Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028013.t1 | XP_003612702.1 | 98.2 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 2.90E-209 | 737.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028013.t1 | Q8GYA6 | 83.2 | 388 | 63 | 1 | 1 | 388 | 1 | 386 | 2.1e-184 | 646.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028013.t1 | G7K9K1 | 98.2 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 2.1e-209 | 737.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene002648 | MS.gene028013 | PPI |
| MS.gene56675 | MS.gene028013 | PPI |
| MS.gene58136 | MS.gene028013 | PPI |
| MS.gene58134 | MS.gene028013 | PPI |
| MS.gene69716 | MS.gene028013 | PPI |
| MS.gene98447 | MS.gene028013 | PPI |
| MS.gene28183 | MS.gene028013 | PPI |
| MS.gene72901 | MS.gene028013 | PPI |
| MS.gene044013 | MS.gene028013 | PPI |
| MS.gene062770 | MS.gene028013 | PPI |
| MS.gene028013 | MS.gene80661 | PPI |
| MS.gene008081 | MS.gene028013 | PPI |
| MS.gene030686 | MS.gene028013 | PPI |
| MS.gene057320 | MS.gene028013 | PPI |
| MS.gene28454 | MS.gene028013 | PPI |
| MS.gene004328 | MS.gene028013 | PPI |
| MS.gene70283 | MS.gene028013 | PPI |
| MS.gene030685 | MS.gene028013 | PPI |
| MS.gene031999 | MS.gene028013 | PPI |
| MS.gene24375 | MS.gene028013 | PPI |
| MS.gene69251 | MS.gene028013 | PPI |
| MS.gene67099 | MS.gene028013 | PPI |
| MS.gene028013 | MS.gene80790 | PPI |
| MS.gene29607 | MS.gene028013 | PPI |
| MS.gene70282 | MS.gene028013 | PPI |
| MS.gene72902 | MS.gene028013 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028013.t1 | MTR_5g027960 | 98.196 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 0.0 | 772 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028013.t1 | AT4G19006 | 83.247 | 388 | 63 | 1 | 1 | 388 | 1 | 386 | 0.0 | 673 |
| MS.gene028013.t1 | AT5G45620 | 82.732 | 388 | 65 | 1 | 1 | 388 | 1 | 386 | 0.0 | 671 |
| MS.gene028013.t1 | AT4G19006 | 73.243 | 441 | 63 | 2 | 1 | 388 | 1 | 439 | 0.0 | 649 |
| MS.gene028013.t1 | AT5G45620 | 84.259 | 324 | 49 | 1 | 1 | 324 | 1 | 322 | 0.0 | 567 |
Find 84 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGTGCTCTTCTCTATT+TGG | 0.148267 | 5.3:+17387593 | MS.gene028013:CDS |
| TGCAAGAATCTTCTGGAAAA+TGG | 0.170541 | 5.3:+17387462 | MS.gene028013:CDS |
| CTTGTCCCTTTCTGCTTTGC+TGG | 0.176193 | 5.3:+17388622 | MS.gene028013:CDS |
| CGACAGATTAAGAGCCTTCT+AGG | 0.205081 | 5.3:+17388775 | MS.gene028013:intron |
| GCAGAAACACCTGATTTAAT+TGG | 0.231748 | 5.3:+17390051 | MS.gene028013:CDS |
| GGCATTTAATTCTGGTGATT+TGG | 0.264559 | 5.3:+17388837 | MS.gene028013:CDS |
| CTGTGTATGCGAGCTATTAC+TGG | 0.301939 | 5.3:+17387523 | MS.gene028013:CDS |
| CTGGGTGCAACCAAGAGTTC+TGG | 0.325908 | 5.3:+17389948 | MS.gene028013:CDS |
| GAAGATTCTTGCATTCCTTT+TGG | 0.328435 | 5.3:-17387452 | None:intergenic |
| AGGGCACAGTACATGTTTCC+TGG | 0.330946 | 5.3:+17389929 | MS.gene028013:CDS |
| TTGTACCATTCACCGAGTTC+AGG | 0.331765 | 5.3:-17385623 | None:intergenic |
| ACCTTGCTCAAGCTTGAATA+AGG | 0.333906 | 5.3:-17387427 | None:intergenic |
| AAAGGAATGCAAGAATCTTC+TGG | 0.334571 | 5.3:+17387455 | MS.gene028013:CDS |
| GGCTATTTGCAGCCGGCCTT+CGG | 0.343497 | 5.3:+17389072 | MS.gene028013:intron |
| CAATTTGCATCTTAATGTAT+AGG | 0.364510 | 5.3:-17387404 | None:intergenic |
| TTGTCCCTTTCTGCTTTGCT+GGG | 0.384321 | 5.3:+17388623 | MS.gene028013:CDS |
| GCTGATGCCATAACTTCTTC+TGG | 0.398801 | 5.3:-17385664 | None:intergenic |
| GCAAGAATCTTCTGGAAAAT+GGG | 0.416747 | 5.3:+17387463 | MS.gene028013:CDS |
| GGGGATAACATCTACAACTT+TGG | 0.433711 | 5.3:+17388644 | MS.gene028013:CDS |
| GTCTGATGGAAATTATATTC+AGG | 0.441429 | 5.3:+17388962 | MS.gene028013:CDS |
| TGAACAGATAAAATCCTTAC+GGG | 0.442242 | 5.3:+17389975 | MS.gene028013:CDS |
| ATTCACGATCCAATTAAATC+AGG | 0.446172 | 5.3:-17390060 | None:intergenic |
| TTCCAGGTTCATCTGATTGA+GGG | 0.450314 | 5.3:+17389889 | MS.gene028013:intron |
| TTGAACAGATAAAATCCTTA+CGG | 0.468324 | 5.3:+17389974 | MS.gene028013:CDS |
| TGTTCAATACCCAGAACTCT+TGG | 0.469920 | 5.3:-17389958 | None:intergenic |
| TGGGTGCAACCAAGAGTTCT+GGG | 0.471407 | 5.3:+17389949 | MS.gene028013:CDS |
| ATTCCAGGTTCATCTGATTG+AGG | 0.471689 | 5.3:+17389888 | MS.gene028013:intron |
| GCTGCCATTGGTTATCTTGA+AGG | 0.473495 | 5.3:+17387330 | MS.gene028013:CDS |
| AAAATCCTTACGGGATCGAT+TGG | 0.484091 | 5.3:+17389984 | MS.gene028013:CDS |
| ATTAAGAGCCTTCTAGGGCC+AGG | 0.485594 | 5.3:+17388781 | MS.gene028013:CDS |
| CTGCCATTGGTTATCTTGAA+GGG | 0.488971 | 5.3:+17387331 | MS.gene028013:CDS |
| TACGGGATCGATTGGACGGT+TGG | 0.490235 | 5.3:+17389992 | MS.gene028013:CDS |
| TGTACCATTCACCGAGTTCA+GGG | 0.493012 | 5.3:-17385622 | None:intergenic |
| ATCTGTACCAGAAGAAGTTA+TGG | 0.497476 | 5.3:+17385657 | MS.gene028013:CDS |
| CTCACCCTGAACTCGGTGAA+TGG | 0.501156 | 5.3:+17385618 | MS.gene028013:CDS |
| ATCAGGTGTTTCTGCCTCGA+TGG | 0.508687 | 5.3:-17390043 | None:intergenic |
| GTCCCTTTCTGCTTTGCTGG+GGG | 0.511217 | 5.3:+17388625 | MS.gene028013:CDS |
| GATCAACATTCTGTGTCTGA+TGG | 0.511761 | 5.3:+17388948 | MS.gene028013:CDS |
| TCAATATCACAAATCCCGTC+AGG | 0.511791 | 5.3:+17387554 | MS.gene028013:CDS |
| GCTTGAGCAAGGTGACCAAA+AGG | 0.513089 | 5.3:+17387437 | MS.gene028013:CDS |
| GATCGATTGGACGGTTGGAC+CGG | 0.514901 | 5.3:+17389997 | MS.gene028013:CDS |
| TGTAAATACTCACAATAGGA+TGG | 0.517964 | 5.3:-17388679 | None:intergenic |
| TTACAGATAGGCTCTTCATA+AGG | 0.525497 | 5.3:-17389165 | None:intergenic |
| TAAAATCAACCTTCTCAAGT+TGG | 0.525894 | 5.3:+17387263 | MS.gene028013:CDS |
| GCCTTATTCAAGCTTGAGCA+AGG | 0.527580 | 5.3:+17387426 | MS.gene028013:CDS |
| GAGAACTTCGAAGCGATTCA+AGG | 0.528592 | 5.3:-17385598 | None:intergenic |
| TCAAAATGAACAGAAGCTGT+TGG | 0.529532 | 5.3:+17388921 | MS.gene028013:CDS |
| GGGCACAGTACATGTTTCCT+GGG | 0.529779 | 5.3:+17389930 | MS.gene028013:CDS |
| CGAAGTTCTCACCCTGAACT+CGG | 0.534607 | 5.3:+17385611 | MS.gene028013:CDS |
| TCGATATCAAGAATTATGTC+AGG | 0.541395 | 5.3:+17388861 | MS.gene028013:CDS |
| TAGTTCGATCTTCCGAAGGC+CGG | 0.546687 | 5.3:-17389084 | None:intergenic |
| CGCTCTGCAATAACACTCAA+GGG | 0.547253 | 5.3:-17389109 | None:intergenic |
| TTCTATGCGCTGCTCTCTAG+TGG | 0.551669 | 5.3:-17387373 | None:intergenic |
| TCTGAGAAAGAAGCTGCCAT+TGG | 0.552784 | 5.3:+17387318 | MS.gene028013:CDS |
| AAAACTTTCTATAGAGAATG+TGG | 0.554790 | 5.3:+17389135 | MS.gene028013:CDS |
| AAGGTATTGCAGTGCAGCCA+TGG | 0.555178 | 5.3:-17385579 | None:intergenic |
| TGAGGGTATAATTGATCAAG+TGG | 0.558787 | 5.3:+17389906 | MS.gene028013:CDS |
| CAAAATGTGCCAACTTGAGA+AGG | 0.559547 | 5.3:-17387272 | None:intergenic |
| TGTCCCTTTCTGCTTTGCTG+GGG | 0.560242 | 5.3:+17388624 | MS.gene028013:CDS |
| GACAGATTAAGAGCCTTCTA+GGG | 0.563638 | 5.3:+17388776 | MS.gene028013:intron |
| TTAAGAGCCTTCTAGGGCCA+GGG | 0.569610 | 5.3:+17388782 | MS.gene028013:CDS |
| TCTAGGGCCAGGGTCAAAAG+TGG | 0.575982 | 5.3:+17388792 | MS.gene028013:CDS |
| ACCGTCCAATCGATCCCGTA+AGG | 0.577387 | 5.3:-17389989 | None:intergenic |
| GTAAATACTCACAATAGGAT+GGG | 0.577630 | 5.3:-17388678 | None:intergenic |
| TTGCTGTGATGGTTTCTCGA+CGG | 0.578421 | 5.3:+17387292 | MS.gene028013:CDS |
| TCGCTCTGCAATAACACTCA+AGG | 0.579629 | 5.3:-17389110 | None:intergenic |
| TGCATCTTAATGTATAGGAT+AGG | 0.580855 | 5.3:-17387399 | None:intergenic |
| TCTCTCTGACTCATTCAAGC+TGG | 0.583254 | 5.3:+17387635 | MS.gene028013:CDS |
| TCCTTACGGGATCGATTGGA+CGG | 0.584260 | 5.3:+17389988 | MS.gene028013:CDS |
| AAACTCAGCAAATTCCTGAC+GGG | 0.585720 | 5.3:-17387568 | None:intergenic |
| TGCCATTGGTTATCTTGAAG+GGG | 0.587336 | 5.3:+17387332 | MS.gene028013:CDS |
| TAATAGCTCGCATACACAGT+TGG | 0.595991 | 5.3:-17387519 | None:intergenic |
| CTATTTGGCATACACATCAG+TGG | 0.599964 | 5.3:+17387608 | MS.gene028013:CDS |
| GGCCAGGGTCAAAAGTGGAA+TGG | 0.600287 | 5.3:+17388797 | MS.gene028013:CDS |
| TGTGTATGCGAGCTATTACT+GGG | 0.603316 | 5.3:+17387524 | MS.gene028013:CDS |
| GACCCCTTCAAGATAACCAA+TGG | 0.621964 | 5.3:-17387334 | None:intergenic |
| AAAACTCAGCAAATTCCTGA+CGG | 0.624927 | 5.3:-17387569 | None:intergenic |
| GGTATAATTGATCAAGTGGA+GGG | 0.641521 | 5.3:+17389910 | MS.gene028013:CDS |
| GGAATAGTTCGATCTTCCGA+AGG | 0.642595 | 5.3:-17389088 | None:intergenic |
| GGGTATAATTGATCAAGTGG+AGG | 0.645121 | 5.3:+17389909 | MS.gene028013:CDS |
| CGCGGCGTTGTTGTCCATCG+AGG | 0.648030 | 5.3:+17390029 | MS.gene028013:CDS |
| TGAATGGTACAATTCTCTTG+CGG | 0.666797 | 5.3:+17385634 | MS.gene028013:CDS |
| CAGAACTCTTGGTTGCACCC+AGG | 0.676624 | 5.3:-17389947 | None:intergenic |
| TTGGACCGGAAAAGTACACG+CGG | 0.778962 | 5.3:+17390011 | MS.gene028013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATGTTTTTATTGAAAAT+TGG | + | chr5.3:17388477-17388496 | MS.gene028013:intron | 10.0% |
| !!! | CACTTTTTATTATATTATTA+TGG | + | chr5.3:17386241-17386260 | MS.gene028013:intron | 10.0% |
| !! | ACTAAAATCAAATGAAAATT+TGG | - | chr5.3:17386963-17386982 | None:intergenic | 15.0% |
| !! | AGTAACAAAAATTAAACTAT+TGG | - | chr5.3:17385768-17385787 | None:intergenic | 15.0% |
| !! | ATAATTATGAAAAACCAATT+AGG | - | chr5.3:17388378-17388397 | None:intergenic | 15.0% |
| !! | CGATATATAAATTCAAAAAA+GGG | + | chr5.3:17388166-17388185 | MS.gene028013:intron | 15.0% |
| !! | GTGTATTAATTTAATAAGTA+AGG | - | chr5.3:17388441-17388460 | None:intergenic | 15.0% |
| !! | GTTTATAATTATTTGTTTGA+CGG | + | chr5.3:17387166-17387185 | MS.gene028013:intron | 15.0% |
| !! | TACTTATTAAATTAATACAC+AGG | + | chr5.3:17388441-17388460 | MS.gene028013:intron | 15.0% |
| !!! | ACTATATGAAATTGAATTTT+GGG | + | chr5.3:17386017-17386036 | MS.gene028013:intron | 15.0% |
| !!! | ATGCTTTTATTTTTGTATTT+TGG | + | chr5.3:17389541-17389560 | MS.gene028013:intron | 15.0% |
| !!! | ATTTTCATTTGATTTTAGTT+CGG | + | chr5.3:17386964-17386983 | MS.gene028013:intron | 15.0% |
| !!! | CCTTTTTTGAATTTATATAT+CGG | - | chr5.3:17388168-17388187 | None:intergenic | 15.0% |
| !!! | CTATTTTGTTTTGTTTTTTA+GGG | + | chr5.3:17385881-17385900 | MS.gene028013:intron | 15.0% |
| !!! | TACTATATGAAATTGAATTT+TGG | + | chr5.3:17386016-17386035 | MS.gene028013:intron | 15.0% |
| !!! | TCTATTTTGTTTTGTTTTTT+AGG | + | chr5.3:17385880-17385899 | MS.gene028013:intron | 15.0% |
| !!! | TTAGATTTGTATTTTTGTTT+GGG | + | chr5.3:17386099-17386118 | MS.gene028013:intron | 15.0% |
| !!! | TTTAGATTTGTATTTTTGTT+TGG | + | chr5.3:17386098-17386117 | MS.gene028013:intron | 15.0% |
| !! | AATGTATAAGAGAAACTATT+AGG | + | chr5.3:17386612-17386631 | MS.gene028013:intron | 20.0% |
| !! | ATGTGATAAAAATATTAGAC+AGG | - | chr5.3:17386806-17386825 | None:intergenic | 20.0% |
| !! | ATTAGAAGAAATAAGAAACA+GGG | - | chr5.3:17387087-17387106 | None:intergenic | 20.0% |
| !! | CAAAATTTCAACATTAACAA+TGG | - | chr5.3:17389617-17389636 | None:intergenic | 20.0% |
| !! | CATTTATAAAAAGATTGCAA+GGG | - | chr5.3:17386367-17386386 | None:intergenic | 20.0% |
| !! | CCGATATATAAATTCAAAAA+AGG | + | chr5.3:17388165-17388184 | MS.gene028013:intron | 20.0% |
| !! | TAATCTACTAAAGAATCTAA+AGG | - | chr5.3:17386527-17386546 | None:intergenic | 20.0% |
| !! | TATATGAACAAATTTATTCC+AGG | + | chr5.3:17389873-17389892 | MS.gene028013:intron | 20.0% |
| !! | TATTAGAAGAAATAAGAAAC+AGG | - | chr5.3:17387088-17387107 | None:intergenic | 20.0% |
| !! | TGAAAAAATTTAAATCCCAT+CGG | - | chr5.3:17386838-17386857 | None:intergenic | 20.0% |
| !! | TTTGCGGTTTATTAAAATTA+GGG | + | chr5.3:17385798-17385817 | MS.gene028013:intron | 20.0% |
| !!! | AACTAATTCAAAAGTAGTTT+TGG | - | chr5.3:17388020-17388039 | None:intergenic | 20.0% |
| !!! | ACTAATTCAAAAGTAGTTTT+GGG | - | chr5.3:17388019-17388038 | None:intergenic | 20.0% |
| !!! | ATTTAGAATTAGGATTTTGT+TGG | + | chr5.3:17386049-17386068 | MS.gene028013:intron | 20.0% |
| !!! | CAAATTTTGCTATTCAAATT+TGG | + | chr5.3:17389514-17389533 | MS.gene028013:intron | 20.0% |
| !!! | CATTGTTAATGTTGAAATTT+TGG | + | chr5.3:17389615-17389634 | MS.gene028013:intron | 20.0% |
| !!! | GCAAACTTCTTTTTTTTAAA+TGG | - | chr5.3:17389804-17389823 | None:intergenic | 20.0% |
| !!! | GGAATAAATTTGTTCATATA+AGG | - | chr5.3:17389873-17389892 | None:intergenic | 20.0% |
| !!! | GTTACTTAGTTTTAATTTTG+CGG | + | chr5.3:17385782-17385801 | MS.gene028013:intron | 20.0% |
| !!! | GTTTCTCTTATACATTTTAT+AGG | - | chr5.3:17386608-17386627 | None:intergenic | 20.0% |
| !!! | TAGATTTGTATTTTTGTTTG+GGG | + | chr5.3:17386100-17386119 | MS.gene028013:intron | 20.0% |
| !!! | TATTATTATGGTTTGAGATA+TGG | + | chr5.3:17386253-17386272 | MS.gene028013:intron | 20.0% |
| !!! | TTTTGCGGTTTATTAAAATT+AGG | + | chr5.3:17385797-17385816 | MS.gene028013:intron | 20.0% |
| !!! | TTTTTTAAATGCTTCTTATC+TGG | + | chr5.3:17388708-17388727 | MS.gene028013:intron | 20.0% |
| ! | AAAACTTTCTATAGAGAATG+TGG | + | chr5.3:17389135-17389154 | MS.gene028013:CDS | 25.0% |
| ! | AATACACAGGACTTATAATA+AGG | + | chr5.3:17388454-17388473 | MS.gene028013:intron | 25.0% |
| ! | AATTATCACACTAAAAGTCA+TGG | - | chr5.3:17387119-17387138 | None:intergenic | 25.0% |
| ! | ACTTCACAAACAAAACAAAA+AGG | - | chr5.3:17389826-17389845 | None:intergenic | 25.0% |
| ! | ATAAAATCCAGATTGATAAG+GGG | - | chr5.3:17387807-17387826 | None:intergenic | 25.0% |
| ! | ATATTAGTTAATGCAGGATT+TGG | + | chr5.3:17388592-17388611 | MS.gene028013:intron | 25.0% |
| ! | ATCCTTAATTATGAACATCT+AGG | - | chr5.3:17389735-17389754 | None:intergenic | 25.0% |
| ! | ATGATGTAAATACTCACAAT+AGG | - | chr5.3:17388686-17388705 | None:intergenic | 25.0% |
| ! | ATTTCAACATTAACAATGGA+AGG | - | chr5.3:17389613-17389632 | None:intergenic | 25.0% |
| ! | CAATTTGCATCTTAATGTAT+AGG | - | chr5.3:17387407-17387426 | None:intergenic | 25.0% |
| ! | CATAAAATCCAGATTGATAA+GGG | - | chr5.3:17387808-17387827 | None:intergenic | 25.0% |
| ! | CCATTTATAAAAAGATTGCA+AGG | - | chr5.3:17386368-17386387 | None:intergenic | 25.0% |
| ! | GAAAAAAATCATAGACAAGT+TGG | - | chr5.3:17388554-17388573 | None:intergenic | 25.0% |
| ! | GATATGATATTAGTTAATGC+AGG | + | chr5.3:17388586-17388605 | MS.gene028013:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr5.3:17386665-17386684 | None:intergenic | 25.0% |
| ! | TAAAAATATTAGACAGGCTA+AGG | - | chr5.3:17386800-17386819 | None:intergenic | 25.0% |
| ! | TAACAATGGAAGGTAAAAAA+AGG | - | chr5.3:17389603-17389622 | None:intergenic | 25.0% |
| ! | TACCTAGATGTTCATAATTA+AGG | + | chr5.3:17389730-17389749 | MS.gene028013:intron | 25.0% |
| ! | TAGCAAAATTTGTCATTAGA+TGG | - | chr5.3:17389506-17389525 | None:intergenic | 25.0% |
| ! | TCATAAAATCCAGATTGATA+AGG | - | chr5.3:17387809-17387828 | None:intergenic | 25.0% |
| ! | TCTAAACATAGATTGAACAA+TGG | - | chr5.3:17386889-17386908 | None:intergenic | 25.0% |
| ! | TCTTTACATCATAGAAACTT+AGG | + | chr5.3:17387835-17387854 | MS.gene028013:intron | 25.0% |
| ! | TGATCAAGTGTATCATAAAT+TGG | + | chr5.3:17386394-17386413 | MS.gene028013:intron | 25.0% |
| ! | TTAACTAATATCATATCTGC+TGG | - | chr5.3:17388583-17388602 | None:intergenic | 25.0% |
| ! | TTGAACAGATAAAATCCTTA+CGG | + | chr5.3:17389974-17389993 | MS.gene028013:CDS | 25.0% |
| ! | TTTATTTCCAACTCAATTGA+TGG | + | chr5.3:17389048-17389067 | MS.gene028013:intron | 25.0% |
| !! | ATCAATCTGGATTTTATGAT+TGG | + | chr5.3:17387810-17387829 | MS.gene028013:intron | 25.0% |
| !! | ATTAGGGTTTCTGTTAATTT+TGG | + | chr5.3:17385814-17385833 | MS.gene028013:intron | 25.0% |
| !! | CCTTGCAATCTTTTTATAAA+TGG | + | chr5.3:17386365-17386384 | MS.gene028013:intron | 25.0% |
| !! | TCAATCTGGATTTTATGATT+GGG | + | chr5.3:17387811-17387830 | MS.gene028013:intron | 25.0% |
| !! | TTAGGGTTTCTGTTAATTTT+GGG | + | chr5.3:17385815-17385834 | MS.gene028013:intron | 25.0% |
| !! | TTGTTGGAAACTGAAATTTT+GGG | + | chr5.3:17386065-17386084 | MS.gene028013:intron | 25.0% |
| !! | TTTGTTGGAAACTGAAATTT+TGG | + | chr5.3:17386064-17386083 | MS.gene028013:intron | 25.0% |
| !!! | TCGGCTTATGTAATTTTTTA+AGG | + | chr5.3:17389327-17389346 | MS.gene028013:intron | 25.0% |
| !!! | TTTGTTTTTTAGGGTTTGAT+TGG | + | chr5.3:17385890-17385909 | MS.gene028013:intron | 25.0% |
| !!! | TTTTGTTTTGTTTGTGAAGT+TGG | + | chr5.3:17389826-17389845 | MS.gene028013:intron | 25.0% |
| AGATTTAGAGATCAATGAGT+TGG | + | chr5.3:17386637-17386656 | MS.gene028013:intron | 30.0% | |
| AGCCAAAATATCTACATCTT+TGG | - | chr5.3:17386328-17386347 | None:intergenic | 30.0% | |
| ATAAGAAACAGGGATATCAA+TGG | - | chr5.3:17387077-17387096 | None:intergenic | 30.0% | |
| ATATAGTAGTTATGCAACAC+AGG | + | chr5.3:17387909-17387928 | MS.gene028013:intron | 30.0% | |
| ATGTTATCACCAGAAGAATT+AGG | + | chr5.3:17389407-17389426 | MS.gene028013:intron | 30.0% | |
| ATTGGAATTGTGGTAAAGAT+GGG | + | chr5.3:17385908-17385927 | MS.gene028013:intron | 30.0% | |
| ATTGTCGAAATCATCACATT+CGG | + | chr5.3:17389003-17389022 | MS.gene028013:intron | 30.0% | |
| CAGAAGAATCAACTTAGTTT+AGG | - | chr5.3:17389449-17389468 | None:intergenic | 30.0% | |
| CATGCTCTTATGTTAATGTA+AGG | - | chr5.3:17387743-17387762 | None:intergenic | 30.0% | |
| CTTTAGTAGATTATGCAGTA+AGG | + | chr5.3:17386534-17386553 | MS.gene028013:intron | 30.0% | |
| GTAAATACTCACAATAGGAT+GGG | - | chr5.3:17388681-17388700 | None:intergenic | 30.0% | |
| GTCTGATGGAAATTATATTC+AGG | + | chr5.3:17388962-17388981 | MS.gene028013:CDS | 30.0% | |
| TAAAATCAACCTTCTCAAGT+TGG | + | chr5.3:17387263-17387282 | MS.gene028013:CDS | 30.0% | |
| TCGATATCAAGAATTATGTC+AGG | + | chr5.3:17388861-17388880 | MS.gene028013:CDS | 30.0% | |
| TGAAAGCTTACTACTTTGTA+TGG | - | chr5.3:17389230-17389249 | None:intergenic | 30.0% | |
| TGAACAGATAAAATCCTTAC+GGG | + | chr5.3:17389975-17389994 | MS.gene028013:CDS | 30.0% | |
| TGCATCTTAATGTATAGGAT+AGG | - | chr5.3:17387402-17387421 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACATTC+TGG | + | chr5.3:17386669-17386688 | MS.gene028013:intron | 30.0% | |
| TGTAAATACTCACAATAGGA+TGG | - | chr5.3:17388682-17388701 | None:intergenic | 30.0% | |
| TGTTTCTTAGTATTGTGTTG+TGG | + | chr5.3:17388126-17388145 | MS.gene028013:intron | 30.0% | |
| TTATATATCGGCATACAGAT+AGG | - | chr5.3:17388156-17388175 | None:intergenic | 30.0% | |
| ! | ATAATTTGAGACAGCACAAA+AGG | - | chr5.3:17387705-17387724 | None:intergenic | 30.0% |
| ! | ATTTTGCAGGCATTTAATTC+TGG | + | chr5.3:17388829-17388848 | MS.gene028013:CDS | 30.0% |
| ! | GACCAAAGATGTAGATATTT+TGG | + | chr5.3:17386323-17386342 | MS.gene028013:intron | 30.0% |
| ! | TGACGATTTTGTTGATGTTA+GGG | + | chr5.3:17385854-17385873 | MS.gene028013:intron | 30.0% |
| ! | TGTTTAGCTTCATTCTTCAA+TGG | + | chr5.3:17387001-17387020 | MS.gene028013:intron | 30.0% |
| !! | AAATTGAATTTTGGGTGTTG+GGG | + | chr5.3:17386025-17386044 | MS.gene028013:intron | 30.0% |
| !! | ATTTGTATTTTTGTTTGGGG+AGG | + | chr5.3:17386103-17386122 | MS.gene028013:intron | 30.0% |
| !! | GAAATTGAATTTTGGGTGTT+GGG | + | chr5.3:17386024-17386043 | MS.gene028013:intron | 30.0% |
| !! | TAGAAAGTACCTTAAAGTTC+AGG | + | chr5.3:17388204-17388223 | MS.gene028013:intron | 30.0% |
| !! | TATCAATCACGTTTTCAAGA+AGG | - | chr5.3:17386287-17386306 | None:intergenic | 30.0% |
| !! | TGAAATTGAATTTTGGGTGT+TGG | + | chr5.3:17386023-17386042 | MS.gene028013:intron | 30.0% |
| !! | TTTGTATTTTTGTTTGGGGA+GGG | + | chr5.3:17386104-17386123 | MS.gene028013:intron | 30.0% |
| AAAACTCAGCAAATTCCTGA+CGG | - | chr5.3:17387572-17387591 | None:intergenic | 35.0% | |
| AAAGGAATGCAAGAATCTTC+TGG | + | chr5.3:17387455-17387474 | MS.gene028013:CDS | 35.0% | |
| AATTTCTTCACTCTGCTTGT+TGG | + | chr5.3:17388731-17388750 | MS.gene028013:intron | 35.0% | |
| AGAAAACAGCCTAATTCTTC+TGG | - | chr5.3:17389419-17389438 | None:intergenic | 35.0% | |
| AGTAAGGAAAGTAGATCAGA+TGG | + | chr5.3:17386489-17386508 | MS.gene028013:intron | 35.0% | |
| ATATCAATGGCAAACACAGA+AGG | - | chr5.3:17387064-17387083 | None:intergenic | 35.0% | |
| ATCTGTACCAGAAGAAGTTA+TGG | + | chr5.3:17385657-17385676 | MS.gene028013:CDS | 35.0% | |
| ATTTCCAACTCAATTGATGG+TGG | + | chr5.3:17389051-17389070 | MS.gene028013:intron | 35.0% | |
| CAAACCAGAGCAATTTCTAA+CGG | - | chr5.3:17389690-17389709 | None:intergenic | 35.0% | |
| CAACTATCATCAGAGACAAA+GGG | + | chr5.3:17388349-17388368 | MS.gene028013:intron | 35.0% | |
| CTGATCTACTTTCCTTACTA+CGG | - | chr5.3:17386488-17386507 | None:intergenic | 35.0% | |
| CTTAACTACCATTAAGACCT+AGG | - | chr5.3:17388301-17388320 | None:intergenic | 35.0% | |
| GAGTATTCTTACTTAGGATC+AGG | + | chr5.3:17387188-17387207 | MS.gene028013:intron | 35.0% | |
| GATTGGAATTGTGGTAAAGA+TGG | + | chr5.3:17385907-17385926 | MS.gene028013:intron | 35.0% | |
| GCAGAAACACCTGATTTAAT+TGG | + | chr5.3:17390051-17390070 | MS.gene028013:CDS | 35.0% | |
| GGCATTTAATTCTGGTGATT+TGG | + | chr5.3:17388837-17388856 | MS.gene028013:CDS | 35.0% | |
| GGTATAATTGATCAAGTGGA+GGG | + | chr5.3:17389910-17389929 | MS.gene028013:CDS | 35.0% | |
| GTCTTTCGATTCCTATTTCA+GGG | + | chr5.3:17389661-17389680 | MS.gene028013:intron | 35.0% | |
| GTGTATTTGGACCTGAAAAA+CGG | - | chr5.3:17385723-17385742 | None:intergenic | 35.0% | |
| GTTGGACACAGATTAATGTT+GGG | - | chr5.3:17388234-17388253 | None:intergenic | 35.0% | |
| TAGCAAATCTTCTCCATCAT+TGG | + | chr5.3:17386860-17386879 | MS.gene028013:intron | 35.0% | |
| TCAAAATGAACAGAAGCTGT+TGG | + | chr5.3:17388921-17388940 | MS.gene028013:CDS | 35.0% | |
| TCAACTATCATCAGAGACAA+AGG | + | chr5.3:17388348-17388367 | MS.gene028013:intron | 35.0% | |
| TGAACAATGGTTTCCAATGA+TGG | - | chr5.3:17386876-17386895 | None:intergenic | 35.0% | |
| TGAATGGTACAATTCTCTTG+CGG | + | chr5.3:17385634-17385653 | MS.gene028013:CDS | 35.0% | |
| TGTCTTTCGATTCCTATTTC+AGG | + | chr5.3:17389660-17389679 | MS.gene028013:intron | 35.0% | |
| TGTTGGACACAGATTAATGT+TGG | - | chr5.3:17388235-17388254 | None:intergenic | 35.0% | |
| TTACAGATAGGCTCTTCATA+AGG | - | chr5.3:17389168-17389187 | None:intergenic | 35.0% | |
| TTAGGGTTTGATTGGAATTG+TGG | + | chr5.3:17385898-17385917 | MS.gene028013:intron | 35.0% | |
| TTCAAGTCGAACTTACAGAT+AGG | - | chr5.3:17389180-17389199 | None:intergenic | 35.0% | |
| ! | AGCCAAACATCCATTTTCTA+GGG | + | chr5.3:17387774-17387793 | MS.gene028013:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.3:17386649-17386668 | MS.gene028013:intron | 35.0% |
| ! | GAAGATTCTTGCATTCCTTT+TGG | - | chr5.3:17387455-17387474 | None:intergenic | 35.0% |
| ! | GAGTGAAAAGAGAGTGTATT+TGG | - | chr5.3:17385736-17385755 | None:intergenic | 35.0% |
| ! | GATGTTTCTGCTTTAAGTAG+TGG | + | chr5.3:17388506-17388525 | MS.gene028013:intron | 35.0% |
| ! | GCAAGAATCTTCTGGAAAAT+GGG | + | chr5.3:17387463-17387482 | MS.gene028013:CDS | 35.0% |
| ! | GTGACGATTTTGTTGATGTT+AGG | + | chr5.3:17385853-17385872 | MS.gene028013:intron | 35.0% |
| ! | GTGTTGGGGTATTTAGAATT+AGG | + | chr5.3:17386039-17386058 | MS.gene028013:intron | 35.0% |
| ! | TAGCCAAACATCCATTTTCT+AGG | + | chr5.3:17387773-17387792 | MS.gene028013:intron | 35.0% |
| ! | TGAGGGTATAATTGATCAAG+TGG | + | chr5.3:17389906-17389925 | MS.gene028013:CDS | 35.0% |
| ! | TGCAAGAATCTTCTGGAAAA+TGG | + | chr5.3:17387462-17387481 | MS.gene028013:CDS | 35.0% |
| ! | TGTTCATTTTGAACTAGTGC+TGG | - | chr5.3:17388913-17388932 | None:intergenic | 35.0% |
| ! | TTGACGGAGTATTCTTACTT+AGG | + | chr5.3:17387182-17387201 | MS.gene028013:intron | 35.0% |
| !! | AGAAGAATTAGGCTGTTTTC+TGG | + | chr5.3:17389418-17389437 | MS.gene028013:intron | 35.0% |
| !! | ATGGCTCTACTATATTTTGC+AGG | + | chr5.3:17388816-17388835 | MS.gene028013:CDS | 35.0% |
| !! | CAAAAGTGCTCTTCTCTATT+TGG | + | chr5.3:17387593-17387612 | MS.gene028013:CDS | 35.0% |
| !! | GTTGATTTTAGTCTCGAAGT+CGG | - | chr5.3:17387253-17387272 | None:intergenic | 35.0% |
| !! | TTTTGGGAGTTTAGTTGAGA+CGG | + | chr5.3:17385831-17385850 | MS.gene028013:intron | 35.0% |
| !!! | ATGGTGGGTTAAGATTTTAG+CGG | + | chr5.3:17386133-17386152 | MS.gene028013:intron | 35.0% |
| !!! | GAGTGTCTTTATTTTCAACG+AGG | + | chr5.3:17386751-17386770 | MS.gene028013:intron | 35.0% |
| !!! | GGGTTTAGGGTTATTTCTTT+TGG | + | chr5.3:17385946-17385965 | MS.gene028013:intron | 35.0% |
| AAAATCCTTACGGGATCGAT+TGG | + | chr5.3:17389984-17390003 | MS.gene028013:CDS | 40.0% | |
| AAACTCAGCAAATTCCTGAC+GGG | - | chr5.3:17387571-17387590 | None:intergenic | 40.0% | |
| AAGGAAAGTAGATCAGATGG+AGG | + | chr5.3:17386492-17386511 | MS.gene028013:intron | 40.0% | |
| AAGTAGATCAGATGGAGGAT+AGG | + | chr5.3:17386497-17386516 | MS.gene028013:intron | 40.0% | |
| ACCCTGCTTCATTTGTCAAT+CGG | + | chr5.3:17389308-17389327 | MS.gene028013:intron | 40.0% | |
| ACCTAAGCCATTCGACAAAT+GGG | - | chr5.3:17386432-17386451 | None:intergenic | 40.0% | |
| ACCTTGCTCAAGCTTGAATA+AGG | - | chr5.3:17387430-17387449 | None:intergenic | 40.0% | |
| AGACAAGCGAAACAGTATGT+TGG | - | chr5.3:17389645-17389664 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr5.3:17386550-17386569 | MS.gene028013:intron | 40.0% | |
| AGTAGTAAGCTTTCAACTCG+TGG | + | chr5.3:17389235-17389254 | MS.gene028013:intron | 40.0% | |
| AGTCAGATCAAAAGAGGTAG+AGG | + | chr5.3:17386578-17386597 | MS.gene028013:intron | 40.0% | |
| AGTTTCTCCCCTTATCAATC+TGG | + | chr5.3:17387797-17387816 | MS.gene028013:intron | 40.0% | |
| ATAGCCACCATCAATTGAGT+TGG | - | chr5.3:17389058-17389077 | None:intergenic | 40.0% | |
| ATCACATTCTTTGCTTCCGA+TGG | + | chr5.3:17386819-17386838 | MS.gene028013:intron | 40.0% | |
| ATTCCAGGTTCATCTGATTG+AGG | + | chr5.3:17389888-17389907 | MS.gene028013:intron | 40.0% | |
| ATTCTTACTTAGGATCAGGC+TGG | + | chr5.3:17387192-17387211 | MS.gene028013:intron | 40.0% | |
| CAAAATGTGCCAACTTGAGA+AGG | - | chr5.3:17387275-17387294 | None:intergenic | 40.0% | |
| CACAGAAGGTAATAGATGAG+TGG | - | chr5.3:17387050-17387069 | None:intergenic | 40.0% | |
| CAGGACAGAGATATGATATG+TGG | + | chr5.3:17387928-17387947 | MS.gene028013:intron | 40.0% | |
| CGTTAGAAATTGCTCTGGTT+TGG | + | chr5.3:17389688-17389707 | MS.gene028013:intron | 40.0% | |
| CTATTTGGCATACACATCAG+TGG | + | chr5.3:17387608-17387627 | MS.gene028013:CDS | 40.0% | |
| CTCCCTAGAAAATGGATGTT+TGG | - | chr5.3:17387779-17387798 | None:intergenic | 40.0% | |
| GACAGATTAAGAGCCTTCTA+GGG | + | chr5.3:17388776-17388795 | MS.gene028013:intron | 40.0% | |
| GAGACAAAGGGTAACCTAAT+TGG | + | chr5.3:17388361-17388380 | MS.gene028013:intron | 40.0% | |
| GAGGATAGTCAGATCAAAAG+AGG | + | chr5.3:17386572-17386591 | MS.gene028013:intron | 40.0% | |
| GATCAACATTCTGTGTCTGA+TGG | + | chr5.3:17388948-17388967 | MS.gene028013:CDS | 40.0% | |
| GGACAGCATAGAAATCTTTG+TGG | - | chr5.3:17388420-17388439 | None:intergenic | 40.0% | |
| GGGGATAACATCTACAACTT+TGG | + | chr5.3:17388644-17388663 | MS.gene028013:CDS | 40.0% | |
| GGGTATAATTGATCAAGTGG+AGG | + | chr5.3:17389909-17389928 | MS.gene028013:CDS | 40.0% | |
| GTAGTAAGCTTTCAACTCGT+GGG | + | chr5.3:17389236-17389255 | MS.gene028013:intron | 40.0% | |
| GTTTCCGTTAGAAATTGCTC+TGG | + | chr5.3:17389683-17389702 | MS.gene028013:intron | 40.0% | |
| TAATAGCTCGCATACACAGT+TGG | - | chr5.3:17387522-17387541 | None:intergenic | 40.0% | |
| TACCTAAGCCATTCGACAAA+TGG | - | chr5.3:17386433-17386452 | None:intergenic | 40.0% | |
| TCAATATCACAAATCCCGTC+AGG | + | chr5.3:17387554-17387573 | MS.gene028013:CDS | 40.0% | |
| TCACATTCTTTGCTTCCGAT+GGG | + | chr5.3:17386820-17386839 | MS.gene028013:intron | 40.0% | |
| TCGAATGGCTTAGGTAGTTT+GGG | + | chr5.3:17386437-17386456 | MS.gene028013:intron | 40.0% | |
| TCTAACGGAAACCCTGAAAT+AGG | - | chr5.3:17389675-17389694 | None:intergenic | 40.0% | |
| TGTGTATGCGAGCTATTACT+GGG | + | chr5.3:17387524-17387543 | MS.gene028013:CDS | 40.0% | |
| TGTTCAATACCCAGAACTCT+TGG | - | chr5.3:17389961-17389980 | None:intergenic | 40.0% | |
| TTCCAGGTTCATCTGATTGA+GGG | + | chr5.3:17389889-17389908 | MS.gene028013:intron | 40.0% | |
| TTCCTTACTACGGAATCTAC+AGG | - | chr5.3:17386478-17386497 | None:intergenic | 40.0% | |
| TTGGGCATTCCTGAACTTTA+AGG | - | chr5.3:17388216-17388235 | None:intergenic | 40.0% | |
| ! | ATGGGAACTTTTGAGCGAAT+GGG | + | chr5.3:17385926-17385945 | MS.gene028013:intron | 40.0% |
| ! | CTGCCATTGGTTATCTTGAA+GGG | + | chr5.3:17387331-17387350 | MS.gene028013:CDS | 40.0% |
| ! | TGCCATTGGTTATCTTGAAG+GGG | + | chr5.3:17387332-17387351 | MS.gene028013:CDS | 40.0% |
| ! | TTTTTCCCCCATTTGTCGAA+TGG | + | chr5.3:17386422-17386441 | MS.gene028013:intron | 40.0% |
| !! | ACTTTTGAGCGAATGGGTTT+AGG | + | chr5.3:17385932-17385951 | MS.gene028013:intron | 40.0% |
| !! | ATTCAGCAGCGTTGATCTTT+AGG | + | chr5.3:17389373-17389392 | MS.gene028013:intron | 40.0% |
| !! | CTTTTGAGCGAATGGGTTTA+GGG | + | chr5.3:17385933-17385952 | MS.gene028013:intron | 40.0% |
| !!! | GGTTATTTCTTTTGGATCCG+AGG | + | chr5.3:17385954-17385973 | MS.gene028013:intron | 40.0% |
| AAGCTTTCAACTCGTGGGTT+GGG | + | chr5.3:17389241-17389260 | MS.gene028013:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.3:17386553-17386572 | MS.gene028013:intron | 45.0% | |
| AGCCGATTGACAAATGAAGC+AGG | - | chr5.3:17389313-17389332 | None:intergenic | 45.0% | |
| CCTAAGCCATTCGACAAATG+GGG | - | chr5.3:17386431-17386450 | None:intergenic | 45.0% | |
| CGACAGATTAAGAGCCTTCT+AGG | + | chr5.3:17388775-17388794 | MS.gene028013:intron | 45.0% | |
| CGCTCTGCAATAACACTCAA+GGG | - | chr5.3:17389112-17389131 | None:intergenic | 45.0% | |
| CTAAGCCATTCGACAAATGG+GGG | - | chr5.3:17386430-17386449 | None:intergenic | 45.0% | |
| CTGTGTATGCGAGCTATTAC+TGG | + | chr5.3:17387523-17387542 | MS.gene028013:CDS | 45.0% | |
| CTTATCCAACTAAGCGAGGT+CGG | - | chr5.3:17386714-17386733 | None:intergenic | 45.0% | |
| GACCCCTTCAAGATAACCAA+TGG | - | chr5.3:17387337-17387356 | None:intergenic | 45.0% | |
| GACCTGTAGATTCCGTAGTA+AGG | + | chr5.3:17386473-17386492 | MS.gene028013:intron | 45.0% | |
| GAGAACTTCGAAGCGATTCA+AGG | - | chr5.3:17385601-17385620 | None:intergenic | 45.0% | |
| GCAACTAGCAAGCATTAGCA+TGG | - | chr5.3:17389481-17389500 | None:intergenic | 45.0% | |
| GCCGATTGACAAATGAAGCA+GGG | - | chr5.3:17389312-17389331 | None:intergenic | 45.0% | |
| GCTGATGCCATAACTTCTTC+TGG | - | chr5.3:17385667-17385686 | None:intergenic | 45.0% | |
| GGAATAGTTCGATCTTCCGA+AGG | - | chr5.3:17389091-17389110 | None:intergenic | 45.0% | |
| GGGAGAAACTCCCTAGAAAA+TGG | - | chr5.3:17387787-17387806 | None:intergenic | 45.0% | |
| GTCGAATGGCTTAGGTAGTT+TGG | + | chr5.3:17386436-17386455 | MS.gene028013:intron | 45.0% | |
| GTGTTGCATTGCATTCGTGT+TGG | - | chr5.3:17388252-17388271 | None:intergenic | 45.0% | |
| TAAGCTTTCAACTCGTGGGT+TGG | + | chr5.3:17389240-17389259 | MS.gene028013:intron | 45.0% | |
| TACCCTCAATCAGATGAACC+TGG | - | chr5.3:17389894-17389913 | None:intergenic | 45.0% | |
| TAGACAGGCTAAGGATGCAA+TGG | - | chr5.3:17386791-17386810 | None:intergenic | 45.0% | |
| TCGCTCTGCAATAACACTCA+AGG | - | chr5.3:17389113-17389132 | None:intergenic | 45.0% | |
| TCGCTTAGTTGGATAAGGCT+TGG | + | chr5.3:17386717-17386736 | MS.gene028013:intron | 45.0% | |
| TCTCTCTGACTCATTCAAGC+TGG | + | chr5.3:17387635-17387654 | MS.gene028013:CDS | 45.0% | |
| TCTGAGAAAGAAGCTGCCAT+TGG | + | chr5.3:17387318-17387337 | MS.gene028013:CDS | 45.0% | |
| TGTACCATTCACCGAGTTCA+GGG | - | chr5.3:17385625-17385644 | None:intergenic | 45.0% | |
| TTGCTGTGATGGTTTCTCGA+CGG | + | chr5.3:17387292-17387311 | MS.gene028013:CDS | 45.0% | |
| TTGTACCATTCACCGAGTTC+AGG | - | chr5.3:17385626-17385645 | None:intergenic | 45.0% | |
| TTGTCCCTTTCTGCTTTGCT+GGG | + | chr5.3:17388623-17388642 | MS.gene028013:CDS | 45.0% | |
| ! | AAGCCTTATCCAACTAAGCG+AGG | - | chr5.3:17386718-17386737 | None:intergenic | 45.0% |
| ! | CTGCTTTAAGTAGTGGTCAG+AGG | + | chr5.3:17388513-17388532 | MS.gene028013:intron | 45.0% |
| ! | GATGGGAACTTTTGAGCGAA+TGG | + | chr5.3:17385925-17385944 | MS.gene028013:intron | 45.0% |
| ! | GCCTTATTCAAGCTTGAGCA+AGG | + | chr5.3:17387426-17387445 | MS.gene028013:CDS | 45.0% |
| ! | GCTGCCATTGGTTATCTTGA+AGG | + | chr5.3:17387330-17387349 | MS.gene028013:CDS | 45.0% |
| ! | GTTGGATAAGGCTTGGTTGT+TGG | + | chr5.3:17386724-17386743 | MS.gene028013:intron | 45.0% |
| !! | GTTGGCACATTTTGCTGTGA+TGG | + | chr5.3:17387281-17387300 | MS.gene028013:CDS | 45.0% |
| !!! | TCTTGCTCTTGCCGTTTTTC+AGG | + | chr5.3:17385709-17385728 | MS.gene028013:CDS | 45.0% |
| AGGAAGCTGGGTAGGGTTTA+GGG | + | chr5.3:17385974-17385993 | MS.gene028013:intron | 50.0% | |
| AGGGCACAGTACATGTTTCC+TGG | + | chr5.3:17389929-17389948 | MS.gene028013:CDS | 50.0% | |
| ATCCCCCAGCAAAGCAGAAA+GGG | - | chr5.3:17388630-17388649 | None:intergenic | 50.0% | |
| CCCCATTTGTCGAATGGCTT+AGG | + | chr5.3:17386428-17386447 | MS.gene028013:intron | 50.0% | |
| CGAAGTTCTCACCCTGAACT+CGG | + | chr5.3:17385611-17385630 | MS.gene028013:CDS | 50.0% | |
| CGACCTCGCTTAGTTGGATA+AGG | + | chr5.3:17386712-17386731 | MS.gene028013:intron | 50.0% | |
| CTTGTCCCTTTCTGCTTTGC+TGG | + | chr5.3:17388622-17388641 | MS.gene028013:CDS | 50.0% | |
| GCTTGAGCAAGGTGACCAAA+AGG | + | chr5.3:17387437-17387456 | MS.gene028013:CDS | 50.0% | |
| GGGCACAGTACATGTTTCCT+GGG | + | chr5.3:17389930-17389949 | MS.gene028013:CDS | 50.0% | |
| TAAACCCTACCCAGCTTCCT+CGG | - | chr5.3:17385974-17385993 | None:intergenic | 50.0% | |
| TAGTTCGATCTTCCGAAGGC+CGG | - | chr5.3:17389087-17389106 | None:intergenic | 50.0% | |
| TATCCCCCAGCAAAGCAGAA+AGG | - | chr5.3:17388631-17388650 | None:intergenic | 50.0% | |
| TCCTTACGGGATCGATTGGA+CGG | + | chr5.3:17389988-17390007 | MS.gene028013:CDS | 50.0% | |
| TCGTGCGTCCTAGGTCTTAA+TGG | + | chr5.3:17388290-17388309 | MS.gene028013:intron | 50.0% | |
| TGGGTGCAACCAAGAGTTCT+GGG | + | chr5.3:17389949-17389968 | MS.gene028013:CDS | 50.0% | |
| TGTCCCTTTCTGCTTTGCTG+GGG | + | chr5.3:17388624-17388643 | MS.gene028013:CDS | 50.0% | |
| TGTTTGGGGAGGGATGTGAA+TGG | + | chr5.3:17386114-17386133 | MS.gene028013:intron | 50.0% | |
| TTCTATGCGCTGCTCTCTAG+TGG | - | chr5.3:17387376-17387395 | None:intergenic | 50.0% | |
| ! | ATCAGGTGTTTCTGCCTCGA+TGG | - | chr5.3:17390046-17390065 | None:intergenic | 50.0% |
| ! | CTTTTGGATCCGAGGAAGCT+GGG | + | chr5.3:17385962-17385981 | MS.gene028013:intron | 50.0% |
| ! | TCTTTTGGATCCGAGGAAGC+TGG | + | chr5.3:17385961-17385980 | MS.gene028013:intron | 50.0% |
| ! | TTGGACCGGAAAAGTACACG+CGG | + | chr5.3:17390011-17390030 | MS.gene028013:CDS | 50.0% |
| !! | AGCCATTCCACTTTTGACCC+TGG | - | chr5.3:17388802-17388821 | None:intergenic | 50.0% |
| !! | ATTAAGAGCCTTCTAGGGCC+AGG | + | chr5.3:17388781-17388800 | MS.gene028013:CDS | 50.0% |
| !! | TGATGGTGGCTATTTGCAGC+CGG | + | chr5.3:17389065-17389084 | MS.gene028013:intron | 50.0% |
| !! | TTAAGAGCCTTCTAGGGCCA+GGG | + | chr5.3:17388782-17388801 | MS.gene028013:CDS | 50.0% |
| ACCGTCCAATCGATCCCGTA+AGG | - | chr5.3:17389992-17390011 | None:intergenic | 55.0% | |
| ACTAAGCGAGGTCGGCTACA+TGG | - | chr5.3:17386706-17386725 | None:intergenic | 55.0% | |
| CAGAACTCTTGGTTGCACCC+AGG | - | chr5.3:17389950-17389969 | None:intergenic | 55.0% | |
| CTGGGTGCAACCAAGAGTTC+TGG | + | chr5.3:17389948-17389967 | MS.gene028013:CDS | 55.0% | |
| GAGGAAGCTGGGTAGGGTTT+AGG | + | chr5.3:17385973-17385992 | MS.gene028013:intron | 55.0% | |
| GATCGATTGGACGGTTGGAC+CGG | + | chr5.3:17389997-17390016 | MS.gene028013:CDS | 55.0% | |
| GGCCAGGGTCAAAAGTGGAA+TGG | + | chr5.3:17388797-17388816 | MS.gene028013:CDS | 55.0% | |
| GTCCCTTTCTGCTTTGCTGG+GGG | + | chr5.3:17388625-17388644 | MS.gene028013:CDS | 55.0% | |
| TACGGGATCGATTGGACGGT+TGG | + | chr5.3:17389992-17390011 | MS.gene028013:CDS | 55.0% | |
| TGGGGAGGGATGTGAATGGT+GGG | + | chr5.3:17386118-17386137 | MS.gene028013:intron | 55.0% | |
| TGTAGCCGACCTCGCTTAGT+TGG | + | chr5.3:17386706-17386725 | MS.gene028013:intron | 55.0% | |
| TTGAGCTGTTCGTGCGTCCT+AGG | + | chr5.3:17388281-17388300 | MS.gene028013:intron | 55.0% | |
| TTGGGGAGGGATGTGAATGG+TGG | + | chr5.3:17386117-17386136 | MS.gene028013:intron | 55.0% | |
| ! | CAACGCCGCGTGTACTTTTC+CGG | - | chr5.3:17390019-17390038 | None:intergenic | 55.0% |
| ! | CTCACCCTGAACTCGGTGAA+TGG | + | chr5.3:17385618-17385637 | MS.gene028013:CDS | 55.0% |
| ! | CTTTTGACCCTGGCCCTAGA+AGG | - | chr5.3:17388792-17388811 | None:intergenic | 55.0% |
| ! | TCTAGGGCCAGGGTCAAAAG+TGG | + | chr5.3:17388792-17388811 | MS.gene028013:CDS | 55.0% |
| GGATCCGAGGAAGCTGGGTA+GGG | + | chr5.3:17385967-17385986 | MS.gene028013:intron | 60.0% | |
| GGCTATTTGCAGCCGGCCTT+CGG | + | chr5.3:17389072-17389091 | MS.gene028013:intron | 60.0% | |
| TGGATCCGAGGAAGCTGGGT+AGG | + | chr5.3:17385966-17385985 | MS.gene028013:intron | 60.0% | |
| CGCGGCGTTGTTGTCCATCG+AGG | + | chr5.3:17390029-17390048 | MS.gene028013:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 17385581 | 17390080 | 17385581 | ID=MS.gene028013 |
| chr5.3 | mRNA | 17385581 | 17390080 | 17385581 | ID=MS.gene028013.t1;Parent=MS.gene028013 |
| chr5.3 | exon | 17385581 | 17385730 | 17385581 | ID=MS.gene028013.t1.exon1;Parent=MS.gene028013.t1 |
| chr5.3 | CDS | 17385581 | 17385730 | 17385581 | ID=cds.MS.gene028013.t1;Parent=MS.gene028013.t1 |
| chr5.3 | exon | 17387210 | 17387656 | 17387210 | ID=MS.gene028013.t1.exon2;Parent=MS.gene028013.t1 |
| chr5.3 | CDS | 17387210 | 17387656 | 17387210 | ID=cds.MS.gene028013.t1;Parent=MS.gene028013.t1 |
| chr5.3 | exon | 17388608 | 17388688 | 17388608 | ID=MS.gene028013.t1.exon3;Parent=MS.gene028013.t1 |
| chr5.3 | CDS | 17388608 | 17388688 | 17388608 | ID=cds.MS.gene028013.t1;Parent=MS.gene028013.t1 |
| chr5.3 | exon | 17388781 | 17388983 | 17388781 | ID=MS.gene028013.t1.exon4;Parent=MS.gene028013.t1 |
| chr5.3 | CDS | 17388781 | 17388983 | 17388781 | ID=cds.MS.gene028013.t1;Parent=MS.gene028013.t1 |
| chr5.3 | exon | 17389084 | 17389183 | 17389084 | ID=MS.gene028013.t1.exon5;Parent=MS.gene028013.t1 |
| chr5.3 | CDS | 17389084 | 17389183 | 17389084 | ID=cds.MS.gene028013.t1;Parent=MS.gene028013.t1 |
| chr5.3 | exon | 17389895 | 17390080 | 17389895 | ID=MS.gene028013.t1.exon6;Parent=MS.gene028013.t1 |
| chr5.3 | CDS | 17389895 | 17390080 | 17389895 | ID=cds.MS.gene028013.t1;Parent=MS.gene028013.t1 |
| Gene Sequence |
| Protein sequence |
