Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72901.t1 | XP_003612702.1 | 98.2 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 2.90E-209 | 737.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72901.t1 | Q8GYA6 | 83.2 | 388 | 63 | 1 | 1 | 388 | 1 | 386 | 2.1e-184 | 646.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72901.t1 | G7K9K1 | 98.2 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 2.1e-209 | 737.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051642 | MS.gene72901 | 0.808796 | 2.60E-50 | -1.69E-46 |
| MS.gene056632 | MS.gene72901 | 0.807225 | 5.61E-50 | -1.69E-46 |
| MS.gene057144 | MS.gene72901 | 0.806477 | 8.07E-50 | -1.69E-46 |
| MS.gene057145 | MS.gene72901 | 0.809515 | 1.82E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72901 | MS.gene70283 | PPI |
| MS.gene72901 | MS.gene70282 | PPI |
| MS.gene72901 | MS.gene004328 | PPI |
| MS.gene58134 | MS.gene72901 | PPI |
| MS.gene69716 | MS.gene72901 | PPI |
| MS.gene28183 | MS.gene72901 | PPI |
| MS.gene72901 | MS.gene56675 | PPI |
| MS.gene72901 | MS.gene69716 | PPI |
| MS.gene72901 | MS.gene80790 | PPI |
| MS.gene72901 | MS.gene028013 | PPI |
| MS.gene72901 | MS.gene030685 | PPI |
| MS.gene044013 | MS.gene72901 | PPI |
| MS.gene062770 | MS.gene72901 | PPI |
| MS.gene72901 | MS.gene29607 | PPI |
| MS.gene72901 | MS.gene24375 | PPI |
| MS.gene008081 | MS.gene72901 | PPI |
| MS.gene057320 | MS.gene72901 | PPI |
| MS.gene28454 | MS.gene72901 | PPI |
| MS.gene72901 | MS.gene58136 | PPI |
| MS.gene72901 | MS.gene98447 | PPI |
| MS.gene72901 | MS.gene030686 | PPI |
| MS.gene72901 | MS.gene002648 | PPI |
| MS.gene031999 | MS.gene72901 | PPI |
| MS.gene69251 | MS.gene72901 | PPI |
| MS.gene67099 | MS.gene72901 | PPI |
| MS.gene72901 | MS.gene80661 | PPI |
| MS.gene72902 | MS.gene72901 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72901.t1 | MTR_5g027960 | 98.196 | 388 | 5 | 1 | 1 | 388 | 1 | 386 | 0.0 | 772 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72901.t1 | AT4G19006 | 83.247 | 388 | 63 | 1 | 1 | 388 | 1 | 386 | 0.0 | 673 |
| MS.gene72901.t1 | AT5G45620 | 82.732 | 388 | 65 | 1 | 1 | 388 | 1 | 386 | 0.0 | 671 |
| MS.gene72901.t1 | AT4G19006 | 73.243 | 441 | 63 | 2 | 1 | 388 | 1 | 439 | 0.0 | 649 |
| MS.gene72901.t1 | AT5G45620 | 84.259 | 324 | 49 | 1 | 1 | 324 | 1 | 322 | 0.0 | 567 |
Find 84 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGTGCTCTTCTCTATT+TGG | 0.148267 | 5.1:+18948335 | MS.gene72901:CDS |
| TGCAAGAATCTTCTGGAAAA+TGG | 0.170541 | 5.1:+18948204 | MS.gene72901:CDS |
| CGACAGATTAAGAGCCTTCT+AGG | 0.205081 | 5.1:+18949510 | MS.gene72901:intron |
| GCAGAAACACCTGATTTAAT+TGG | 0.231748 | 5.1:+18950787 | MS.gene72901:CDS |
| CTTGTCCCTTTCTGCTCTGC+TGG | 0.238406 | 5.1:+18949357 | MS.gene72901:CDS |
| GGCATTTAATTCTGGTGATT+TGG | 0.264559 | 5.1:+18949572 | MS.gene72901:CDS |
| CTGTGTATGCGAGCTATTAC+TGG | 0.301939 | 5.1:+18948265 | MS.gene72901:CDS |
| CTGGGTGCAACCAAGAGTTC+TGG | 0.325908 | 5.1:+18950684 | MS.gene72901:CDS |
| GAAGATTCTTGCATTCCTTT+TGG | 0.328435 | 5.1:-18948194 | None:intergenic |
| AGGGCACAGTACATGTTTCC+TGG | 0.330946 | 5.1:+18950665 | MS.gene72901:CDS |
| TTGTACCATTCACCGAGTTC+AGG | 0.331765 | 5.1:-18946368 | None:intergenic |
| ACCTTGCTCAAGCTTGAATA+AGG | 0.333906 | 5.1:-18948169 | None:intergenic |
| AAAGGAATGCAAGAATCTTC+TGG | 0.334571 | 5.1:+18948197 | MS.gene72901:CDS |
| CAATTTGCATCTTAATGTAT+AGG | 0.364510 | 5.1:-18948146 | None:intergenic |
| GCTGATGCCATAACTTCTTC+TGG | 0.398801 | 5.1:-18946409 | None:intergenic |
| TTGTCCCTTTCTGCTCTGCT+GGG | 0.405367 | 5.1:+18949358 | MS.gene72901:CDS |
| GCAAGAATCTTCTGGAAAAT+GGG | 0.416747 | 5.1:+18948205 | MS.gene72901:CDS |
| GATTATTTGCAGCCGGCCTT+CGG | 0.425648 | 5.1:+18949807 | MS.gene72901:intron |
| GGGGATAACATCTACAACTT+TGG | 0.433711 | 5.1:+18949379 | MS.gene72901:CDS |
| GTCTGATGGAAATTATATTC+AGG | 0.441429 | 5.1:+18949697 | MS.gene72901:CDS |
| TGAACAGATAAAATCCTTAC+GGG | 0.442242 | 5.1:+18950711 | MS.gene72901:CDS |
| ATTCACGATCCAATTAAATC+AGG | 0.446172 | 5.1:-18950796 | None:intergenic |
| TTCCAGGTTCATCTGATTGA+GGG | 0.450314 | 5.1:+18950625 | MS.gene72901:intron |
| TTGAACAGATAAAATCCTTA+CGG | 0.468324 | 5.1:+18950710 | MS.gene72901:CDS |
| TGTTCAATACCCAGAACTCT+TGG | 0.469920 | 5.1:-18950694 | None:intergenic |
| TGGGTGCAACCAAGAGTTCT+GGG | 0.471407 | 5.1:+18950685 | MS.gene72901:CDS |
| ATTCCAGGTTCATCTGATTG+AGG | 0.471689 | 5.1:+18950624 | MS.gene72901:intron |
| GCTGCCATTGGTTATCTTGA+AGG | 0.473495 | 5.1:+18948072 | MS.gene72901:CDS |
| AAAATCCTTACGGGATCGAT+TGG | 0.484091 | 5.1:+18950720 | MS.gene72901:CDS |
| ATTAAGAGCCTTCTAGGGCC+AGG | 0.485594 | 5.1:+18949516 | MS.gene72901:CDS |
| CTGCCATTGGTTATCTTGAA+GGG | 0.488971 | 5.1:+18948073 | MS.gene72901:CDS |
| TACGGGATCGATTGGACGGT+TGG | 0.490235 | 5.1:+18950728 | MS.gene72901:CDS |
| TGTACCATTCACCGAGTTCA+GGG | 0.493012 | 5.1:-18946367 | None:intergenic |
| ATCTGTACCAGAAGAAGTTA+TGG | 0.497476 | 5.1:+18946402 | MS.gene72901:CDS |
| CTCACCCTGAACTCGGTGAA+TGG | 0.501156 | 5.1:+18946363 | MS.gene72901:CDS |
| ATCAGGTGTTTCTGCCTCGA+TGG | 0.508687 | 5.1:-18950779 | None:intergenic |
| GATCAACATTCTGTGTCTGA+TGG | 0.511761 | 5.1:+18949683 | MS.gene72901:CDS |
| TCAATATCACAAATCCCGTC+AGG | 0.511791 | 5.1:+18948296 | MS.gene72901:CDS |
| TGTCCCTTTCTGCTCTGCTG+GGG | 0.512089 | 5.1:+18949359 | MS.gene72901:CDS |
| GCTTGAGCAAGGTGACCAAA+AGG | 0.513089 | 5.1:+18948179 | MS.gene72901:CDS |
| GATCGATTGGACGGTTGGAC+CGG | 0.514901 | 5.1:+18950733 | MS.gene72901:CDS |
| TGTAAATACTCACAATAGGA+TGG | 0.517964 | 5.1:-18949414 | None:intergenic |
| GTCCCTTTCTGCTCTGCTGG+GGG | 0.520589 | 5.1:+18949360 | MS.gene72901:CDS |
| TTACAGATAGGCTCTTCATA+AGG | 0.525497 | 5.1:-18949900 | None:intergenic |
| TAAAATCAACCTTCTCAAGT+TGG | 0.525894 | 5.1:+18948005 | MS.gene72901:CDS |
| GCCTTATTCAAGCTTGAGCA+AGG | 0.527580 | 5.1:+18948168 | MS.gene72901:CDS |
| GAGAACTTCGAAGCGATTCA+AGG | 0.528592 | 5.1:-18946343 | None:intergenic |
| TCAAAATGAACAGAAGCTGT+TGG | 0.529532 | 5.1:+18949656 | MS.gene72901:CDS |
| GGGCACAGTACATGTTTCCT+GGG | 0.529779 | 5.1:+18950666 | MS.gene72901:CDS |
| CGAAGTTCTCACCCTGAACT+CGG | 0.534607 | 5.1:+18946356 | MS.gene72901:CDS |
| TCGATATCAAGAATTATGTC+AGG | 0.541395 | 5.1:+18949596 | MS.gene72901:CDS |
| TAGTTCGATCTTCCGAAGGC+CGG | 0.546687 | 5.1:-18949819 | None:intergenic |
| CGCTCTGCAATAACACTCAA+GGG | 0.547253 | 5.1:-18949844 | None:intergenic |
| TTCTATGCGCTGCTCTCTAG+TGG | 0.551669 | 5.1:-18948115 | None:intergenic |
| TCTGAGAAAGAAGCTGCCAT+TGG | 0.552784 | 5.1:+18948060 | MS.gene72901:CDS |
| AAAACTTTCTATAGAGAATG+TGG | 0.554790 | 5.1:+18949870 | MS.gene72901:CDS |
| AAGGTATTGCAGTGCAGCCA+TGG | 0.555178 | 5.1:-18946324 | None:intergenic |
| TGAGGGTATAATTGATCAAG+TGG | 0.558787 | 5.1:+18950642 | MS.gene72901:CDS |
| CAAAATGTGCCAACTTGAGA+AGG | 0.559547 | 5.1:-18948014 | None:intergenic |
| GACAGATTAAGAGCCTTCTA+GGG | 0.563638 | 5.1:+18949511 | MS.gene72901:intron |
| TTAAGAGCCTTCTAGGGCCA+GGG | 0.569610 | 5.1:+18949517 | MS.gene72901:CDS |
| TCTAGGGCCAGGGTCAAAAG+TGG | 0.575982 | 5.1:+18949527 | MS.gene72901:CDS |
| ACCGTCCAATCGATCCCGTA+AGG | 0.577387 | 5.1:-18950725 | None:intergenic |
| GTAAATACTCACAATAGGAT+GGG | 0.577630 | 5.1:-18949413 | None:intergenic |
| TTGCTGTGATGGTTTCTCGA+CGG | 0.578421 | 5.1:+18948034 | MS.gene72901:CDS |
| TCGCTCTGCAATAACACTCA+AGG | 0.579629 | 5.1:-18949845 | None:intergenic |
| TGCATCTTAATGTATAGGAT+AGG | 0.580855 | 5.1:-18948141 | None:intergenic |
| TCTCTCTGACTCATTCAAGC+TGG | 0.583254 | 5.1:+18948377 | MS.gene72901:CDS |
| TCCTTACGGGATCGATTGGA+CGG | 0.584260 | 5.1:+18950724 | MS.gene72901:CDS |
| AAACTCAGCAAATTCCTGAC+GGG | 0.585720 | 5.1:-18948310 | None:intergenic |
| TGCCATTGGTTATCTTGAAG+GGG | 0.587336 | 5.1:+18948074 | MS.gene72901:CDS |
| TAATAGCTCGCATACACAGT+TGG | 0.595991 | 5.1:-18948261 | None:intergenic |
| CTATTTGGCATACACATCAG+TGG | 0.599964 | 5.1:+18948350 | MS.gene72901:CDS |
| GGCCAGGGTCAAAAGTGGAA+TGG | 0.600287 | 5.1:+18949532 | MS.gene72901:CDS |
| TGTGTATGCGAGCTATTACT+GGG | 0.603316 | 5.1:+18948266 | MS.gene72901:CDS |
| GACCCCTTCAAGATAACCAA+TGG | 0.621964 | 5.1:-18948076 | None:intergenic |
| AAAACTCAGCAAATTCCTGA+CGG | 0.624927 | 5.1:-18948311 | None:intergenic |
| GGTATAATTGATCAAGTGGA+GGG | 0.641521 | 5.1:+18950646 | MS.gene72901:CDS |
| GGAATAGTTCGATCTTCCGA+AGG | 0.642595 | 5.1:-18949823 | None:intergenic |
| GGGTATAATTGATCAAGTGG+AGG | 0.645121 | 5.1:+18950645 | MS.gene72901:CDS |
| CGCGGCGTTGTTGTCCATCG+AGG | 0.648030 | 5.1:+18950765 | MS.gene72901:CDS |
| TGAATGGTACAATTCTCTTG+CGG | 0.666797 | 5.1:+18946379 | MS.gene72901:CDS |
| CAGAACTCTTGGTTGCACCC+AGG | 0.676624 | 5.1:-18950683 | None:intergenic |
| TTGGACCGGAAAAGTACACG+CGG | 0.778962 | 5.1:+18950747 | MS.gene72901:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CACTTTTTATTATATTATTA+TGG | + | chr5.1:18946983-18947002 | MS.gene72901:intron | 10.0% |
| !! | ACTAAAATCAAATGAAAATT+TGG | - | chr5.1:18947705-18947724 | None:intergenic | 15.0% |
| !! | AGTAACAAAAATTAAACTAT+TGG | - | chr5.1:18946513-18946532 | None:intergenic | 15.0% |
| !! | ATAATTATGAAAAACCAATT+AGG | - | chr5.1:18949113-18949132 | None:intergenic | 15.0% |
| !! | CGATATATAAATTCAAAAAA+GGG | + | chr5.1:18948901-18948920 | MS.gene72901:intron | 15.0% |
| !! | GGAATAAATTTATTCATATA+AGG | - | chr5.1:18950609-18950628 | None:intergenic | 15.0% |
| !! | GTGTATTAATTTAATAAGTA+AGG | - | chr5.1:18949176-18949195 | None:intergenic | 15.0% |
| !! | GTTTATAATTATTTGTTTGA+CGG | + | chr5.1:18947908-18947927 | MS.gene72901:intron | 15.0% |
| !! | TACTTATTAAATTAATACAC+AGG | + | chr5.1:18949176-18949195 | MS.gene72901:intron | 15.0% |
| !! | TATATGAATAAATTTATTCC+AGG | + | chr5.1:18950609-18950628 | MS.gene72901:intron | 15.0% |
| !!! | ATTTTCATTTGATTTTAGTT+CGG | + | chr5.1:18947706-18947725 | MS.gene72901:intron | 15.0% |
| !!! | CCTTTTTTGAATTTATATAT+CGG | - | chr5.1:18948903-18948922 | None:intergenic | 15.0% |
| !!! | CTATTTTGTTTTGTTTTTTA+GGG | + | chr5.1:18946625-18946644 | MS.gene72901:intron | 15.0% |
| !!! | GTTATGTTTTTATTGAAAAT+TGG | + | chr5.1:18949212-18949231 | MS.gene72901:intron | 15.0% |
| !!! | TCTATTTTGTTTTGTTTTTT+AGG | + | chr5.1:18946624-18946643 | MS.gene72901:intron | 15.0% |
| !!! | TGCTTTTATTTTTTGTATTT+TGG | + | chr5.1:18950277-18950296 | MS.gene72901:intron | 15.0% |
| !!! | TTGTATATGAAATTGAATTT+TGG | + | chr5.1:18946757-18946776 | MS.gene72901:intron | 15.0% |
| !! | AATGTATAAGAGAAACTATT+AGG | + | chr5.1:18947354-18947373 | MS.gene72901:intron | 20.0% |
| !! | ATGTGATAAAAATATTAGAC+AGG | - | chr5.1:18947548-18947567 | None:intergenic | 20.0% |
| !! | ATTAGAAGAAATAAGAAACA+GGG | - | chr5.1:18947829-18947848 | None:intergenic | 20.0% |
| !! | CAAAATTTCAACATTAACAA+TGG | - | chr5.1:18950353-18950372 | None:intergenic | 20.0% |
| !! | CATTTATAAAAAGATTGCAA+GGG | - | chr5.1:18947109-18947128 | None:intergenic | 20.0% |
| !! | CCGATATATAAATTCAAAAA+AGG | + | chr5.1:18948900-18948919 | MS.gene72901:intron | 20.0% |
| !! | TAATCTACTAAAGAATCTAA+AGG | - | chr5.1:18947269-18947288 | None:intergenic | 20.0% |
| !! | TATTAGAAGAAATAAGAAAC+AGG | - | chr5.1:18947830-18947849 | None:intergenic | 20.0% |
| !! | TTTGCGGTTTATTAAAATTA+GGG | + | chr5.1:18946543-18946562 | MS.gene72901:intron | 20.0% |
| !!! | CAAATTTTGCTATTCAAATT+TGG | + | chr5.1:18950249-18950268 | MS.gene72901:intron | 20.0% |
| !!! | CATTGTTAATGTTGAAATTT+TGG | + | chr5.1:18950351-18950370 | MS.gene72901:intron | 20.0% |
| !!! | GCAAACTTCTTTTTTTAAAA+TGG | - | chr5.1:18950540-18950559 | None:intergenic | 20.0% |
| !!! | GTTACTTAGTTTTAATTTTG+CGG | + | chr5.1:18946527-18946546 | MS.gene72901:intron | 20.0% |
| !!! | GTTTCTCTTATACATTTTAT+AGG | - | chr5.1:18947350-18947369 | None:intergenic | 20.0% |
| !!! | TATTATTATGGTTTGAGATA+TGG | + | chr5.1:18946995-18947014 | MS.gene72901:intron | 20.0% |
| !!! | TTGGATTTGTATTTTTGTTT+GGG | + | chr5.1:18946841-18946860 | MS.gene72901:intron | 20.0% |
| !!! | TTTGGATTTGTATTTTTGTT+TGG | + | chr5.1:18946840-18946859 | MS.gene72901:intron | 20.0% |
| !!! | TTTTGCGGTTTATTAAAATT+AGG | + | chr5.1:18946542-18946561 | MS.gene72901:intron | 20.0% |
| !!! | TTTTGGGTTTTTTTTTGTTT+TGG | + | chr5.1:18946822-18946841 | MS.gene72901:intron | 20.0% |
| !!! | TTTTTTAAATGCTTCTTATC+TGG | + | chr5.1:18949443-18949462 | MS.gene72901:intron | 20.0% |
| ! | AAAACTTTCTATAGAGAATG+TGG | + | chr5.1:18949870-18949889 | MS.gene72901:CDS | 25.0% |
| ! | AACTAATTCAAAAGTAGTTC+TGG | - | chr5.1:18948758-18948777 | None:intergenic | 25.0% |
| ! | AATACACAGGACTTATAATA+AGG | + | chr5.1:18949189-18949208 | MS.gene72901:intron | 25.0% |
| ! | AATCAAATGAAAATTTGGAC+TGG | - | chr5.1:18947700-18947719 | None:intergenic | 25.0% |
| ! | AATTAGGGTTTCTGTTAATT+TGG | + | chr5.1:18946558-18946577 | MS.gene72901:intron | 25.0% |
| ! | AATTATCACACTAAAAGTCA+TGG | - | chr5.1:18947861-18947880 | None:intergenic | 25.0% |
| ! | ACTAATTCAAAAGTAGTTCT+GGG | - | chr5.1:18948757-18948776 | None:intergenic | 25.0% |
| ! | ACTTCACAAACAAAACAAAA+AGG | - | chr5.1:18950562-18950581 | None:intergenic | 25.0% |
| ! | ATAAAATCCAGATTGATAAG+GGG | - | chr5.1:18948549-18948568 | None:intergenic | 25.0% |
| ! | ATACACAGGACTTATAATAA+GGG | + | chr5.1:18949190-18949209 | MS.gene72901:intron | 25.0% |
| ! | ATATTAGTTAATGCAGGATT+TGG | + | chr5.1:18949327-18949346 | MS.gene72901:intron | 25.0% |
| ! | ATCCTTAATTATGAACATCT+AGG | - | chr5.1:18950471-18950490 | None:intergenic | 25.0% |
| ! | ATGATGTAAATACTCACAAT+AGG | - | chr5.1:18949421-18949440 | None:intergenic | 25.0% |
| ! | ATTAGGGTTTCTGTTAATTT+GGG | + | chr5.1:18946559-18946578 | MS.gene72901:intron | 25.0% |
| ! | ATTTCAACATTAACAATGGA+AGG | - | chr5.1:18950349-18950368 | None:intergenic | 25.0% |
| ! | CAATTTGCATCTTAATGTAT+AGG | - | chr5.1:18948149-18948168 | None:intergenic | 25.0% |
| ! | CATAAAATCCAGATTGATAA+GGG | - | chr5.1:18948550-18948569 | None:intergenic | 25.0% |
| ! | CCATTTATAAAAAGATTGCA+AGG | - | chr5.1:18947110-18947129 | None:intergenic | 25.0% |
| ! | GAAAAAAATCATAGACAAGT+TGG | - | chr5.1:18949289-18949308 | None:intergenic | 25.0% |
| ! | GATATGATATTAGTTAATGC+AGG | + | chr5.1:18949321-18949340 | MS.gene72901:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr5.1:18947407-18947426 | None:intergenic | 25.0% |
| ! | TAAAAATATTAGACAGGCTA+AGG | - | chr5.1:18947542-18947561 | None:intergenic | 25.0% |
| ! | TAACAATGGAAGGTAAAAAA+AGG | - | chr5.1:18950339-18950358 | None:intergenic | 25.0% |
| ! | TACCTAGATGTTCATAATTA+AGG | + | chr5.1:18950466-18950485 | MS.gene72901:intron | 25.0% |
| ! | TAGCAAAATTTGTCATTAGA+TGG | - | chr5.1:18950241-18950260 | None:intergenic | 25.0% |
| ! | TCATAAAATCCAGATTGATA+AGG | - | chr5.1:18948551-18948570 | None:intergenic | 25.0% |
| ! | TCTAAACATAGATTGAACAA+TGG | - | chr5.1:18947631-18947650 | None:intergenic | 25.0% |
| ! | TCTTTACATCATAGAAACTT+AGG | + | chr5.1:18948577-18948596 | MS.gene72901:intron | 25.0% |
| ! | TGATCAAGTGTATCATAAAT+TGG | + | chr5.1:18947136-18947155 | MS.gene72901:intron | 25.0% |
| ! | TTAACTAATATCATATCTGC+TGG | - | chr5.1:18949318-18949337 | None:intergenic | 25.0% |
| ! | TTGAACAGATAAAATCCTTA+CGG | + | chr5.1:18950710-18950729 | MS.gene72901:CDS | 25.0% |
| ! | TTTATTTCCAACTCAATTGA+TGG | + | chr5.1:18949783-18949802 | MS.gene72901:intron | 25.0% |
| !! | AAATTGAATTTTGGATGTTG+GGG | + | chr5.1:18946766-18946785 | MS.gene72901:intron | 25.0% |
| !! | ATCAATCTGGATTTTATGAT+TGG | + | chr5.1:18948552-18948571 | MS.gene72901:intron | 25.0% |
| !! | CCTTGCAATCTTTTTATAAA+TGG | + | chr5.1:18947107-18947126 | MS.gene72901:intron | 25.0% |
| !! | GAAATTGAATTTTGGATGTT+GGG | + | chr5.1:18946765-18946784 | MS.gene72901:intron | 25.0% |
| !! | TCAATCTGGATTTTATGATT+GGG | + | chr5.1:18948553-18948572 | MS.gene72901:intron | 25.0% |
| !! | TGAAATTGAATTTTGGATGT+TGG | + | chr5.1:18946764-18946783 | MS.gene72901:intron | 25.0% |
| !! | TTGTTGGAAACTGAAATTTT+GGG | + | chr5.1:18946806-18946825 | MS.gene72901:intron | 25.0% |
| !! | TTTGTTGGAAACTGAAATTT+TGG | + | chr5.1:18946805-18946824 | MS.gene72901:intron | 25.0% |
| !!! | AACTTTAAGGTACTTTCTAA+TGG | - | chr5.1:18948938-18948957 | None:intergenic | 25.0% |
| !!! | ATTTAGAATTAGGGTTTTGT+TGG | + | chr5.1:18946790-18946809 | MS.gene72901:intron | 25.0% |
| !!! | TGGATTTGTATTTTTGTTTG+GGG | + | chr5.1:18946842-18946861 | MS.gene72901:intron | 25.0% |
| !!! | TTTGTTTTTTAGGGTTTGAT+TGG | + | chr5.1:18946634-18946653 | MS.gene72901:intron | 25.0% |
| !!! | TTTTGTTTTGTTTGTGAAGT+TGG | + | chr5.1:18950562-18950581 | MS.gene72901:intron | 25.0% |
| AGATTTAGAGATCAATGAGT+TGG | + | chr5.1:18947379-18947398 | MS.gene72901:intron | 30.0% | |
| AGCCAAAATATCTACATCTT+TGG | - | chr5.1:18947070-18947089 | None:intergenic | 30.0% | |
| ATAAGAAACAGGGATATCAA+TGG | - | chr5.1:18947819-18947838 | None:intergenic | 30.0% | |
| ATAATCACCATCAATTGAGT+TGG | - | chr5.1:18949793-18949812 | None:intergenic | 30.0% | |
| ATATAGTAGTTATGCAACAC+AGG | + | chr5.1:18948652-18948671 | MS.gene72901:intron | 30.0% | |
| ATGTTATCACCAGAAGAATT+AGG | + | chr5.1:18950142-18950161 | MS.gene72901:intron | 30.0% | |
| ATTGGAATTGTGGTAAAGAT+CGG | + | chr5.1:18946652-18946671 | MS.gene72901:intron | 30.0% | |
| CAGAAGAATCAACTTAGTTT+AGG | - | chr5.1:18950184-18950203 | None:intergenic | 30.0% | |
| CATGCTCTTATGTTAATGTA+AGG | - | chr5.1:18948485-18948504 | None:intergenic | 30.0% | |
| CTTTAGTAGATTATGCAGTA+AGG | + | chr5.1:18947276-18947295 | MS.gene72901:intron | 30.0% | |
| GTAAATACTCACAATAGGAT+GGG | - | chr5.1:18949416-18949435 | None:intergenic | 30.0% | |
| GTCTGATGGAAATTATATTC+AGG | + | chr5.1:18949697-18949716 | MS.gene72901:CDS | 30.0% | |
| TAAAATCAACCTTCTCAAGT+TGG | + | chr5.1:18948005-18948024 | MS.gene72901:CDS | 30.0% | |
| TCGATATCAAGAATTATGTC+AGG | + | chr5.1:18949596-18949615 | MS.gene72901:CDS | 30.0% | |
| TGAAAGCTTACTACTTTGTA+TGG | - | chr5.1:18949965-18949984 | None:intergenic | 30.0% | |
| TGAACAGATAAAATCCTTAC+GGG | + | chr5.1:18950711-18950730 | MS.gene72901:CDS | 30.0% | |
| TGCATCTTAATGTATAGGAT+AGG | - | chr5.1:18948144-18948163 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACATTC+TGG | + | chr5.1:18947411-18947430 | MS.gene72901:intron | 30.0% | |
| TGTAAATACTCACAATAGGA+TGG | - | chr5.1:18949417-18949436 | None:intergenic | 30.0% | |
| TGTTTCTTAGTATTGTGTTG+TGG | + | chr5.1:18948861-18948880 | MS.gene72901:intron | 30.0% | |
| TTATATATCGGCATACAGAT+AGG | - | chr5.1:18948891-18948910 | None:intergenic | 30.0% | |
| ! | ATAATTTGAGACAGCACAAA+AGG | - | chr5.1:18948447-18948466 | None:intergenic | 30.0% |
| ! | ATGTTGGGGTATTTAGAATT+AGG | + | chr5.1:18946780-18946799 | MS.gene72901:intron | 30.0% |
| ! | ATTTTGCAGGCATTTAATTC+TGG | + | chr5.1:18949564-18949583 | MS.gene72901:CDS | 30.0% |
| ! | GACCAAAGATGTAGATATTT+TGG | + | chr5.1:18947065-18947084 | MS.gene72901:intron | 30.0% |
| ! | TGACGATTTTGTTGATGTTA+GGG | + | chr5.1:18946598-18946617 | MS.gene72901:intron | 30.0% |
| ! | TGTTGGGGTATTTAGAATTA+GGG | + | chr5.1:18946781-18946800 | MS.gene72901:intron | 30.0% |
| ! | TGTTTAGCTTCATTCTTCAA+TGG | + | chr5.1:18947743-18947762 | MS.gene72901:intron | 30.0% |
| !! | ATTTGTATTTTTGTTTGGGG+AGG | + | chr5.1:18946845-18946864 | MS.gene72901:intron | 30.0% |
| !! | TAGAAAGTACCTTAAAGTTC+AGG | + | chr5.1:18948939-18948958 | MS.gene72901:intron | 30.0% |
| !! | TATCAATCACGTTTTCAAGA+AGG | - | chr5.1:18947029-18947048 | None:intergenic | 30.0% |
| !! | TTTGTATTTTTGTTTGGGGA+GGG | + | chr5.1:18946846-18946865 | MS.gene72901:intron | 30.0% |
| !!! | ATGATGGGTTAAGATTTTAG+CGG | + | chr5.1:18946875-18946894 | MS.gene72901:intron | 30.0% |
| AAAACTCAGCAAATTCCTGA+CGG | - | chr5.1:18948314-18948333 | None:intergenic | 35.0% | |
| AAAGGAATGCAAGAATCTTC+TGG | + | chr5.1:18948197-18948216 | MS.gene72901:CDS | 35.0% | |
| AATTTCTTCACTCTGCTTGT+TGG | + | chr5.1:18949466-18949485 | MS.gene72901:intron | 35.0% | |
| AGAAAACAGCCTAATTCTTC+TGG | - | chr5.1:18950154-18950173 | None:intergenic | 35.0% | |
| AGTAAGGAAAGTAGATCAGA+TGG | + | chr5.1:18947231-18947250 | MS.gene72901:intron | 35.0% | |
| ATATCAATGGCAAACACAGA+AGG | - | chr5.1:18947806-18947825 | None:intergenic | 35.0% | |
| ATCACATTCTTTGCTTCTGA+TGG | + | chr5.1:18947561-18947580 | MS.gene72901:intron | 35.0% | |
| ATCTGTACCAGAAGAAGTTA+TGG | + | chr5.1:18946402-18946421 | MS.gene72901:CDS | 35.0% | |
| ATTTGGGAGTTTAGTTGAGA+CGG | + | chr5.1:18946575-18946594 | MS.gene72901:intron | 35.0% | |
| CAAACCAGAGCAATTTCTAA+TGG | - | chr5.1:18950426-18950445 | None:intergenic | 35.0% | |
| CAACTATCATCAGAGACAAA+GGG | + | chr5.1:18949084-18949103 | MS.gene72901:intron | 35.0% | |
| CATTAGAAATTGCTCTGGTT+TGG | + | chr5.1:18950424-18950443 | MS.gene72901:intron | 35.0% | |
| CTGATCTACTTTCCTTACTA+CGG | - | chr5.1:18947230-18947249 | None:intergenic | 35.0% | |
| CTTAACTACCATTAAGACCT+AGG | - | chr5.1:18949036-18949055 | None:intergenic | 35.0% | |
| GAGTATTCTTACTTAGGATC+AGG | + | chr5.1:18947930-18947949 | MS.gene72901:intron | 35.0% | |
| GCAGAAACACCTGATTTAAT+TGG | + | chr5.1:18950787-18950806 | MS.gene72901:CDS | 35.0% | |
| GGCATTTAATTCTGGTGATT+TGG | + | chr5.1:18949572-18949591 | MS.gene72901:CDS | 35.0% | |
| GGTATAATTGATCAAGTGGA+GGG | + | chr5.1:18950646-18950665 | MS.gene72901:CDS | 35.0% | |
| GTCTTTCGATTCCTATTTCA+GGG | + | chr5.1:18950397-18950416 | MS.gene72901:intron | 35.0% | |
| GTGTATTTGGACCTGAAAAA+CGG | - | chr5.1:18946468-18946487 | None:intergenic | 35.0% | |
| GTTGGACACAGATTAATGTT+GGG | - | chr5.1:18948969-18948988 | None:intergenic | 35.0% | |
| GTTGTCGAAATCATCACATT+CGG | + | chr5.1:18949738-18949757 | MS.gene72901:intron | 35.0% | |
| GTTTCCATTAGAAATTGCTC+TGG | + | chr5.1:18950419-18950438 | MS.gene72901:intron | 35.0% | |
| TAGCAAATCTTCTCCATCAT+TGG | + | chr5.1:18947602-18947621 | MS.gene72901:intron | 35.0% | |
| TCAAAATGAACAGAAGCTGT+TGG | + | chr5.1:18949656-18949675 | MS.gene72901:CDS | 35.0% | |
| TCAACTATCATCAGAGACAA+AGG | + | chr5.1:18949083-18949102 | MS.gene72901:intron | 35.0% | |
| TCACATTCTTTGCTTCTGAT+GGG | + | chr5.1:18947562-18947581 | MS.gene72901:intron | 35.0% | |
| TCTAATGGAAACCCTGAAAT+AGG | - | chr5.1:18950411-18950430 | None:intergenic | 35.0% | |
| TGAACAATGGTTTCCAATGA+TGG | - | chr5.1:18947618-18947637 | None:intergenic | 35.0% | |
| TGAATGGTACAATTCTCTTG+CGG | + | chr5.1:18946379-18946398 | MS.gene72901:CDS | 35.0% | |
| TGTCTTTCGATTCCTATTTC+AGG | + | chr5.1:18950396-18950415 | MS.gene72901:intron | 35.0% | |
| TGTTGGACACAGATTAATGT+TGG | - | chr5.1:18948970-18948989 | None:intergenic | 35.0% | |
| TTACAGATAGGCTCTTCATA+AGG | - | chr5.1:18949903-18949922 | None:intergenic | 35.0% | |
| TTAGGGTTTGATTGGAATTG+TGG | + | chr5.1:18946642-18946661 | MS.gene72901:intron | 35.0% | |
| TTCAAGTCGAACTTACAGAT+AGG | - | chr5.1:18949915-18949934 | None:intergenic | 35.0% | |
| ! | AGCCAAACATCCATTTTCTA+GGG | + | chr5.1:18948516-18948535 | MS.gene72901:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.1:18947391-18947410 | MS.gene72901:intron | 35.0% |
| ! | GAAGATTCTTGCATTCCTTT+TGG | - | chr5.1:18948197-18948216 | None:intergenic | 35.0% |
| ! | GAGTGAAAAGAGAGTGTATT+TGG | - | chr5.1:18946481-18946500 | None:intergenic | 35.0% |
| ! | GCAAGAATCTTCTGGAAAAT+GGG | + | chr5.1:18948205-18948224 | MS.gene72901:CDS | 35.0% |
| ! | GTGACGATTTTGTTGATGTT+AGG | + | chr5.1:18946597-18946616 | MS.gene72901:intron | 35.0% |
| ! | TAGCCAAACATCCATTTTCT+AGG | + | chr5.1:18948515-18948534 | MS.gene72901:intron | 35.0% |
| ! | TGAGGGTATAATTGATCAAG+TGG | + | chr5.1:18950642-18950661 | MS.gene72901:CDS | 35.0% |
| ! | TGCAAGAATCTTCTGGAAAA+TGG | + | chr5.1:18948204-18948223 | MS.gene72901:CDS | 35.0% |
| ! | TGTTCATTTTGAACTAGTGC+TGG | - | chr5.1:18949648-18949667 | None:intergenic | 35.0% |
| ! | TTGACGGAGTATTCTTACTT+AGG | + | chr5.1:18947924-18947943 | MS.gene72901:intron | 35.0% |
| !! | ACTTTTGAGTGAATGGGTTT+AGG | + | chr5.1:18946676-18946695 | MS.gene72901:intron | 35.0% |
| !! | AGAAGAATTAGGCTGTTTTC+TGG | + | chr5.1:18950153-18950172 | MS.gene72901:intron | 35.0% |
| !! | ATCGGAACTTTTGAGTGAAT+GGG | + | chr5.1:18946670-18946689 | MS.gene72901:intron | 35.0% |
| !! | ATGGCTCTACTATATTTTGC+AGG | + | chr5.1:18949551-18949570 | MS.gene72901:CDS | 35.0% |
| !! | ATTCAGTAGCGTTGATCTTT+AGG | + | chr5.1:18950108-18950127 | MS.gene72901:intron | 35.0% |
| !! | CAAAAGTGCTCTTCTCTATT+TGG | + | chr5.1:18948335-18948354 | MS.gene72901:CDS | 35.0% |
| !! | CTTTTGAGTGAATGGGTTTA+GGG | + | chr5.1:18946677-18946696 | MS.gene72901:intron | 35.0% |
| !! | GTTGATTTTAGTCTCGAAGT+CGG | - | chr5.1:18947995-18948014 | None:intergenic | 35.0% |
| !!! | GAGTGTCTTTATTTTCAACG+AGG | + | chr5.1:18947493-18947512 | MS.gene72901:intron | 35.0% |
| !!! | GGGTTTAGGGTTATTTCTTT+TGG | + | chr5.1:18946690-18946709 | MS.gene72901:intron | 35.0% |
| AAAATCCTTACGGGATCGAT+TGG | + | chr5.1:18950720-18950739 | MS.gene72901:CDS | 40.0% | |
| AAACTCAGCAAATTCCTGAC+GGG | - | chr5.1:18948313-18948332 | None:intergenic | 40.0% | |
| AAGGAAAGTAGATCAGATGG+AGG | + | chr5.1:18947234-18947253 | MS.gene72901:intron | 40.0% | |
| AAGTAGATCAGATGGAGGAT+AGG | + | chr5.1:18947239-18947258 | MS.gene72901:intron | 40.0% | |
| ACCCTGCTTCATTTGTCAAT+CGG | + | chr5.1:18950043-18950062 | MS.gene72901:intron | 40.0% | |
| ACCTAAGCCATTCGACAAAT+GGG | - | chr5.1:18947174-18947193 | None:intergenic | 40.0% | |
| ACCTTGCTCAAGCTTGAATA+AGG | - | chr5.1:18948172-18948191 | None:intergenic | 40.0% | |
| AGACAAGCGAAACAGTATGT+TGG | - | chr5.1:18950381-18950400 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr5.1:18947292-18947311 | MS.gene72901:intron | 40.0% | |
| AGTAGTAAGCTTTCAACTCG+TGG | + | chr5.1:18949970-18949989 | MS.gene72901:intron | 40.0% | |
| AGTCAGATCAAAAGAGGTAG+AGG | + | chr5.1:18947320-18947339 | MS.gene72901:intron | 40.0% | |
| AGTTTCTCCCCTTATCAATC+TGG | + | chr5.1:18948539-18948558 | MS.gene72901:intron | 40.0% | |
| ATTCCAGGTTCATCTGATTG+AGG | + | chr5.1:18950624-18950643 | MS.gene72901:intron | 40.0% | |
| ATTCTTACTTAGGATCAGGC+TGG | + | chr5.1:18947934-18947953 | MS.gene72901:intron | 40.0% | |
| CAAAATGTGCCAACTTGAGA+AGG | - | chr5.1:18948017-18948036 | None:intergenic | 40.0% | |
| CACAGAAGGTAATAGATGAG+TGG | - | chr5.1:18947792-18947811 | None:intergenic | 40.0% | |
| CAGGACAGAGATATGATATG+TGG | + | chr5.1:18948671-18948690 | MS.gene72901:intron | 40.0% | |
| CTATTTGGCATACACATCAG+TGG | + | chr5.1:18948350-18948369 | MS.gene72901:CDS | 40.0% | |
| CTCCCTAGAAAATGGATGTT+TGG | - | chr5.1:18948521-18948540 | None:intergenic | 40.0% | |
| GACAGATTAAGAGCCTTCTA+GGG | + | chr5.1:18949511-18949530 | MS.gene72901:intron | 40.0% | |
| GAGACAAAGGGTAACCTAAT+TGG | + | chr5.1:18949096-18949115 | MS.gene72901:intron | 40.0% | |
| GAGGATAGTCAGATCAAAAG+AGG | + | chr5.1:18947314-18947333 | MS.gene72901:intron | 40.0% | |
| GATCAACATTCTGTGTCTGA+TGG | + | chr5.1:18949683-18949702 | MS.gene72901:CDS | 40.0% | |
| GGACAGCATAGAAATCTTTG+TGG | - | chr5.1:18949155-18949174 | None:intergenic | 40.0% | |
| GGGGATAACATCTACAACTT+TGG | + | chr5.1:18949379-18949398 | MS.gene72901:CDS | 40.0% | |
| GGGTATAATTGATCAAGTGG+AGG | + | chr5.1:18950645-18950664 | MS.gene72901:CDS | 40.0% | |
| GTAGTAAGCTTTCAACTCGT+GGG | + | chr5.1:18949971-18949990 | MS.gene72901:intron | 40.0% | |
| TAATAGCTCGCATACACAGT+TGG | - | chr5.1:18948264-18948283 | None:intergenic | 40.0% | |
| TACCTAAGCCATTCGACAAA+TGG | - | chr5.1:18947175-18947194 | None:intergenic | 40.0% | |
| TCAATATCACAAATCCCGTC+AGG | + | chr5.1:18948296-18948315 | MS.gene72901:CDS | 40.0% | |
| TCGAATGGCTTAGGTAGTTT+GGG | + | chr5.1:18947179-18947198 | MS.gene72901:intron | 40.0% | |
| TGTGTATGCGAGCTATTACT+GGG | + | chr5.1:18948266-18948285 | MS.gene72901:CDS | 40.0% | |
| TGTTCAATACCCAGAACTCT+TGG | - | chr5.1:18950697-18950716 | None:intergenic | 40.0% | |
| TTCCAGGTTCATCTGATTGA+GGG | + | chr5.1:18950625-18950644 | MS.gene72901:intron | 40.0% | |
| TTCCTTACTACGGAATCTAC+AGG | - | chr5.1:18947220-18947239 | None:intergenic | 40.0% | |
| TTGGGCATTCCTGAACTTTA+AGG | - | chr5.1:18948951-18948970 | None:intergenic | 40.0% | |
| ! | CTGCCATTGGTTATCTTGAA+GGG | + | chr5.1:18948073-18948092 | MS.gene72901:CDS | 40.0% |
| ! | GATGTTTCTGCTTCAAGTAG+TGG | + | chr5.1:18949241-18949260 | MS.gene72901:intron | 40.0% |
| ! | TGATGGTGATTATTTGCAGC+CGG | + | chr5.1:18949800-18949819 | MS.gene72901:intron | 40.0% |
| ! | TGCCATTGGTTATCTTGAAG+GGG | + | chr5.1:18948074-18948093 | MS.gene72901:CDS | 40.0% |
| ! | TTTTTCCCCCATTTGTCGAA+TGG | + | chr5.1:18947164-18947183 | MS.gene72901:intron | 40.0% |
| !! | GATCGGAACTTTTGAGTGAA+TGG | + | chr5.1:18946669-18946688 | MS.gene72901:intron | 40.0% |
| !!! | GGTTATTTCTTTTGGATCCG+AGG | + | chr5.1:18946698-18946717 | MS.gene72901:intron | 40.0% |
| AAGCTTTCAACTCGTGGGTT+GGG | + | chr5.1:18949976-18949995 | MS.gene72901:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.1:18947295-18947314 | MS.gene72901:intron | 45.0% | |
| AGCCGATTGACAAATGAAGC+AGG | - | chr5.1:18950048-18950067 | None:intergenic | 45.0% | |
| AGGAAGTTGGGTAGGGTTTA+GGG | + | chr5.1:18946718-18946737 | MS.gene72901:intron | 45.0% | |
| CCTAAGCCATTCGACAAATG+GGG | - | chr5.1:18947173-18947192 | None:intergenic | 45.0% | |
| CGACAGATTAAGAGCCTTCT+AGG | + | chr5.1:18949510-18949529 | MS.gene72901:intron | 45.0% | |
| CGCTCTGCAATAACACTCAA+GGG | - | chr5.1:18949847-18949866 | None:intergenic | 45.0% | |
| CTAAGCCATTCGACAAATGG+GGG | - | chr5.1:18947172-18947191 | None:intergenic | 45.0% | |
| CTGTGTATGCGAGCTATTAC+TGG | + | chr5.1:18948265-18948284 | MS.gene72901:CDS | 45.0% | |
| CTTATCCAACTAAGCGAGGT+CGG | - | chr5.1:18947456-18947475 | None:intergenic | 45.0% | |
| GACCCCTTCAAGATAACCAA+TGG | - | chr5.1:18948079-18948098 | None:intergenic | 45.0% | |
| GACCTGTAGATTCCGTAGTA+AGG | + | chr5.1:18947215-18947234 | MS.gene72901:intron | 45.0% | |
| GAGAACTTCGAAGCGATTCA+AGG | - | chr5.1:18946346-18946365 | None:intergenic | 45.0% | |
| GCAACTAGCAAGCATTAGCA+TGG | - | chr5.1:18950216-18950235 | None:intergenic | 45.0% | |
| GCCGATTGACAAATGAAGCA+GGG | - | chr5.1:18950047-18950066 | None:intergenic | 45.0% | |
| GCTGATGCCATAACTTCTTC+TGG | - | chr5.1:18946412-18946431 | None:intergenic | 45.0% | |
| GGAATAGTTCGATCTTCCGA+AGG | - | chr5.1:18949826-18949845 | None:intergenic | 45.0% | |
| GGGAGAAACTCCCTAGAAAA+TGG | - | chr5.1:18948529-18948548 | None:intergenic | 45.0% | |
| GTCGAATGGCTTAGGTAGTT+TGG | + | chr5.1:18947178-18947197 | MS.gene72901:intron | 45.0% | |
| GTGTTGCATTGCATTCGTGT+TGG | - | chr5.1:18948987-18949006 | None:intergenic | 45.0% | |
| TAAACCCTACCCAACTTCCT+CGG | - | chr5.1:18946718-18946737 | None:intergenic | 45.0% | |
| TAAGCTTTCAACTCGTGGGT+TGG | + | chr5.1:18949975-18949994 | MS.gene72901:intron | 45.0% | |
| TACCCTCAATCAGATGAACC+TGG | - | chr5.1:18950630-18950649 | None:intergenic | 45.0% | |
| TAGACAGGCTAAGGATGCAA+TGG | - | chr5.1:18947533-18947552 | None:intergenic | 45.0% | |
| TCGCTCTGCAATAACACTCA+AGG | - | chr5.1:18949848-18949867 | None:intergenic | 45.0% | |
| TCGCTTAGTTGGATAAGGCT+TGG | + | chr5.1:18947459-18947478 | MS.gene72901:intron | 45.0% | |
| TCTCTCTGACTCATTCAAGC+TGG | + | chr5.1:18948377-18948396 | MS.gene72901:CDS | 45.0% | |
| TCTGAGAAAGAAGCTGCCAT+TGG | + | chr5.1:18948060-18948079 | MS.gene72901:CDS | 45.0% | |
| TGTACCATTCACCGAGTTCA+GGG | - | chr5.1:18946370-18946389 | None:intergenic | 45.0% | |
| TTGCTGTGATGGTTTCTCGA+CGG | + | chr5.1:18948034-18948053 | MS.gene72901:CDS | 45.0% | |
| TTGTACCATTCACCGAGTTC+AGG | - | chr5.1:18946371-18946390 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCAACTAAGCG+AGG | - | chr5.1:18947460-18947479 | None:intergenic | 45.0% |
| ! | CTTTTGGATCCGAGGAAGTT+GGG | + | chr5.1:18946706-18946725 | MS.gene72901:intron | 45.0% |
| ! | GCCTTATTCAAGCTTGAGCA+AGG | + | chr5.1:18948168-18948187 | MS.gene72901:CDS | 45.0% |
| ! | GCTGCCATTGGTTATCTTGA+AGG | + | chr5.1:18948072-18948091 | MS.gene72901:CDS | 45.0% |
| ! | GTTGGATAAGGCTTGGTTGT+TGG | + | chr5.1:18947466-18947485 | MS.gene72901:intron | 45.0% |
| ! | TCTTTTGGATCCGAGGAAGT+TGG | + | chr5.1:18946705-18946724 | MS.gene72901:intron | 45.0% |
| !! | GTTGGCACATTTTGCTGTGA+TGG | + | chr5.1:18948023-18948042 | MS.gene72901:CDS | 45.0% |
| !!! | TCTTGCTCTTGCCGTTTTTC+AGG | + | chr5.1:18946454-18946473 | MS.gene72901:CDS | 45.0% |
| AGGGCACAGTACATGTTTCC+TGG | + | chr5.1:18950665-18950684 | MS.gene72901:CDS | 50.0% | |
| CCCCATTTGTCGAATGGCTT+AGG | + | chr5.1:18947170-18947189 | MS.gene72901:intron | 50.0% | |
| CGAAGTTCTCACCCTGAACT+CGG | + | chr5.1:18946356-18946375 | MS.gene72901:CDS | 50.0% | |
| CGACCTCGCTTAGTTGGATA+AGG | + | chr5.1:18947454-18947473 | MS.gene72901:intron | 50.0% | |
| CTGCTTCAAGTAGTGGTCAG+AGG | + | chr5.1:18949248-18949267 | MS.gene72901:intron | 50.0% | |
| GAGGAAGTTGGGTAGGGTTT+AGG | + | chr5.1:18946717-18946736 | MS.gene72901:intron | 50.0% | |
| GATTATTTGCAGCCGGCCTT+CGG | + | chr5.1:18949807-18949826 | MS.gene72901:intron | 50.0% | |
| GCTTGAGCAAGGTGACCAAA+AGG | + | chr5.1:18948179-18948198 | MS.gene72901:CDS | 50.0% | |
| GGGCACAGTACATGTTTCCT+GGG | + | chr5.1:18950666-18950685 | MS.gene72901:CDS | 50.0% | |
| TAGTTCGATCTTCCGAAGGC+CGG | - | chr5.1:18949822-18949841 | None:intergenic | 50.0% | |
| TCCTTACGGGATCGATTGGA+CGG | + | chr5.1:18950724-18950743 | MS.gene72901:CDS | 50.0% | |
| TCGTGCGTCCTAGGTCTTAA+TGG | + | chr5.1:18949025-18949044 | MS.gene72901:intron | 50.0% | |
| TGGGGAGGGATGTGAATGAT+GGG | + | chr5.1:18946860-18946879 | MS.gene72901:intron | 50.0% | |
| TGGGTGCAACCAAGAGTTCT+GGG | + | chr5.1:18950685-18950704 | MS.gene72901:CDS | 50.0% | |
| TTCTATGCGCTGCTCTCTAG+TGG | - | chr5.1:18948118-18948137 | None:intergenic | 50.0% | |
| TTGGGGAGGGATGTGAATGA+TGG | + | chr5.1:18946859-18946878 | MS.gene72901:intron | 50.0% | |
| TTGTCCCTTTCTGCTCTGCT+GGG | + | chr5.1:18949358-18949377 | MS.gene72901:CDS | 50.0% | |
| ! | ATCAGGTGTTTCTGCCTCGA+TGG | - | chr5.1:18950782-18950801 | None:intergenic | 50.0% |
| ! | TTGGACCGGAAAAGTACACG+CGG | + | chr5.1:18950747-18950766 | MS.gene72901:CDS | 50.0% |
| !! | AGCCATTCCACTTTTGACCC+TGG | - | chr5.1:18949537-18949556 | None:intergenic | 50.0% |
| !! | ATTAAGAGCCTTCTAGGGCC+AGG | + | chr5.1:18949516-18949535 | MS.gene72901:CDS | 50.0% |
| !! | TTAAGAGCCTTCTAGGGCCA+GGG | + | chr5.1:18949517-18949536 | MS.gene72901:CDS | 50.0% |
| ACCGTCCAATCGATCCCGTA+AGG | - | chr5.1:18950728-18950747 | None:intergenic | 55.0% | |
| ACTAAGCGAGGTCGGCTACA+TGG | - | chr5.1:18947448-18947467 | None:intergenic | 55.0% | |
| ATCCCCCAGCAGAGCAGAAA+GGG | - | chr5.1:18949365-18949384 | None:intergenic | 55.0% | |
| CAGAACTCTTGGTTGCACCC+AGG | - | chr5.1:18950686-18950705 | None:intergenic | 55.0% | |
| CTGGGTGCAACCAAGAGTTC+TGG | + | chr5.1:18950684-18950703 | MS.gene72901:CDS | 55.0% | |
| CTTGTCCCTTTCTGCTCTGC+TGG | + | chr5.1:18949357-18949376 | MS.gene72901:CDS | 55.0% | |
| GATCGATTGGACGGTTGGAC+CGG | + | chr5.1:18950733-18950752 | MS.gene72901:CDS | 55.0% | |
| GGATCCGAGGAAGTTGGGTA+GGG | + | chr5.1:18946711-18946730 | MS.gene72901:intron | 55.0% | |
| GGCCAGGGTCAAAAGTGGAA+TGG | + | chr5.1:18949532-18949551 | MS.gene72901:CDS | 55.0% | |
| TACGGGATCGATTGGACGGT+TGG | + | chr5.1:18950728-18950747 | MS.gene72901:CDS | 55.0% | |
| TATCCCCCAGCAGAGCAGAA+AGG | - | chr5.1:18949366-18949385 | None:intergenic | 55.0% | |
| TGGATCCGAGGAAGTTGGGT+AGG | + | chr5.1:18946710-18946729 | MS.gene72901:intron | 55.0% | |
| TGTAGCCGACCTCGCTTAGT+TGG | + | chr5.1:18947448-18947467 | MS.gene72901:intron | 55.0% | |
| TGTCCCTTTCTGCTCTGCTG+GGG | + | chr5.1:18949359-18949378 | MS.gene72901:CDS | 55.0% | |
| TTGAGCTGTTCGTGCGTCCT+AGG | + | chr5.1:18949016-18949035 | MS.gene72901:intron | 55.0% | |
| ! | CAACGCCGCGTGTACTTTTC+CGG | - | chr5.1:18950755-18950774 | None:intergenic | 55.0% |
| ! | CTCACCCTGAACTCGGTGAA+TGG | + | chr5.1:18946363-18946382 | MS.gene72901:CDS | 55.0% |
| ! | CTTTTGACCCTGGCCCTAGA+AGG | - | chr5.1:18949527-18949546 | None:intergenic | 55.0% |
| ! | TCTAGGGCCAGGGTCAAAAG+TGG | + | chr5.1:18949527-18949546 | MS.gene72901:CDS | 55.0% |
| GTCCCTTTCTGCTCTGCTGG+GGG | + | chr5.1:18949360-18949379 | MS.gene72901:CDS | 60.0% | |
| CGCGGCGTTGTTGTCCATCG+AGG | + | chr5.1:18950765-18950784 | MS.gene72901:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 18946326 | 18950816 | 18946326 | ID=MS.gene72901 |
| chr5.1 | mRNA | 18946326 | 18950816 | 18946326 | ID=MS.gene72901.t1;Parent=MS.gene72901 |
| chr5.1 | exon | 18946326 | 18946475 | 18946326 | ID=MS.gene72901.t1.exon1;Parent=MS.gene72901.t1 |
| chr5.1 | CDS | 18946326 | 18946475 | 18946326 | ID=cds.MS.gene72901.t1;Parent=MS.gene72901.t1 |
| chr5.1 | exon | 18947952 | 18948398 | 18947952 | ID=MS.gene72901.t1.exon2;Parent=MS.gene72901.t1 |
| chr5.1 | CDS | 18947952 | 18948398 | 18947952 | ID=cds.MS.gene72901.t1;Parent=MS.gene72901.t1 |
| chr5.1 | exon | 18949343 | 18949423 | 18949343 | ID=MS.gene72901.t1.exon3;Parent=MS.gene72901.t1 |
| chr5.1 | CDS | 18949343 | 18949423 | 18949343 | ID=cds.MS.gene72901.t1;Parent=MS.gene72901.t1 |
| chr5.1 | exon | 18949516 | 18949718 | 18949516 | ID=MS.gene72901.t1.exon4;Parent=MS.gene72901.t1 |
| chr5.1 | CDS | 18949516 | 18949718 | 18949516 | ID=cds.MS.gene72901.t1;Parent=MS.gene72901.t1 |
| chr5.1 | exon | 18949819 | 18949918 | 18949819 | ID=MS.gene72901.t1.exon5;Parent=MS.gene72901.t1 |
| chr5.1 | CDS | 18949819 | 18949918 | 18949819 | ID=cds.MS.gene72901.t1;Parent=MS.gene72901.t1 |
| chr5.1 | exon | 18950631 | 18950816 | 18950631 | ID=MS.gene72901.t1.exon6;Parent=MS.gene72901.t1 |
| chr5.1 | CDS | 18950631 | 18950816 | 18950631 | ID=cds.MS.gene72901.t1;Parent=MS.gene72901.t1 |
| Gene Sequence |
| Protein sequence |
