Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67099.t1 | XP_003589235.1 | 100 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 3.20E-174 | 620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67099.t1 | Q9LT08 | 95.8 | 310 | 11 | 2 | 4 | 313 | 1 | 308 | 5.1e-165 | 581.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67099.t1 | G7I4G9 | 100.0 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 2.3e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene67099 | 0.819492 | 1.13E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene67099 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene67099 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene049499 | MS.gene67099 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene67099 | 0.848097 | 7.61E-60 | -1.69E-46 |
| MS.gene050359 | MS.gene67099 | 0.809324 | 2.00E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene67099 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene67099 | 0.808516 | 2.98E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene67099 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene67099 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene67099 | 0.813178 | 2.92E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene67099 | 0.817986 | 2.48E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene67099 | 0.827441 | 1.56E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene67099 | 0.819996 | 8.66E-53 | -1.69E-46 |
| MS.gene051628 | MS.gene67099 | 0.816258 | 6.07E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene67099 | 0.810796 | 9.65E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene67099 | 0.825614 | 4.26E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene67099 | 0.806717 | 7.18E-50 | -1.69E-46 |
| MS.gene052335 | MS.gene67099 | 0.8235 | 1.34E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene67099 | 0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene67099 | 0.834217 | 3.40E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene67099 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene67099 | 0.830507 | 2.82E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene67099 | 0.828775 | 7.45E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene67099 | 0.847084 | 1.45E-59 | -1.69E-46 |
| MS.gene053143 | MS.gene67099 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene053564 | MS.gene67099 | 0.804141 | 2.49E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene67099 | 0.830856 | 2.32E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene67099 | 0.803158 | 3.98E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene67099 | 0.823362 | 1.44E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene67099 | 0.815857 | 7.46E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene67099 | 0.820646 | 6.15E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene67099 | 0.803631 | 3.18E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene67099 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene67099 | 0.855287 | 6.98E-62 | -1.69E-46 |
| MS.gene055841 | MS.gene67099 | 0.816351 | 5.78E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene67099 | 0.832669 | 8.29E-56 | -1.69E-46 |
| MS.gene056045 | MS.gene67099 | 0.800274 | 1.56E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene67099 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene67099 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene67099 | 0.801006 | 1.10E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene67099 | 0.851135 | 1.08E-60 | -1.69E-46 |
| MS.gene05686 | MS.gene67099 | 0.807816 | 4.20E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene67099 | 0.851262 | 9.95E-61 | -1.69E-46 |
| MS.gene057102 | MS.gene67099 | 0.809432 | 1.90E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene67099 | 0.82311 | 1.65E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene67099 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene67099 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene67099 | 0.813616 | 2.34E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene67099 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene058976 | MS.gene67099 | 0.804463 | 2.13E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene67099 | 0.845305 | 4.41E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene67099 | -0.810545 | 1.09E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene67099 | 0.823496 | 1.34E-53 | -1.69E-46 |
| MS.gene060259 | MS.gene67099 | 0.80498 | 1.66E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene67099 | 0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene67099 | 0.816293 | 5.96E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene67099 | 0.816803 | 4.58E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene67099 | 0.825116 | 5.59E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene67099 | 0.815745 | 7.90E-52 | -1.69E-46 |
| MS.gene061160 | MS.gene67099 | 0.822124 | 2.80E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67099.t1 | MTR_1g019930 | 100.000 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 0.0 | 650 |
| MS.gene67099.t1 | MTR_2g017680 | 99.032 | 310 | 2 | 1 | 4 | 313 | 1 | 309 | 0.0 | 636 |
| MS.gene67099.t1 | MTR_3g108790 | 42.029 | 207 | 107 | 9 | 33 | 234 | 58 | 256 | 3.00e-35 | 131 |
| MS.gene67099.t1 | MTR_8g006640 | 62.857 | 35 | 13 | 0 | 102 | 136 | 29 | 63 | 2.32e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67099.t1 | AT5G23540 | 95.806 | 310 | 11 | 2 | 4 | 313 | 1 | 308 | 0.0 | 611 |
| MS.gene67099.t1 | AT5G23540 | 97.683 | 259 | 6 | 0 | 55 | 313 | 1 | 259 | 0.0 | 528 |
| MS.gene67099.t1 | AT1G71230 | 40.566 | 212 | 103 | 8 | 33 | 234 | 57 | 255 | 3.51e-34 | 128 |
| MS.gene67099.t1 | AT1G22920 | 39.806 | 206 | 113 | 8 | 33 | 234 | 57 | 255 | 1.61e-32 | 124 |
| MS.gene67099.t1 | AT1G22920 | 39.806 | 206 | 113 | 8 | 33 | 234 | 57 | 255 | 2.08e-32 | 123 |
| MS.gene67099.t1 | AT5G27607 | 76.596 | 47 | 11 | 0 | 100 | 146 | 70 | 116 | 2.56e-19 | 82.4 |
Find 83 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTGGCTGCTGGCTTTC+CGG | 0.193654 | 1.3:+3764079 | MS.gene67099:CDS |
| CACATCCTGGATTTGGCTGC+TGG | 0.286015 | 1.3:+3764071 | MS.gene67099:CDS |
| CTGCACTGCCTTGTTGTACT+TGG | 0.295287 | 1.3:-3765913 | None:intergenic |
| AGGTGGTCATTGATGCTTTC+CGG | 0.296529 | 1.3:+3764986 | MS.gene67099:CDS |
| TATCATTCACATCCTGGATT+TGG | 0.322391 | 1.3:+3764064 | MS.gene67099:CDS |
| GAAGTTATGGGTTTAATGTT+GGG | 0.324843 | 1.3:+3762833 | MS.gene67099:CDS |
| TCAAACATTGTTCAGACTTT+GGG | 0.328260 | 1.3:+3766035 | MS.gene67099:CDS |
| GATCCTATTCAGAGTGTTAA+AGG | 0.332585 | 1.3:+3764961 | MS.gene67099:CDS |
| TGGTGTACCTATGGAAGTTA+TGG | 0.339817 | 1.3:+3762820 | MS.gene67099:CDS |
| ATCAAACATTGTTCAGACTT+TGG | 0.343443 | 1.3:+3766034 | MS.gene67099:CDS |
| AAGACACTCACTTGGATAGA+TGG | 0.346214 | 1.3:-3765084 | None:intergenic |
| GGAAGTTATGGGTTTAATGT+TGG | 0.366620 | 1.3:+3762832 | MS.gene67099:CDS |
| ACTCAATAGCAATCAATTAC+AGG | 0.372816 | 1.3:+3765222 | MS.gene67099:CDS |
| TTGCCTTTAACACTCTGAAT+AGG | 0.383773 | 1.3:-3764964 | None:intergenic |
| AAACTTGCTCAGATGAATCT+AGG | 0.385066 | 1.3:-3762640 | None:intergenic |
| CTTGATATGTTGAAACAAAC+TGG | 0.388419 | 1.3:+3762965 | MS.gene67099:CDS |
| GGTGTACCTATGGAAGTTAT+GGG | 0.391133 | 1.3:+3762821 | MS.gene67099:CDS |
| TGACCCAGCATCATAGTTTG+TGG | 0.401995 | 1.3:-3765018 | None:intergenic |
| AACTAATGAACAAACTGTTC+AGG | 0.404384 | 1.3:+3765337 | MS.gene67099:CDS |
| TCGTTGATGAGTATACTGTT+AGG | 0.407413 | 1.3:+3762861 | MS.gene67099:CDS |
| TTAACCTTCATAAGAAGAAA+TGG | 0.410261 | 1.3:+3765273 | MS.gene67099:CDS |
| CAGTCCATTTCTTCTTATGA+AGG | 0.428123 | 1.3:-3765277 | None:intergenic |
| CAAAGAATGTTTGCGGGTGC+AGG | 0.429014 | 1.3:+3762578 | MS.gene67099:CDS |
| CGTTGATGAGTATACTGTTA+GGG | 0.432147 | 1.3:+3762862 | MS.gene67099:CDS |
| TTCAGGCCAGAGATGGTTGT+AGG | 0.442433 | 1.3:+3764037 | MS.gene67099:intron |
| GTTCAGATGGCCCAAGTTGG+AGG | 0.446964 | 1.3:-3765058 | None:intergenic |
| TTGGTGAATTTAGGTAGGGC+TGG | 0.447981 | 1.3:+3762800 | MS.gene67099:intron |
| GCGACAGACAACCTCCAACT+TGG | 0.454333 | 1.3:+3765047 | MS.gene67099:CDS |
| GCTATGCCTCAGAGTGGTAC+TGG | 0.454847 | 1.3:+3762899 | MS.gene67099:CDS |
| AGACTTCAAAGAATGTTTGC+GGG | 0.454988 | 1.3:+3762572 | MS.gene67099:CDS |
| GGATAGATGGCTTGTTCAGA+TGG | 0.463953 | 1.3:-3765071 | None:intergenic |
| GGCTTTAAATCAACGGGCAG+TGG | 0.464164 | 1.3:+3764927 | MS.gene67099:CDS |
| TAATCCACAAACTATGATGC+TGG | 0.468722 | 1.3:+3765014 | MS.gene67099:CDS |
| GAAAGCCAGCAGCCAAATCC+AGG | 0.481373 | 1.3:-3764076 | None:intergenic |
| AGCATCCTGCCTTCCGACAT+TGG | 0.486252 | 1.3:-3765973 | None:intergenic |
| AACAACAACCATGTCAGGTA+TGG | 0.489135 | 1.3:+3762547 | None:intergenic |
| GGTTGGTATCATTCACATCC+TGG | 0.489485 | 1.3:+3764058 | MS.gene67099:CDS |
| TAGTTTGTGGATTAATCAGC+CGG | 0.499510 | 1.3:-3765005 | None:intergenic |
| CAAGTACAACAAGGCAGTGC+AGG | 0.499844 | 1.3:+3765914 | MS.gene67099:CDS |
| GGACTGATGGTTTGACACTC+AGG | 0.502110 | 1.3:+3765294 | MS.gene67099:CDS |
| TGCTCAGATGAATCTAGGGT+GGG | 0.502945 | 1.3:-3762635 | None:intergenic |
| AGGTAGGGCTGGTGTACCTA+TGG | 0.507375 | 1.3:+3762811 | MS.gene67099:intron |
| GCGGGTGCAGGTGGAGCACT+CGG | 0.510885 | 1.3:+3762590 | MS.gene67099:CDS |
| TACCAACCTACAACCATCTC+TGG | 0.511025 | 1.3:-3764043 | None:intergenic |
| CGACAGACAACCTCCAACTT+GGG | 0.511124 | 1.3:+3765048 | MS.gene67099:CDS |
| TCGATAACAACAACCATGTC+AGG | 0.518171 | 1.3:+3762542 | None:intergenic |
| TGTGGACATTAACACACAAC+AGG | 0.519212 | 1.3:+3764102 | MS.gene67099:CDS |
| AATTGCCAATGTCGGAAGGC+AGG | 0.531358 | 1.3:+3765968 | MS.gene67099:CDS |
| AGAATGTTTGCGGGTGCAGG+TGG | 0.533259 | 1.3:+3762581 | MS.gene67099:CDS |
| GCTCAGATGAATCTAGGGTG+GGG | 0.536007 | 1.3:-3762634 | None:intergenic |
| AACTTGCTCAGATGAATCTA+GGG | 0.538949 | 1.3:-3762639 | None:intergenic |
| AAGTTATGGGTTTAATGTTG+GGG | 0.546173 | 1.3:+3762834 | MS.gene67099:CDS |
| AATAATGTCGGTTCAAGCCA+TGG | 0.548960 | 1.3:-3765199 | None:intergenic |
| TGGCTGCTGGCTTTCCGGTG+TGG | 0.551510 | 1.3:+3764084 | MS.gene67099:CDS |
| AAGACTTCAAAGAATGTTTG+CGG | 0.555255 | 1.3:+3762571 | MS.gene67099:CDS |
| CTTGTTCAGATGGCCCAAGT+TGG | 0.556282 | 1.3:-3765061 | None:intergenic |
| TTTCTGTTTCAGGCCAGAGA+TGG | 0.557983 | 1.3:+3764030 | MS.gene67099:intron |
| GGCCAGAGATGGTTGTAGGT+TGG | 0.558155 | 1.3:+3764041 | MS.gene67099:intron |
| CTCAGATGAATCTAGGGTGG+GGG | 0.560533 | 1.3:-3762633 | None:intergenic |
| CATAAGAAGAAATGGACTGA+TGG | 0.560914 | 1.3:+3765281 | MS.gene67099:CDS |
| ATTAAACCCATAACTTCCAT+AGG | 0.562193 | 1.3:-3762827 | None:intergenic |
| AAGTCTTTCCATACCTGACA+TGG | 0.565400 | 1.3:-3762555 | None:intergenic |
| TTGCTATTGAGTAATAATGT+CGG | 0.574217 | 1.3:-3765211 | None:intergenic |
| TCAACGGGCAGTGGCTGTCG+TGG | 0.579907 | 1.3:+3764936 | MS.gene67099:CDS |
| AATTAGAAACATGCTCCTCA+AGG | 0.585638 | 1.3:-3766004 | None:intergenic |
| AATCCACAAACTATGATGCT+GGG | 0.587299 | 1.3:+3765015 | MS.gene67099:CDS |
| ACGGGCAGTGGCTGTCGTGG+TGG | 0.593252 | 1.3:+3764939 | MS.gene67099:CDS |
| AAACTTGCAATTGCCAATGT+CGG | 0.594399 | 1.3:+3765960 | MS.gene67099:CDS |
| ATATGTTGAAACAAACTGGA+AGG | 0.596652 | 1.3:+3762969 | MS.gene67099:CDS |
| GTACAACAAGGCAGTGCAGG+AGG | 0.596933 | 1.3:+3765917 | MS.gene67099:CDS |
| CTTCTCAAAATGCTCAAACA+TGG | 0.601308 | 1.3:+3762680 | MS.gene67099:CDS |
| AAGTTGGAGGTTGTCTGTCG+CGG | 0.603477 | 1.3:-3765045 | None:intergenic |
| TTGCAATTGCCAATGTCGGA+AGG | 0.605525 | 1.3:+3765964 | MS.gene67099:CDS |
| TTGCTCAGATGAATCTAGGG+TGG | 0.606378 | 1.3:-3762636 | None:intergenic |
| TATTCAGAGTGTTAAAGGCA+AGG | 0.607906 | 1.3:+3764966 | MS.gene67099:CDS |
| ACTCGGCGGTCATCCACCAC+CGG | 0.646687 | 1.3:+3762607 | MS.gene67099:CDS |
| AGTTATGGGTTTAATGTTGG+GGG | 0.647215 | 1.3:+3762835 | MS.gene67099:CDS |
| GGATGCTAAGAAGCACCTTG+AGG | 0.677016 | 1.3:+3765989 | MS.gene67099:CDS |
| GGTGCAGGTGGAGCACTCGG+CGG | 0.713068 | 1.3:+3762593 | MS.gene67099:CDS |
| TTTAGCAACCAAGTACAACA+AGG | 0.716028 | 1.3:+3765905 | MS.gene67099:CDS |
| CTAACACCAGTACCACTCTG+AGG | 0.717528 | 1.3:-3762905 | None:intergenic |
| TCAGAGTGTTAAAGGCAAGG+TGG | 0.720728 | 1.3:+3764969 | MS.gene67099:CDS |
| TTGTGTGTTAATGTCCACAC+CGG | 0.745909 | 1.3:-3764098 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTTTTTCTTTATC+TGG | + | chr1.3:3765441-3765460 | MS.gene67099:intron | 10.0% |
| !! | AAAAATCCCAATAAAAAATT+AGG | - | chr1.3:3762780-3762799 | None:intergenic | 15.0% |
| !! | AAAATCCCAATAAAAAATTA+GGG | - | chr1.3:3762779-3762798 | None:intergenic | 15.0% |
| !! | AAATTAGGGTTTAAAAAATT+TGG | - | chr1.3:3762765-3762784 | None:intergenic | 15.0% |
| !! | AATTAGGGTTTAAAAAATTT+GGG | - | chr1.3:3762764-3762783 | None:intergenic | 15.0% |
| !! | ATGATATTTATGAAATTTCT+GGG | + | chr1.3:3764217-3764236 | MS.gene67099:intron | 15.0% |
| !! | TATGATATCATATAACAATA+CGG | - | chr1.3:3764437-3764456 | None:intergenic | 15.0% |
| !!! | ACATTTATAAAGCTTTTATA+AGG | + | chr1.3:3763683-3763702 | MS.gene67099:intron | 15.0% |
| !!! | AGTATTTTTATTGCTAAATT+TGG | + | chr1.3:3764262-3764281 | MS.gene67099:intron | 15.0% |
| !!! | ATCTTTTTATTTTACTTGTT+TGG | - | chr1.3:3764199-3764218 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTGGGATTTTTT+TGG | + | chr1.3:3762781-3762800 | MS.gene67099:intron | 15.0% |
| !!! | GTATTTTTATTGCTAAATTT+GGG | + | chr1.3:3764263-3764282 | MS.gene67099:intron | 15.0% |
| !!! | TTAAACCCTAATTTTTTATT+GGG | + | chr1.3:3762771-3762790 | MS.gene67099:intron | 15.0% |
| !!! | TTTAAACCCTAATTTTTTAT+TGG | + | chr1.3:3762770-3762789 | MS.gene67099:intron | 15.0% |
| !!! | TTTCACAAACATTATTTTAT+CGG | + | chr1.3:3765630-3765649 | MS.gene67099:intron | 15.0% |
| !! | AGAAAAGTAAATTTATTTCC+TGG | + | chr1.3:3764292-3764311 | MS.gene67099:intron | 20.0% |
| !! | ATACCATAAGTAAAATGATA+GGG | + | chr1.3:3763387-3763406 | MS.gene67099:intron | 20.0% |
| !! | ATTAGGGTTTAAAAAATTTG+GGG | - | chr1.3:3762763-3762782 | None:intergenic | 20.0% |
| !! | CAATAATGTGAATGTTATAA+TGG | + | chr1.3:3763532-3763551 | MS.gene67099:intron | 20.0% |
| !! | GATGATATTTATGAAATTTC+TGG | + | chr1.3:3764216-3764235 | MS.gene67099:intron | 20.0% |
| !! | TAAAACGAATTTATGAAACT+TGG | + | chr1.3:3763355-3763374 | MS.gene67099:intron | 20.0% |
| !! | TAAATTTAATTGTTGCTCAT+AGG | - | chr1.3:3765576-3765595 | None:intergenic | 20.0% |
| !! | TATAAAAGTTTAGATGAGTT+TGG | + | chr1.3:3763200-3763219 | MS.gene67099:intron | 20.0% |
| !! | TGATATTTATGAAATTTCTG+GGG | + | chr1.3:3764218-3764237 | MS.gene67099:intron | 20.0% |
| !!! | ATATTTCATTTAAGTTAGAC+AGG | + | chr1.3:3763317-3763336 | MS.gene67099:intron | 20.0% |
| !!! | GAATTTTGCATTTCTTAAAT+GGG | + | chr1.3:3763045-3763064 | MS.gene67099:intron | 20.0% |
| !!! | GATTTTACTAATTTAAGTCA+AGG | - | chr1.3:3765798-3765817 | None:intergenic | 20.0% |
| !!! | TGAATTTTGCATTTCTTAAA+TGG | + | chr1.3:3763044-3763063 | MS.gene67099:intron | 20.0% |
| ! | ACACAAAACAATATAGAACT+AGG | + | chr1.3:3763565-3763584 | MS.gene67099:intron | 25.0% |
| ! | ATTGAAACTAACTGTAAACT+AGG | + | chr1.3:3764774-3764793 | MS.gene67099:intron | 25.0% |
| ! | CACAAAACAATATAGAACTA+GGG | + | chr1.3:3763566-3763585 | MS.gene67099:intron | 25.0% |
| ! | CATACCATAAGTAAAATGAT+AGG | + | chr1.3:3763386-3763405 | MS.gene67099:intron | 25.0% |
| ! | TAAGCAAAAAATTGAGATGT+TGG | + | chr1.3:3763473-3763492 | MS.gene67099:intron | 25.0% |
| ! | TTAACCTTCATAAGAAGAAA+TGG | + | chr1.3:3765273-3765292 | MS.gene67099:CDS | 25.0% |
| ! | TTAGGGTTTAAAAAATTTGG+GGG | - | chr1.3:3762762-3762781 | None:intergenic | 25.0% |
| ! | TTGAAACTAACTGTAAACTA+GGG | + | chr1.3:3764775-3764794 | MS.gene67099:intron | 25.0% |
| !! | ATATTTATGAAATTTCTGGG+GGG | + | chr1.3:3764220-3764239 | MS.gene67099:intron | 25.0% |
| !! | GATATTTATGAAATTTCTGG+GGG | + | chr1.3:3764219-3764238 | MS.gene67099:intron | 25.0% |
| !! | TAATGAGTTGGATCAAAATA+TGG | - | chr1.3:3764462-3764481 | None:intergenic | 25.0% |
| !! | TTGCTATTGAGTAATAATGT+CGG | - | chr1.3:3765214-3765233 | None:intergenic | 25.0% |
| !!! | AAATTTTAAAGACACTCACT+TGG | - | chr1.3:3765095-3765114 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTGAATTTAGGTA+GGG | + | chr1.3:3762796-3762815 | MS.gene67099:intron | 25.0% |
| !!! | TTTTTTTGGTGAATTTAGGT+AGG | + | chr1.3:3762795-3762814 | MS.gene67099:intron | 25.0% |
| AAACTTAGACTTTCTGTTTC+AGG | + | chr1.3:3764020-3764039 | MS.gene67099:intron | 30.0% | |
| AACTAATGAACAAACTGTTC+AGG | + | chr1.3:3765337-3765356 | MS.gene67099:CDS | 30.0% | |
| AAGACTTCAAAGAATGTTTG+CGG | + | chr1.3:3762571-3762590 | MS.gene67099:CDS | 30.0% | |
| AAGTTATGGGTTTAATGTTG+GGG | + | chr1.3:3762834-3762853 | MS.gene67099:CDS | 30.0% | |
| ACATGTAGAGATTAATGAGT+TGG | - | chr1.3:3764474-3764493 | None:intergenic | 30.0% | |
| ACTCAATAGCAATCAATTAC+AGG | + | chr1.3:3765222-3765241 | MS.gene67099:CDS | 30.0% | |
| AGAAGAGAACAGAAAAAAGA+AGG | - | chr1.3:3765408-3765427 | None:intergenic | 30.0% | |
| AGACATTATTCATGATAGAC+AGG | + | chr1.3:3763813-3763832 | MS.gene67099:intron | 30.0% | |
| ATAAGGCAATTAGAGATAAG+TGG | + | chr1.3:3763700-3763719 | MS.gene67099:intron | 30.0% | |
| ATACACGAAAATACAAAGAC+AGG | - | chr1.3:3765680-3765699 | None:intergenic | 30.0% | |
| ATATGTTGAAACAAACTGGA+AGG | + | chr1.3:3762969-3762988 | MS.gene67099:CDS | 30.0% | |
| ATCAAACATTGTTCAGACTT+TGG | + | chr1.3:3766034-3766053 | MS.gene67099:CDS | 30.0% | |
| ATTAAACCCATAACTTCCAT+AGG | - | chr1.3:3762830-3762849 | None:intergenic | 30.0% | |
| ATTGCATTGGATAGAAAAGT+TGG | + | chr1.3:3763592-3763611 | MS.gene67099:intron | 30.0% | |
| ATTTAATTGTTGCTCATAGG+TGG | - | chr1.3:3765573-3765592 | None:intergenic | 30.0% | |
| CAGGATATTATCATGTCATT+TGG | + | chr1.3:3763832-3763851 | MS.gene67099:intron | 30.0% | |
| CTCTACATGTGTATAAGAAT+TGG | + | chr1.3:3764484-3764503 | MS.gene67099:intron | 30.0% | |
| CTTGATATGTTGAAACAAAC+TGG | + | chr1.3:3762965-3762984 | MS.gene67099:CDS | 30.0% | |
| GAAGTTATGGGTTTAATGTT+GGG | + | chr1.3:3762833-3762852 | MS.gene67099:CDS | 30.0% | |
| GGTATGAGAAATTGAATGAA+GGG | - | chr1.3:3762741-3762760 | None:intergenic | 30.0% | |
| GTTTCAATTACAAATTCTCC+AGG | - | chr1.3:3764762-3764781 | None:intergenic | 30.0% | |
| TAAGGCAATTAGAGATAAGT+GGG | + | chr1.3:3763701-3763720 | MS.gene67099:intron | 30.0% | |
| TAATGGTTTATTCTCGAGAA+TGG | + | chr1.3:3765731-3765750 | MS.gene67099:intron | 30.0% | |
| TACACGAAAATACAAAGACA+GGG | - | chr1.3:3765679-3765698 | None:intergenic | 30.0% | |
| TCAAACATTGTTCAGACTTT+GGG | + | chr1.3:3766035-3766054 | MS.gene67099:CDS | 30.0% | |
| TCAGGTATGTTAAGATTCTT+GGG | + | chr1.3:3765355-3765374 | MS.gene67099:intron | 30.0% | |
| TGAATCAAAATCCCTCTTAA+TGG | - | chr1.3:3763779-3763798 | None:intergenic | 30.0% | |
| TGAATGTTATAATGGTTGTG+TGG | + | chr1.3:3763540-3763559 | MS.gene67099:intron | 30.0% | |
| TTCAGGTATGTTAAGATTCT+TGG | + | chr1.3:3765354-3765373 | MS.gene67099:intron | 30.0% | |
| TTGCATTGGATAGAAAAGTT+GGG | + | chr1.3:3763593-3763612 | MS.gene67099:intron | 30.0% | |
| TTGCTTAAATCCTATGGTTA+TGG | - | chr1.3:3763428-3763447 | None:intergenic | 30.0% | |
| ! | AATCTTGCTTTAGGTGATTT+GGG | + | chr1.3:3763648-3763667 | MS.gene67099:intron | 30.0% |
| ! | ATTTTCGTGTATGATGTTGT+GGG | + | chr1.3:3765688-3765707 | MS.gene67099:intron | 30.0% |
| ! | CTTCCCTATCATTTTACTTA+TGG | - | chr1.3:3763393-3763412 | None:intergenic | 30.0% |
| ! | TATATAGATTATGAAGTGCC+TGG | + | chr1.3:3764741-3764760 | MS.gene67099:intron | 30.0% |
| ! | TATTTTCGTGTATGATGTTG+TGG | + | chr1.3:3765687-3765706 | MS.gene67099:intron | 30.0% |
| ! | TGACTTCAAATTCTCCTTTT+AGG | + | chr1.3:3765169-3765188 | MS.gene67099:intron | 30.0% |
| ! | TTATCTATTGCAGAGTTTTG+AGG | + | chr1.3:3764906-3764925 | MS.gene67099:intron | 30.0% |
| !!! | GGGATTTTTTTGGTGAATTT+AGG | + | chr1.3:3762791-3762810 | MS.gene67099:intron | 30.0% |
| !!! | GTTTTGAGGCTTTAAATCAA+CGG | + | chr1.3:3764920-3764939 | MS.gene67099:CDS | 30.0% |
| !!! | TTTTGAGGCTTTAAATCAAC+GGG | + | chr1.3:3764921-3764940 | MS.gene67099:CDS | 30.0% |
| AAACTTGCAATTGCCAATGT+CGG | + | chr1.3:3765960-3765979 | MS.gene67099:CDS | 35.0% | |
| AACATCCCAATCTAAGAATG+TGG | - | chr1.3:3764584-3764603 | None:intergenic | 35.0% | |
| AATCCACAAACTATGATGCT+GGG | + | chr1.3:3765015-3765034 | MS.gene67099:CDS | 35.0% | |
| AATTAGAAACATGCTCCTCA+AGG | - | chr1.3:3766007-3766026 | None:intergenic | 35.0% | |
| ACATCCCAATCTAAGAATGT+GGG | - | chr1.3:3764583-3764602 | None:intergenic | 35.0% | |
| ACGTCCAAATTAGAGATAGA+GGG | + | chr1.3:3763728-3763747 | MS.gene67099:intron | 35.0% | |
| AGAACACTAAAGCATAATCC+AGG | - | chr1.3:3764313-3764332 | None:intergenic | 35.0% | |
| AGACTTCAAAGAATGTTTGC+GGG | + | chr1.3:3762572-3762591 | MS.gene67099:CDS | 35.0% | |
| AGAGATGTAACCATAACCAT+AGG | + | chr1.3:3763415-3763434 | MS.gene67099:intron | 35.0% | |
| AGCAATCTATCATCAACTAC+AGG | - | chr1.3:3765762-3765781 | None:intergenic | 35.0% | |
| AGTTATGGGTTTAATGTTGG+GGG | + | chr1.3:3762835-3762854 | MS.gene67099:CDS | 35.0% | |
| AGTTTAGATGAGTTGTGTCT+CGG | + | chr1.3:3763100-3763119 | MS.gene67099:intron | 35.0% | |
| AGTTTAGATGAGTTTGGTCT+CGG | + | chr1.3:3763206-3763225 | MS.gene67099:intron | 35.0% | |
| ATTACCCCACATTCTTAGAT+TGG | + | chr1.3:3764575-3764594 | MS.gene67099:intron | 35.0% | |
| CAAAATCCCTCTTAATGGTT+TGG | - | chr1.3:3763774-3763793 | None:intergenic | 35.0% | |
| CAGTCCATTTCTTCTTATGA+AGG | - | chr1.3:3765280-3765299 | None:intergenic | 35.0% | |
| CATAAGCTTCATCATGTTGT+AGG | + | chr1.3:3765500-3765519 | MS.gene67099:intron | 35.0% | |
| CTTCTCAAAATGCTCAAACA+TGG | + | chr1.3:3762680-3762699 | MS.gene67099:CDS | 35.0% | |
| GGAAGTTATGGGTTTAATGT+TGG | + | chr1.3:3762832-3762851 | MS.gene67099:CDS | 35.0% | |
| GGGTATGAGAAATTGAATGA+AGG | - | chr1.3:3762742-3762761 | None:intergenic | 35.0% | |
| TAATCCACAAACTATGATGC+TGG | + | chr1.3:3765014-3765033 | MS.gene67099:CDS | 35.0% | |
| TACCATCTCTTATGAAGATG+TGG | + | chr1.3:3763617-3763636 | MS.gene67099:intron | 35.0% | |
| TATAGGCCAAACCATTAAGA+GGG | + | chr1.3:3763765-3763784 | MS.gene67099:intron | 35.0% | |
| TATCATTCACATCCTGGATT+TGG | + | chr1.3:3764064-3764083 | MS.gene67099:CDS | 35.0% | |
| TCAAGTCCAGACATTATTCA+TGG | - | chr1.3:3763979-3763998 | None:intergenic | 35.0% | |
| TCTTGTAGCCAACTTTACTT+GGG | + | chr1.3:3763856-3763875 | MS.gene67099:intron | 35.0% | |
| TGCATTGGATAGAAAAGTTG+GGG | + | chr1.3:3763594-3763613 | MS.gene67099:intron | 35.0% | |
| TTACCCCACATTCTTAGATT+GGG | + | chr1.3:3764576-3764595 | MS.gene67099:intron | 35.0% | |
| TTCTCTCCATGAATAATGTC+TGG | + | chr1.3:3763970-3763989 | MS.gene67099:intron | 35.0% | |
| TTCTTGTAGCCAACTTTACT+TGG | + | chr1.3:3763855-3763874 | MS.gene67099:intron | 35.0% | |
| TTGCCTTTAACACTCTGAAT+AGG | - | chr1.3:3764967-3764986 | None:intergenic | 35.0% | |
| TTTAGCAACCAAGTACAACA+AGG | + | chr1.3:3765905-3765924 | MS.gene67099:CDS | 35.0% | |
| ! | AAACTTGCTCAGATGAATCT+AGG | - | chr1.3:3762643-3762662 | None:intergenic | 35.0% |
| ! | AACTTGCTCAGATGAATCTA+GGG | - | chr1.3:3762642-3762661 | None:intergenic | 35.0% |
| ! | CACAACTTGCTTAAATCCTA+TGG | - | chr1.3:3763434-3763453 | None:intergenic | 35.0% |
| ! | CGTTGATGAGTATACTGTTA+GGG | + | chr1.3:3762862-3762881 | MS.gene67099:CDS | 35.0% |
| ! | GAATCTTGCTTTAGGTGATT+TGG | + | chr1.3:3763647-3763666 | MS.gene67099:intron | 35.0% |
| ! | GATCCTATTCAGAGTGTTAA+AGG | + | chr1.3:3764961-3764980 | MS.gene67099:CDS | 35.0% |
| ! | TAGTTTGTGGATTAATCAGC+CGG | - | chr1.3:3765008-3765027 | None:intergenic | 35.0% |
| ! | TATTCAGAGTGTTAAAGGCA+AGG | + | chr1.3:3764966-3764985 | MS.gene67099:CDS | 35.0% |
| ! | TCATGATTTTTGCGCAATTC+AGG | + | chr1.3:3765872-3765891 | MS.gene67099:intron | 35.0% |
| ! | TCGTTGATGAGTATACTGTT+AGG | + | chr1.3:3762861-3762880 | MS.gene67099:CDS | 35.0% |
| ! | TTGGCAATTGCAAGTTTTTC+TGG | - | chr1.3:3765957-3765976 | None:intergenic | 35.0% |
| !! | CATAAGAAGAAATGGACTGA+TGG | + | chr1.3:3765281-3765300 | MS.gene67099:CDS | 35.0% |
| AAACCTTATCCCACTAAGTG+GGG | + | chr1.3:3764388-3764407 | MS.gene67099:intron | 40.0% | |
| AAGACACTCACTTGGATAGA+TGG | - | chr1.3:3765087-3765106 | None:intergenic | 40.0% | |
| ACGCGCTATGTCAAATATCT+AGG | - | chr1.3:3765537-3765556 | None:intergenic | 40.0% | |
| AGAACTAGGGATGATTGCAT+TGG | + | chr1.3:3763579-3763598 | MS.gene67099:intron | 40.0% | |
| ATAACAGCACTATCCACACA+AGG | - | chr1.3:3764852-3764871 | None:intergenic | 40.0% | |
| ATTGGTGCAAGCACTTGAAT+AGG | + | chr1.3:3764502-3764521 | MS.gene67099:intron | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | + | chr1.3:3764387-3764406 | MS.gene67099:intron | 40.0% | |
| CACACACTCACTGTAATCAA+AGG | + | chr1.3:3765831-3765850 | MS.gene67099:intron | 40.0% | |
| CATCCCAATCTAAGAATGTG+GGG | - | chr1.3:3764582-3764601 | None:intergenic | 40.0% | |
| CCAAATTAGAGATAGAGGGA+GGG | + | chr1.3:3763732-3763751 | MS.gene67099:intron | 40.0% | |
| CTATAGGCCAAACCATTAAG+AGG | + | chr1.3:3763764-3763783 | MS.gene67099:intron | 40.0% | |
| GACGTCCAAATTAGAGATAG+AGG | + | chr1.3:3763727-3763746 | MS.gene67099:intron | 40.0% | |
| GCAGACTAGAATCTTGCTTT+AGG | + | chr1.3:3763639-3763658 | MS.gene67099:intron | 40.0% | |
| GCGGAAAAGAGTTGAAACTT+TGG | + | chr1.3:3763878-3763897 | MS.gene67099:intron | 40.0% | |
| GGTGTACCTATGGAAGTTAT+GGG | + | chr1.3:3762821-3762840 | MS.gene67099:CDS | 40.0% | |
| TCAAACCTTATCCCACTAAG+TGG | + | chr1.3:3764386-3764405 | MS.gene67099:intron | 40.0% | |
| TCCAAATTAGAGATAGAGGG+AGG | + | chr1.3:3763731-3763750 | MS.gene67099:intron | 40.0% | |
| TGCCACATCTTCATAAGAGA+TGG | - | chr1.3:3763622-3763641 | None:intergenic | 40.0% | |
| TGGTGTACCTATGGAAGTTA+TGG | + | chr1.3:3762820-3762839 | MS.gene67099:CDS | 40.0% | |
| TGTGGACATTAACACACAAC+AGG | + | chr1.3:3764102-3764121 | MS.gene67099:CDS | 40.0% | |
| TTGGAGGTTCAATGCTACAA+CGG | - | chr1.3:3764542-3764561 | None:intergenic | 40.0% | |
| TTGTGTGTTAATGTCCACAC+CGG | - | chr1.3:3764101-3764120 | None:intergenic | 40.0% | |
| ! | AATATGATGATGAGCCTTGG+AGG | - | chr1.3:3764558-3764577 | None:intergenic | 40.0% |
| ! | GGTAATATGATGATGAGCCT+TGG | - | chr1.3:3764561-3764580 | None:intergenic | 40.0% |
| ! | TCCTTTTAGGCTCTTATCCA+TGG | + | chr1.3:3765182-3765201 | MS.gene67099:intron | 40.0% |
| ! | TGTGAACGATTTTGCTCACT+TGG | + | chr1.3:3765598-3765617 | MS.gene67099:intron | 40.0% |
| !! | AATAATGTCGGTTCAAGCCA+TGG | - | chr1.3:3765202-3765221 | None:intergenic | 40.0% |
| !! | GAGCATTTTGAGAAGAGCAA+GGG | - | chr1.3:3762675-3762694 | None:intergenic | 40.0% |
| !! | TGAGCATTTTGAGAAGAGCA+AGG | - | chr1.3:3762676-3762695 | None:intergenic | 40.0% |
| AAACCATTAAGCAACCCCTC+AGG | - | chr1.3:3765720-3765739 | None:intergenic | 45.0% | |
| AATTAGAGATAGAGGGAGGG+AGG | + | chr1.3:3763735-3763754 | MS.gene67099:intron | 45.0% | |
| AGCTGGGTGGTATAAACTTG+TGG | + | chr1.3:3764624-3764643 | MS.gene67099:intron | 45.0% | |
| AGGTGGTCATTGATGCTTTC+CGG | + | chr1.3:3764986-3765005 | MS.gene67099:CDS | 45.0% | |
| CCCTCCCTCTATCTCTAATT+TGG | - | chr1.3:3763735-3763754 | None:intergenic | 45.0% | |
| GCCATGGATAAGAGCCTAAA+AGG | - | chr1.3:3765186-3765205 | None:intergenic | 45.0% | |
| GTGAGTGTGTGTCTGTTCAA+TGG | - | chr1.3:3765822-3765841 | None:intergenic | 45.0% | |
| TACCAACCTACAACCATCTC+TGG | - | chr1.3:3764046-3764065 | None:intergenic | 45.0% | |
| TACTAGCAAGCTAGCTAGCT+GGG | + | chr1.3:3764608-3764627 | MS.gene67099:intron | 45.0% | |
| TGACCCAGCATCATAGTTTG+TGG | - | chr1.3:3765021-3765040 | None:intergenic | 45.0% | |
| TGCAAGCACTTGAATAGGAG+AGG | + | chr1.3:3764507-3764526 | MS.gene67099:intron | 45.0% | |
| TGGAGGTTCAATGCTACAAC+GGG | - | chr1.3:3764541-3764560 | None:intergenic | 45.0% | |
| TGTAGCCAACTTTACTTGGG+CGG | + | chr1.3:3763859-3763878 | MS.gene67099:intron | 45.0% | |
| TTAGATGAGTTGTGTCTCGG+AGG | + | chr1.3:3763103-3763122 | MS.gene67099:intron | 45.0% | |
| TTAGATGAGTTTGGTCTCGG+AGG | + | chr1.3:3763209-3763228 | MS.gene67099:intron | 45.0% | |
| TTGCAATTGCCAATGTCGGA+AGG | + | chr1.3:3765964-3765983 | MS.gene67099:CDS | 45.0% | |
| TTGCTCAGATGAATCTAGGG+TGG | - | chr1.3:3762639-3762658 | None:intergenic | 45.0% | |
| TTGGTGAATTTAGGTAGGGC+TGG | + | chr1.3:3762800-3762819 | MS.gene67099:intron | 45.0% | |
| TTTCTGTTTCAGGCCAGAGA+TGG | + | chr1.3:3764030-3764049 | MS.gene67099:intron | 45.0% | |
| ! | CTTTTCCGCCCAAGTAAAGT+TGG | - | chr1.3:3763867-3763886 | None:intergenic | 45.0% |
| ! | GGTTGGTATCATTCACATCC+TGG | + | chr1.3:3764058-3764077 | MS.gene67099:CDS | 45.0% |
| ! | GTTGTAGCATTGAACCTCCA+AGG | + | chr1.3:3764541-3764560 | MS.gene67099:intron | 45.0% |
| ! | TCAGAGTGTTAAAGGCAAGG+TGG | + | chr1.3:3764969-3764988 | MS.gene67099:CDS | 45.0% |
| ! | TGCTCAGATGAATCTAGGGT+GGG | - | chr1.3:3762638-3762657 | None:intergenic | 45.0% |
| !! | ATCCACACAAGGCATTGTCA+TGG | - | chr1.3:3764841-3764860 | None:intergenic | 45.0% |
| !! | GGATAGATGGCTTGTTCAGA+TGG | - | chr1.3:3765074-3765093 | None:intergenic | 45.0% |
| !! | GTTTTTGCTATGCCTCAGAG+TGG | + | chr1.3:3762893-3762912 | MS.gene67099:CDS | 45.0% |
| AAGTTGGAGGTTGTCTGTCG+CGG | - | chr1.3:3765048-3765067 | None:intergenic | 50.0% | |
| AATTGCCAATGTCGGAAGGC+AGG | + | chr1.3:3765968-3765987 | MS.gene67099:CDS | 50.0% | |
| ACTAAGTGGGGTCAGGTACA+TGG | + | chr1.3:3764400-3764419 | MS.gene67099:intron | 50.0% | |
| AGACCTGAGGGGTTGCTTAA+TGG | + | chr1.3:3765714-3765733 | MS.gene67099:intron | 50.0% | |
| AGCCATGACAATGCCTTGTG+TGG | + | chr1.3:3764836-3764855 | MS.gene67099:intron | 50.0% | |
| ATGTACCTGACCCCACTTAG+TGG | - | chr1.3:3764401-3764420 | None:intergenic | 50.0% | |
| ATGTTGTGGGTGTAGACCTG+AGG | + | chr1.3:3765701-3765720 | MS.gene67099:intron | 50.0% | |
| CAAAGAATGTTTGCGGGTGC+AGG | + | chr1.3:3762578-3762597 | MS.gene67099:CDS | 50.0% | |
| CAAGTACAACAAGGCAGTGC+AGG | + | chr1.3:3765914-3765933 | MS.gene67099:CDS | 50.0% | |
| CGACAGACAACCTCCAACTT+GGG | + | chr1.3:3765048-3765067 | MS.gene67099:CDS | 50.0% | |
| CTAACACCAGTACCACTCTG+AGG | - | chr1.3:3762908-3762927 | None:intergenic | 50.0% | |
| CTACTAGCAAGCTAGCTAGC+TGG | + | chr1.3:3764607-3764626 | MS.gene67099:intron | 50.0% | |
| CTTGTTCAGATGGCCCAAGT+TGG | - | chr1.3:3765064-3765083 | None:intergenic | 50.0% | |
| GGACTGATGGTTTGACACTC+AGG | + | chr1.3:3765294-3765313 | MS.gene67099:CDS | 50.0% | |
| GGGAGGGAGGAACTTTCTAT+AGG | + | chr1.3:3763748-3763767 | MS.gene67099:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | - | chr1.3:3764394-3764413 | None:intergenic | 50.0% | |
| TGTACCTGACCCCACTTAGT+GGG | - | chr1.3:3764400-3764419 | None:intergenic | 50.0% | |
| TGTTGTGGGTGTAGACCTGA+GGG | + | chr1.3:3765702-3765721 | MS.gene67099:intron | 50.0% | |
| TTATCCCACTAAGTGGGGTC+AGG | + | chr1.3:3764393-3764412 | MS.gene67099:intron | 50.0% | |
| TTCAGGCCAGAGATGGTTGT+AGG | + | chr1.3:3764037-3764056 | MS.gene67099:intron | 50.0% | |
| ! | CTCAGATGAATCTAGGGTGG+GGG | - | chr1.3:3762636-3762655 | None:intergenic | 50.0% |
| ! | CTGCACTGCCTTGTTGTACT+TGG | - | chr1.3:3765916-3765935 | None:intergenic | 50.0% |
| ! | GCTCAGATGAATCTAGGGTG+GGG | - | chr1.3:3762637-3762656 | None:intergenic | 50.0% |
| !! | GGATGCTAAGAAGCACCTTG+AGG | + | chr1.3:3765989-3766008 | MS.gene67099:CDS | 50.0% |
| !! | GGCTTTAAATCAACGGGCAG+TGG | + | chr1.3:3764927-3764946 | MS.gene67099:CDS | 50.0% |
| ACTGCGCTCTTTGAGCCTCA+AGG | - | chr1.3:3763255-3763274 | None:intergenic | 55.0% | |
| AGAATGTTTGCGGGTGCAGG+TGG | + | chr1.3:3762581-3762600 | MS.gene67099:CDS | 55.0% | |
| AGCATCCTGCCTTCCGACAT+TGG | - | chr1.3:3765976-3765995 | None:intergenic | 55.0% | |
| CACATCCTGGATTTGGCTGC+TGG | + | chr1.3:3764071-3764090 | MS.gene67099:CDS | 55.0% | |
| GAAAGCCAGCAGCCAAATCC+AGG | - | chr1.3:3764079-3764098 | None:intergenic | 55.0% | |
| GCGACAGACAACCTCCAACT+TGG | + | chr1.3:3765047-3765066 | MS.gene67099:CDS | 55.0% | |
| GCTATGCCTCAGAGTGGTAC+TGG | + | chr1.3:3762899-3762918 | MS.gene67099:CDS | 55.0% | |
| GGCCAGAGATGGTTGTAGGT+TGG | + | chr1.3:3764041-3764060 | MS.gene67099:intron | 55.0% | |
| GTACAACAAGGCAGTGCAGG+AGG | + | chr1.3:3765917-3765936 | MS.gene67099:CDS | 55.0% | |
| GTTGTGGGTGTAGACCTGAG+GGG | + | chr1.3:3765703-3765722 | MS.gene67099:intron | 55.0% | |
| TAGCAAGCTAGCTAGCTGGG+TGG | + | chr1.3:3764611-3764630 | MS.gene67099:intron | 55.0% | |
| TCGGAGGCTCACTTGGGTTA+GGG | + | chr1.3:3763225-3763244 | MS.gene67099:intron | 55.0% | |
| TTGGTCTCGGAGGCTCACTT+GGG | + | chr1.3:3763219-3763238 | MS.gene67099:intron | 55.0% | |
| TTTGGTCTCGGAGGCTCACT+TGG | + | chr1.3:3763218-3763237 | MS.gene67099:intron | 55.0% | |
| ! | AGGCTCACTTGGGTTAGGGA+AGG | + | chr1.3:3763229-3763248 | MS.gene67099:intron | 55.0% |
| ! | AGGTAGGGCTGGTGTACCTA+TGG | + | chr1.3:3762811-3762830 | MS.gene67099:intron | 55.0% |
| ! | GAATCTAGGGTGGGGGAATC+CGG | - | chr1.3:3762629-3762648 | None:intergenic | 55.0% |
| ! | GTTCAGATGGCCCAAGTTGG+AGG | - | chr1.3:3765061-3765080 | None:intergenic | 55.0% |
| ! | TTGGGTTAGGGAAGGCCTTG+AGG | + | chr1.3:3763237-3763256 | MS.gene67099:intron | 55.0% |
| !! | GGATTTGGCTGCTGGCTTTC+CGG | + | chr1.3:3764079-3764098 | MS.gene67099:CDS | 55.0% |
| CATGAAGCCTGCCCTGATCC+GGG | - | chr1.3:3763133-3763152 | None:intergenic | 60.0% | |
| CCATGAAGCCTGCCCTGATC+CGG | - | chr1.3:3763134-3763153 | None:intergenic | 60.0% | |
| CTCGGAGGCTCACTTGGGTT+AGG | + | chr1.3:3763224-3763243 | MS.gene67099:intron | 60.0% | |
| TTGTGTCTCGGAGGCTCACC+CGG | + | chr1.3:3763112-3763131 | MS.gene67099:intron | 60.0% | |
| ACTCGGCGGTCATCCACCAC+CGG | + | chr1.3:3762607-3762626 | MS.gene67099:CDS | 65.0% | |
| CCGGATCAGGGCAGGCTTCA+TGG | + | chr1.3:3763131-3763150 | MS.gene67099:intron | 65.0% | |
| TCAACGGGCAGTGGCTGTCG+TGG | + | chr1.3:3764936-3764955 | MS.gene67099:CDS | 65.0% | |
| TCGGAGGCTCACCCGGATCA+GGG | + | chr1.3:3763119-3763138 | MS.gene67099:intron | 65.0% | |
| ! | TCTAGGGTGGGGGAATCCGG+TGG | - | chr1.3:3762626-3762645 | None:intergenic | 65.0% |
| !! | TGGCTGCTGGCTTTCCGGTG+TGG | + | chr1.3:3764084-3764103 | MS.gene67099:CDS | 65.0% |
| ACGGGCAGTGGCTGTCGTGG+TGG | + | chr1.3:3764939-3764958 | MS.gene67099:CDS | 70.0% | |
| AGGCTCACCCGGATCAGGGC+AGG | + | chr1.3:3763123-3763142 | MS.gene67099:intron | 70.0% | |
| AGGGTGGGGGAATCCGGTGG+TGG | - | chr1.3:3762623-3762642 | None:intergenic | 70.0% | |
| CTCGGAGGCTCACCCGGATC+AGG | + | chr1.3:3763118-3763137 | MS.gene67099:intron | 70.0% | |
| ! | GCGGGTGCAGGTGGAGCACT+CGG | + | chr1.3:3762590-3762609 | MS.gene67099:CDS | 70.0% |
| ! | GGTGCAGGTGGAGCACTCGG+CGG | + | chr1.3:3762593-3762612 | MS.gene67099:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 3762557 | 3766085 | 3762557 | ID=MS.gene67099 |
| chr1.3 | mRNA | 3762557 | 3766085 | 3762557 | ID=MS.gene67099.t1;Parent=MS.gene67099 |
| chr1.3 | exon | 3762557 | 3762701 | 3762557 | ID=MS.gene67099.t1.exon1;Parent=MS.gene67099.t1 |
| chr1.3 | CDS | 3762557 | 3762701 | 3762557 | ID=cds.MS.gene67099.t1;Parent=MS.gene67099.t1 |
| chr1.3 | exon | 3762813 | 3762990 | 3762813 | ID=MS.gene67099.t1.exon2;Parent=MS.gene67099.t1 |
| chr1.3 | CDS | 3762813 | 3762990 | 3762813 | ID=cds.MS.gene67099.t1;Parent=MS.gene67099.t1 |
| chr1.3 | exon | 3764042 | 3764123 | 3764042 | ID=MS.gene67099.t1.exon3;Parent=MS.gene67099.t1 |
| chr1.3 | CDS | 3764042 | 3764123 | 3764042 | ID=cds.MS.gene67099.t1;Parent=MS.gene67099.t1 |
| chr1.3 | exon | 3764919 | 3765095 | 3764919 | ID=MS.gene67099.t1.exon4;Parent=MS.gene67099.t1 |
| chr1.3 | CDS | 3764919 | 3765095 | 3764919 | ID=cds.MS.gene67099.t1;Parent=MS.gene67099.t1 |
| chr1.3 | exon | 3765191 | 3765358 | 3765191 | ID=MS.gene67099.t1.exon5;Parent=MS.gene67099.t1 |
| chr1.3 | CDS | 3765191 | 3765358 | 3765191 | ID=cds.MS.gene67099.t1;Parent=MS.gene67099.t1 |
| chr1.3 | exon | 3765894 | 3766085 | 3765894 | ID=MS.gene67099.t1.exon6;Parent=MS.gene67099.t1 |
| chr1.3 | CDS | 3765894 | 3766085 | 3765894 | ID=cds.MS.gene67099.t1;Parent=MS.gene67099.t1 |
| Gene Sequence |
| Protein sequence |
