAACACTCAGAGTTTTG+TGG | + | chr1.1:19161146-19161165 | None:intergenic | 40.0% |
| ! | CCACAAAACTCTGAGTGTTT+TGG | - | chr1.1:19161143-19161162 | MS.gene026390:intron | 40.0% |
| ! | GGCGATGTGTTTTCTATGAT+GGG | - | chr1.1:19161735-19161754 | MS.gene026390:intron | 40.0% |
| ! | GTTTTCGATCGTATTAGTGC+TGG | - | chr1.1:19160903-19160922 | MS.gene026390:intron | 40.0% |
| ! | TGTTTCTGCCACACAAAAGA+AGG | - | chr1.1:19159850-19159869 | MS.gene026390:CDS | 40.0% |
| ! | TTGGATGAGCTTAAAAGCAC+TGG | - | chr1.1:19162448-19162467 | MS.gene026390:intron | 40.0% |
| ! | TTGTGATAATGTGGATCCAC+TGG | + | chr1.1:19161452-19161471 | None:intergenic | 40.0% |
| !! | TGTCTCATTGGCTCTAAATG+CGG | - | chr1.1:19161999-19162018 | MS.gene026390:intron | 40.0% |
| !! | TTGAGCTTGAATTTTCAGGC+AGG | - | chr1.1:19158582-19158601 | MS.gene026390:CDS | 40.0% |
| !! | TTTTCTATGATGGGAACGGT+TGG | - | chr1.1:19161744-19161763 | MS.gene026390:intron | 40.0% |
| !!! | ATGTCGGTCTTCTTTTTTGG+TGG | + | chr1.1:19160205-19160224 | None:intergenic | 40.0% |
| !!! | CAGTTTTGAGTCATTCTTGG+TGG | - | chr1.1:19162318-19162337 | MS.gene026390:CDS | 40.0% |
| AAACACTCCTCCACATGTAC+AGG | + | chr1.1:19161421-19161440 | None:intergenic | 45.0% | |
| AAGAAGGAAGCCGAGGAATT+TGG | - | chr1.1:19159866-19159885 | MS.gene026390:CDS | 45.0% | |
| AATTCCCATGACAACCATCG+AGG | - | chr1.1:19161767-19161786 | MS.gene026390:intron | 45.0% | |
| ACAGAAAGGCTCTTGAGGAT+TGG | - | chr1.1:19162356-19162375 | MS.gene026390:intron | 45.0% | |
| ATCCTCAAGAGCCTTTCTGT+CGG | + | chr1.1:19162356-19162375 | None:intergenic | 45.0% | |
| CAGAAAGGCTCTTGAGGATT+GGG | - | chr1.1:19162357-19162376 | MS.gene026390:intron | 45.0% | |
| CTATAGACAGGACCTACTGA+TGG | + | chr1.1:19158007-19158026 | None:intergenic | 45.0% | |
| CTCTCTATGTCAAAGGGAGT+TGG | + | chr1.1:19162633-19162652 | None:intergenic | 45.0% | |
| CTGTGAAAGTTGAGGAAGGA+AGG | - | chr1.1:19157960-19157979 | MS.gene026390:CDS | 45.0% | |
| CTTAACAGAATCCCTGCCAA+AGG | + | chr1.1:19158397-19158416 | None:intergenic | 45.0% | |
| CTTCCAAGCATCTGGTTGTT+GGG | + | chr1.1:19158426-19158445 | None:intergenic | 45.0% | |
| GCCTTGCCAAAATCCTATTG+CGG | + | chr1.1:19160723-19160742 | None:intergenic | 45.0% | |
| GCTTGAATCTGTACCAGAGA+TGG | - | chr1.1:19161794-19161813 | MS.gene026390:intron | 45.0% | |
| GGAGATCACTGTGGCATATA+TGG | - | chr1.1:19158827-19158846 | MS.gene026390:CDS | 45.0% | |
| GTCTTACAGAAAGCTGTGCT+GGG | - | chr1.1:19161697-19161716 | MS.gene026390:intron | 45.0% | |
| GTGTCTGAACATCTTCAAGC+AGG | + | chr1.1:19160851-19160870 | None:intergenic | 45.0% | |
| TCACATGTGCCTCAATTGCT+AGG | + | chr1.1:19161961-19161980 | None:intergenic | 45.0% | |
| TCGTCTGTGTCCAAAACTTC+TGG | + | chr1.1:19159425-19159444 | None:intergenic | 45.0% | |
| TGACCTGAAGAAATCCCAAG+GGG | + | chr1.1:19158080-19158099 | None:intergenic | 45.0% | |
| TGGTCGTATACATGAGCAAG+TGG | + | chr1.1:19160668-19160687 | None:intergenic | 45.0% | |
| TGTTACTAGGGAGATCACTG+TGG | - | chr1.1:19158818-19158837 | MS.gene026390:CDS | 45.0% | |
| TTCAGGCAGGACCTTATTCA+TGG | - | chr1.1:19158595-19158614 | MS.gene026390:CDS | 45.0% | |
| TTCCAAGCATCTGGTTGTTG+GGG | + | chr1.1:19158425-19158444 | None:intergenic | 45.0% | |
| TTCTCATGGCTGATCCCATT+TGG | + | chr1.1:19158653-19158672 | None:intergenic | 45.0% | |
| TTGCAGGCGATATTGGAGAA+TGG | - | chr1.1:19162048-19162067 | MS.gene026390:intron | 45.0% | |
| TTGGCAGGGATTCTGTTAAG+AGG | - | chr1.1:19158397-19158416 | MS.gene026390:intron | 45.0% | |
| ! | CGGCGATGTGTTTTCTATGA+TGG | - | chr1.1:19161734-19161753 | MS.gene026390:intron | 45.0% |
| ! | TGTGTCCAAAACTTCTGGAG+AGG | + | chr1.1:19159420-19159439 | None:intergenic | 45.0% |
| !! | AAAGGTGCTGCTTTGTGTTG+TGG | + | chr1.1:19161238-19161257 | None:intergenic | 45.0% |
| !! | TAGACTAAACAAGCGTTGGG+TGG | - | chr1.1:19161358-19161377 | MS.gene026390:intron | 45.0% |
| !! | TTCTGGTTTAGAGTCCCCTT+GGG | - | chr1.1:19158063-19158082 | MS.gene026390:intron | 45.0% |
| AACTCACGGGATTGATGCCA+CGG | + | chr1.1:19158677-19158696 | None:intergenic | 50.0% | |
| ACCTTTGCCTGTACATGTGG+AGG | - | chr1.1:19161411-19161430 | MS.gene026390:CDS | 50.0% | |
| AGTCCCCTTGGGATTTCTTC+AGG | - | chr1.1:19158074-19158093 | MS.gene026390:intron | 50.0% | |
| AGTGCGTCATATCCCATCTC+TGG | + | chr1.1:19161810-19161829 | None:intergenic | 50.0% | |
| ATTGATGCCACGGCTTCTCA+TGG | + | chr1.1:19158667-19158686 | None:intergenic | 50.0% | |
| CAAGGGGACTCTAAACCAGA+AGG | + | chr1.1:19158064-19158083 | None:intergenic | 50.0% | |
| CACACAAAAGAAGGAAGCCG+AGG | - | chr1.1:19159859-19159878 | MS.gene026390:CDS | 50.0% | |
| CATGGCTGATCCCATTTGGA+TGG | + | chr1.1:19158649-19158668 | None:intergenic | 50.0% | |
| CCAACAACCAGATGCTTGGA+AGG | - | chr1.1:19158424-19158443 | MS.gene026390:intron | 50.0% | |
| CCACAGCATTAGGACCTGTT+AGG | + | chr1.1:19159482-19159501 | None:intergenic | 50.0% | |
| CCTAACAGGTCCTAATGCTG+TGG | - | chr1.1:19159479-19159498 | MS.gene026390:CDS | 50.0% | |
| CCTTCCAAGCATCTGGTTGT+TGG | + | chr1.1:19158427-19158446 | None:intergenic | 50.0% | |
| CGTGGAGAAATTTGCCTGAG+AGG | - | chr1.1:19161843-19161862 | MS.gene026390:intron | 50.0% | |
| CTCAGGCAAATTTCTCCACG+CGG | + | chr1.1:19161843-19161862 | None:intergenic | 50.0% | |
| CTCTGGTACAGATTCAAGCC+TGG | + | chr1.1:19161793-19161812 | None:intergenic | 50.0% | |
| GAGTGTTTGAGAGTCACCAG+TGG | - | chr1.1:19161433-19161452 | MS.gene026390:CDS | 50.0% | |
| GCAGGATGTGCCAAATTCCT+CGG | + | chr1.1:19159879-19159898 | None:intergenic | 50.0% | |
| GCGACAAGACCTTACTCAAG+AGG | - | chr1.1:19161893-19161912 | MS.gene026390:intron | 50.0% | |
| GCGACCTATTGCCTCTTCAA+GGG | - | chr1.1:19160695-19160714 | MS.gene026390:CDS | 50.0% | |
| GCTGGGTGTTTCACAGCAAT+CGG | - | chr1.1:19161714-19161733 | MS.gene026390:intron | 50.0% | |
| GGAACAACTGGAGAACCCAA+AGG | - | chr1.1:19160247-19160266 | MS.gene026390:CDS | 50.0% | |
| GGCAATAGGTCGCCATTATC+TGG | + | chr1.1:19160688-19160707 | None:intergenic | 50.0% | |
| GGTCTTACAGAAAGCTGTGC+TGG | - | chr1.1:19161696-19161715 | MS.gene026390:intron | 50.0% | |
| TCCTCAAGAGCCTTTCTGTC+GGG | + | chr1.1:19162355-19162374 | None:intergenic | 50.0% | |
| TCCTCCACATGTACAGGCAA+AGG | + | chr1.1:19161415-19161434 | None:intergenic | 50.0% | |
| TCTGATGGAAGGCCATCAGT+AGG | - | chr1.1:19157992-19158011 | MS.gene026390:intron | 50.0% | |
| TGCACCTTTGCCTGTACATG+TGG | - | chr1.1:19161408-19161427 | MS.gene026390:CDS | 50.0% | |
| TGCGGGAATATACGACCATG+TGG | - | chr1.1:19159979-19159998 | MS.gene026390:intron | 50.0% | |
| TTTGACGCCTTCCAAGCATC+TGG | + | chr1.1:19158434-19158453 | None:intergenic | 50.0% | |
| ! | AGGGAGCCGCAATAGGATTT+TGG | - | chr1.1:19160714-19160733 | MS.gene026390:CDS | 50.0% |
| ! | ATGGTGCCAACTGTCCTGAA+TGG | - | chr1.1:19158846-19158865 | MS.gene026390:CDS | 50.0% |
| ! | CTCGGCTTCCTTCTTTTGTG+TGG | + | chr1.1:19159861-19159880 | None:intergenic | 50.0% |
| ! | GGTCTTATGGAGTTGCCTTC+TGG | - | chr1.1:19158046-19158065 | MS.gene026390:intron | 50.0% |
| ! | TGAGTCATTCTTGGTGGCTG+TGG | - | chr1.1:19162324-19162343 | MS.gene026390:CDS | 50.0% |
| !! | CTTCTGGTTTAGAGTCCCCT+TGG | - | chr1.1:19158062-19158081 | MS.gene026390:intron | 50.0% |
| !! | GCCGCAATAGGATTTTGGCA+AGG | - | chr1.1:19160719-19160738 | MS.gene026390:CDS | 50.0% |
| AAACTCTCCCCAGGAGAAGC+AGG | + | chr1.1:19159897-19159916 | None:intergenic | 55.0% | |
| AAGGTGCAGCTCCTGATAGC+AGG | + | chr1.1:19161396-19161415 | None:intergenic | 55.0% | |
| AGATTCAAGCCTGGCCTCGA+TGG | + | chr1.1:19161784-19161803 | None:intergenic | 55.0% | |
| AGCCCCAACAACCAGATGCT+TGG | - | chr1.1:19158420-19158439 | MS.gene026390:intron | 55.0% | |
| CAACTGGAGAAACTCTCCCC+AGG | + | chr1.1:19159906-19159925 | None:intergenic | 55.0% | |
| CCTCAAGAGCCTTTCTGTCG+GGG | + | chr1.1:19162354-19162373 | None:intergenic | 55.0% | |
| CGCGTTCGTATCCTGCTATC+AGG | - | chr1.1:19161382-19161401 | MS.gene026390:intron | 55.0% | |
| CTATTGCGGCTCCCTTGAAG+AGG | + | chr1.1:19160709-19160728 | None:intergenic | 55.0% | |
| CTCTTCAAGGGAGCCGCAAT+AGG | - | chr1.1:19160707-19160726 | MS.gene026390:CDS | 55.0% | |
| CTGGCCTCGATGGTTGTCAT+GGG | + | chr1.1:19161774-19161793 | None:intergenic | 55.0% | |
| CTGGGGAGAGTTTCTCCAGT+TGG | - | chr1.1:19159904-19159923 | MS.gene026390:intron | 55.0% | |
| GGAAGGCCTGCTACATCTGA+TGG | - | chr1.1:19157977-19157996 | MS.gene026390:intron | 55.0% | |
| GGCCTGCTACATCTGATGGA+AGG | - | chr1.1:19157981-19158000 | MS.gene026390:intron | 55.0% | |
| GGCCTTCCATCAGATGTAGC+AGG | + | chr1.1:19157986-19158005 | None:intergenic | 55.0% | |
| GGCGACCTATTGCCTCTTCA+AGG | - | chr1.1:19160694-19160713 | MS.gene026390:CDS | 55.0% | |
| GGCTCCCTTGAAGAGGCAAT+AGG | + | chr1.1:19160702-19160721 | None:intergenic | 55.0% | |
| TGGCACATCCTGCTTCTCCT+GGG | - | chr1.1:19159886-19159905 | MS.gene026390:intron | 55.0% | |
| TGTGGTAGTCCCCGACAGAA+AGG | - | chr1.1:19162342-19162361 | MS.gene026390:intron | 55.0% | |
| TTAGTCCGCAGCCGCAATTG+TGG | + | chr1.1:19160053-19160072 | None:intergenic | 55.0% | |
| TTGGCACATCCTGCTTCTCC+TGG | - | chr1.1:19159885-19159904 | MS.gene026390:intron | 55.0% | |
| CCATGACAACCATCGAGGCC+AGG | - | chr1.1:19161772-19161791 | MS.gene026390:intron | 60.0% | |
| CCCCGACAGAAAGGCTCTTG+AGG | - | chr1.1:19162351-19162370 | MS.gene026390:intron | 60.0% | |
| CCTGGCCTCGATGGTTGTCA+TGG | + | chr1.1:19161775-19161794 | None:intergenic | 60.0% | |
| GGATCAGCCATGAGAAGCCG+TGG | - | chr1.1:19158657-19158676 | MS.gene026390:intron | 60.0% | |
| GGCACATCCTGCTTCTCCTG+GGG | - | chr1.1:19159887-19159906 | MS.gene026390:intron | 60.0% | |
| TGTGGCCACAATTGCGGCTG+CGG | - | chr1.1:19160045-19160064 | MS.gene026390:CDS | 60.0% | |
| ! | GCACTTTCTAGTGAGCCGCG+TGG | - | chr1.1:19161825-19161844 | MS.gene026390:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 19157944 | 19163008 | 19157944 | ID=MS.gene026390 |
| chr1.1 | mRNA | 19157944 | 19163008 | 19157944 | ID=MS.gene026390.t1;Parent=MS.gene026390 |
| chr1.1 | exon | 19162857 | 19163008 | 19162857 | ID=MS.gene026390.t1.exon1;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19162857 | 19163008 | 19162857 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19162485 | 19162548 | 19162485 | ID=MS.gene026390.t1.exon2;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19162485 | 19162548 | 19162485 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19162263 | 19162352 | 19162263 | ID=MS.gene026390.t1.exon3;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19162263 | 19162352 | 19162263 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19162069 | 19162125 | 19162069 | ID=MS.gene026390.t1.exon4;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19162069 | 19162125 | 19162069 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19161918 | 19161966 | 19161918 | ID=MS.gene026390.t1.exon5;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19161918 | 19161966 | 19161918 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19161389 | 19161465 | 19161389 | ID=MS.gene026390.t1.exon6;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19161389 | 19161465 | 19161389 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19161225 | 19161264 | 19161225 | ID=MS.gene026390.t1.exon7;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19161225 | 19161264 | 19161225 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19161027 | 19161121 | 19161027 | ID=MS.gene026390.t1.exon8;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19161027 | 19161121 | 19161027 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19160607 | 19160771 | 19160607 | ID=MS.gene026390.t1.exon9;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19160607 | 19160771 | 19160607 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19160210 | 19160326 | 19160210 | ID=MS.gene026390.t1.exon10;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19160210 | 19160326 | 19160210 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19160028 | 19160115 | 19160028 | ID=MS.gene026390.t1.exon11;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19160028 | 19160115 | 19160028 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19159821 | 19159887 | 19159821 | ID=MS.gene026390.t1.exon12;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19159821 | 19159887 | 19159821 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19159670 | 19159745 | 19159670 | ID=MS.gene026390.t1.exon13;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19159670 | 19159745 | 19159670 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19159474 | 19159591 | 19159474 | ID=MS.gene026390.t1.exon14;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19159474 | 19159591 | 19159474 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19159010 | 19159255 | 19159010 | ID=MS.gene026390.t1.exon15;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19159010 | 19159255 | 19159010 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19158759 | 19158898 | 19158759 | ID=MS.gene026390.t1.exon16;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19158759 | 19158898 | 19158759 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19158469 | 19158651 | 19158469 | ID=MS.gene026390.t1.exon17;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19158469 | 19158651 | 19158469 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19158242 | 19158361 | 19158242 | ID=MS.gene026390.t1.exon18;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19158242 | 19158361 | 19158242 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| chr1.1 | exon | 19157944 | 19157991 | 19157944 | ID=MS.gene026390.t1.exon19;Parent=MS.gene026390.t1 |
| chr1.1 | CDS | 19157944 | 19157991 | 19157944 | ID=cds.MS.gene026390.t1;Parent=MS.gene026390.t1 |
| Gene Sequence |
| Protein sequence |