Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72902.t1 | XP_003612702.1 | 98.2 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 2.90E-209 | 737.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72902.t1 | Q8GYA6 | 83.2 | 388 | 63 | 1 | 1 | 388 | 1 | 386 | 2.1e-184 | 646.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72902.t1 | G7K9K1 | 98.2 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 2.1e-209 | 737.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene72902 | 0.806307 | 8.77E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene72902 | 0.80179 | 7.62E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene72902 | 0.823307 | 1.49E-53 | -1.69E-46 |
| MS.gene054413 | MS.gene72902 | 0.801784 | 7.65E-49 | -1.69E-46 |
| MS.gene056632 | MS.gene72902 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene057144 | MS.gene72902 | 0.806298 | 8.80E-50 | -1.69E-46 |
| MS.gene057145 | MS.gene72902 | 0.810194 | 1.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062770 | MS.gene72902 | PPI |
| MS.gene58134 | MS.gene72902 | PPI |
| MS.gene72902 | MS.gene29607 | PPI |
| MS.gene72902 | MS.gene24375 | PPI |
| MS.gene008081 | MS.gene72902 | PPI |
| MS.gene72902 | MS.gene58136 | PPI |
| MS.gene72902 | MS.gene031999 | PPI |
| MS.gene72902 | MS.gene98447 | PPI |
| MS.gene044013 | MS.gene72902 | PPI |
| MS.gene72902 | MS.gene030686 | PPI |
| MS.gene72902 | MS.gene002648 | PPI |
| MS.gene72902 | MS.gene69251 | PPI |
| MS.gene67099 | MS.gene72902 | PPI |
| MS.gene28454 | MS.gene72902 | PPI |
| MS.gene72902 | MS.gene80661 | PPI |
| MS.gene72902 | MS.gene70283 | PPI |
| MS.gene72902 | MS.gene70282 | PPI |
| MS.gene72902 | MS.gene004328 | PPI |
| MS.gene72902 | MS.gene057320 | PPI |
| MS.gene72902 | MS.gene56675 | PPI |
| MS.gene72902 | MS.gene69716 | PPI |
| MS.gene72902 | MS.gene72901 | PPI |
| MS.gene72902 | MS.gene80790 | PPI |
| MS.gene72902 | MS.gene28183 | PPI |
| MS.gene72902 | MS.gene028013 | PPI |
| MS.gene72902 | MS.gene030685 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72902.t1 | MTR_5g027960 | 98.196 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 0.0 | 772 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72902.t1 | AT4G19006 | 83.247 | 388 | 63 | 1 | 1 | 388 | 1 | 386 | 0.0 | 673 |
| MS.gene72902.t1 | AT5G45620 | 82.732 | 388 | 65 | 1 | 1 | 388 | 1 | 386 | 0.0 | 671 |
| MS.gene72902.t1 | AT4G19006 | 73.243 | 441 | 63 | 2 | 1 | 388 | 1 | 439 | 0.0 | 649 |
| MS.gene72902.t1 | AT5G45620 | 84.259 | 324 | 49 | 1 | 1 | 324 | 1 | 322 | 0.0 | 567 |
Find 84 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGTGCTCTTCTCTATT+TGG | 0.148267 | 5.1:+18959284 | MS.gene72902:CDS |
| TGCAAGAATCTTCTGGAAAA+TGG | 0.170541 | 5.1:+18959153 | MS.gene72902:CDS |
| CGACAGATTAAGAGCCTTCT+AGG | 0.205081 | 5.1:+18960459 | MS.gene72902:intron |
| GCAGAAACACCTGATTTAAT+TGG | 0.231748 | 5.1:+18961736 | MS.gene72902:CDS |
| CTTGTCCCTTTCTGCTCTGC+TGG | 0.238406 | 5.1:+18960306 | MS.gene72902:CDS |
| GGCATTTAATTCTGGTGATT+TGG | 0.264559 | 5.1:+18960521 | MS.gene72902:CDS |
| CTGTGTATGCGAGCTATTAC+TGG | 0.301939 | 5.1:+18959214 | MS.gene72902:CDS |
| CTGGGTGCAACCAAGAGTTC+TGG | 0.325908 | 5.1:+18961633 | MS.gene72902:CDS |
| GAAGATTCTTGCATTCCTTT+TGG | 0.328435 | 5.1:-18959143 | None:intergenic |
| AGGGCACAGTACATGTTTCC+TGG | 0.330946 | 5.1:+18961614 | MS.gene72902:CDS |
| TTGTACCATTCACCGAGTTC+AGG | 0.331765 | 5.1:-18957317 | None:intergenic |
| ACCTTGCTCAAGCTTGAATA+AGG | 0.333906 | 5.1:-18959118 | None:intergenic |
| AAAGGAATGCAAGAATCTTC+TGG | 0.334571 | 5.1:+18959146 | MS.gene72902:CDS |
| CAATTTGCATCTTAATGTAT+AGG | 0.364510 | 5.1:-18959095 | None:intergenic |
| GCTGATGCCATAACTTCTTC+TGG | 0.398801 | 5.1:-18957358 | None:intergenic |
| TTGTCCCTTTCTGCTCTGCT+GGG | 0.405367 | 5.1:+18960307 | MS.gene72902:CDS |
| GCAAGAATCTTCTGGAAAAT+GGG | 0.416747 | 5.1:+18959154 | MS.gene72902:CDS |
| GATTATTTGCAGCCGGCCTT+CGG | 0.425648 | 5.1:+18960756 | MS.gene72902:intron |
| GGGGATAACATCTACAACTT+TGG | 0.433711 | 5.1:+18960328 | MS.gene72902:CDS |
| GTCTGATGGAAATTATATTC+AGG | 0.441429 | 5.1:+18960646 | MS.gene72902:CDS |
| TGAACAGATAAAATCCTTAC+GGG | 0.442242 | 5.1:+18961660 | MS.gene72902:CDS |
| ATTCACGATCCAATTAAATC+AGG | 0.446172 | 5.1:-18961745 | None:intergenic |
| TTCCAGGTTCATCTGATTGA+GGG | 0.450314 | 5.1:+18961574 | MS.gene72902:intron |
| TTGAACAGATAAAATCCTTA+CGG | 0.468324 | 5.1:+18961659 | MS.gene72902:CDS |
| TGTTCAATACCCAGAACTCT+TGG | 0.469920 | 5.1:-18961643 | None:intergenic |
| TGGGTGCAACCAAGAGTTCT+GGG | 0.471407 | 5.1:+18961634 | MS.gene72902:CDS |
| ATTCCAGGTTCATCTGATTG+AGG | 0.471689 | 5.1:+18961573 | MS.gene72902:intron |
| GCTGCCATTGGTTATCTTGA+AGG | 0.473495 | 5.1:+18959021 | MS.gene72902:CDS |
| AAAATCCTTACGGGATCGAT+TGG | 0.484091 | 5.1:+18961669 | MS.gene72902:CDS |
| ATTAAGAGCCTTCTAGGGCC+AGG | 0.485594 | 5.1:+18960465 | MS.gene72902:CDS |
| CTGCCATTGGTTATCTTGAA+GGG | 0.488971 | 5.1:+18959022 | MS.gene72902:CDS |
| TACGGGATCGATTGGACGGT+TGG | 0.490235 | 5.1:+18961677 | MS.gene72902:CDS |
| TGTACCATTCACCGAGTTCA+GGG | 0.493012 | 5.1:-18957316 | None:intergenic |
| ATCTGTACCAGAAGAAGTTA+TGG | 0.497476 | 5.1:+18957351 | MS.gene72902:CDS |
| CTCACCCTGAACTCGGTGAA+TGG | 0.501156 | 5.1:+18957312 | MS.gene72902:CDS |
| ATCAGGTGTTTCTGCCTCGA+TGG | 0.508687 | 5.1:-18961728 | None:intergenic |
| GATCAACATTCTGTGTCTGA+TGG | 0.511761 | 5.1:+18960632 | MS.gene72902:CDS |
| TCAATATCACAAATCCCGTC+AGG | 0.511791 | 5.1:+18959245 | MS.gene72902:CDS |
| TGTCCCTTTCTGCTCTGCTG+GGG | 0.512089 | 5.1:+18960308 | MS.gene72902:CDS |
| GCTTGAGCAAGGTGACCAAA+AGG | 0.513089 | 5.1:+18959128 | MS.gene72902:CDS |
| GATCGATTGGACGGTTGGAC+CGG | 0.514901 | 5.1:+18961682 | MS.gene72902:CDS |
| TGTAAATACTCACAATAGGA+TGG | 0.517964 | 5.1:-18960363 | None:intergenic |
| GTCCCTTTCTGCTCTGCTGG+GGG | 0.520589 | 5.1:+18960309 | MS.gene72902:CDS |
| TTACAGATAGGCTCTTCATA+AGG | 0.525497 | 5.1:-18960849 | None:intergenic |
| TAAAATCAACCTTCTCAAGT+TGG | 0.525894 | 5.1:+18958954 | MS.gene72902:CDS |
| GCCTTATTCAAGCTTGAGCA+AGG | 0.527580 | 5.1:+18959117 | MS.gene72902:CDS |
| GAGAACTTCGAAGCGATTCA+AGG | 0.528592 | 5.1:-18957292 | None:intergenic |
| TCAAAATGAACAGAAGCTGT+TGG | 0.529532 | 5.1:+18960605 | MS.gene72902:CDS |
| GGGCACAGTACATGTTTCCT+GGG | 0.529779 | 5.1:+18961615 | MS.gene72902:CDS |
| CGAAGTTCTCACCCTGAACT+CGG | 0.534607 | 5.1:+18957305 | MS.gene72902:CDS |
| TCGATATCAAGAATTATGTC+AGG | 0.541395 | 5.1:+18960545 | MS.gene72902:CDS |
| TAGTTCGATCTTCCGAAGGC+CGG | 0.546687 | 5.1:-18960768 | None:intergenic |
| CGCTCTGCAATAACACTCAA+GGG | 0.547253 | 5.1:-18960793 | None:intergenic |
| TTCTATGCGCTGCTCTCTAG+TGG | 0.551669 | 5.1:-18959064 | None:intergenic |
| TCTGAGAAAGAAGCTGCCAT+TGG | 0.552784 | 5.1:+18959009 | MS.gene72902:CDS |
| AAAACTTTCTATAGAGAATG+TGG | 0.554790 | 5.1:+18960819 | MS.gene72902:CDS |
| AAGGTATTGCAGTGCAGCCA+TGG | 0.555178 | 5.1:-18957273 | None:intergenic |
| TGAGGGTATAATTGATCAAG+TGG | 0.558787 | 5.1:+18961591 | MS.gene72902:CDS |
| CAAAATGTGCCAACTTGAGA+AGG | 0.559547 | 5.1:-18958963 | None:intergenic |
| GACAGATTAAGAGCCTTCTA+GGG | 0.563638 | 5.1:+18960460 | MS.gene72902:intron |
| TTAAGAGCCTTCTAGGGCCA+GGG | 0.569610 | 5.1:+18960466 | MS.gene72902:CDS |
| TCTAGGGCCAGGGTCAAAAG+TGG | 0.575982 | 5.1:+18960476 | MS.gene72902:CDS |
| ACCGTCCAATCGATCCCGTA+AGG | 0.577387 | 5.1:-18961674 | None:intergenic |
| GTAAATACTCACAATAGGAT+GGG | 0.577630 | 5.1:-18960362 | None:intergenic |
| TTGCTGTGATGGTTTCTCGA+CGG | 0.578421 | 5.1:+18958983 | MS.gene72902:CDS |
| TCGCTCTGCAATAACACTCA+AGG | 0.579629 | 5.1:-18960794 | None:intergenic |
| TGCATCTTAATGTATAGGAT+AGG | 0.580855 | 5.1:-18959090 | None:intergenic |
| TCTCTCTGACTCATTCAAGC+TGG | 0.583254 | 5.1:+18959326 | MS.gene72902:CDS |
| TCCTTACGGGATCGATTGGA+CGG | 0.584260 | 5.1:+18961673 | MS.gene72902:CDS |
| AAACTCAGCAAATTCCTGAC+GGG | 0.585720 | 5.1:-18959259 | None:intergenic |
| TGCCATTGGTTATCTTGAAG+GGG | 0.587336 | 5.1:+18959023 | MS.gene72902:CDS |
| TAATAGCTCGCATACACAGT+TGG | 0.595991 | 5.1:-18959210 | None:intergenic |
| CTATTTGGCATACACATCAG+TGG | 0.599964 | 5.1:+18959299 | MS.gene72902:CDS |
| GGCCAGGGTCAAAAGTGGAA+TGG | 0.600287 | 5.1:+18960481 | MS.gene72902:CDS |
| TGTGTATGCGAGCTATTACT+GGG | 0.603316 | 5.1:+18959215 | MS.gene72902:CDS |
| GACCCCTTCAAGATAACCAA+TGG | 0.621964 | 5.1:-18959025 | None:intergenic |
| AAAACTCAGCAAATTCCTGA+CGG | 0.624927 | 5.1:-18959260 | None:intergenic |
| GGTATAATTGATCAAGTGGA+GGG | 0.641521 | 5.1:+18961595 | MS.gene72902:CDS |
| GGAATAGTTCGATCTTCCGA+AGG | 0.642595 | 5.1:-18960772 | None:intergenic |
| GGGTATAATTGATCAAGTGG+AGG | 0.645121 | 5.1:+18961594 | MS.gene72902:CDS |
| CGCGGCGTTGTTGTCCATCG+AGG | 0.648030 | 5.1:+18961714 | MS.gene72902:CDS |
| TGAATGGTACAATTCTCTTG+CGG | 0.666797 | 5.1:+18957328 | MS.gene72902:CDS |
| CAGAACTCTTGGTTGCACCC+AGG | 0.676624 | 5.1:-18961632 | None:intergenic |
| TTGGACCGGAAAAGTACACG+CGG | 0.778962 | 5.1:+18961696 | MS.gene72902:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CACTTTTTATTATATTATTA+TGG | + | chr5.1:18957932-18957951 | MS.gene72902:intron | 10.0% |
| !! | ACTAAAATCAAATGAAAATT+TGG | - | chr5.1:18958654-18958673 | None:intergenic | 15.0% |
| !! | AGTAACAAAAATTAAACTAT+TGG | - | chr5.1:18957462-18957481 | None:intergenic | 15.0% |
| !! | ATAATTATGAAAAACCAATT+AGG | - | chr5.1:18960062-18960081 | None:intergenic | 15.0% |
| !! | CGATATATAAATTCAAAAAA+GGG | + | chr5.1:18959850-18959869 | MS.gene72902:intron | 15.0% |
| !! | GGAATAAATTTATTCATATA+AGG | - | chr5.1:18961558-18961577 | None:intergenic | 15.0% |
| !! | GTGTATTAATTTAATAAGTA+AGG | - | chr5.1:18960125-18960144 | None:intergenic | 15.0% |
| !! | GTTTATAATTATTTGTTTGA+CGG | + | chr5.1:18958857-18958876 | MS.gene72902:intron | 15.0% |
| !! | TACTTATTAAATTAATACAC+AGG | + | chr5.1:18960125-18960144 | MS.gene72902:intron | 15.0% |
| !! | TATATGAATAAATTTATTCC+AGG | + | chr5.1:18961558-18961577 | MS.gene72902:intron | 15.0% |
| !!! | ATTTTCATTTGATTTTAGTT+CGG | + | chr5.1:18958655-18958674 | MS.gene72902:intron | 15.0% |
| !!! | CCTTTTTTGAATTTATATAT+CGG | - | chr5.1:18959852-18959871 | None:intergenic | 15.0% |
| !!! | CTATTTTGTTTTGTTTTTTA+GGG | + | chr5.1:18957574-18957593 | MS.gene72902:intron | 15.0% |
| !!! | GTTATGTTTTTATTGAAAAT+TGG | + | chr5.1:18960161-18960180 | MS.gene72902:intron | 15.0% |
| !!! | TCTATTTTGTTTTGTTTTTT+AGG | + | chr5.1:18957573-18957592 | MS.gene72902:intron | 15.0% |
| !!! | TGCTTTTATTTTTTGTATTT+TGG | + | chr5.1:18961226-18961245 | MS.gene72902:intron | 15.0% |
| !!! | TTGTATATGAAATTGAATTT+TGG | + | chr5.1:18957706-18957725 | MS.gene72902:intron | 15.0% |
| !! | AATGTATAAGAGAAACTATT+AGG | + | chr5.1:18958303-18958322 | MS.gene72902:intron | 20.0% |
| !! | ATGTGATAAAAATATTAGAC+AGG | - | chr5.1:18958497-18958516 | None:intergenic | 20.0% |
| !! | ATTAGAAGAAATAAGAAACA+GGG | - | chr5.1:18958778-18958797 | None:intergenic | 20.0% |
| !! | CAAAATTTCAACATTAACAA+TGG | - | chr5.1:18961302-18961321 | None:intergenic | 20.0% |
| !! | CATTTATAAAAAGATTGCAA+GGG | - | chr5.1:18958058-18958077 | None:intergenic | 20.0% |
| !! | CCGATATATAAATTCAAAAA+AGG | + | chr5.1:18959849-18959868 | MS.gene72902:intron | 20.0% |
| !! | TAATCTACTAAAGAATCTAA+AGG | - | chr5.1:18958218-18958237 | None:intergenic | 20.0% |
| !! | TATTAGAAGAAATAAGAAAC+AGG | - | chr5.1:18958779-18958798 | None:intergenic | 20.0% |
| !! | TTTGCGGTTTATTAAAATTA+GGG | + | chr5.1:18957492-18957511 | MS.gene72902:intron | 20.0% |
| !!! | CAAATTTTGCTATTCAAATT+TGG | + | chr5.1:18961198-18961217 | MS.gene72902:intron | 20.0% |
| !!! | CATTGTTAATGTTGAAATTT+TGG | + | chr5.1:18961300-18961319 | MS.gene72902:intron | 20.0% |
| !!! | GCAAACTTCTTTTTTTAAAA+TGG | - | chr5.1:18961489-18961508 | None:intergenic | 20.0% |
| !!! | GTTACTTAGTTTTAATTTTG+CGG | + | chr5.1:18957476-18957495 | MS.gene72902:intron | 20.0% |
| !!! | GTTTCTCTTATACATTTTAT+AGG | - | chr5.1:18958299-18958318 | None:intergenic | 20.0% |
| !!! | TATTATTATGGTTTGAGATA+TGG | + | chr5.1:18957944-18957963 | MS.gene72902:intron | 20.0% |
| !!! | TTGGATTTGTATTTTTGTTT+GGG | + | chr5.1:18957790-18957809 | MS.gene72902:intron | 20.0% |
| !!! | TTTGGATTTGTATTTTTGTT+TGG | + | chr5.1:18957789-18957808 | MS.gene72902:intron | 20.0% |
| !!! | TTTTGCGGTTTATTAAAATT+AGG | + | chr5.1:18957491-18957510 | MS.gene72902:intron | 20.0% |
| !!! | TTTTGGGTTTTTTTTTGTTT+TGG | + | chr5.1:18957771-18957790 | MS.gene72902:intron | 20.0% |
| !!! | TTTTTTAAATGCTTCTTATC+TGG | + | chr5.1:18960392-18960411 | MS.gene72902:intron | 20.0% |
| ! | AAAACTTTCTATAGAGAATG+TGG | + | chr5.1:18960819-18960838 | MS.gene72902:CDS | 25.0% |
| ! | AACTAATTCAAAAGTAGTTC+TGG | - | chr5.1:18959707-18959726 | None:intergenic | 25.0% |
| ! | AATACACAGGACTTATAATA+AGG | + | chr5.1:18960138-18960157 | MS.gene72902:intron | 25.0% |
| ! | AATCAAATGAAAATTTGGAC+TGG | - | chr5.1:18958649-18958668 | None:intergenic | 25.0% |
| ! | AATTAGGGTTTCTGTTAATT+TGG | + | chr5.1:18957507-18957526 | MS.gene72902:intron | 25.0% |
| ! | AATTATCACACTAAAAGTCA+TGG | - | chr5.1:18958810-18958829 | None:intergenic | 25.0% |
| ! | ACTAATTCAAAAGTAGTTCT+GGG | - | chr5.1:18959706-18959725 | None:intergenic | 25.0% |
| ! | ACTTCACAAACAAAACAAAA+AGG | - | chr5.1:18961511-18961530 | None:intergenic | 25.0% |
| ! | ATAAAATCCAGATTGATAAG+GGG | - | chr5.1:18959498-18959517 | None:intergenic | 25.0% |
| ! | ATACACAGGACTTATAATAA+GGG | + | chr5.1:18960139-18960158 | MS.gene72902:intron | 25.0% |
| ! | ATATTAGTTAATGCAGGATT+TGG | + | chr5.1:18960276-18960295 | MS.gene72902:intron | 25.0% |
| ! | ATCCTTAATTATGAACATCT+AGG | - | chr5.1:18961420-18961439 | None:intergenic | 25.0% |
| ! | ATGATGTAAATACTCACAAT+AGG | - | chr5.1:18960370-18960389 | None:intergenic | 25.0% |
| ! | ATTAGGGTTTCTGTTAATTT+GGG | + | chr5.1:18957508-18957527 | MS.gene72902:intron | 25.0% |
| ! | ATTTCAACATTAACAATGGA+AGG | - | chr5.1:18961298-18961317 | None:intergenic | 25.0% |
| ! | CAATTTGCATCTTAATGTAT+AGG | - | chr5.1:18959098-18959117 | None:intergenic | 25.0% |
| ! | CATAAAATCCAGATTGATAA+GGG | - | chr5.1:18959499-18959518 | None:intergenic | 25.0% |
| ! | CCATTTATAAAAAGATTGCA+AGG | - | chr5.1:18958059-18958078 | None:intergenic | 25.0% |
| ! | GAAAAAAATCATAGACAAGT+TGG | - | chr5.1:18960238-18960257 | None:intergenic | 25.0% |
| ! | GATATGATATTAGTTAATGC+AGG | + | chr5.1:18960270-18960289 | MS.gene72902:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr5.1:18958356-18958375 | None:intergenic | 25.0% |
| ! | TAAAAATATTAGACAGGCTA+AGG | - | chr5.1:18958491-18958510 | None:intergenic | 25.0% |
| ! | TAACAATGGAAGGTAAAAAA+AGG | - | chr5.1:18961288-18961307 | None:intergenic | 25.0% |
| ! | TACCTAGATGTTCATAATTA+AGG | + | chr5.1:18961415-18961434 | MS.gene72902:intron | 25.0% |
| ! | TAGCAAAATTTGTCATTAGA+TGG | - | chr5.1:18961190-18961209 | None:intergenic | 25.0% |
| ! | TCATAAAATCCAGATTGATA+AGG | - | chr5.1:18959500-18959519 | None:intergenic | 25.0% |
| ! | TCTAAACATAGATTGAACAA+TGG | - | chr5.1:18958580-18958599 | None:intergenic | 25.0% |
| ! | TCTTTACATCATAGAAACTT+AGG | + | chr5.1:18959526-18959545 | MS.gene72902:intron | 25.0% |
| ! | TGATCAAGTGTATCATAAAT+TGG | + | chr5.1:18958085-18958104 | MS.gene72902:intron | 25.0% |
| ! | TTAACTAATATCATATCTGC+TGG | - | chr5.1:18960267-18960286 | None:intergenic | 25.0% |
| ! | TTGAACAGATAAAATCCTTA+CGG | + | chr5.1:18961659-18961678 | MS.gene72902:CDS | 25.0% |
| ! | TTTATTTCCAACTCAATTGA+TGG | + | chr5.1:18960732-18960751 | MS.gene72902:intron | 25.0% |
| !! | AAATTGAATTTTGGATGTTG+GGG | + | chr5.1:18957715-18957734 | MS.gene72902:intron | 25.0% |
| !! | ATCAATCTGGATTTTATGAT+TGG | + | chr5.1:18959501-18959520 | MS.gene72902:intron | 25.0% |
| !! | CCTTGCAATCTTTTTATAAA+TGG | + | chr5.1:18958056-18958075 | MS.gene72902:intron | 25.0% |
| !! | GAAATTGAATTTTGGATGTT+GGG | + | chr5.1:18957714-18957733 | MS.gene72902:intron | 25.0% |
| !! | TCAATCTGGATTTTATGATT+GGG | + | chr5.1:18959502-18959521 | MS.gene72902:intron | 25.0% |
| !! | TGAAATTGAATTTTGGATGT+TGG | + | chr5.1:18957713-18957732 | MS.gene72902:intron | 25.0% |
| !! | TTGTTGGAAACTGAAATTTT+GGG | + | chr5.1:18957755-18957774 | MS.gene72902:intron | 25.0% |
| !! | TTTGTTGGAAACTGAAATTT+TGG | + | chr5.1:18957754-18957773 | MS.gene72902:intron | 25.0% |
| !!! | AACTTTAAGGTACTTTCTAA+TGG | - | chr5.1:18959887-18959906 | None:intergenic | 25.0% |
| !!! | ATTTAGAATTAGGGTTTTGT+TGG | + | chr5.1:18957739-18957758 | MS.gene72902:intron | 25.0% |
| !!! | TGGATTTGTATTTTTGTTTG+GGG | + | chr5.1:18957791-18957810 | MS.gene72902:intron | 25.0% |
| !!! | TTTGTTTTTTAGGGTTTGAT+TGG | + | chr5.1:18957583-18957602 | MS.gene72902:intron | 25.0% |
| !!! | TTTTGTTTTGTTTGTGAAGT+TGG | + | chr5.1:18961511-18961530 | MS.gene72902:intron | 25.0% |
| AGATTTAGAGATCAATGAGT+TGG | + | chr5.1:18958328-18958347 | MS.gene72902:intron | 30.0% | |
| AGCCAAAATATCTACATCTT+TGG | - | chr5.1:18958019-18958038 | None:intergenic | 30.0% | |
| ATAAGAAACAGGGATATCAA+TGG | - | chr5.1:18958768-18958787 | None:intergenic | 30.0% | |
| ATAATCACCATCAATTGAGT+TGG | - | chr5.1:18960742-18960761 | None:intergenic | 30.0% | |
| ATATAGTAGTTATGCAACAC+AGG | + | chr5.1:18959601-18959620 | MS.gene72902:intron | 30.0% | |
| ATGTTATCACCAGAAGAATT+AGG | + | chr5.1:18961091-18961110 | MS.gene72902:intron | 30.0% | |
| ATTGGAATTGTGGTAAAGAT+CGG | + | chr5.1:18957601-18957620 | MS.gene72902:intron | 30.0% | |
| CAGAAGAATCAACTTAGTTT+AGG | - | chr5.1:18961133-18961152 | None:intergenic | 30.0% | |
| CATGCTCTTATGTTAATGTA+AGG | - | chr5.1:18959434-18959453 | None:intergenic | 30.0% | |
| CTTTAGTAGATTATGCAGTA+AGG | + | chr5.1:18958225-18958244 | MS.gene72902:intron | 30.0% | |
| GTAAATACTCACAATAGGAT+GGG | - | chr5.1:18960365-18960384 | None:intergenic | 30.0% | |
| GTCTGATGGAAATTATATTC+AGG | + | chr5.1:18960646-18960665 | MS.gene72902:CDS | 30.0% | |
| TAAAATCAACCTTCTCAAGT+TGG | + | chr5.1:18958954-18958973 | MS.gene72902:CDS | 30.0% | |
| TCGATATCAAGAATTATGTC+AGG | + | chr5.1:18960545-18960564 | MS.gene72902:CDS | 30.0% | |
| TGAAAGCTTACTACTTTGTA+TGG | - | chr5.1:18960914-18960933 | None:intergenic | 30.0% | |
| TGAACAGATAAAATCCTTAC+GGG | + | chr5.1:18961660-18961679 | MS.gene72902:CDS | 30.0% | |
| TGCATCTTAATGTATAGGAT+AGG | - | chr5.1:18959093-18959112 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACATTC+TGG | + | chr5.1:18958360-18958379 | MS.gene72902:intron | 30.0% | |
| TGTAAATACTCACAATAGGA+TGG | - | chr5.1:18960366-18960385 | None:intergenic | 30.0% | |
| TGTTTCTTAGTATTGTGTTG+TGG | + | chr5.1:18959810-18959829 | MS.gene72902:intron | 30.0% | |
| TTATATATCGGCATACAGAT+AGG | - | chr5.1:18959840-18959859 | None:intergenic | 30.0% | |
| ! | ATAATTTGAGACAGCACAAA+AGG | - | chr5.1:18959396-18959415 | None:intergenic | 30.0% |
| ! | ATGTTGGGGTATTTAGAATT+AGG | + | chr5.1:18957729-18957748 | MS.gene72902:intron | 30.0% |
| ! | ATTTTGCAGGCATTTAATTC+TGG | + | chr5.1:18960513-18960532 | MS.gene72902:CDS | 30.0% |
| ! | GACCAAAGATGTAGATATTT+TGG | + | chr5.1:18958014-18958033 | MS.gene72902:intron | 30.0% |
| ! | TGACGATTTTGTTGATGTTA+GGG | + | chr5.1:18957547-18957566 | MS.gene72902:intron | 30.0% |
| ! | TGTTGGGGTATTTAGAATTA+GGG | + | chr5.1:18957730-18957749 | MS.gene72902:intron | 30.0% |
| ! | TGTTTAGCTTCATTCTTCAA+TGG | + | chr5.1:18958692-18958711 | MS.gene72902:intron | 30.0% |
| !! | ATTTGTATTTTTGTTTGGGG+AGG | + | chr5.1:18957794-18957813 | MS.gene72902:intron | 30.0% |
| !! | TAGAAAGTACCTTAAAGTTC+AGG | + | chr5.1:18959888-18959907 | MS.gene72902:intron | 30.0% |
| !! | TATCAATCACGTTTTCAAGA+AGG | - | chr5.1:18957978-18957997 | None:intergenic | 30.0% |
| !! | TTTGTATTTTTGTTTGGGGA+GGG | + | chr5.1:18957795-18957814 | MS.gene72902:intron | 30.0% |
| !!! | ATGATGGGTTAAGATTTTAG+CGG | + | chr5.1:18957824-18957843 | MS.gene72902:intron | 30.0% |
| AAAACTCAGCAAATTCCTGA+CGG | - | chr5.1:18959263-18959282 | None:intergenic | 35.0% | |
| AAAGGAATGCAAGAATCTTC+TGG | + | chr5.1:18959146-18959165 | MS.gene72902:CDS | 35.0% | |
| AATTTCTTCACTCTGCTTGT+TGG | + | chr5.1:18960415-18960434 | MS.gene72902:intron | 35.0% | |
| AGAAAACAGCCTAATTCTTC+TGG | - | chr5.1:18961103-18961122 | None:intergenic | 35.0% | |
| AGTAAGGAAAGTAGATCAGA+TGG | + | chr5.1:18958180-18958199 | MS.gene72902:intron | 35.0% | |
| ATATCAATGGCAAACACAGA+AGG | - | chr5.1:18958755-18958774 | None:intergenic | 35.0% | |
| ATCACATTCTTTGCTTCTGA+TGG | + | chr5.1:18958510-18958529 | MS.gene72902:intron | 35.0% | |
| ATCTGTACCAGAAGAAGTTA+TGG | + | chr5.1:18957351-18957370 | MS.gene72902:CDS | 35.0% | |
| ATTTGGGAGTTTAGTTGAGA+CGG | + | chr5.1:18957524-18957543 | MS.gene72902:intron | 35.0% | |
| CAAACCAGAGCAATTTCTAA+TGG | - | chr5.1:18961375-18961394 | None:intergenic | 35.0% | |
| CAACTATCATCAGAGACAAA+GGG | + | chr5.1:18960033-18960052 | MS.gene72902:intron | 35.0% | |
| CATTAGAAATTGCTCTGGTT+TGG | + | chr5.1:18961373-18961392 | MS.gene72902:intron | 35.0% | |
| CTGATCTACTTTCCTTACTA+CGG | - | chr5.1:18958179-18958198 | None:intergenic | 35.0% | |
| CTTAACTACCATTAAGACCT+AGG | - | chr5.1:18959985-18960004 | None:intergenic | 35.0% | |
| GAGTATTCTTACTTAGGATC+AGG | + | chr5.1:18958879-18958898 | MS.gene72902:intron | 35.0% | |
| GCAGAAACACCTGATTTAAT+TGG | + | chr5.1:18961736-18961755 | MS.gene72902:CDS | 35.0% | |
| GGCATTTAATTCTGGTGATT+TGG | + | chr5.1:18960521-18960540 | MS.gene72902:CDS | 35.0% | |
| GGTATAATTGATCAAGTGGA+GGG | + | chr5.1:18961595-18961614 | MS.gene72902:CDS | 35.0% | |
| GTCTTTCGATTCCTATTTCA+GGG | + | chr5.1:18961346-18961365 | MS.gene72902:intron | 35.0% | |
| GTGTATTTGGACCTGAAAAA+CGG | - | chr5.1:18957417-18957436 | None:intergenic | 35.0% | |
| GTTGGACACAGATTAATGTT+GGG | - | chr5.1:18959918-18959937 | None:intergenic | 35.0% | |
| GTTGTCGAAATCATCACATT+CGG | + | chr5.1:18960687-18960706 | MS.gene72902:intron | 35.0% | |
| GTTTCCATTAGAAATTGCTC+TGG | + | chr5.1:18961368-18961387 | MS.gene72902:intron | 35.0% | |
| TAGCAAATCTTCTCCATCAT+TGG | + | chr5.1:18958551-18958570 | MS.gene72902:intron | 35.0% | |
| TCAAAATGAACAGAAGCTGT+TGG | + | chr5.1:18960605-18960624 | MS.gene72902:CDS | 35.0% | |
| TCAACTATCATCAGAGACAA+AGG | + | chr5.1:18960032-18960051 | MS.gene72902:intron | 35.0% | |
| TCACATTCTTTGCTTCTGAT+GGG | + | chr5.1:18958511-18958530 | MS.gene72902:intron | 35.0% | |
| TCTAATGGAAACCCTGAAAT+AGG | - | chr5.1:18961360-18961379 | None:intergenic | 35.0% | |
| TGAACAATGGTTTCCAATGA+TGG | - | chr5.1:18958567-18958586 | None:intergenic | 35.0% | |
| TGAATGGTACAATTCTCTTG+CGG | + | chr5.1:18957328-18957347 | MS.gene72902:CDS | 35.0% | |
| TGTCTTTCGATTCCTATTTC+AGG | + | chr5.1:18961345-18961364 | MS.gene72902:intron | 35.0% | |
| TGTTGGACACAGATTAATGT+TGG | - | chr5.1:18959919-18959938 | None:intergenic | 35.0% | |
| TTACAGATAGGCTCTTCATA+AGG | - | chr5.1:18960852-18960871 | None:intergenic | 35.0% | |
| TTAGGGTTTGATTGGAATTG+TGG | + | chr5.1:18957591-18957610 | MS.gene72902:intron | 35.0% | |
| TTCAAGTCGAACTTACAGAT+AGG | - | chr5.1:18960864-18960883 | None:intergenic | 35.0% | |
| ! | AGCCAAACATCCATTTTCTA+GGG | + | chr5.1:18959465-18959484 | MS.gene72902:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.1:18958340-18958359 | MS.gene72902:intron | 35.0% |
| ! | GAAGATTCTTGCATTCCTTT+TGG | - | chr5.1:18959146-18959165 | None:intergenic | 35.0% |
| ! | GAGTGAAAAGAGAGTGTATT+TGG | - | chr5.1:18957430-18957449 | None:intergenic | 35.0% |
| ! | GCAAGAATCTTCTGGAAAAT+GGG | + | chr5.1:18959154-18959173 | MS.gene72902:CDS | 35.0% |
| ! | GTGACGATTTTGTTGATGTT+AGG | + | chr5.1:18957546-18957565 | MS.gene72902:intron | 35.0% |
| ! | TAGCCAAACATCCATTTTCT+AGG | + | chr5.1:18959464-18959483 | MS.gene72902:intron | 35.0% |
| ! | TGAGGGTATAATTGATCAAG+TGG | + | chr5.1:18961591-18961610 | MS.gene72902:CDS | 35.0% |
| ! | TGCAAGAATCTTCTGGAAAA+TGG | + | chr5.1:18959153-18959172 | MS.gene72902:CDS | 35.0% |
| ! | TGTTCATTTTGAACTAGTGC+TGG | - | chr5.1:18960597-18960616 | None:intergenic | 35.0% |
| ! | TTGACGGAGTATTCTTACTT+AGG | + | chr5.1:18958873-18958892 | MS.gene72902:intron | 35.0% |
| !! | ACTTTTGAGTGAATGGGTTT+AGG | + | chr5.1:18957625-18957644 | MS.gene72902:intron | 35.0% |
| !! | AGAAGAATTAGGCTGTTTTC+TGG | + | chr5.1:18961102-18961121 | MS.gene72902:intron | 35.0% |
| !! | ATCGGAACTTTTGAGTGAAT+GGG | + | chr5.1:18957619-18957638 | MS.gene72902:intron | 35.0% |
| !! | ATGGCTCTACTATATTTTGC+AGG | + | chr5.1:18960500-18960519 | MS.gene72902:CDS | 35.0% |
| !! | ATTCAGTAGCGTTGATCTTT+AGG | + | chr5.1:18961057-18961076 | MS.gene72902:intron | 35.0% |
| !! | CAAAAGTGCTCTTCTCTATT+TGG | + | chr5.1:18959284-18959303 | MS.gene72902:CDS | 35.0% |
| !! | CTTTTGAGTGAATGGGTTTA+GGG | + | chr5.1:18957626-18957645 | MS.gene72902:intron | 35.0% |
| !! | GTTGATTTTAGTCTCGAAGT+CGG | - | chr5.1:18958944-18958963 | None:intergenic | 35.0% |
| !!! | GAGTGTCTTTATTTTCAACG+AGG | + | chr5.1:18958442-18958461 | MS.gene72902:intron | 35.0% |
| !!! | GGGTTTAGGGTTATTTCTTT+TGG | + | chr5.1:18957639-18957658 | MS.gene72902:intron | 35.0% |
| AAAATCCTTACGGGATCGAT+TGG | + | chr5.1:18961669-18961688 | MS.gene72902:CDS | 40.0% | |
| AAACTCAGCAAATTCCTGAC+GGG | - | chr5.1:18959262-18959281 | None:intergenic | 40.0% | |
| AAGGAAAGTAGATCAGATGG+AGG | + | chr5.1:18958183-18958202 | MS.gene72902:intron | 40.0% | |
| AAGTAGATCAGATGGAGGAT+AGG | + | chr5.1:18958188-18958207 | MS.gene72902:intron | 40.0% | |
| ACCCTGCTTCATTTGTCAAT+CGG | + | chr5.1:18960992-18961011 | MS.gene72902:intron | 40.0% | |
| ACCTAAGCCATTCGACAAAT+GGG | - | chr5.1:18958123-18958142 | None:intergenic | 40.0% | |
| ACCTTGCTCAAGCTTGAATA+AGG | - | chr5.1:18959121-18959140 | None:intergenic | 40.0% | |
| AGACAAGCGAAACAGTATGT+TGG | - | chr5.1:18961330-18961349 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr5.1:18958241-18958260 | MS.gene72902:intron | 40.0% | |
| AGTAGTAAGCTTTCAACTCG+TGG | + | chr5.1:18960919-18960938 | MS.gene72902:intron | 40.0% | |
| AGTCAGATCAAAAGAGGTAG+AGG | + | chr5.1:18958269-18958288 | MS.gene72902:intron | 40.0% | |
| AGTTTCTCCCCTTATCAATC+TGG | + | chr5.1:18959488-18959507 | MS.gene72902:intron | 40.0% | |
| ATTCCAGGTTCATCTGATTG+AGG | + | chr5.1:18961573-18961592 | MS.gene72902:intron | 40.0% | |
| ATTCTTACTTAGGATCAGGC+TGG | + | chr5.1:18958883-18958902 | MS.gene72902:intron | 40.0% | |
| CAAAATGTGCCAACTTGAGA+AGG | - | chr5.1:18958966-18958985 | None:intergenic | 40.0% | |
| CACAGAAGGTAATAGATGAG+TGG | - | chr5.1:18958741-18958760 | None:intergenic | 40.0% | |
| CAGGACAGAGATATGATATG+TGG | + | chr5.1:18959620-18959639 | MS.gene72902:intron | 40.0% | |
| CTATTTGGCATACACATCAG+TGG | + | chr5.1:18959299-18959318 | MS.gene72902:CDS | 40.0% | |
| CTCCCTAGAAAATGGATGTT+TGG | - | chr5.1:18959470-18959489 | None:intergenic | 40.0% | |
| GACAGATTAAGAGCCTTCTA+GGG | + | chr5.1:18960460-18960479 | MS.gene72902:intron | 40.0% | |
| GAGACAAAGGGTAACCTAAT+TGG | + | chr5.1:18960045-18960064 | MS.gene72902:intron | 40.0% | |
| GAGGATAGTCAGATCAAAAG+AGG | + | chr5.1:18958263-18958282 | MS.gene72902:intron | 40.0% | |
| GATCAACATTCTGTGTCTGA+TGG | + | chr5.1:18960632-18960651 | MS.gene72902:CDS | 40.0% | |
| GGACAGCATAGAAATCTTTG+TGG | - | chr5.1:18960104-18960123 | None:intergenic | 40.0% | |
| GGGGATAACATCTACAACTT+TGG | + | chr5.1:18960328-18960347 | MS.gene72902:CDS | 40.0% | |
| GGGTATAATTGATCAAGTGG+AGG | + | chr5.1:18961594-18961613 | MS.gene72902:CDS | 40.0% | |
| GTAGTAAGCTTTCAACTCGT+GGG | + | chr5.1:18960920-18960939 | MS.gene72902:intron | 40.0% | |
| TAATAGCTCGCATACACAGT+TGG | - | chr5.1:18959213-18959232 | None:intergenic | 40.0% | |
| TACCTAAGCCATTCGACAAA+TGG | - | chr5.1:18958124-18958143 | None:intergenic | 40.0% | |
| TCAATATCACAAATCCCGTC+AGG | + | chr5.1:18959245-18959264 | MS.gene72902:CDS | 40.0% | |
| TCGAATGGCTTAGGTAGTTT+GGG | + | chr5.1:18958128-18958147 | MS.gene72902:intron | 40.0% | |
| TGTGTATGCGAGCTATTACT+GGG | + | chr5.1:18959215-18959234 | MS.gene72902:CDS | 40.0% | |
| TGTTCAATACCCAGAACTCT+TGG | - | chr5.1:18961646-18961665 | None:intergenic | 40.0% | |
| TTCCAGGTTCATCTGATTGA+GGG | + | chr5.1:18961574-18961593 | MS.gene72902:intron | 40.0% | |
| TTCCTTACTACGGAATCTAC+AGG | - | chr5.1:18958169-18958188 | None:intergenic | 40.0% | |
| TTGGGCATTCCTGAACTTTA+AGG | - | chr5.1:18959900-18959919 | None:intergenic | 40.0% | |
| ! | CTGCCATTGGTTATCTTGAA+GGG | + | chr5.1:18959022-18959041 | MS.gene72902:CDS | 40.0% |
| ! | GATGTTTCTGCTTCAAGTAG+TGG | + | chr5.1:18960190-18960209 | MS.gene72902:intron | 40.0% |
| ! | TGATGGTGATTATTTGCAGC+CGG | + | chr5.1:18960749-18960768 | MS.gene72902:intron | 40.0% |
| ! | TGCCATTGGTTATCTTGAAG+GGG | + | chr5.1:18959023-18959042 | MS.gene72902:CDS | 40.0% |
| ! | TTTTTCCCCCATTTGTCGAA+TGG | + | chr5.1:18958113-18958132 | MS.gene72902:intron | 40.0% |
| !! | GATCGGAACTTTTGAGTGAA+TGG | + | chr5.1:18957618-18957637 | MS.gene72902:intron | 40.0% |
| !!! | GGTTATTTCTTTTGGATCCG+AGG | + | chr5.1:18957647-18957666 | MS.gene72902:intron | 40.0% |
| AAGCTTTCAACTCGTGGGTT+GGG | + | chr5.1:18960925-18960944 | MS.gene72902:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.1:18958244-18958263 | MS.gene72902:intron | 45.0% | |
| AGCCGATTGACAAATGAAGC+AGG | - | chr5.1:18960997-18961016 | None:intergenic | 45.0% | |
| AGGAAGTTGGGTAGGGTTTA+GGG | + | chr5.1:18957667-18957686 | MS.gene72902:intron | 45.0% | |
| CCTAAGCCATTCGACAAATG+GGG | - | chr5.1:18958122-18958141 | None:intergenic | 45.0% | |
| CGACAGATTAAGAGCCTTCT+AGG | + | chr5.1:18960459-18960478 | MS.gene72902:intron | 45.0% | |
| CGCTCTGCAATAACACTCAA+GGG | - | chr5.1:18960796-18960815 | None:intergenic | 45.0% | |
| CTAAGCCATTCGACAAATGG+GGG | - | chr5.1:18958121-18958140 | None:intergenic | 45.0% | |
| CTGTGTATGCGAGCTATTAC+TGG | + | chr5.1:18959214-18959233 | MS.gene72902:CDS | 45.0% | |
| CTTATCCAACTAAGCGAGGT+CGG | - | chr5.1:18958405-18958424 | None:intergenic | 45.0% | |
| GACCCCTTCAAGATAACCAA+TGG | - | chr5.1:18959028-18959047 | None:intergenic | 45.0% | |
| GACCTGTAGATTCCGTAGTA+AGG | + | chr5.1:18958164-18958183 | MS.gene72902:intron | 45.0% | |
| GAGAACTTCGAAGCGATTCA+AGG | - | chr5.1:18957295-18957314 | None:intergenic | 45.0% | |
| GCAACTAGCAAGCATTAGCA+TGG | - | chr5.1:18961165-18961184 | None:intergenic | 45.0% | |
| GCCGATTGACAAATGAAGCA+GGG | - | chr5.1:18960996-18961015 | None:intergenic | 45.0% | |
| GCTGATGCCATAACTTCTTC+TGG | - | chr5.1:18957361-18957380 | None:intergenic | 45.0% | |
| GGAATAGTTCGATCTTCCGA+AGG | - | chr5.1:18960775-18960794 | None:intergenic | 45.0% | |
| GGGAGAAACTCCCTAGAAAA+TGG | - | chr5.1:18959478-18959497 | None:intergenic | 45.0% | |
| GTCGAATGGCTTAGGTAGTT+TGG | + | chr5.1:18958127-18958146 | MS.gene72902:intron | 45.0% | |
| GTGTTGCATTGCATTCGTGT+TGG | - | chr5.1:18959936-18959955 | None:intergenic | 45.0% | |
| TAAACCCTACCCAACTTCCT+CGG | - | chr5.1:18957667-18957686 | None:intergenic | 45.0% | |
| TAAGCTTTCAACTCGTGGGT+TGG | + | chr5.1:18960924-18960943 | MS.gene72902:intron | 45.0% | |
| TACCCTCAATCAGATGAACC+TGG | - | chr5.1:18961579-18961598 | None:intergenic | 45.0% | |
| TAGACAGGCTAAGGATGCAA+TGG | - | chr5.1:18958482-18958501 | None:intergenic | 45.0% | |
| TCGCTCTGCAATAACACTCA+AGG | - | chr5.1:18960797-18960816 | None:intergenic | 45.0% | |
| TCGCTTAGTTGGATAAGGCT+TGG | + | chr5.1:18958408-18958427 | MS.gene72902:intron | 45.0% | |
| TCTCTCTGACTCATTCAAGC+TGG | + | chr5.1:18959326-18959345 | MS.gene72902:CDS | 45.0% | |
| TCTGAGAAAGAAGCTGCCAT+TGG | + | chr5.1:18959009-18959028 | MS.gene72902:CDS | 45.0% | |
| TGTACCATTCACCGAGTTCA+GGG | - | chr5.1:18957319-18957338 | None:intergenic | 45.0% | |
| TTGCTGTGATGGTTTCTCGA+CGG | + | chr5.1:18958983-18959002 | MS.gene72902:CDS | 45.0% | |
| TTGTACCATTCACCGAGTTC+AGG | - | chr5.1:18957320-18957339 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCAACTAAGCG+AGG | - | chr5.1:18958409-18958428 | None:intergenic | 45.0% |
| ! | CTTTTGGATCCGAGGAAGTT+GGG | + | chr5.1:18957655-18957674 | MS.gene72902:intron | 45.0% |
| ! | GCCTTATTCAAGCTTGAGCA+AGG | + | chr5.1:18959117-18959136 | MS.gene72902:CDS | 45.0% |
| ! | GCTGCCATTGGTTATCTTGA+AGG | + | chr5.1:18959021-18959040 | MS.gene72902:CDS | 45.0% |
| ! | GTTGGATAAGGCTTGGTTGT+TGG | + | chr5.1:18958415-18958434 | MS.gene72902:intron | 45.0% |
| ! | TCTTTTGGATCCGAGGAAGT+TGG | + | chr5.1:18957654-18957673 | MS.gene72902:intron | 45.0% |
| !! | GTTGGCACATTTTGCTGTGA+TGG | + | chr5.1:18958972-18958991 | MS.gene72902:CDS | 45.0% |
| !!! | TCTTGCTCTTGCCGTTTTTC+AGG | + | chr5.1:18957403-18957422 | MS.gene72902:CDS | 45.0% |
| AGGGCACAGTACATGTTTCC+TGG | + | chr5.1:18961614-18961633 | MS.gene72902:CDS | 50.0% | |
| CCCCATTTGTCGAATGGCTT+AGG | + | chr5.1:18958119-18958138 | MS.gene72902:intron | 50.0% | |
| CGAAGTTCTCACCCTGAACT+CGG | + | chr5.1:18957305-18957324 | MS.gene72902:CDS | 50.0% | |
| CGACCTCGCTTAGTTGGATA+AGG | + | chr5.1:18958403-18958422 | MS.gene72902:intron | 50.0% | |
| CTGCTTCAAGTAGTGGTCAG+AGG | + | chr5.1:18960197-18960216 | MS.gene72902:intron | 50.0% | |
| GAGGAAGTTGGGTAGGGTTT+AGG | + | chr5.1:18957666-18957685 | MS.gene72902:intron | 50.0% | |
| GATTATTTGCAGCCGGCCTT+CGG | + | chr5.1:18960756-18960775 | MS.gene72902:intron | 50.0% | |
| GCTTGAGCAAGGTGACCAAA+AGG | + | chr5.1:18959128-18959147 | MS.gene72902:CDS | 50.0% | |
| GGGCACAGTACATGTTTCCT+GGG | + | chr5.1:18961615-18961634 | MS.gene72902:CDS | 50.0% | |
| TAGTTCGATCTTCCGAAGGC+CGG | - | chr5.1:18960771-18960790 | None:intergenic | 50.0% | |
| TCCTTACGGGATCGATTGGA+CGG | + | chr5.1:18961673-18961692 | MS.gene72902:CDS | 50.0% | |
| TCGTGCGTCCTAGGTCTTAA+TGG | + | chr5.1:18959974-18959993 | MS.gene72902:intron | 50.0% | |
| TGGGGAGGGATGTGAATGAT+GGG | + | chr5.1:18957809-18957828 | MS.gene72902:intron | 50.0% | |
| TGGGTGCAACCAAGAGTTCT+GGG | + | chr5.1:18961634-18961653 | MS.gene72902:CDS | 50.0% | |
| TTCTATGCGCTGCTCTCTAG+TGG | - | chr5.1:18959067-18959086 | None:intergenic | 50.0% | |
| TTGGGGAGGGATGTGAATGA+TGG | + | chr5.1:18957808-18957827 | MS.gene72902:intron | 50.0% | |
| TTGTCCCTTTCTGCTCTGCT+GGG | + | chr5.1:18960307-18960326 | MS.gene72902:CDS | 50.0% | |
| ! | ATCAGGTGTTTCTGCCTCGA+TGG | - | chr5.1:18961731-18961750 | None:intergenic | 50.0% |
| ! | TTGGACCGGAAAAGTACACG+CGG | + | chr5.1:18961696-18961715 | MS.gene72902:CDS | 50.0% |
| !! | AGCCATTCCACTTTTGACCC+TGG | - | chr5.1:18960486-18960505 | None:intergenic | 50.0% |
| !! | ATTAAGAGCCTTCTAGGGCC+AGG | + | chr5.1:18960465-18960484 | MS.gene72902:CDS | 50.0% |
| !! | TTAAGAGCCTTCTAGGGCCA+GGG | + | chr5.1:18960466-18960485 | MS.gene72902:CDS | 50.0% |
| ACCGTCCAATCGATCCCGTA+AGG | - | chr5.1:18961677-18961696 | None:intergenic | 55.0% | |
| ACTAAGCGAGGTCGGCTACA+TGG | - | chr5.1:18958397-18958416 | None:intergenic | 55.0% | |
| ATCCCCCAGCAGAGCAGAAA+GGG | - | chr5.1:18960314-18960333 | None:intergenic | 55.0% | |
| CAGAACTCTTGGTTGCACCC+AGG | - | chr5.1:18961635-18961654 | None:intergenic | 55.0% | |
| CTGGGTGCAACCAAGAGTTC+TGG | + | chr5.1:18961633-18961652 | MS.gene72902:CDS | 55.0% | |
| CTTGTCCCTTTCTGCTCTGC+TGG | + | chr5.1:18960306-18960325 | MS.gene72902:CDS | 55.0% | |
| GATCGATTGGACGGTTGGAC+CGG | + | chr5.1:18961682-18961701 | MS.gene72902:CDS | 55.0% | |
| GGATCCGAGGAAGTTGGGTA+GGG | + | chr5.1:18957660-18957679 | MS.gene72902:intron | 55.0% | |
| GGCCAGGGTCAAAAGTGGAA+TGG | + | chr5.1:18960481-18960500 | MS.gene72902:CDS | 55.0% | |
| TACGGGATCGATTGGACGGT+TGG | + | chr5.1:18961677-18961696 | MS.gene72902:CDS | 55.0% | |
| TATCCCCCAGCAGAGCAGAA+AGG | - | chr5.1:18960315-18960334 | None:intergenic | 55.0% | |
| TGGATCCGAGGAAGTTGGGT+AGG | + | chr5.1:18957659-18957678 | MS.gene72902:intron | 55.0% | |
| TGTAGCCGACCTCGCTTAGT+TGG | + | chr5.1:18958397-18958416 | MS.gene72902:intron | 55.0% | |
| TGTCCCTTTCTGCTCTGCTG+GGG | + | chr5.1:18960308-18960327 | MS.gene72902:CDS | 55.0% | |
| TTGAGCTGTTCGTGCGTCCT+AGG | + | chr5.1:18959965-18959984 | MS.gene72902:intron | 55.0% | |
| ! | CAACGCCGCGTGTACTTTTC+CGG | - | chr5.1:18961704-18961723 | None:intergenic | 55.0% |
| ! | CTCACCCTGAACTCGGTGAA+TGG | + | chr5.1:18957312-18957331 | MS.gene72902:CDS | 55.0% |
| ! | CTTTTGACCCTGGCCCTAGA+AGG | - | chr5.1:18960476-18960495 | None:intergenic | 55.0% |
| ! | TCTAGGGCCAGGGTCAAAAG+TGG | + | chr5.1:18960476-18960495 | MS.gene72902:CDS | 55.0% |
| GTCCCTTTCTGCTCTGCTGG+GGG | + | chr5.1:18960309-18960328 | MS.gene72902:CDS | 60.0% | |
| CGCGGCGTTGTTGTCCATCG+AGG | + | chr5.1:18961714-18961733 | MS.gene72902:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 18957275 | 18961765 | 18957275 | ID=MS.gene72902 |
| chr5.1 | mRNA | 18957275 | 18961765 | 18957275 | ID=MS.gene72902.t1;Parent=MS.gene72902 |
| chr5.1 | exon | 18957275 | 18957424 | 18957275 | ID=MS.gene72902.t1.exon1;Parent=MS.gene72902.t1 |
| chr5.1 | CDS | 18957275 | 18957424 | 18957275 | ID=cds.MS.gene72902.t1;Parent=MS.gene72902.t1 |
| chr5.1 | exon | 18958901 | 18959347 | 18958901 | ID=MS.gene72902.t1.exon2;Parent=MS.gene72902.t1 |
| chr5.1 | CDS | 18958901 | 18959347 | 18958901 | ID=cds.MS.gene72902.t1;Parent=MS.gene72902.t1 |
| chr5.1 | exon | 18960292 | 18960372 | 18960292 | ID=MS.gene72902.t1.exon3;Parent=MS.gene72902.t1 |
| chr5.1 | CDS | 18960292 | 18960372 | 18960292 | ID=cds.MS.gene72902.t1;Parent=MS.gene72902.t1 |
| chr5.1 | exon | 18960465 | 18960667 | 18960465 | ID=MS.gene72902.t1.exon4;Parent=MS.gene72902.t1 |
| chr5.1 | CDS | 18960465 | 18960667 | 18960465 | ID=cds.MS.gene72902.t1;Parent=MS.gene72902.t1 |
| chr5.1 | exon | 18960768 | 18960867 | 18960768 | ID=MS.gene72902.t1.exon5;Parent=MS.gene72902.t1 |
| chr5.1 | CDS | 18960768 | 18960867 | 18960768 | ID=cds.MS.gene72902.t1;Parent=MS.gene72902.t1 |
| chr5.1 | exon | 18961580 | 18961765 | 18961580 | ID=MS.gene72902.t1.exon6;Parent=MS.gene72902.t1 |
| chr5.1 | CDS | 18961580 | 18961765 | 18961580 | ID=cds.MS.gene72902.t1;Parent=MS.gene72902.t1 |
| Gene Sequence |
| Protein sequence |
