Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24375.t1 | XP_003589235.1 | 100 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 3.20E-174 | 620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24375.t1 | Q9LT08 | 95.8 | 310 | 11 | 2 | 4 | 313 | 1 | 308 | 5.1e-165 | 581.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24375.t1 | G7I4G9 | 100.0 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 2.3e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene24375 | 0.837084 | 6.40E-57 | -1.69E-46 |
| MS.gene049283 | MS.gene24375 | 0.845375 | 4.22E-59 | -1.69E-46 |
| MS.gene049368 | MS.gene24375 | 0.823547 | 1.31E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene24375 | 0.86076 | 1.65E-63 | -1.69E-46 |
| MS.gene050085 | MS.gene24375 | 0.802295 | 6.00E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene24375 | 0.821684 | 3.54E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene24375 | 0.809692 | 1.67E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene24375 | 0.813406 | 2.60E-51 | -1.69E-46 |
| MS.gene050571 | MS.gene24375 | 0.820564 | 6.42E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene24375 | 0.83423 | 3.38E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene24375 | 0.852715 | 3.85E-61 | -1.69E-46 |
| MS.gene050689 | MS.gene24375 | 0.832282 | 1.03E-55 | -1.69E-46 |
| MS.gene050752 | MS.gene24375 | 0.815865 | 7.43E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene24375 | 0.804041 | 2.61E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene24375 | 0.823556 | 1.30E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene24375 | 0.83101 | 2.13E-55 | -1.69E-46 |
| MS.gene050945 | MS.gene24375 | 0.824831 | 6.52E-54 | -1.69E-46 |
| MS.gene050955 | MS.gene24375 | 0.80384 | 2.88E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene24375 | 0.880098 | 7.26E-70 | -1.69E-46 |
| MS.gene051233 | MS.gene24375 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene24375 | 0.85772 | 1.35E-62 | -1.69E-46 |
| MS.gene051343 | MS.gene24375 | 0.852261 | 5.19E-61 | -1.69E-46 |
| MS.gene051381 | MS.gene24375 | 0.81368 | 2.26E-51 | -1.69E-46 |
| MS.gene051628 | MS.gene24375 | 0.800582 | 1.35E-48 | -1.69E-46 |
| MS.gene05188 | MS.gene24375 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene24375 | 0.84496 | 5.47E-59 | -1.69E-46 |
| MS.gene052072 | MS.gene24375 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene052242 | MS.gene24375 | -0.802321 | 5.93E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene24375 | 0.845976 | 2.90E-59 | -1.69E-46 |
| MS.gene052342 | MS.gene24375 | 0.844803 | 6.03E-59 | -1.69E-46 |
| MS.gene052434 | MS.gene24375 | 0.82085 | 5.51E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene24375 | 0.839096 | 1.94E-57 | -1.69E-46 |
| MS.gene052516 | MS.gene24375 | 0.832817 | 7.61E-56 | -1.69E-46 |
| MS.gene052533 | MS.gene24375 | 0.808722 | 2.69E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene24375 | 0.824913 | 6.24E-54 | -1.69E-46 |
| MS.gene053058 | MS.gene24375 | 0.848564 | 5.65E-60 | -1.69E-46 |
| MS.gene053079 | MS.gene24375 | 0.82477 | 6.74E-54 | -1.69E-46 |
| MS.gene053456 | MS.gene24375 | 0.811329 | 7.39E-51 | -1.69E-46 |
| MS.gene053564 | MS.gene24375 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene24375 | 0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene24375 | 0.806399 | 8.38E-50 | -1.69E-46 |
| MS.gene054178 | MS.gene24375 | 0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene24375 | 0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene24375 | 0.819713 | 1.01E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene24375 | 0.825021 | 5.88E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene24375 | 0.831618 | 1.51E-55 | -1.69E-46 |
| MS.gene054957 | MS.gene24375 | 0.812516 | 4.08E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene24375 | 0.817406 | 3.35E-52 | -1.69E-46 |
| MS.gene055222 | MS.gene24375 | 0.817957 | 2.52E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene24375 | 0.847344 | 1.23E-59 | -1.69E-46 |
| MS.gene055864 | MS.gene24375 | 0.8202 | 7.78E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene24375 | 0.816749 | 4.71E-52 | -1.69E-46 |
| MS.gene056097 | MS.gene24375 | 0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene24375 | 0.83447 | 2.94E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene24375 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene24375 | 0.858307 | 9.01E-63 | -1.69E-46 |
| MS.gene056776 | MS.gene24375 | 0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene24375 | 0.830398 | 3.00E-55 | -1.69E-46 |
| MS.gene056831 | MS.gene24375 | 0.829952 | 3.86E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene24375 | 0.816869 | 4.43E-52 | -1.69E-46 |
| MS.gene057034 | MS.gene24375 | 0.835259 | 1.86E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene24375 | 0.836962 | 6.88E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene24375 | 0.824307 | 8.67E-54 | -1.69E-46 |
| MS.gene057320 | MS.gene24375 | 0.811778 | 5.91E-51 | -1.69E-46 |
| MS.gene057890 | MS.gene24375 | -0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene24375 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene24375 | 0.825429 | 4.71E-54 | -1.69E-46 |
| MS.gene058008 | MS.gene24375 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene24375 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene24375 | 0.805228 | 1.48E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene24375 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene24375 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene24375 | 0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene058355 | MS.gene24375 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene24375 | 0.800021 | 1.75E-48 | -1.69E-46 |
| MS.gene058783 | MS.gene24375 | 0.807588 | 4.70E-50 | -1.69E-46 |
| MS.gene058976 | MS.gene24375 | 0.818598 | 1.80E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene24375 | 0.87309 | 1.93E-67 | -1.69E-46 |
| MS.gene059170 | MS.gene24375 | 0.824258 | 8.90E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene24375 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene24375 | 0.801856 | 7.39E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene24375 | -0.826059 | 3.34E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene24375 | 0.831568 | 1.55E-55 | -1.69E-46 |
| MS.gene060244 | MS.gene24375 | 0.811575 | 6.54E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene24375 | 0.850445 | 1.69E-60 | -1.69E-46 |
| MS.gene060777 | MS.gene24375 | 0.813034 | 3.14E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene24375 | 0.839085 | 1.96E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene24375 | 0.802068 | 6.69E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene24375 | 0.832209 | 1.08E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene24375 | 0.840254 | 9.71E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene24375 | 0.844846 | 5.87E-59 | -1.69E-46 |
| MS.gene061160 | MS.gene24375 | 0.857861 | 1.22E-62 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24375.t1 | MTR_1g019930 | 100.000 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 0.0 | 650 |
| MS.gene24375.t1 | MTR_2g017680 | 99.032 | 310 | 2 | 1 | 4 | 313 | 1 | 309 | 0.0 | 636 |
| MS.gene24375.t1 | MTR_3g108790 | 42.029 | 207 | 107 | 9 | 33 | 234 | 58 | 256 | 3.00e-35 | 131 |
| MS.gene24375.t1 | MTR_8g006640 | 62.857 | 35 | 13 | 0 | 102 | 136 | 29 | 63 | 2.32e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24375.t1 | AT5G23540 | 95.806 | 310 | 11 | 2 | 4 | 313 | 1 | 308 | 0.0 | 611 |
| MS.gene24375.t1 | AT5G23540 | 97.683 | 259 | 6 | 0 | 55 | 313 | 1 | 259 | 0.0 | 528 |
| MS.gene24375.t1 | AT1G71230 | 40.566 | 212 | 103 | 8 | 33 | 234 | 57 | 255 | 3.51e-34 | 128 |
| MS.gene24375.t1 | AT1G22920 | 39.806 | 206 | 113 | 8 | 33 | 234 | 57 | 255 | 1.61e-32 | 124 |
| MS.gene24375.t1 | AT1G22920 | 39.806 | 206 | 113 | 8 | 33 | 234 | 57 | 255 | 2.08e-32 | 123 |
| MS.gene24375.t1 | AT5G27607 | 76.596 | 47 | 11 | 0 | 100 | 146 | 70 | 116 | 2.56e-19 | 82.4 |
Find 83 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTGGCTGCTGGCTTTC+CGG | 0.193654 | 1.1:+3297780 | MS.gene24375:CDS |
| CACATCCTGGATTTGGCTGC+TGG | 0.286015 | 1.1:+3297772 | MS.gene24375:CDS |
| CTGCACTGCCTTGTTGTACT+TGG | 0.295287 | 1.1:-3299614 | None:intergenic |
| AGGTGGTCATTGATGCTTTC+CGG | 0.296529 | 1.1:+3298687 | MS.gene24375:CDS |
| TATCATTCACATCCTGGATT+TGG | 0.322391 | 1.1:+3297765 | MS.gene24375:CDS |
| TCAAACATTGTTCAGACTTT+GGG | 0.328260 | 1.1:+3299736 | MS.gene24375:CDS |
| GAAGTTATGGGTTTGATGTT+GGG | 0.328891 | 1.1:+3296537 | MS.gene24375:CDS |
| GATCCTATTCAGAGTGTTAA+AGG | 0.332585 | 1.1:+3298662 | MS.gene24375:CDS |
| TGGTGTACCTATGGAAGTTA+TGG | 0.339817 | 1.1:+3296524 | MS.gene24375:CDS |
| ATCAAACATTGTTCAGACTT+TGG | 0.343443 | 1.1:+3299735 | MS.gene24375:CDS |
| GGAAGTTATGGGTTTGATGT+TGG | 0.345452 | 1.1:+3296536 | MS.gene24375:CDS |
| AAGACACTCACTTGGATAGA+TGG | 0.346214 | 1.1:-3298785 | None:intergenic |
| ACTCAATAGCAATCAATTAC+AGG | 0.372816 | 1.1:+3298923 | MS.gene24375:CDS |
| TTGCCTTTAACACTCTGAAT+AGG | 0.383773 | 1.1:-3298665 | None:intergenic |
| AAACTTGCTCAGATGAATCT+AGG | 0.385066 | 1.1:-3296344 | None:intergenic |
| CTTGATATGTTGAAACAAAC+TGG | 0.388419 | 1.1:+3296669 | MS.gene24375:CDS |
| GGTGTACCTATGGAAGTTAT+GGG | 0.391133 | 1.1:+3296525 | MS.gene24375:CDS |
| TGACCCAGCATCATAGTTTG+TGG | 0.401995 | 1.1:-3298719 | None:intergenic |
| AACTAATGAACAAACTGTTC+AGG | 0.404384 | 1.1:+3299038 | MS.gene24375:CDS |
| TTGTTGATGAGTATACTGTT+AGG | 0.408950 | 1.1:+3296565 | MS.gene24375:CDS |
| TTAACCTTCATAAGAAGAAA+TGG | 0.410261 | 1.1:+3298974 | MS.gene24375:CDS |
| CAGTCCATTTCTTCTTATGA+AGG | 0.428123 | 1.1:-3298978 | None:intergenic |
| CAAAGAATGTTTGCGGGTGC+AGG | 0.429014 | 1.1:+3296282 | MS.gene24375:CDS |
| TTCAGGCCAGAGATGGTTGT+AGG | 0.442433 | 1.1:+3297738 | MS.gene24375:intron |
| GTTCAGATGGCCCAAGTTGG+AGG | 0.446964 | 1.1:-3298759 | None:intergenic |
| TTGGTGAATTTAGGTAGGGC+TGG | 0.447981 | 1.1:+3296504 | MS.gene24375:intron |
| GCGACAGACAACCTCCAACT+TGG | 0.454333 | 1.1:+3298748 | MS.gene24375:CDS |
| GCTATGCCTCAGAGTGGTAC+TGG | 0.454847 | 1.1:+3296603 | MS.gene24375:CDS |
| AGACTTCAAAGAATGTTTGC+GGG | 0.454988 | 1.1:+3296276 | MS.gene24375:CDS |
| GGATAGATGGCTTGTTCAGA+TGG | 0.463953 | 1.1:-3298772 | None:intergenic |
| GGCTTTAAATCAACGGGCAG+TGG | 0.464164 | 1.1:+3298628 | MS.gene24375:CDS |
| TAATCCACAAACTATGATGC+TGG | 0.468722 | 1.1:+3298715 | MS.gene24375:CDS |
| GAAAGCCAGCAGCCAAATCC+AGG | 0.481373 | 1.1:-3297777 | None:intergenic |
| AGCATCCTGCCTTCCGACAT+TGG | 0.486252 | 1.1:-3299674 | None:intergenic |
| AACAACAACCATGTCAGGTA+TGG | 0.489135 | 1.1:+3296251 | None:intergenic |
| GGTTGGTATCATTCACATCC+TGG | 0.489485 | 1.1:+3297759 | MS.gene24375:CDS |
| TGTTGATGAGTATACTGTTA+GGG | 0.494455 | 1.1:+3296566 | MS.gene24375:CDS |
| TAGTTTGTGGATTAATCAGC+CGG | 0.499510 | 1.1:-3298706 | None:intergenic |
| CAAGTACAACAAGGCAGTGC+AGG | 0.499844 | 1.1:+3299615 | MS.gene24375:CDS |
| GGACTGATGGTTTGACACTC+AGG | 0.502110 | 1.1:+3298995 | MS.gene24375:CDS |
| TGCTCAGATGAATCTAGGGT+GGG | 0.502945 | 1.1:-3296339 | None:intergenic |
| AGGTAGGGCTGGTGTACCTA+TGG | 0.507375 | 1.1:+3296515 | MS.gene24375:intron |
| GCGGGTGCAGGTGGAGCACT+CGG | 0.510885 | 1.1:+3296294 | MS.gene24375:CDS |
| TACCAACCTACAACCATCTC+TGG | 0.511025 | 1.1:-3297744 | None:intergenic |
| CGACAGACAACCTCCAACTT+GGG | 0.511124 | 1.1:+3298749 | MS.gene24375:CDS |
| TCGATAACAACAACCATGTC+AGG | 0.518171 | 1.1:+3296246 | None:intergenic |
| TGTGGACATTAACACACAAC+AGG | 0.519212 | 1.1:+3297803 | MS.gene24375:CDS |
| AAGTTATGGGTTTGATGTTG+GGG | 0.521290 | 1.1:+3296538 | MS.gene24375:CDS |
| AATTGCCAATGTCGGAAGGC+AGG | 0.531358 | 1.1:+3299669 | MS.gene24375:CDS |
| AGAATGTTTGCGGGTGCAGG+TGG | 0.533259 | 1.1:+3296285 | MS.gene24375:CDS |
| GCTCAGATGAATCTAGGGTG+GGG | 0.536007 | 1.1:-3296338 | None:intergenic |
| AACTTGCTCAGATGAATCTA+GGG | 0.538949 | 1.1:-3296343 | None:intergenic |
| AATAATGTCGGTTCAAGCCA+TGG | 0.548960 | 1.1:-3298900 | None:intergenic |
| TGGCTGCTGGCTTTCCGGTG+TGG | 0.551510 | 1.1:+3297785 | MS.gene24375:CDS |
| AAGACTTCAAAGAATGTTTG+CGG | 0.555255 | 1.1:+3296275 | MS.gene24375:CDS |
| CTTGTTCAGATGGCCCAAGT+TGG | 0.556282 | 1.1:-3298762 | None:intergenic |
| TTTCTGTTTCAGGCCAGAGA+TGG | 0.557983 | 1.1:+3297731 | MS.gene24375:intron |
| GGCCAGAGATGGTTGTAGGT+TGG | 0.558155 | 1.1:+3297742 | MS.gene24375:intron |
| CTCAGATGAATCTAGGGTGG+GGG | 0.560533 | 1.1:-3296337 | None:intergenic |
| CATAAGAAGAAATGGACTGA+TGG | 0.560914 | 1.1:+3298982 | MS.gene24375:CDS |
| AAGTCTTTCCATACCTGACA+TGG | 0.565400 | 1.1:-3296259 | None:intergenic |
| TTGCTATTGAGTAATAATGT+CGG | 0.574217 | 1.1:-3298912 | None:intergenic |
| TCAACGGGCAGTGGCTGTCG+TGG | 0.579907 | 1.1:+3298637 | MS.gene24375:CDS |
| AGTTATGGGTTTGATGTTGG+GGG | 0.584691 | 1.1:+3296539 | MS.gene24375:CDS |
| AATTAGAAACATGCTCCTCA+AGG | 0.585638 | 1.1:-3299705 | None:intergenic |
| AATCCACAAACTATGATGCT+GGG | 0.587299 | 1.1:+3298716 | MS.gene24375:CDS |
| ACGGGCAGTGGCTGTCGTGG+TGG | 0.593252 | 1.1:+3298640 | MS.gene24375:CDS |
| AAACTTGCAATTGCCAATGT+CGG | 0.594399 | 1.1:+3299661 | MS.gene24375:CDS |
| ATATGTTGAAACAAACTGGA+AGG | 0.596652 | 1.1:+3296673 | MS.gene24375:CDS |
| GTACAACAAGGCAGTGCAGG+AGG | 0.596933 | 1.1:+3299618 | MS.gene24375:CDS |
| CTTCTCAAAATGCTCAAACA+TGG | 0.601308 | 1.1:+3296384 | MS.gene24375:CDS |
| AAGTTGGAGGTTGTCTGTCG+CGG | 0.603477 | 1.1:-3298746 | None:intergenic |
| TTGCAATTGCCAATGTCGGA+AGG | 0.605525 | 1.1:+3299665 | MS.gene24375:CDS |
| TTGCTCAGATGAATCTAGGG+TGG | 0.606378 | 1.1:-3296340 | None:intergenic |
| TATTCAGAGTGTTAAAGGCA+AGG | 0.607906 | 1.1:+3298667 | MS.gene24375:CDS |
| ATCAAACCCATAACTTCCAT+AGG | 0.614276 | 1.1:-3296531 | None:intergenic |
| ACTCGGCGGTCATCCACCAC+CGG | 0.646687 | 1.1:+3296311 | MS.gene24375:CDS |
| GGATGCTAAGAAGCACCTTG+AGG | 0.677016 | 1.1:+3299690 | MS.gene24375:CDS |
| GGTGCAGGTGGAGCACTCGG+CGG | 0.713068 | 1.1:+3296297 | MS.gene24375:CDS |
| TTTAGCAACCAAGTACAACA+AGG | 0.716028 | 1.1:+3299606 | MS.gene24375:CDS |
| CTAACACCAGTACCACTCTG+AGG | 0.717528 | 1.1:-3296609 | None:intergenic |
| TCAGAGTGTTAAAGGCAAGG+TGG | 0.720728 | 1.1:+3298670 | MS.gene24375:CDS |
| TTGTGTGTTAATGTCCACAC+CGG | 0.745909 | 1.1:-3297799 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTTTTTCTTTATC+TGG | + | chr1.1:3299142-3299161 | MS.gene24375:intron | 10.0% |
| !! | AAAAATCCCAATAAAAAATT+AGG | - | chr1.1:3296484-3296503 | None:intergenic | 15.0% |
| !! | AAAATCCCAATAAAAAATTA+GGG | - | chr1.1:3296483-3296502 | None:intergenic | 15.0% |
| !! | AAATTAGGGATTAAAAAATT+TGG | - | chr1.1:3296469-3296488 | None:intergenic | 15.0% |
| !! | AATTAGGGATTAAAAAATTT+GGG | - | chr1.1:3296468-3296487 | None:intergenic | 15.0% |
| !! | ATGATATTTATGAAATTTCT+GGG | + | chr1.1:3297918-3297937 | MS.gene24375:intron | 15.0% |
| !! | TATGATATCATATAACAATA+CGG | - | chr1.1:3298138-3298157 | None:intergenic | 15.0% |
| !!! | ACATTTATAAAGCTTTTATA+AGG | + | chr1.1:3297384-3297403 | MS.gene24375:intron | 15.0% |
| !!! | AGTATTTTTATTGCTAAATT+TGG | + | chr1.1:3297963-3297982 | MS.gene24375:intron | 15.0% |
| !!! | ATCTTTTTATTTTACTTGTT+TGG | - | chr1.1:3297900-3297919 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTGGGATTTTTT+TGG | + | chr1.1:3296485-3296504 | MS.gene24375:intron | 15.0% |
| !!! | GTATTTTTATTGCTAAATTT+GGG | + | chr1.1:3297964-3297983 | MS.gene24375:intron | 15.0% |
| !!! | TTAATCCCTAATTTTTTATT+GGG | + | chr1.1:3296475-3296494 | MS.gene24375:intron | 15.0% |
| !!! | TTTAATCCCTAATTTTTTAT+TGG | + | chr1.1:3296474-3296493 | MS.gene24375:intron | 15.0% |
| !!! | TTTCACAAACATTATTTTAT+CGG | + | chr1.1:3299331-3299350 | MS.gene24375:intron | 15.0% |
| !! | AGAAAAGTAAATTTATTTCC+TGG | + | chr1.1:3297993-3298012 | MS.gene24375:intron | 20.0% |
| !! | ATACCATAAGTAAAATGATA+GGG | + | chr1.1:3297088-3297107 | MS.gene24375:intron | 20.0% |
| !! | CAATAATGTGAATGTTATAA+TGG | + | chr1.1:3297233-3297252 | MS.gene24375:intron | 20.0% |
| !! | GATGATATTTATGAAATTTC+TGG | + | chr1.1:3297917-3297936 | MS.gene24375:intron | 20.0% |
| !! | TAAAACGAATTTATGAAACT+TGG | + | chr1.1:3297056-3297075 | MS.gene24375:intron | 20.0% |
| !! | TAAATTTAATTGTTGCTCAT+AGG | - | chr1.1:3299277-3299296 | None:intergenic | 20.0% |
| !! | TATAAAAGTTTAGATGAGTT+TGG | + | chr1.1:3296901-3296920 | MS.gene24375:intron | 20.0% |
| !! | TGATATTTATGAAATTTCTG+GGG | + | chr1.1:3297919-3297938 | MS.gene24375:intron | 20.0% |
| !!! | ATATTTCATTTAAGTTAGAC+AGG | + | chr1.1:3297018-3297037 | MS.gene24375:intron | 20.0% |
| !!! | GAATTTTGCATTTCTTAAAT+GGG | + | chr1.1:3296746-3296765 | MS.gene24375:intron | 20.0% |
| !!! | GATTTTACTAATTTAAGTCA+AGG | - | chr1.1:3299499-3299518 | None:intergenic | 20.0% |
| !!! | TGAATTTTGCATTTCTTAAA+TGG | + | chr1.1:3296745-3296764 | MS.gene24375:intron | 20.0% |
| ! | ACACAAAACAATATAGAACT+AGG | + | chr1.1:3297266-3297285 | MS.gene24375:intron | 25.0% |
| ! | ATTGAAACTAACTGTAAACT+AGG | + | chr1.1:3298475-3298494 | MS.gene24375:intron | 25.0% |
| ! | CACAAAACAATATAGAACTA+GGG | + | chr1.1:3297267-3297286 | MS.gene24375:intron | 25.0% |
| ! | CATACCATAAGTAAAATGAT+AGG | + | chr1.1:3297087-3297106 | MS.gene24375:intron | 25.0% |
| ! | TAAGCAAAAAATTGAGATGT+TGG | + | chr1.1:3297174-3297193 | MS.gene24375:intron | 25.0% |
| ! | TTAACCTTCATAAGAAGAAA+TGG | + | chr1.1:3298974-3298993 | MS.gene24375:CDS | 25.0% |
| ! | TTGAAACTAACTGTAAACTA+GGG | + | chr1.1:3298476-3298495 | MS.gene24375:intron | 25.0% |
| !! | ATATTTATGAAATTTCTGGG+GGG | + | chr1.1:3297921-3297940 | MS.gene24375:intron | 25.0% |
| !! | GATATTTATGAAATTTCTGG+GGG | + | chr1.1:3297920-3297939 | MS.gene24375:intron | 25.0% |
| !! | TAATGAGTTGGATCAAAATA+TGG | - | chr1.1:3298163-3298182 | None:intergenic | 25.0% |
| !! | TTGCTATTGAGTAATAATGT+CGG | - | chr1.1:3298915-3298934 | None:intergenic | 25.0% |
| !!! | AAATTTTAAAGACACTCACT+TGG | - | chr1.1:3298796-3298815 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTGAATTTAGGTA+GGG | + | chr1.1:3296500-3296519 | MS.gene24375:intron | 25.0% |
| !!! | TTTTTTTGGTGAATTTAGGT+AGG | + | chr1.1:3296499-3296518 | MS.gene24375:intron | 25.0% |
| AAACTTAGACTTTCTGTTTC+AGG | + | chr1.1:3297721-3297740 | MS.gene24375:intron | 30.0% | |
| AACTAATGAACAAACTGTTC+AGG | + | chr1.1:3299038-3299057 | MS.gene24375:CDS | 30.0% | |
| AAGACTTCAAAGAATGTTTG+CGG | + | chr1.1:3296275-3296294 | MS.gene24375:CDS | 30.0% | |
| ACATGTAGAGATTAATGAGT+TGG | - | chr1.1:3298175-3298194 | None:intergenic | 30.0% | |
| ACTCAATAGCAATCAATTAC+AGG | + | chr1.1:3298923-3298942 | MS.gene24375:CDS | 30.0% | |
| AGAAGAGAACAGAAAAAAGA+AGG | - | chr1.1:3299109-3299128 | None:intergenic | 30.0% | |
| AGACATTATTCATGATAGAC+AGG | + | chr1.1:3297514-3297533 | MS.gene24375:intron | 30.0% | |
| ATAAGGCAATTAGAGATAAG+TGG | + | chr1.1:3297401-3297420 | MS.gene24375:intron | 30.0% | |
| ATACACGAAAATACAAAGAC+AGG | - | chr1.1:3299381-3299400 | None:intergenic | 30.0% | |
| ATATGTTGAAACAAACTGGA+AGG | + | chr1.1:3296673-3296692 | MS.gene24375:CDS | 30.0% | |
| ATCAAACATTGTTCAGACTT+TGG | + | chr1.1:3299735-3299754 | MS.gene24375:CDS | 30.0% | |
| ATTGCATTGGATAGAAAAGT+TGG | + | chr1.1:3297293-3297312 | MS.gene24375:intron | 30.0% | |
| ATTTAATTGTTGCTCATAGG+TGG | - | chr1.1:3299274-3299293 | None:intergenic | 30.0% | |
| CAGGATATTATCATGTCATT+TGG | + | chr1.1:3297533-3297552 | MS.gene24375:intron | 30.0% | |
| CGTATGAGAAATTGAATGAA+GGG | - | chr1.1:3296445-3296464 | None:intergenic | 30.0% | |
| CTCTACATGTGTATAAGAAT+TGG | + | chr1.1:3298185-3298204 | MS.gene24375:intron | 30.0% | |
| CTTGATATGTTGAAACAAAC+TGG | + | chr1.1:3296669-3296688 | MS.gene24375:CDS | 30.0% | |
| GTTTCAATTACAAATTCTCC+AGG | - | chr1.1:3298463-3298482 | None:intergenic | 30.0% | |
| TAAGGCAATTAGAGATAAGT+GGG | + | chr1.1:3297402-3297421 | MS.gene24375:intron | 30.0% | |
| TAATGGTTTATTCTCGAGAA+TGG | + | chr1.1:3299432-3299451 | MS.gene24375:intron | 30.0% | |
| TACACGAAAATACAAAGACA+GGG | - | chr1.1:3299380-3299399 | None:intergenic | 30.0% | |
| TCAAACATTGTTCAGACTTT+GGG | + | chr1.1:3299736-3299755 | MS.gene24375:CDS | 30.0% | |
| TCAGGTATGTTAAGATTCTT+GGG | + | chr1.1:3299056-3299075 | MS.gene24375:intron | 30.0% | |
| TGAATCAAAATCCCTCTTAA+TGG | - | chr1.1:3297480-3297499 | None:intergenic | 30.0% | |
| TGAATGTTATAATGGTTGTG+TGG | + | chr1.1:3297241-3297260 | MS.gene24375:intron | 30.0% | |
| TTCAGGTATGTTAAGATTCT+TGG | + | chr1.1:3299055-3299074 | MS.gene24375:intron | 30.0% | |
| TTGCATTGGATAGAAAAGTT+GGG | + | chr1.1:3297294-3297313 | MS.gene24375:intron | 30.0% | |
| TTGCTTAAATCCTATGGTTA+TGG | - | chr1.1:3297129-3297148 | None:intergenic | 30.0% | |
| ! | AATCTTGCTTTAGGTGATTT+GGG | + | chr1.1:3297349-3297368 | MS.gene24375:intron | 30.0% |
| ! | ATTTTCGTGTATGATGTTGT+GGG | + | chr1.1:3299389-3299408 | MS.gene24375:intron | 30.0% |
| ! | CTTCCCTATCATTTTACTTA+TGG | - | chr1.1:3297094-3297113 | None:intergenic | 30.0% |
| ! | TATATAGATTATGAAGTGCC+TGG | + | chr1.1:3298442-3298461 | MS.gene24375:intron | 30.0% |
| ! | TATTTTCGTGTATGATGTTG+TGG | + | chr1.1:3299388-3299407 | MS.gene24375:intron | 30.0% |
| ! | TGACTTCAAATTCTCCTTTT+AGG | + | chr1.1:3298870-3298889 | MS.gene24375:intron | 30.0% |
| ! | TGTTGATGAGTATACTGTTA+GGG | + | chr1.1:3296566-3296585 | MS.gene24375:CDS | 30.0% |
| ! | TTATCTATTGCAGAGTTTTG+AGG | + | chr1.1:3298607-3298626 | MS.gene24375:intron | 30.0% |
| ! | TTGTTGATGAGTATACTGTT+AGG | + | chr1.1:3296565-3296584 | MS.gene24375:CDS | 30.0% |
| !!! | GGGATTTTTTTGGTGAATTT+AGG | + | chr1.1:3296495-3296514 | MS.gene24375:intron | 30.0% |
| !!! | GTTTTGAGGCTTTAAATCAA+CGG | + | chr1.1:3298621-3298640 | MS.gene24375:CDS | 30.0% |
| !!! | TTTTGAGGCTTTAAATCAAC+GGG | + | chr1.1:3298622-3298641 | MS.gene24375:CDS | 30.0% |
| AAACTTGCAATTGCCAATGT+CGG | + | chr1.1:3299661-3299680 | MS.gene24375:CDS | 35.0% | |
| AACATCCCAATCTAAGAATG+TGG | - | chr1.1:3298285-3298304 | None:intergenic | 35.0% | |
| AAGTTATGGGTTTGATGTTG+GGG | + | chr1.1:3296538-3296557 | MS.gene24375:CDS | 35.0% | |
| AATCCACAAACTATGATGCT+GGG | + | chr1.1:3298716-3298735 | MS.gene24375:CDS | 35.0% | |
| AATTAGAAACATGCTCCTCA+AGG | - | chr1.1:3299708-3299727 | None:intergenic | 35.0% | |
| ACATCCCAATCTAAGAATGT+GGG | - | chr1.1:3298284-3298303 | None:intergenic | 35.0% | |
| ACGTCCAAATTAGAGATAGA+GGG | + | chr1.1:3297429-3297448 | MS.gene24375:intron | 35.0% | |
| AGAACACTAAAGCATAATCC+AGG | - | chr1.1:3298014-3298033 | None:intergenic | 35.0% | |
| AGACTTCAAAGAATGTTTGC+GGG | + | chr1.1:3296276-3296295 | MS.gene24375:CDS | 35.0% | |
| AGAGATGTAACCATAACCAT+AGG | + | chr1.1:3297116-3297135 | MS.gene24375:intron | 35.0% | |
| AGCAATCTATCATCAACTAC+AGG | - | chr1.1:3299463-3299482 | None:intergenic | 35.0% | |
| AGTTTAGATGAGTTGTGTCT+CGG | + | chr1.1:3296801-3296820 | MS.gene24375:intron | 35.0% | |
| AGTTTAGATGAGTTTGGTCT+CGG | + | chr1.1:3296907-3296926 | MS.gene24375:intron | 35.0% | |
| ATCAAACCCATAACTTCCAT+AGG | - | chr1.1:3296534-3296553 | None:intergenic | 35.0% | |
| ATTACCCCACATTCTTAGAT+TGG | + | chr1.1:3298276-3298295 | MS.gene24375:intron | 35.0% | |
| CAAAATCCCTCTTAATGGTT+TGG | - | chr1.1:3297475-3297494 | None:intergenic | 35.0% | |
| CAGTCCATTTCTTCTTATGA+AGG | - | chr1.1:3298981-3299000 | None:intergenic | 35.0% | |
| CATAAGCTTCATCATGTTGT+AGG | + | chr1.1:3299201-3299220 | MS.gene24375:intron | 35.0% | |
| CTTCTCAAAATGCTCAAACA+TGG | + | chr1.1:3296384-3296403 | MS.gene24375:CDS | 35.0% | |
| GAAGTTATGGGTTTGATGTT+GGG | + | chr1.1:3296537-3296556 | MS.gene24375:CDS | 35.0% | |
| GCGTATGAGAAATTGAATGA+AGG | - | chr1.1:3296446-3296465 | None:intergenic | 35.0% | |
| GTAGACTAGAATCTTGCTTT+AGG | + | chr1.1:3297340-3297359 | MS.gene24375:intron | 35.0% | |
| TAATCCACAAACTATGATGC+TGG | + | chr1.1:3298715-3298734 | MS.gene24375:CDS | 35.0% | |
| TACCACATCTTCATAAGAGA+TGG | - | chr1.1:3297323-3297342 | None:intergenic | 35.0% | |
| TACCATCTCTTATGAAGATG+TGG | + | chr1.1:3297318-3297337 | MS.gene24375:intron | 35.0% | |
| TATAGGCCAAACCATTAAGA+GGG | + | chr1.1:3297466-3297485 | MS.gene24375:intron | 35.0% | |
| TATCATTCACATCCTGGATT+TGG | + | chr1.1:3297765-3297784 | MS.gene24375:CDS | 35.0% | |
| TCAAGTCCAGACATTATTCA+TGG | - | chr1.1:3297680-3297699 | None:intergenic | 35.0% | |
| TCTTGTAGCCAACTTTACTT+GGG | + | chr1.1:3297557-3297576 | MS.gene24375:intron | 35.0% | |
| TGCATTGGATAGAAAAGTTG+GGG | + | chr1.1:3297295-3297314 | MS.gene24375:intron | 35.0% | |
| TTACCCCACATTCTTAGATT+GGG | + | chr1.1:3298277-3298296 | MS.gene24375:intron | 35.0% | |
| TTCTCTCCATGAATAATGTC+TGG | + | chr1.1:3297671-3297690 | MS.gene24375:intron | 35.0% | |
| TTCTTGTAGCCAACTTTACT+TGG | + | chr1.1:3297556-3297575 | MS.gene24375:intron | 35.0% | |
| TTGCCTTTAACACTCTGAAT+AGG | - | chr1.1:3298668-3298687 | None:intergenic | 35.0% | |
| TTTAGCAACCAAGTACAACA+AGG | + | chr1.1:3299606-3299625 | MS.gene24375:CDS | 35.0% | |
| ! | AAACTTGCTCAGATGAATCT+AGG | - | chr1.1:3296347-3296366 | None:intergenic | 35.0% |
| ! | AACTTGCTCAGATGAATCTA+GGG | - | chr1.1:3296346-3296365 | None:intergenic | 35.0% |
| ! | CACAACTTGCTTAAATCCTA+TGG | - | chr1.1:3297135-3297154 | None:intergenic | 35.0% |
| ! | GAATCTTGCTTTAGGTGATT+TGG | + | chr1.1:3297348-3297367 | MS.gene24375:intron | 35.0% |
| ! | GATCCTATTCAGAGTGTTAA+AGG | + | chr1.1:3298662-3298681 | MS.gene24375:CDS | 35.0% |
| ! | TAGTTTGTGGATTAATCAGC+CGG | - | chr1.1:3298709-3298728 | None:intergenic | 35.0% |
| ! | TATTCAGAGTGTTAAAGGCA+AGG | + | chr1.1:3298667-3298686 | MS.gene24375:CDS | 35.0% |
| ! | TCATGATTTTTGCGCAATTC+AGG | + | chr1.1:3299573-3299592 | MS.gene24375:intron | 35.0% |
| ! | TTGGCAATTGCAAGTTTTTC+TGG | - | chr1.1:3299658-3299677 | None:intergenic | 35.0% |
| !! | CATAAGAAGAAATGGACTGA+TGG | + | chr1.1:3298982-3299001 | MS.gene24375:CDS | 35.0% |
| AAACCTTATCCCACTAAGTG+GGG | + | chr1.1:3298089-3298108 | MS.gene24375:intron | 40.0% | |
| AAGACACTCACTTGGATAGA+TGG | - | chr1.1:3298788-3298807 | None:intergenic | 40.0% | |
| ACGCGCTATGTCAAATATCT+AGG | - | chr1.1:3299238-3299257 | None:intergenic | 40.0% | |
| AGAACTAGGGATGATTGCAT+TGG | + | chr1.1:3297280-3297299 | MS.gene24375:intron | 40.0% | |
| AGTTATGGGTTTGATGTTGG+GGG | + | chr1.1:3296539-3296558 | MS.gene24375:CDS | 40.0% | |
| ATAACAGCACTATCCACACA+AGG | - | chr1.1:3298553-3298572 | None:intergenic | 40.0% | |
| ATTGGTGCAAGCACTTGAAT+AGG | + | chr1.1:3298203-3298222 | MS.gene24375:intron | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | + | chr1.1:3298088-3298107 | MS.gene24375:intron | 40.0% | |
| CACACACTCACTGTAATCAA+AGG | + | chr1.1:3299532-3299551 | MS.gene24375:intron | 40.0% | |
| CATCCCAATCTAAGAATGTG+GGG | - | chr1.1:3298283-3298302 | None:intergenic | 40.0% | |
| CCAAATTAGAGATAGAGGGA+GGG | + | chr1.1:3297433-3297452 | MS.gene24375:intron | 40.0% | |
| CTATAGGCCAAACCATTAAG+AGG | + | chr1.1:3297465-3297484 | MS.gene24375:intron | 40.0% | |
| GACGTCCAAATTAGAGATAG+AGG | + | chr1.1:3297428-3297447 | MS.gene24375:intron | 40.0% | |
| GCGGAAAAGAGTTGAAACTT+TGG | + | chr1.1:3297579-3297598 | MS.gene24375:intron | 40.0% | |
| GGAAGTTATGGGTTTGATGT+TGG | + | chr1.1:3296536-3296555 | MS.gene24375:CDS | 40.0% | |
| GGTGTACCTATGGAAGTTAT+GGG | + | chr1.1:3296525-3296544 | MS.gene24375:CDS | 40.0% | |
| TCAAACCTTATCCCACTAAG+TGG | + | chr1.1:3298087-3298106 | MS.gene24375:intron | 40.0% | |
| TCCAAATTAGAGATAGAGGG+AGG | + | chr1.1:3297432-3297451 | MS.gene24375:intron | 40.0% | |
| TGGTGTACCTATGGAAGTTA+TGG | + | chr1.1:3296524-3296543 | MS.gene24375:CDS | 40.0% | |
| TGTGGACATTAACACACAAC+AGG | + | chr1.1:3297803-3297822 | MS.gene24375:CDS | 40.0% | |
| TTGGAGGTTCAATGCTACAA+CGG | - | chr1.1:3298243-3298262 | None:intergenic | 40.0% | |
| TTGTGTGTTAATGTCCACAC+CGG | - | chr1.1:3297802-3297821 | None:intergenic | 40.0% | |
| ! | AATATGATGATGAGCCTTGG+AGG | - | chr1.1:3298259-3298278 | None:intergenic | 40.0% |
| ! | GGTAATATGATGATGAGCCT+TGG | - | chr1.1:3298262-3298281 | None:intergenic | 40.0% |
| ! | TCCTTTTAGGCTCTTATCCA+TGG | + | chr1.1:3298883-3298902 | MS.gene24375:intron | 40.0% |
| ! | TGTGAACGATTTTGCTCACT+TGG | + | chr1.1:3299299-3299318 | MS.gene24375:intron | 40.0% |
| !! | AATAATGTCGGTTCAAGCCA+TGG | - | chr1.1:3298903-3298922 | None:intergenic | 40.0% |
| !! | GAGCATTTTGAGAAGAGCAA+GGG | - | chr1.1:3296379-3296398 | None:intergenic | 40.0% |
| !! | TGAGCATTTTGAGAAGAGCA+AGG | - | chr1.1:3296380-3296399 | None:intergenic | 40.0% |
| AAACCATTAAGCAACCCCTC+AGG | - | chr1.1:3299421-3299440 | None:intergenic | 45.0% | |
| AATTAGAGATAGAGGGAGGG+AGG | + | chr1.1:3297436-3297455 | MS.gene24375:intron | 45.0% | |
| AGCTGGGTGGTATAAACTTG+TGG | + | chr1.1:3298325-3298344 | MS.gene24375:intron | 45.0% | |
| AGGTGGTCATTGATGCTTTC+CGG | + | chr1.1:3298687-3298706 | MS.gene24375:CDS | 45.0% | |
| CCCTCCCTCTATCTCTAATT+TGG | - | chr1.1:3297436-3297455 | None:intergenic | 45.0% | |
| GCCATGGATAAGAGCCTAAA+AGG | - | chr1.1:3298887-3298906 | None:intergenic | 45.0% | |
| GTGAGTGTGTGTCTGTTCAA+TGG | - | chr1.1:3299523-3299542 | None:intergenic | 45.0% | |
| TACCAACCTACAACCATCTC+TGG | - | chr1.1:3297747-3297766 | None:intergenic | 45.0% | |
| TACTAGCAAGCTAGCTAGCT+GGG | + | chr1.1:3298309-3298328 | MS.gene24375:intron | 45.0% | |
| TGACCCAGCATCATAGTTTG+TGG | - | chr1.1:3298722-3298741 | None:intergenic | 45.0% | |
| TGCAAGCACTTGAATAGGAG+AGG | + | chr1.1:3298208-3298227 | MS.gene24375:intron | 45.0% | |
| TGGAGGTTCAATGCTACAAC+GGG | - | chr1.1:3298242-3298261 | None:intergenic | 45.0% | |
| TGTAGCCAACTTTACTTGGG+CGG | + | chr1.1:3297560-3297579 | MS.gene24375:intron | 45.0% | |
| TTAGATGAGTTGTGTCTCGG+AGG | + | chr1.1:3296804-3296823 | MS.gene24375:intron | 45.0% | |
| TTAGATGAGTTTGGTCTCGG+AGG | + | chr1.1:3296910-3296929 | MS.gene24375:intron | 45.0% | |
| TTGCAATTGCCAATGTCGGA+AGG | + | chr1.1:3299665-3299684 | MS.gene24375:CDS | 45.0% | |
| TTGCTCAGATGAATCTAGGG+TGG | - | chr1.1:3296343-3296362 | None:intergenic | 45.0% | |
| TTGGTGAATTTAGGTAGGGC+TGG | + | chr1.1:3296504-3296523 | MS.gene24375:intron | 45.0% | |
| TTTCTGTTTCAGGCCAGAGA+TGG | + | chr1.1:3297731-3297750 | MS.gene24375:intron | 45.0% | |
| ! | CTTTTCCGCCCAAGTAAAGT+TGG | - | chr1.1:3297568-3297587 | None:intergenic | 45.0% |
| ! | GGTTGGTATCATTCACATCC+TGG | + | chr1.1:3297759-3297778 | MS.gene24375:CDS | 45.0% |
| ! | GTTGTAGCATTGAACCTCCA+AGG | + | chr1.1:3298242-3298261 | MS.gene24375:intron | 45.0% |
| ! | TCAGAGTGTTAAAGGCAAGG+TGG | + | chr1.1:3298670-3298689 | MS.gene24375:CDS | 45.0% |
| ! | TGCTCAGATGAATCTAGGGT+GGG | - | chr1.1:3296342-3296361 | None:intergenic | 45.0% |
| !! | ATCCACACAAGGCATTGTCA+TGG | - | chr1.1:3298542-3298561 | None:intergenic | 45.0% |
| !! | GGATAGATGGCTTGTTCAGA+TGG | - | chr1.1:3298775-3298794 | None:intergenic | 45.0% |
| !! | GTTTTTGCTATGCCTCAGAG+TGG | + | chr1.1:3296597-3296616 | MS.gene24375:CDS | 45.0% |
| AAGTTGGAGGTTGTCTGTCG+CGG | - | chr1.1:3298749-3298768 | None:intergenic | 50.0% | |
| AATTGCCAATGTCGGAAGGC+AGG | + | chr1.1:3299669-3299688 | MS.gene24375:CDS | 50.0% | |
| ACTAAGTGGGGTCAGGTACA+TGG | + | chr1.1:3298101-3298120 | MS.gene24375:intron | 50.0% | |
| AGACCTGAGGGGTTGCTTAA+TGG | + | chr1.1:3299415-3299434 | MS.gene24375:intron | 50.0% | |
| AGCCATGACAATGCCTTGTG+TGG | + | chr1.1:3298537-3298556 | MS.gene24375:intron | 50.0% | |
| ATGTACCTGACCCCACTTAG+TGG | - | chr1.1:3298102-3298121 | None:intergenic | 50.0% | |
| ATGTTGTGGGTGTAGACCTG+AGG | + | chr1.1:3299402-3299421 | MS.gene24375:intron | 50.0% | |
| CAAAGAATGTTTGCGGGTGC+AGG | + | chr1.1:3296282-3296301 | MS.gene24375:CDS | 50.0% | |
| CAAGTACAACAAGGCAGTGC+AGG | + | chr1.1:3299615-3299634 | MS.gene24375:CDS | 50.0% | |
| CGACAGACAACCTCCAACTT+GGG | + | chr1.1:3298749-3298768 | MS.gene24375:CDS | 50.0% | |
| CTAACACCAGTACCACTCTG+AGG | - | chr1.1:3296612-3296631 | None:intergenic | 50.0% | |
| CTACTAGCAAGCTAGCTAGC+TGG | + | chr1.1:3298308-3298327 | MS.gene24375:intron | 50.0% | |
| CTTGTTCAGATGGCCCAAGT+TGG | - | chr1.1:3298765-3298784 | None:intergenic | 50.0% | |
| GGACTGATGGTTTGACACTC+AGG | + | chr1.1:3298995-3299014 | MS.gene24375:CDS | 50.0% | |
| GGGAGGGAGGAACTTTCTAT+AGG | + | chr1.1:3297449-3297468 | MS.gene24375:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | - | chr1.1:3298095-3298114 | None:intergenic | 50.0% | |
| TGTACCTGACCCCACTTAGT+GGG | - | chr1.1:3298101-3298120 | None:intergenic | 50.0% | |
| TGTTGTGGGTGTAGACCTGA+GGG | + | chr1.1:3299403-3299422 | MS.gene24375:intron | 50.0% | |
| TTATCCCACTAAGTGGGGTC+AGG | + | chr1.1:3298094-3298113 | MS.gene24375:intron | 50.0% | |
| TTCAGGCCAGAGATGGTTGT+AGG | + | chr1.1:3297738-3297757 | MS.gene24375:intron | 50.0% | |
| ! | CTCAGATGAATCTAGGGTGG+GGG | - | chr1.1:3296340-3296359 | None:intergenic | 50.0% |
| ! | CTGCACTGCCTTGTTGTACT+TGG | - | chr1.1:3299617-3299636 | None:intergenic | 50.0% |
| ! | GCTCAGATGAATCTAGGGTG+GGG | - | chr1.1:3296341-3296360 | None:intergenic | 50.0% |
| !! | GGATGCTAAGAAGCACCTTG+AGG | + | chr1.1:3299690-3299709 | MS.gene24375:CDS | 50.0% |
| !! | GGCTTTAAATCAACGGGCAG+TGG | + | chr1.1:3298628-3298647 | MS.gene24375:CDS | 50.0% |
| ACTGCGCTCTTTGAGCCTCA+AGG | - | chr1.1:3296956-3296975 | None:intergenic | 55.0% | |
| AGAATGTTTGCGGGTGCAGG+TGG | + | chr1.1:3296285-3296304 | MS.gene24375:CDS | 55.0% | |
| AGCATCCTGCCTTCCGACAT+TGG | - | chr1.1:3299677-3299696 | None:intergenic | 55.0% | |
| CACATCCTGGATTTGGCTGC+TGG | + | chr1.1:3297772-3297791 | MS.gene24375:CDS | 55.0% | |
| GAAAGCCAGCAGCCAAATCC+AGG | - | chr1.1:3297780-3297799 | None:intergenic | 55.0% | |
| GCGACAGACAACCTCCAACT+TGG | + | chr1.1:3298748-3298767 | MS.gene24375:CDS | 55.0% | |
| GCTATGCCTCAGAGTGGTAC+TGG | + | chr1.1:3296603-3296622 | MS.gene24375:CDS | 55.0% | |
| GGCCAGAGATGGTTGTAGGT+TGG | + | chr1.1:3297742-3297761 | MS.gene24375:intron | 55.0% | |
| GTACAACAAGGCAGTGCAGG+AGG | + | chr1.1:3299618-3299637 | MS.gene24375:CDS | 55.0% | |
| GTTGTGGGTGTAGACCTGAG+GGG | + | chr1.1:3299404-3299423 | MS.gene24375:intron | 55.0% | |
| TAGCAAGCTAGCTAGCTGGG+TGG | + | chr1.1:3298312-3298331 | MS.gene24375:intron | 55.0% | |
| TCGGAGGCTCACTTGGGTTA+GGG | + | chr1.1:3296926-3296945 | MS.gene24375:intron | 55.0% | |
| TTGGTCTCGGAGGCTCACTT+GGG | + | chr1.1:3296920-3296939 | MS.gene24375:intron | 55.0% | |
| TTTGGTCTCGGAGGCTCACT+TGG | + | chr1.1:3296919-3296938 | MS.gene24375:intron | 55.0% | |
| ! | AGGCTCACTTGGGTTAGGGA+AGG | + | chr1.1:3296930-3296949 | MS.gene24375:intron | 55.0% |
| ! | AGGTAGGGCTGGTGTACCTA+TGG | + | chr1.1:3296515-3296534 | MS.gene24375:intron | 55.0% |
| ! | GAATCTAGGGTGGGGGAATC+CGG | - | chr1.1:3296333-3296352 | None:intergenic | 55.0% |
| ! | GTTCAGATGGCCCAAGTTGG+AGG | - | chr1.1:3298762-3298781 | None:intergenic | 55.0% |
| ! | TTGGGTTAGGGAAGGCCTTG+AGG | + | chr1.1:3296938-3296957 | MS.gene24375:intron | 55.0% |
| !! | GGATTTGGCTGCTGGCTTTC+CGG | + | chr1.1:3297780-3297799 | MS.gene24375:CDS | 55.0% |
| CATGAAGCCTGCCCTGATCC+GGG | - | chr1.1:3296834-3296853 | None:intergenic | 60.0% | |
| CCATGAAGCCTGCCCTGATC+CGG | - | chr1.1:3296835-3296854 | None:intergenic | 60.0% | |
| CTCGGAGGCTCACTTGGGTT+AGG | + | chr1.1:3296925-3296944 | MS.gene24375:intron | 60.0% | |
| TTGTGTCTCGGAGGCTCACC+CGG | + | chr1.1:3296813-3296832 | MS.gene24375:intron | 60.0% | |
| ACTCGGCGGTCATCCACCAC+CGG | + | chr1.1:3296311-3296330 | MS.gene24375:CDS | 65.0% | |
| CCGGATCAGGGCAGGCTTCA+TGG | + | chr1.1:3296832-3296851 | MS.gene24375:intron | 65.0% | |
| TCAACGGGCAGTGGCTGTCG+TGG | + | chr1.1:3298637-3298656 | MS.gene24375:CDS | 65.0% | |
| TCGGAGGCTCACCCGGATCA+GGG | + | chr1.1:3296820-3296839 | MS.gene24375:intron | 65.0% | |
| ! | TCTAGGGTGGGGGAATCCGG+TGG | - | chr1.1:3296330-3296349 | None:intergenic | 65.0% |
| !! | TGGCTGCTGGCTTTCCGGTG+TGG | + | chr1.1:3297785-3297804 | MS.gene24375:CDS | 65.0% |
| ACGGGCAGTGGCTGTCGTGG+TGG | + | chr1.1:3298640-3298659 | MS.gene24375:CDS | 70.0% | |
| AGGCTCACCCGGATCAGGGC+AGG | + | chr1.1:3296824-3296843 | MS.gene24375:intron | 70.0% | |
| AGGGTGGGGGAATCCGGTGG+TGG | - | chr1.1:3296327-3296346 | None:intergenic | 70.0% | |
| CTCGGAGGCTCACCCGGATC+AGG | + | chr1.1:3296819-3296838 | MS.gene24375:intron | 70.0% | |
| ! | GCGGGTGCAGGTGGAGCACT+CGG | + | chr1.1:3296294-3296313 | MS.gene24375:CDS | 70.0% |
| ! | GGTGCAGGTGGAGCACTCGG+CGG | + | chr1.1:3296297-3296316 | MS.gene24375:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 3296261 | 3299786 | 3296261 | ID=MS.gene24375 |
| chr1.1 | mRNA | 3296261 | 3299786 | 3296261 | ID=MS.gene24375.t1;Parent=MS.gene24375 |
| chr1.1 | exon | 3296261 | 3296405 | 3296261 | ID=MS.gene24375.t1.exon1;Parent=MS.gene24375.t1 |
| chr1.1 | CDS | 3296261 | 3296405 | 3296261 | ID=cds.MS.gene24375.t1;Parent=MS.gene24375.t1 |
| chr1.1 | exon | 3296517 | 3296694 | 3296517 | ID=MS.gene24375.t1.exon2;Parent=MS.gene24375.t1 |
| chr1.1 | CDS | 3296517 | 3296694 | 3296517 | ID=cds.MS.gene24375.t1;Parent=MS.gene24375.t1 |
| chr1.1 | exon | 3297743 | 3297824 | 3297743 | ID=MS.gene24375.t1.exon3;Parent=MS.gene24375.t1 |
| chr1.1 | CDS | 3297743 | 3297824 | 3297743 | ID=cds.MS.gene24375.t1;Parent=MS.gene24375.t1 |
| chr1.1 | exon | 3298620 | 3298796 | 3298620 | ID=MS.gene24375.t1.exon4;Parent=MS.gene24375.t1 |
| chr1.1 | CDS | 3298620 | 3298796 | 3298620 | ID=cds.MS.gene24375.t1;Parent=MS.gene24375.t1 |
| chr1.1 | exon | 3298892 | 3299059 | 3298892 | ID=MS.gene24375.t1.exon5;Parent=MS.gene24375.t1 |
| chr1.1 | CDS | 3298892 | 3299059 | 3298892 | ID=cds.MS.gene24375.t1;Parent=MS.gene24375.t1 |
| chr1.1 | exon | 3299595 | 3299786 | 3299595 | ID=MS.gene24375.t1.exon6;Parent=MS.gene24375.t1 |
| chr1.1 | CDS | 3299595 | 3299786 | 3299595 | ID=cds.MS.gene24375.t1;Parent=MS.gene24375.t1 |
| Gene Sequence |
| Protein sequence |
