Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98447.t1 | XP_003612702.1 | 98.4 | 386 | 6 | 0 | 1 | 386 | 1 | 386 | 5.80E-210 | 740 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98447.t1 | Q8GYA6 | 83.4 | 386 | 64 | 0 | 1 | 386 | 1 | 386 | 4.2e-185 | 648.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98447.t1 | G7K9K1 | 98.4 | 386 | 6 | 0 | 1 | 386 | 1 | 386 | 4.2e-210 | 740.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031999 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene004328 | PPI |
| MS.gene69251 | MS.gene98447 | PPI |
| MS.gene67099 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene56675 | PPI |
| MS.gene98447 | MS.gene80790 | PPI |
| MS.gene72902 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene028013 | PPI |
| MS.gene98447 | MS.gene030685 | PPI |
| MS.gene98447 | MS.gene29607 | PPI |
| MS.gene98447 | MS.gene24375 | PPI |
| MS.gene58134 | MS.gene98447 | PPI |
| MS.gene69716 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene58136 | PPI |
| MS.gene28183 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene030686 | PPI |
| MS.gene72901 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene002648 | PPI |
| MS.gene044013 | MS.gene98447 | PPI |
| MS.gene062770 | MS.gene98447 | PPI |
| MS.gene008081 | MS.gene98447 | PPI |
| MS.gene057320 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene80661 | PPI |
| MS.gene28454 | MS.gene98447 | PPI |
| MS.gene98447 | MS.gene70283 | PPI |
| MS.gene98447 | MS.gene70282 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98447.t1 | MTR_5g027960 | 98.446 | 386 | 6 | 0 | 1 | 386 | 1 | 386 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98447.t1 | AT4G19006 | 83.420 | 386 | 64 | 0 | 1 | 386 | 1 | 386 | 0.0 | 678 |
| MS.gene98447.t1 | AT5G45620 | 82.902 | 386 | 66 | 0 | 1 | 386 | 1 | 386 | 0.0 | 675 |
| MS.gene98447.t1 | AT4G19006 | 73.349 | 439 | 64 | 1 | 1 | 386 | 1 | 439 | 0.0 | 654 |
| MS.gene98447.t1 | AT5G45620 | 84.472 | 322 | 50 | 0 | 1 | 322 | 1 | 322 | 0.0 | 571 |
Find 86 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGTGCTCTTCTCTATT+TGG | 0.148267 | 5.4:+18692891 | MS.gene98447:CDS |
| TGCAAGAATCTTCTGGAAAA+TGG | 0.170541 | 5.4:+18692760 | MS.gene98447:CDS |
| CGACAGATTAAGAGCCTTCT+AGG | 0.213556 | 5.4:+18694061 | MS.gene98447:intron |
| GCAGAAACACCTGATTTAAT+TGG | 0.231748 | 5.4:+18695332 | MS.gene98447:CDS |
| CTTGTCCCTTTCTGCTCTGC+TGG | 0.238406 | 5.4:+18693908 | MS.gene98447:CDS |
| CAACTTGAGAAGGTTGATTT+TGG | 0.244421 | 5.4:-18692560 | None:intergenic |
| GGCATTTAATTCTGGTGATT+TGG | 0.264559 | 5.4:+18694117 | MS.gene98447:CDS |
| ATTCTGCAGGCATTTAATTC+TGG | 0.267062 | 5.4:+18694109 | MS.gene98447:CDS |
| CTGTGTATGCGAGCTATTAC+TGG | 0.301939 | 5.4:+18692821 | MS.gene98447:CDS |
| CTGGGTGCAACCAAGAGTTC+TGG | 0.325908 | 5.4:+18695229 | MS.gene98447:CDS |
| GAAGATTCTTGCATTCCTTT+TGG | 0.328435 | 5.4:-18692750 | None:intergenic |
| AGGGCACAGTACATGTTTCC+TGG | 0.330946 | 5.4:+18695210 | MS.gene98447:CDS |
| TTGTACCATTCACCGAGTTC+AGG | 0.331765 | 5.4:-18690935 | None:intergenic |
| ACCTTGCTCAAGCTTGAATA+AGG | 0.333906 | 5.4:-18692725 | None:intergenic |
| AAAGGAATGCAAGAATCTTC+TGG | 0.334571 | 5.4:+18692753 | MS.gene98447:CDS |
| GGCTATTTGCAGCCGGCCTT+CGG | 0.343497 | 5.4:+18694352 | MS.gene98447:intron |
| CAATTTGCATCTTAATGTAT+AGG | 0.364510 | 5.4:-18692702 | None:intergenic |
| ATTCCACCTTTGACCCTAGA+AGG | 0.376256 | 5.4:-18694075 | None:intergenic |
| GCTGATGCCATAACTTCTTC+TGG | 0.398801 | 5.4:-18690976 | None:intergenic |
| TTGTCCCTTTCTGCTCTGCT+GGG | 0.405367 | 5.4:+18693909 | MS.gene98447:CDS |
| TTGAACAGATAAAATCATTA+CGG | 0.413527 | 5.4:+18695255 | MS.gene98447:CDS |
| GCAAGAATCTTCTGGAAAAT+GGG | 0.416747 | 5.4:+18692761 | MS.gene98447:CDS |
| GGGGATAACATCTACAACTT+TGG | 0.433711 | 5.4:+18693930 | MS.gene98447:CDS |
| GTCTGATGGAAATTATATTC+AGG | 0.441429 | 5.4:+18694242 | MS.gene98447:CDS |
| TGAACAGATAAAATCATTAC+GGG | 0.441642 | 5.4:+18695256 | MS.gene98447:CDS |
| ATTCACGATCCAATTAAATC+AGG | 0.446172 | 5.4:-18695341 | None:intergenic |
| TTCCAGGTTCATCTGATTGA+GGG | 0.450314 | 5.4:+18695170 | MS.gene98447:intron |
| TGTTCAATACCCAGAACTCT+TGG | 0.469920 | 5.4:-18695239 | None:intergenic |
| TGGGTGCAACCAAGAGTTCT+GGG | 0.471407 | 5.4:+18695230 | MS.gene98447:CDS |
| ATTCCAGGTTCATCTGATTG+AGG | 0.471689 | 5.4:+18695169 | MS.gene98447:intron |
| GCTGCCATTGGTTATCTTGA+AGG | 0.473495 | 5.4:+18692628 | MS.gene98447:CDS |
| AAAATCATTACGGGATCGAT+TGG | 0.484091 | 5.4:+18695265 | MS.gene98447:CDS |
| CTGCCATTGGTTATCTTGAA+GGG | 0.488971 | 5.4:+18692629 | MS.gene98447:CDS |
| TTACAGACAGGCTCTTCATA+AGG | 0.489578 | 5.4:-18694445 | None:intergenic |
| TGTACCATTCACCGAGTTCA+GGG | 0.493012 | 5.4:-18690934 | None:intergenic |
| TACGGGATCGATTGGACGGT+TGG | 0.493967 | 5.4:+18695273 | MS.gene98447:CDS |
| ATCTGTACCAGAAGAAGTTA+TGG | 0.497476 | 5.4:+18690969 | MS.gene98447:CDS |
| CTCACCCTGAACTCGGTGAA+TGG | 0.501156 | 5.4:+18690930 | MS.gene98447:CDS |
| ATCAGGTGTTTCTGCCTCGA+TGG | 0.508687 | 5.4:-18695324 | None:intergenic |
| GATCAACATTCTGTGTCTGA+TGG | 0.511761 | 5.4:+18694228 | MS.gene98447:CDS |
| TCAATATCACAAATCCCGTC+AGG | 0.511791 | 5.4:+18692852 | MS.gene98447:CDS |
| TGTCCCTTTCTGCTCTGCTG+GGG | 0.512089 | 5.4:+18693910 | MS.gene98447:CDS |
| GCTTGAGCAAGGTGACCAAA+AGG | 0.513089 | 5.4:+18692735 | MS.gene98447:CDS |
| GATCGATTGGACGGTTGGAC+CGG | 0.514901 | 5.4:+18695278 | MS.gene98447:CDS |
| TGTAAATACTCACAATAGGA+TGG | 0.517964 | 5.4:-18693965 | None:intergenic |
| GTCCCTTTCTGCTCTGCTGG+GGG | 0.520589 | 5.4:+18693911 | MS.gene98447:CDS |
| CAAAATCAACCTTCTCAAGT+TGG | 0.525565 | 5.4:+18692561 | MS.gene98447:CDS |
| GCCTTATTCAAGCTTGAGCA+AGG | 0.527580 | 5.4:+18692724 | MS.gene98447:CDS |
| GAGAACTTCGAAGCGATTCA+AGG | 0.528592 | 5.4:-18690910 | None:intergenic |
| TCAAAATGAACAGAAGCTGT+TGG | 0.529532 | 5.4:+18694201 | MS.gene98447:CDS |
| GGGCACAGTACATGTTTCCT+GGG | 0.529779 | 5.4:+18695211 | MS.gene98447:CDS |
| CGAAGTTCTCACCCTGAACT+CGG | 0.534607 | 5.4:+18690923 | MS.gene98447:CDS |
| TCGATATCAAGAATTATGTC+AGG | 0.541395 | 5.4:+18694141 | MS.gene98447:CDS |
| TTCTAGGGTCAAAGGTGGAA+TGG | 0.543964 | 5.4:+18694077 | MS.gene98447:CDS |
| TAGTTCGATCTTCCGAAGGC+CGG | 0.546687 | 5.4:-18694364 | None:intergenic |
| CGCTCTGCAATAACACTCAA+GGG | 0.547253 | 5.4:-18694389 | None:intergenic |
| TTCTATGCGCTGCTCTCTAG+TGG | 0.551669 | 5.4:-18692671 | None:intergenic |
| TCTGAGAAAGAAGCTGCCAT+TGG | 0.552784 | 5.4:+18692616 | MS.gene98447:CDS |
| AAGGTATTGCAGTGCAGCCA+TGG | 0.555178 | 5.4:-18690891 | None:intergenic |
| TGAGGGTATAATTGATCAAG+TGG | 0.558787 | 5.4:+18695187 | MS.gene98447:CDS |
| CAAAATGCGCCAACTTGAGA+AGG | 0.559547 | 5.4:-18692570 | None:intergenic |
| ATGGCTCTACTATATTCTGC+AGG | 0.565593 | 5.4:+18694096 | MS.gene98447:CDS |
| TAAGAGCCTTCTAGGGTCAA+AGG | 0.566643 | 5.4:+18694069 | MS.gene98447:CDS |
| GACAGATTAAGAGCCTTCTA+GGG | 0.570757 | 5.4:+18694062 | MS.gene98447:intron |
| GTAAATACTCACAATAGGAT+GGG | 0.577630 | 5.4:-18693964 | None:intergenic |
| TTGCTGTGATGGTTTCTCGA+CGG | 0.578421 | 5.4:+18692590 | MS.gene98447:CDS |
| TCGCTCTGCAATAACACTCA+AGG | 0.579629 | 5.4:-18694390 | None:intergenic |
| TGCATCTTAATGTATAGGAT+AGG | 0.580855 | 5.4:-18692697 | None:intergenic |
| ACAACTTTCTATAGAGAATG+TGG | 0.583087 | 5.4:+18694415 | MS.gene98447:CDS |
| TCTCTCTGACTCATTCAAGC+TGG | 0.583254 | 5.4:+18692933 | MS.gene98447:CDS |
| AAACTCAGCAAATTCCTGAC+GGG | 0.585720 | 5.4:-18692866 | None:intergenic |
| TGCCATTGGTTATCTTGAAG+GGG | 0.587336 | 5.4:+18692630 | MS.gene98447:CDS |
| TAATAGCTCGCATACACAGT+TGG | 0.595991 | 5.4:-18692817 | None:intergenic |
| CTATTTGGCATACACATCAG+TGG | 0.599964 | 5.4:+18692906 | MS.gene98447:CDS |
| TGTGTATGCGAGCTATTACT+GGG | 0.603316 | 5.4:+18692822 | MS.gene98447:CDS |
| TCATTACGGGATCGATTGGA+CGG | 0.617967 | 5.4:+18695269 | MS.gene98447:CDS |
| GACCCCTTCAAGATAACCAA+TGG | 0.621964 | 5.4:-18692632 | None:intergenic |
| AAAACTCAGCAAATTCCTGA+CGG | 0.624927 | 5.4:-18692867 | None:intergenic |
| GGTATAATTGATCAAGTGGA+GGG | 0.641521 | 5.4:+18695191 | MS.gene98447:CDS |
| GGAATAGTTCGATCTTCCGA+AGG | 0.642595 | 5.4:-18694368 | None:intergenic |
| GGGTATAATTGATCAAGTGG+AGG | 0.645121 | 5.4:+18695190 | MS.gene98447:CDS |
| CGCGGCGTTGTTGTCCATCG+AGG | 0.648030 | 5.4:+18695310 | MS.gene98447:CDS |
| GAGCCTTCTAGGGTCAAAGG+TGG | 0.657107 | 5.4:+18694072 | MS.gene98447:CDS |
| TGAATGGTACAATTCTCTTG+CGG | 0.666797 | 5.4:+18690946 | MS.gene98447:CDS |
| CAGAACTCTTGGTTGCACCC+AGG | 0.676624 | 5.4:-18695228 | None:intergenic |
| TTGGACCGGAAAAGTACACG+CGG | 0.778962 | 5.4:+18695292 | MS.gene98447:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CACTTTTTATTATATTATTA+TGG | + | chr5.4:18691549-18691568 | MS.gene98447:intron | 10.0% |
| !! | AGTAACAAAAATTAAACAAT+TGG | - | chr5.4:18691080-18691099 | None:intergenic | 15.0% |
| !! | ATAATTATGAAAAACCAATT+AGG | - | chr5.4:18693664-18693683 | None:intergenic | 15.0% |
| !! | CGATATATAAATTCAAAAAA+GGG | + | chr5.4:18693452-18693471 | MS.gene98447:intron | 15.0% |
| !! | GTGTATTAATTTAATAAGTA+AGG | - | chr5.4:18693727-18693746 | None:intergenic | 15.0% |
| !! | GTTTATAATTATTTGTTTGA+CGG | + | chr5.4:18692464-18692483 | MS.gene98447:intron | 15.0% |
| !! | TACTTATTAAATTAATACAC+AGG | + | chr5.4:18693727-18693746 | MS.gene98447:intron | 15.0% |
| !!! | CCTTTTTTGAATTTATATAT+CGG | - | chr5.4:18693454-18693473 | None:intergenic | 15.0% |
| !!! | GTTATGTTTTTATTGAAAAT+TGG | + | chr5.4:18693763-18693782 | MS.gene98447:intron | 15.0% |
| !!! | TCTATTTTGTTTTGTTTTTT+AGG | + | chr5.4:18691191-18691210 | MS.gene98447:intron | 15.0% |
| !!! | TGCTTTTATTTTTTGTATTT+TGG | + | chr5.4:18694822-18694841 | MS.gene98447:intron | 15.0% |
| !!! | TGTATATGAAATTGAATTTT+TGG | + | chr5.4:18691325-18691344 | MS.gene98447:intron | 15.0% |
| !! | AATGTATAAGAGAAACTATT+AGG | + | chr5.4:18691920-18691939 | MS.gene98447:intron | 20.0% |
| !! | ACTAAAATCAAATGACAATT+TGG | - | chr5.4:18692261-18692280 | None:intergenic | 20.0% |
| !! | ATAAAAATATTAGACAGGAA+TGG | - | chr5.4:18692099-18692118 | None:intergenic | 20.0% |
| !! | ATGTGATAAAAATATTAGAC+AGG | - | chr5.4:18692104-18692123 | None:intergenic | 20.0% |
| !! | ATTAGAAGAAATAAGAAACA+GGG | - | chr5.4:18692385-18692404 | None:intergenic | 20.0% |
| !! | CAAAATTTCAACATTAACAA+TGG | - | chr5.4:18694898-18694917 | None:intergenic | 20.0% |
| !! | CATTTATAAAAAGATTGCAA+GGG | - | chr5.4:18691675-18691694 | None:intergenic | 20.0% |
| !! | CCGATATATAAATTCAAAAA+AGG | + | chr5.4:18693451-18693470 | MS.gene98447:intron | 20.0% |
| !! | TAATCTACTAAAGAATCTAA+AGG | - | chr5.4:18691835-18691854 | None:intergenic | 20.0% |
| !! | TATATGAACAAATTTATTCC+AGG | + | chr5.4:18695154-18695173 | MS.gene98447:intron | 20.0% |
| !! | TATTAGAAGAAATAAGAAAC+AGG | - | chr5.4:18692386-18692405 | None:intergenic | 20.0% |
| !! | TTGAACAGATAAAATCATTA+CGG | + | chr5.4:18695255-18695274 | MS.gene98447:CDS | 20.0% |
| !! | TTTGCGGTTTATTAAAATTA+GGG | + | chr5.4:18691110-18691129 | MS.gene98447:intron | 20.0% |
| !!! | AACTAATTCAAAAGTAGTTT+TGG | - | chr5.4:18693314-18693333 | None:intergenic | 20.0% |
| !!! | ACTAATTCAAAAGTAGTTTT+GGG | - | chr5.4:18693313-18693332 | None:intergenic | 20.0% |
| !!! | ATTGTCATTTGATTTTAGTT+CGG | + | chr5.4:18692262-18692281 | MS.gene98447:intron | 20.0% |
| !!! | ATTTTGGGTTTTTTTTGTTT+TGG | + | chr5.4:18691388-18691407 | MS.gene98447:intron | 20.0% |
| !!! | CAAATTTTGCTATTCAAATT+TGG | + | chr5.4:18694794-18694813 | MS.gene98447:intron | 20.0% |
| !!! | CATTGTTAATGTTGAAATTT+TGG | + | chr5.4:18694896-18694915 | MS.gene98447:intron | 20.0% |
| !!! | GCAAACTTCTTTTTTTAAAA+TGG | - | chr5.4:18695085-18695104 | None:intergenic | 20.0% |
| !!! | GGAATAAATTTGTTCATATA+AGG | - | chr5.4:18695154-18695173 | None:intergenic | 20.0% |
| !!! | GTTACTTAGTTTTAATTTTG+CGG | + | chr5.4:18691094-18691113 | MS.gene98447:intron | 20.0% |
| !!! | GTTTCTCTTATACATTTTAT+AGG | - | chr5.4:18691916-18691935 | None:intergenic | 20.0% |
| !!! | TATTATTATGGTTTGAGATA+TGG | + | chr5.4:18691561-18691580 | MS.gene98447:intron | 20.0% |
| !!! | TTGGATTTGTTTTTTTGTTT+GGG | + | chr5.4:18691407-18691426 | MS.gene98447:intron | 20.0% |
| !!! | TTTGGATTTGTTTTTTTGTT+TGG | + | chr5.4:18691406-18691425 | MS.gene98447:intron | 20.0% |
| !!! | TTTGTTTTTTAGGATTTGAT+TGG | + | chr5.4:18691201-18691220 | MS.gene98447:intron | 20.0% |
| !!! | TTTTGCGGTTTATTAAAATT+AGG | + | chr5.4:18691109-18691128 | MS.gene98447:intron | 20.0% |
| !!! | TTTTTTAAATGCTTCTTATC+TGG | + | chr5.4:18693994-18694013 | MS.gene98447:intron | 20.0% |
| ! | AATACACAGGACTTATAATA+AGG | + | chr5.4:18693740-18693759 | MS.gene98447:intron | 25.0% |
| ! | AATTAGGGTTTCTGTTAATT+TGG | + | chr5.4:18691125-18691144 | MS.gene98447:intron | 25.0% |
| ! | AATTATCACACTAAAAGTCA+TGG | - | chr5.4:18692417-18692436 | None:intergenic | 25.0% |
| ! | ACTTCACAAACAAAACAAAA+AGG | - | chr5.4:18695107-18695126 | None:intergenic | 25.0% |
| ! | ATAAAATCCAGATTGATAAG+GGG | - | chr5.4:18693105-18693124 | None:intergenic | 25.0% |
| ! | ATACACAGGACTTATAATAA+GGG | + | chr5.4:18693741-18693760 | MS.gene98447:intron | 25.0% |
| ! | ATATTAGTTAATGCAGGATT+TGG | + | chr5.4:18693878-18693897 | MS.gene98447:intron | 25.0% |
| ! | ATCCTTAATTATGAACATCT+AGG | - | chr5.4:18695016-18695035 | None:intergenic | 25.0% |
| ! | ATGATGTAAATACTCACAAT+AGG | - | chr5.4:18693972-18693991 | None:intergenic | 25.0% |
| ! | ATTAGGGTTTCTGTTAATTT+GGG | + | chr5.4:18691126-18691145 | MS.gene98447:intron | 25.0% |
| ! | CAATTTGCATCTTAATGTAT+AGG | - | chr5.4:18692705-18692724 | None:intergenic | 25.0% |
| ! | CAGAAGAATCAACTTAATTT+AGG | - | chr5.4:18694729-18694748 | None:intergenic | 25.0% |
| ! | CATAAAATCCAGATTGATAA+GGG | - | chr5.4:18693106-18693125 | None:intergenic | 25.0% |
| ! | CCATTTATAAAAAGATTGCA+AGG | - | chr5.4:18691676-18691695 | None:intergenic | 25.0% |
| ! | GAAAAAAATCATAGACAAGT+TGG | - | chr5.4:18693840-18693859 | None:intergenic | 25.0% |
| ! | GATATGATATTAGTTAATGC+AGG | + | chr5.4:18693872-18693891 | MS.gene98447:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr5.4:18691973-18691992 | None:intergenic | 25.0% |
| ! | TACCTAGATGTTCATAATTA+AGG | + | chr5.4:18695011-18695030 | MS.gene98447:intron | 25.0% |
| ! | TAGCAAAATTTGTCATTAGA+TGG | - | chr5.4:18694786-18694805 | None:intergenic | 25.0% |
| ! | TCTAAACATAGATTGAACAA+TGG | - | chr5.4:18692187-18692206 | None:intergenic | 25.0% |
| ! | TGAACAGATAAAATCATTAC+GGG | + | chr5.4:18695256-18695275 | MS.gene98447:CDS | 25.0% |
| ! | TGATCAAGTGTATCATAAAT+TGG | + | chr5.4:18691702-18691721 | MS.gene98447:intron | 25.0% |
| ! | TTAACTAATATCATATCTGC+TGG | - | chr5.4:18693869-18693888 | None:intergenic | 25.0% |
| ! | TTTATTTCCAACTCAATTGA+TGG | + | chr5.4:18694328-18694347 | MS.gene98447:intron | 25.0% |
| !! | CCTTGCAATCTTTTTATAAA+TGG | + | chr5.4:18691673-18691692 | MS.gene98447:intron | 25.0% |
| !! | TTGTTGGAAACTGAAATTTT+GGG | + | chr5.4:18691373-18691392 | MS.gene98447:intron | 25.0% |
| !! | TTTGTTGGAAACTGAAATTT+TGG | + | chr5.4:18691372-18691391 | MS.gene98447:intron | 25.0% |
| !!! | AAATTGAATTTTTGGTGTTG+GGG | + | chr5.4:18691333-18691352 | MS.gene98447:intron | 25.0% |
| !!! | AACTTTAAGGTACTTTCTAA+TGG | - | chr5.4:18693489-18693508 | None:intergenic | 25.0% |
| !!! | ATTTAGAATTAGGGTTTTGT+TGG | + | chr5.4:18691357-18691376 | MS.gene98447:intron | 25.0% |
| !!! | GAAATTGAATTTTTGGTGTT+GGG | + | chr5.4:18691332-18691351 | MS.gene98447:intron | 25.0% |
| !!! | TCGGCTTATGTAATTTTTTA+AGG | + | chr5.4:18694607-18694626 | MS.gene98447:intron | 25.0% |
| !!! | TGAAATTGAATTTTTGGTGT+TGG | + | chr5.4:18691331-18691350 | MS.gene98447:intron | 25.0% |
| !!! | TGGATTTGTTTTTTTGTTTG+GGG | + | chr5.4:18691408-18691427 | MS.gene98447:intron | 25.0% |
| !!! | TTTTGTTTTGTTTGTGAAGT+TGG | + | chr5.4:18695107-18695126 | MS.gene98447:intron | 25.0% |
| AATCAAATGACAATTTGGAC+TGG | - | chr5.4:18692256-18692275 | None:intergenic | 30.0% | |
| ACAACTTTCTATAGAGAATG+TGG | + | chr5.4:18694415-18694434 | MS.gene98447:CDS | 30.0% | |
| AGATTTAGAGATCAATGAGT+TGG | + | chr5.4:18691945-18691964 | MS.gene98447:intron | 30.0% | |
| AGCCAAAATATCTACATCTT+TGG | - | chr5.4:18691636-18691655 | None:intergenic | 30.0% | |
| ATAAGAAACAGGGATATCAA+TGG | - | chr5.4:18692375-18692394 | None:intergenic | 30.0% | |
| ATATAGTAGTTATGCAACAC+AGG | + | chr5.4:18693207-18693226 | MS.gene98447:intron | 30.0% | |
| ATGTTATCACCAGAAGAATT+AGG | + | chr5.4:18694687-18694706 | MS.gene98447:intron | 30.0% | |
| ATTGGAATTGTGGTAAAGAT+GGG | + | chr5.4:18691219-18691238 | MS.gene98447:intron | 30.0% | |
| ATTGTCGAAATCATCACATT+CGG | + | chr5.4:18694283-18694302 | MS.gene98447:intron | 30.0% | |
| CATGCTCTTATGTTAATGTA+AGG | - | chr5.4:18693041-18693060 | None:intergenic | 30.0% | |
| CCATAAAATCCAGATTGATA+AGG | - | chr5.4:18693107-18693126 | None:intergenic | 30.0% | |
| CTTTAGTAGATTATGCAGTA+AGG | + | chr5.4:18691842-18691861 | MS.gene98447:intron | 30.0% | |
| GTAAATACTCACAATAGGAT+GGG | - | chr5.4:18693967-18693986 | None:intergenic | 30.0% | |
| GTCTGATGGAAATTATATTC+AGG | + | chr5.4:18694242-18694261 | MS.gene98447:CDS | 30.0% | |
| TCGATATCAAGAATTATGTC+AGG | + | chr5.4:18694141-18694160 | MS.gene98447:CDS | 30.0% | |
| TCTTTACATCATAGAAACGT+AGG | + | chr5.4:18693133-18693152 | MS.gene98447:intron | 30.0% | |
| TGAAAGCTTACTACTTTGTA+TGG | - | chr5.4:18694510-18694529 | None:intergenic | 30.0% | |
| TGCATCTTAATGTATAGGAT+AGG | - | chr5.4:18692700-18692719 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACATTC+TGG | + | chr5.4:18691977-18691996 | MS.gene98447:intron | 30.0% | |
| TGTAAATACTCACAATAGGA+TGG | - | chr5.4:18693968-18693987 | None:intergenic | 30.0% | |
| TGTTTCTTAGTATTGTGTTG+TGG | + | chr5.4:18693412-18693431 | MS.gene98447:intron | 30.0% | |
| TTAGGATTTGATTGGAATTG+TGG | + | chr5.4:18691209-18691228 | MS.gene98447:intron | 30.0% | |
| TTATATATCGGCATACAGAT+AGG | - | chr5.4:18693442-18693461 | None:intergenic | 30.0% | |
| TTGTCTTTCGATTCCTATTT+CGG | + | chr5.4:18694940-18694959 | MS.gene98447:intron | 30.0% | |
| ! | ATAATTTGAGACAGCACAAA+AGG | - | chr5.4:18693003-18693022 | None:intergenic | 30.0% |
| ! | ATCAATCTGGATTTTATGGT+TGG | + | chr5.4:18693108-18693127 | MS.gene98447:intron | 30.0% |
| ! | CCTTATCAATCTGGATTTTA+TGG | + | chr5.4:18693104-18693123 | MS.gene98447:intron | 30.0% |
| ! | GACCAAAGATGTAGATATTT+TGG | + | chr5.4:18691631-18691650 | MS.gene98447:intron | 30.0% |
| ! | TCAATCTGGATTTTATGGTT+GGG | + | chr5.4:18693109-18693128 | MS.gene98447:intron | 30.0% |
| ! | TGACGATTTTGTTGATGTTA+GGG | + | chr5.4:18691165-18691184 | MS.gene98447:intron | 30.0% |
| ! | TGTTGGGGTATTTAGAATTA+GGG | + | chr5.4:18691348-18691367 | MS.gene98447:intron | 30.0% |
| ! | TGTTTAGCTTCATTCTTCAA+TGG | + | chr5.4:18692299-18692318 | MS.gene98447:intron | 30.0% |
| !! | TAGAAAGTACCTTAAAGTTC+AGG | + | chr5.4:18693490-18693509 | MS.gene98447:intron | 30.0% |
| !! | TATCAATCACGTTTTCAAGA+AGG | - | chr5.4:18691595-18691614 | None:intergenic | 30.0% |
| !!! | ATTTGTTTTTTTGTTTGGGG+AGG | + | chr5.4:18691411-18691430 | MS.gene98447:intron | 30.0% |
| !!! | TTTGTTTTTTTGTTTGGGGA+GGG | + | chr5.4:18691412-18691431 | MS.gene98447:intron | 30.0% |
| AAAACTCAGCAAATTCCTGA+CGG | - | chr5.4:18692870-18692889 | None:intergenic | 35.0% | |
| AAAATCATTACGGGATCGAT+TGG | + | chr5.4:18695265-18695284 | MS.gene98447:CDS | 35.0% | |
| AAAGGAATGCAAGAATCTTC+TGG | + | chr5.4:18692753-18692772 | MS.gene98447:CDS | 35.0% | |
| AATTTCTTCACTCTGCTTGT+TGG | + | chr5.4:18694017-18694036 | MS.gene98447:intron | 35.0% | |
| AGAAAACAGCCTAATTCTTC+TGG | - | chr5.4:18694699-18694718 | None:intergenic | 35.0% | |
| AGTAAGGAAAGTAGATCAGA+TGG | + | chr5.4:18691797-18691816 | MS.gene98447:intron | 35.0% | |
| ATATCAATGGCAAACACAGA+AGG | - | chr5.4:18692362-18692381 | None:intergenic | 35.0% | |
| ATCACATTCTTTGCTTCTGA+TGG | + | chr5.4:18692117-18692136 | MS.gene98447:intron | 35.0% | |
| ATCTGTACCAGAAGAAGTTA+TGG | + | chr5.4:18690969-18690988 | MS.gene98447:CDS | 35.0% | |
| ATTCTGCAGGCATTTAATTC+TGG | + | chr5.4:18694109-18694128 | MS.gene98447:CDS | 35.0% | |
| ATTTCCAACTCAATTGATGG+TGG | + | chr5.4:18694331-18694350 | MS.gene98447:intron | 35.0% | |
| ATTTGGGAGTTTAGTTGAGA+CGG | + | chr5.4:18691142-18691161 | MS.gene98447:intron | 35.0% | |
| CAAAATCAACCTTCTCAAGT+TGG | + | chr5.4:18692561-18692580 | MS.gene98447:CDS | 35.0% | |
| CAAACCAGAGCAATTTCTAA+CGG | - | chr5.4:18694971-18694990 | None:intergenic | 35.0% | |
| CAACTATCATCAGAGACAAA+GGG | + | chr5.4:18693635-18693654 | MS.gene98447:intron | 35.0% | |
| CTGATCTACTTTCCTTACTA+CGG | - | chr5.4:18691796-18691815 | None:intergenic | 35.0% | |
| CTTAACTACCATTAAGACCT+AGG | - | chr5.4:18693587-18693606 | None:intergenic | 35.0% | |
| GAGTATTCTTACTTAGGATC+AGG | + | chr5.4:18692486-18692505 | MS.gene98447:intron | 35.0% | |
| GATTGGAATTGTGGTAAAGA+TGG | + | chr5.4:18691218-18691237 | MS.gene98447:intron | 35.0% | |
| GCAGAAACACCTGATTTAAT+TGG | + | chr5.4:18695332-18695351 | MS.gene98447:CDS | 35.0% | |
| GGCATTTAATTCTGGTGATT+TGG | + | chr5.4:18694117-18694136 | MS.gene98447:CDS | 35.0% | |
| GGTATAATTGATCAAGTGGA+GGG | + | chr5.4:18695191-18695210 | MS.gene98447:CDS | 35.0% | |
| GTGTATTTGGACCTGAAAAA+CGG | - | chr5.4:18691035-18691054 | None:intergenic | 35.0% | |
| GTTGGACACAGATTAATGTT+GGG | - | chr5.4:18693520-18693539 | None:intergenic | 35.0% | |
| TAGCAAATCTTCTCCATCAT+TGG | + | chr5.4:18692158-18692177 | MS.gene98447:intron | 35.0% | |
| TCAAAATGAACAGAAGCTGT+TGG | + | chr5.4:18694201-18694220 | MS.gene98447:CDS | 35.0% | |
| TCAACTATCATCAGAGACAA+AGG | + | chr5.4:18693634-18693653 | MS.gene98447:intron | 35.0% | |
| TCACATTCTTTGCTTCTGAT+GGG | + | chr5.4:18692118-18692137 | MS.gene98447:intron | 35.0% | |
| TGAACAATGGTTTCCAATGA+TGG | - | chr5.4:18692174-18692193 | None:intergenic | 35.0% | |
| TGAATGGTACAATTCTCTTG+CGG | + | chr5.4:18690946-18690965 | MS.gene98447:CDS | 35.0% | |
| TGTCTTTCGATTCCTATTTC+GGG | + | chr5.4:18694941-18694960 | MS.gene98447:intron | 35.0% | |
| TGTTGGACACAGATTAATGT+TGG | - | chr5.4:18693521-18693540 | None:intergenic | 35.0% | |
| ! | AGCCAAACATCCATTTTCTA+GGG | + | chr5.4:18693072-18693091 | MS.gene98447:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.4:18691957-18691976 | MS.gene98447:intron | 35.0% |
| ! | GAAGATTCTTGCATTCCTTT+TGG | - | chr5.4:18692753-18692772 | None:intergenic | 35.0% |
| ! | GAGTGAAAAGAGAGTGTATT+TGG | - | chr5.4:18691048-18691067 | None:intergenic | 35.0% |
| ! | GATGTTTCTGCTTTAAGTAG+TGG | + | chr5.4:18693792-18693811 | MS.gene98447:intron | 35.0% |
| ! | GCAAGAATCTTCTGGAAAAT+GGG | + | chr5.4:18692761-18692780 | MS.gene98447:CDS | 35.0% |
| ! | GTGACGATTTTGTTGATGTT+AGG | + | chr5.4:18691164-18691183 | MS.gene98447:intron | 35.0% |
| ! | GTGTTGGGGTATTTAGAATT+AGG | + | chr5.4:18691347-18691366 | MS.gene98447:intron | 35.0% |
| ! | TAGCCAAACATCCATTTTCT+AGG | + | chr5.4:18693071-18693090 | MS.gene98447:intron | 35.0% |
| ! | TGAGGGTATAATTGATCAAG+TGG | + | chr5.4:18695187-18695206 | MS.gene98447:CDS | 35.0% |
| ! | TGCAAGAATCTTCTGGAAAA+TGG | + | chr5.4:18692760-18692779 | MS.gene98447:CDS | 35.0% |
| ! | TGTTCATTTTGAACTAGTGC+TGG | - | chr5.4:18694193-18694212 | None:intergenic | 35.0% |
| ! | TTGACGGAGTATTCTTACTT+AGG | + | chr5.4:18692480-18692499 | MS.gene98447:intron | 35.0% |
| !! | ACTTTTGAGTGAATGGGTTT+AGG | + | chr5.4:18691243-18691262 | MS.gene98447:intron | 35.0% |
| !! | AGAAGAATTAGGCTGTTTTC+TGG | + | chr5.4:18694698-18694717 | MS.gene98447:intron | 35.0% |
| !! | ATGGGAACTTTTGAGTGAAT+GGG | + | chr5.4:18691237-18691256 | MS.gene98447:intron | 35.0% |
| !! | ATTCAGTAGCGTTGATCTTT+AGG | + | chr5.4:18694653-18694672 | MS.gene98447:intron | 35.0% |
| !! | CAAAAGTGCTCTTCTCTATT+TGG | + | chr5.4:18692891-18692910 | MS.gene98447:CDS | 35.0% |
| !! | CAACTTGAGAAGGTTGATTT+TGG | - | chr5.4:18692563-18692582 | None:intergenic | 35.0% |
| !! | CTTTTGAGTGAATGGGTTTA+GGG | + | chr5.4:18691244-18691263 | MS.gene98447:intron | 35.0% |
| !!! | ATGGTGGGTTAAGATTTTAG+CGG | + | chr5.4:18691441-18691460 | MS.gene98447:intron | 35.0% |
| !!! | GAGTGTCTTTATTTTCAACG+AGG | + | chr5.4:18692059-18692078 | MS.gene98447:intron | 35.0% |
| !!! | GGGTTTAGGGTTATTTCTTT+TGG | + | chr5.4:18691257-18691276 | MS.gene98447:intron | 35.0% |
| AAACTCAGCAAATTCCTGAC+GGG | - | chr5.4:18692869-18692888 | None:intergenic | 40.0% | |
| AAGGAAAGTAGATCAGATGG+AGG | + | chr5.4:18691800-18691819 | MS.gene98447:intron | 40.0% | |
| AAGTAGATCAGATGGAGGAT+AGG | + | chr5.4:18691805-18691824 | MS.gene98447:intron | 40.0% | |
| ACCCTGCTTCATTTGTCAAT+CGG | + | chr5.4:18694588-18694607 | MS.gene98447:intron | 40.0% | |
| ACCTAAGCCATTCGACAAAT+GGG | - | chr5.4:18691740-18691759 | None:intergenic | 40.0% | |
| ACCTTGCTCAAGCTTGAATA+AGG | - | chr5.4:18692728-18692747 | None:intergenic | 40.0% | |
| AGACAAGCGAAACAGTATGT+TGG | - | chr5.4:18694926-18694945 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr5.4:18691858-18691877 | MS.gene98447:intron | 40.0% | |
| AGTAGTAAGCTTTCAACTCG+TGG | + | chr5.4:18694515-18694534 | MS.gene98447:intron | 40.0% | |
| AGTCAGATCAAAAGAGGTAG+AGG | + | chr5.4:18691886-18691905 | MS.gene98447:intron | 40.0% | |
| AGTTTCTCCCCTTATCAATC+TGG | + | chr5.4:18693095-18693114 | MS.gene98447:intron | 40.0% | |
| ATAGCCACCATCAATTGAGT+TGG | - | chr5.4:18694338-18694357 | None:intergenic | 40.0% | |
| ATTCCAGGTTCATCTGATTG+AGG | + | chr5.4:18695169-18695188 | MS.gene98447:intron | 40.0% | |
| ATTCTTACTTAGGATCAGGC+TGG | + | chr5.4:18692490-18692509 | MS.gene98447:intron | 40.0% | |
| CACAGAAGGTAATAGATGAG+TGG | - | chr5.4:18692348-18692367 | None:intergenic | 40.0% | |
| CAGGACAGAGATATGATATG+TGG | + | chr5.4:18693226-18693245 | MS.gene98447:intron | 40.0% | |
| CGTTAGAAATTGCTCTGGTT+TGG | + | chr5.4:18694969-18694988 | MS.gene98447:intron | 40.0% | |
| CTATTTGGCATACACATCAG+TGG | + | chr5.4:18692906-18692925 | MS.gene98447:CDS | 40.0% | |
| CTCCCTAGAAAATGGATGTT+TGG | - | chr5.4:18693077-18693096 | None:intergenic | 40.0% | |
| GACAGATTAAGAGCCTTCTA+GGG | + | chr5.4:18694062-18694081 | MS.gene98447:intron | 40.0% | |
| GAGACAAAGGGTAACCTAAT+TGG | + | chr5.4:18693647-18693666 | MS.gene98447:intron | 40.0% | |
| GAGGATAGTCAGATCAAAAG+AGG | + | chr5.4:18691880-18691899 | MS.gene98447:intron | 40.0% | |
| GATCAACATTCTGTGTCTGA+TGG | + | chr5.4:18694228-18694247 | MS.gene98447:CDS | 40.0% | |
| GGACAGCATAGAAATCTTTG+TGG | - | chr5.4:18693706-18693725 | None:intergenic | 40.0% | |
| GGGGATAACATCTACAACTT+TGG | + | chr5.4:18693930-18693949 | MS.gene98447:CDS | 40.0% | |
| GGGTATAATTGATCAAGTGG+AGG | + | chr5.4:18695190-18695209 | MS.gene98447:CDS | 40.0% | |
| GTAGTAAGCTTTCAACTCGT+GGG | + | chr5.4:18694516-18694535 | MS.gene98447:intron | 40.0% | |
| GTCTTTCGATTCCTATTTCG+GGG | + | chr5.4:18694942-18694961 | MS.gene98447:intron | 40.0% | |
| GTTTCCGTTAGAAATTGCTC+TGG | + | chr5.4:18694964-18694983 | MS.gene98447:intron | 40.0% | |
| TAATAGCTCGCATACACAGT+TGG | - | chr5.4:18692820-18692839 | None:intergenic | 40.0% | |
| TACCTAAGCCATTCGACAAA+TGG | - | chr5.4:18691741-18691760 | None:intergenic | 40.0% | |
| TCAATATCACAAATCCCGTC+AGG | + | chr5.4:18692852-18692871 | MS.gene98447:CDS | 40.0% | |
| TCGAATGGCTTAGGTAGTTT+GGG | + | chr5.4:18691745-18691764 | MS.gene98447:intron | 40.0% | |
| TGTGTATGCGAGCTATTACT+GGG | + | chr5.4:18692822-18692841 | MS.gene98447:CDS | 40.0% | |
| TGTTCAATACCCAGAACTCT+TGG | - | chr5.4:18695242-18695261 | None:intergenic | 40.0% | |
| TTACAGACAGGCTCTTCATA+AGG | - | chr5.4:18694448-18694467 | None:intergenic | 40.0% | |
| TTCAAGTCGAACTTACAGAC+AGG | - | chr5.4:18694460-18694479 | None:intergenic | 40.0% | |
| TTCCAGGTTCATCTGATTGA+GGG | + | chr5.4:18695170-18695189 | MS.gene98447:intron | 40.0% | |
| TTCCTTACTACGGAATCTAC+AGG | - | chr5.4:18691786-18691805 | None:intergenic | 40.0% | |
| TTGGGCATTCCTGAACTTTA+AGG | - | chr5.4:18693502-18693521 | None:intergenic | 40.0% | |
| ! | ATGGCTCTACTATATTCTGC+AGG | + | chr5.4:18694096-18694115 | MS.gene98447:CDS | 40.0% |
| ! | CTGCCATTGGTTATCTTGAA+GGG | + | chr5.4:18692629-18692648 | MS.gene98447:CDS | 40.0% |
| ! | TGCCATTGGTTATCTTGAAG+GGG | + | chr5.4:18692630-18692649 | MS.gene98447:CDS | 40.0% |
| ! | TTTTTCCCCCATTTGTCGAA+TGG | + | chr5.4:18691730-18691749 | MS.gene98447:intron | 40.0% |
| !! | GATGGGAACTTTTGAGTGAA+TGG | + | chr5.4:18691236-18691255 | MS.gene98447:intron | 40.0% |
| !! | GTTGATTTTGGTCTCGAAGT+CGG | - | chr5.4:18692551-18692570 | None:intergenic | 40.0% |
| !!! | GGTTATTTCTTTTGGATCCG+AGG | + | chr5.4:18691265-18691284 | MS.gene98447:intron | 40.0% |
| AAGCTTTCAACTCGTGGGTT+GGG | + | chr5.4:18694521-18694540 | MS.gene98447:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.4:18691861-18691880 | MS.gene98447:intron | 45.0% | |
| AGCCGATTGACAAATGAAGC+AGG | - | chr5.4:18694593-18694612 | None:intergenic | 45.0% | |
| AGGAAGTTGGGTAGGGTTTA+GGG | + | chr5.4:18691285-18691304 | MS.gene98447:intron | 45.0% | |
| ATTCCACCTTTGACCCTAGA+AGG | - | chr5.4:18694078-18694097 | None:intergenic | 45.0% | |
| CAAAATGCGCCAACTTGAGA+AGG | - | chr5.4:18692573-18692592 | None:intergenic | 45.0% | |
| CCTAAGCCATTCGACAAATG+GGG | - | chr5.4:18691739-18691758 | None:intergenic | 45.0% | |
| CGACAGATTAAGAGCCTTCT+AGG | + | chr5.4:18694061-18694080 | MS.gene98447:intron | 45.0% | |
| CGCTCTGCAATAACACTCAA+GGG | - | chr5.4:18694392-18694411 | None:intergenic | 45.0% | |
| CTAAGCCATTCGACAAATGG+GGG | - | chr5.4:18691738-18691757 | None:intergenic | 45.0% | |
| CTGTGTATGCGAGCTATTAC+TGG | + | chr5.4:18692821-18692840 | MS.gene98447:CDS | 45.0% | |
| CTTATCCAACTAAGCGAGGT+CGG | - | chr5.4:18692022-18692041 | None:intergenic | 45.0% | |
| GACCCCTTCAAGATAACCAA+TGG | - | chr5.4:18692635-18692654 | None:intergenic | 45.0% | |
| GACCTGTAGATTCCGTAGTA+AGG | + | chr5.4:18691781-18691800 | MS.gene98447:intron | 45.0% | |
| GAGAACTTCGAAGCGATTCA+AGG | - | chr5.4:18690913-18690932 | None:intergenic | 45.0% | |
| GCAACTAGCAAGCATTAGCA+TGG | - | chr5.4:18694761-18694780 | None:intergenic | 45.0% | |
| GCCGATTGACAAATGAAGCA+GGG | - | chr5.4:18694592-18694611 | None:intergenic | 45.0% | |
| GCTGATGCCATAACTTCTTC+TGG | - | chr5.4:18690979-18690998 | None:intergenic | 45.0% | |
| GGAATAGTTCGATCTTCCGA+AGG | - | chr5.4:18694371-18694390 | None:intergenic | 45.0% | |
| GGGAGAAACTCCCTAGAAAA+TGG | - | chr5.4:18693085-18693104 | None:intergenic | 45.0% | |
| GTCGAATGGCTTAGGTAGTT+TGG | + | chr5.4:18691744-18691763 | MS.gene98447:intron | 45.0% | |
| GTGTTGCATTGCATTCGTGT+TGG | - | chr5.4:18693538-18693557 | None:intergenic | 45.0% | |
| TAAACCCTACCCAACTTCCT+CGG | - | chr5.4:18691285-18691304 | None:intergenic | 45.0% | |
| TAAGCTTTCAACTCGTGGGT+TGG | + | chr5.4:18694520-18694539 | MS.gene98447:intron | 45.0% | |
| TACCCTCAATCAGATGAACC+TGG | - | chr5.4:18695175-18695194 | None:intergenic | 45.0% | |
| TCATTACGGGATCGATTGGA+CGG | + | chr5.4:18695269-18695288 | MS.gene98447:CDS | 45.0% | |
| TCGCTCTGCAATAACACTCA+AGG | - | chr5.4:18694393-18694412 | None:intergenic | 45.0% | |
| TCGCTTAGTTGGATAAGGCT+TGG | + | chr5.4:18692025-18692044 | MS.gene98447:intron | 45.0% | |
| TCTAACGGAAACCCCGAAAT+AGG | - | chr5.4:18694956-18694975 | None:intergenic | 45.0% | |
| TCTCTCTGACTCATTCAAGC+TGG | + | chr5.4:18692933-18692952 | MS.gene98447:CDS | 45.0% | |
| TCTGAGAAAGAAGCTGCCAT+TGG | + | chr5.4:18692616-18692635 | MS.gene98447:CDS | 45.0% | |
| TGTACCATTCACCGAGTTCA+GGG | - | chr5.4:18690937-18690956 | None:intergenic | 45.0% | |
| TTGCTGTGATGGTTTCTCGA+CGG | + | chr5.4:18692590-18692609 | MS.gene98447:CDS | 45.0% | |
| TTGTACCATTCACCGAGTTC+AGG | - | chr5.4:18690938-18690957 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCAACTAAGCG+AGG | - | chr5.4:18692026-18692045 | None:intergenic | 45.0% |
| ! | CTGCTTTAAGTAGTGGTCAG+AGG | + | chr5.4:18693799-18693818 | MS.gene98447:intron | 45.0% |
| ! | CTTTTGGATCCGAGGAAGTT+GGG | + | chr5.4:18691273-18691292 | MS.gene98447:intron | 45.0% |
| ! | GCCTTATTCAAGCTTGAGCA+AGG | + | chr5.4:18692724-18692743 | MS.gene98447:CDS | 45.0% |
| ! | GCTGCCATTGGTTATCTTGA+AGG | + | chr5.4:18692628-18692647 | MS.gene98447:CDS | 45.0% |
| ! | TCTTTTGGATCCGAGGAAGT+TGG | + | chr5.4:18691272-18691291 | MS.gene98447:intron | 45.0% |
| !! | TAAGAGCCTTCTAGGGTCAA+AGG | + | chr5.4:18694069-18694088 | MS.gene98447:CDS | 45.0% |
| !! | TTCTAGGGTCAAAGGTGGAA+TGG | + | chr5.4:18694077-18694096 | MS.gene98447:CDS | 45.0% |
| !!! | TCTTGCTCTTGCCGTTTTTC+AGG | + | chr5.4:18691021-18691040 | MS.gene98447:CDS | 45.0% |
| AGGGCACAGTACATGTTTCC+TGG | + | chr5.4:18695210-18695229 | MS.gene98447:CDS | 50.0% | |
| CCCCATTTGTCGAATGGCTT+AGG | + | chr5.4:18691736-18691755 | MS.gene98447:intron | 50.0% | |
| CGAAGTTCTCACCCTGAACT+CGG | + | chr5.4:18690923-18690942 | MS.gene98447:CDS | 50.0% | |
| CGACCTCGCTTAGTTGGATA+AGG | + | chr5.4:18692020-18692039 | MS.gene98447:intron | 50.0% | |
| GAGGAAGTTGGGTAGGGTTT+AGG | + | chr5.4:18691284-18691303 | MS.gene98447:intron | 50.0% | |
| GCTTGAGCAAGGTGACCAAA+AGG | + | chr5.4:18692735-18692754 | MS.gene98447:CDS | 50.0% | |
| GGGCACAGTACATGTTTCCT+GGG | + | chr5.4:18695211-18695230 | MS.gene98447:CDS | 50.0% | |
| TAGTTCGATCTTCCGAAGGC+CGG | - | chr5.4:18694367-18694386 | None:intergenic | 50.0% | |
| TCGTGCGTCCTAGGTCTTAA+TGG | + | chr5.4:18693576-18693595 | MS.gene98447:intron | 50.0% | |
| TGGGTGCAACCAAGAGTTCT+GGG | + | chr5.4:18695230-18695249 | MS.gene98447:CDS | 50.0% | |
| TGTTTGGGGAGGGATGTGAA+TGG | + | chr5.4:18691422-18691441 | MS.gene98447:intron | 50.0% | |
| TTCTATGCGCTGCTCTCTAG+TGG | - | chr5.4:18692674-18692693 | None:intergenic | 50.0% | |
| TTGTCCCTTTCTGCTCTGCT+GGG | + | chr5.4:18693909-18693928 | MS.gene98447:CDS | 50.0% | |
| ! | ATCAGGTGTTTCTGCCTCGA+TGG | - | chr5.4:18695327-18695346 | None:intergenic | 50.0% |
| ! | TTGGACCGGAAAAGTACACG+CGG | + | chr5.4:18695292-18695311 | MS.gene98447:CDS | 50.0% |
| !! | GTTGGCGCATTTTGCTGTGA+TGG | + | chr5.4:18692579-18692598 | MS.gene98447:CDS | 50.0% |
| !! | TGATGGTGGCTATTTGCAGC+CGG | + | chr5.4:18694345-18694364 | MS.gene98447:intron | 50.0% |
| ACTAAGCGAGGTCGGCTACA+TGG | - | chr5.4:18692014-18692033 | None:intergenic | 55.0% | |
| ATCCCCCAGCAGAGCAGAAA+GGG | - | chr5.4:18693916-18693935 | None:intergenic | 55.0% | |
| CAGAACTCTTGGTTGCACCC+AGG | - | chr5.4:18695231-18695250 | None:intergenic | 55.0% | |
| CTGGGTGCAACCAAGAGTTC+TGG | + | chr5.4:18695229-18695248 | MS.gene98447:CDS | 55.0% | |
| CTTGTCCCTTTCTGCTCTGC+TGG | + | chr5.4:18693908-18693927 | MS.gene98447:CDS | 55.0% | |
| GATCGATTGGACGGTTGGAC+CGG | + | chr5.4:18695278-18695297 | MS.gene98447:CDS | 55.0% | |
| GGATCCGAGGAAGTTGGGTA+GGG | + | chr5.4:18691278-18691297 | MS.gene98447:intron | 55.0% | |
| TACGGGATCGATTGGACGGT+TGG | + | chr5.4:18695273-18695292 | MS.gene98447:CDS | 55.0% | |
| TATCCCCCAGCAGAGCAGAA+AGG | - | chr5.4:18693917-18693936 | None:intergenic | 55.0% | |
| TGGATCCGAGGAAGTTGGGT+AGG | + | chr5.4:18691277-18691296 | MS.gene98447:intron | 55.0% | |
| TGGGGAGGGATGTGAATGGT+GGG | + | chr5.4:18691426-18691445 | MS.gene98447:intron | 55.0% | |
| TGTAGCCGACCTCGCTTAGT+TGG | + | chr5.4:18692014-18692033 | MS.gene98447:intron | 55.0% | |
| TGTCCCTTTCTGCTCTGCTG+GGG | + | chr5.4:18693910-18693929 | MS.gene98447:CDS | 55.0% | |
| TTGAGCTGTTCGTGCGTCCT+AGG | + | chr5.4:18693567-18693586 | MS.gene98447:intron | 55.0% | |
| TTGGGGAGGGATGTGAATGG+TGG | + | chr5.4:18691425-18691444 | MS.gene98447:intron | 55.0% | |
| ! | CAACGCCGCGTGTACTTTTC+CGG | - | chr5.4:18695300-18695319 | None:intergenic | 55.0% |
| ! | CTCACCCTGAACTCGGTGAA+TGG | + | chr5.4:18690930-18690949 | MS.gene98447:CDS | 55.0% |
| !! | GAGCCTTCTAGGGTCAAAGG+TGG | + | chr5.4:18694072-18694091 | MS.gene98447:CDS | 55.0% |
| GGCTATTTGCAGCCGGCCTT+CGG | + | chr5.4:18694352-18694371 | MS.gene98447:intron | 60.0% | |
| GTCCCTTTCTGCTCTGCTGG+GGG | + | chr5.4:18693911-18693930 | MS.gene98447:CDS | 60.0% | |
| CGCGGCGTTGTTGTCCATCG+AGG | + | chr5.4:18695310-18695329 | MS.gene98447:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18690893 | 18695361 | 18690893 | ID=MS.gene98447 |
| chr5.4 | mRNA | 18690893 | 18695361 | 18690893 | ID=MS.gene98447.t1;Parent=MS.gene98447 |
| chr5.4 | exon | 18690893 | 18691042 | 18690893 | ID=MS.gene98447.t1.exon1;Parent=MS.gene98447.t1 |
| chr5.4 | CDS | 18690893 | 18691042 | 18690893 | ID=cds.MS.gene98447.t1;Parent=MS.gene98447.t1 |
| chr5.4 | exon | 18692508 | 18692954 | 18692508 | ID=MS.gene98447.t1.exon2;Parent=MS.gene98447.t1 |
| chr5.4 | CDS | 18692508 | 18692954 | 18692508 | ID=cds.MS.gene98447.t1;Parent=MS.gene98447.t1 |
| chr5.4 | exon | 18693894 | 18693974 | 18693894 | ID=MS.gene98447.t1.exon3;Parent=MS.gene98447.t1 |
| chr5.4 | CDS | 18693894 | 18693974 | 18693894 | ID=cds.MS.gene98447.t1;Parent=MS.gene98447.t1 |
| chr5.4 | exon | 18694067 | 18694263 | 18694067 | ID=MS.gene98447.t1.exon4;Parent=MS.gene98447.t1 |
| chr5.4 | CDS | 18694067 | 18694263 | 18694067 | ID=cds.MS.gene98447.t1;Parent=MS.gene98447.t1 |
| chr5.4 | exon | 18694364 | 18694463 | 18694364 | ID=MS.gene98447.t1.exon5;Parent=MS.gene98447.t1 |
| chr5.4 | CDS | 18694364 | 18694463 | 18694364 | ID=cds.MS.gene98447.t1;Parent=MS.gene98447.t1 |
| chr5.4 | exon | 18695176 | 18695361 | 18695176 | ID=MS.gene98447.t1.exon6;Parent=MS.gene98447.t1 |
| chr5.4 | CDS | 18695176 | 18695361 | 18695176 | ID=cds.MS.gene98447.t1;Parent=MS.gene98447.t1 |
| Gene Sequence |
| Protein sequence |
