Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032680.t1 | XP_013450709.1 | 98.6 | 568 | 8 | 0 | 1 | 568 | 1 | 568 | 0.00E+00 | 1120.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032680.t1 | Q9LF46 | 78.9 | 565 | 115 | 2 | 4 | 568 | 12 | 572 | 2.6e-260 | 899.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032680.t1 | A0A072U4V2 | 98.6 | 568 | 8 | 0 | 1 | 568 | 1 | 568 | 0.0e+00 | 1120.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81622 | MS.gene032680 | PPI |
| MS.gene016743 | MS.gene032680 | PPI |
| MS.gene032680 | MS.gene67840 | PPI |
| MS.gene37911 | MS.gene032680 | PPI |
| MS.gene057884 | MS.gene032680 | PPI |
| MS.gene057883 | MS.gene032680 | PPI |
| MS.gene016758 | MS.gene032680 | PPI |
| MS.gene81617 | MS.gene032680 | PPI |
| MS.gene070505 | MS.gene032680 | PPI |
| MS.gene057886 | MS.gene032680 | PPI |
| MS.gene070509 | MS.gene032680 | PPI |
| MS.gene032680 | MS.gene09948 | PPI |
| MS.gene070503 | MS.gene032680 | PPI |
| MS.gene070507 | MS.gene032680 | PPI |
| MS.gene81620 | MS.gene032680 | PPI |
| MS.gene025787 | MS.gene032680 | PPI |
| MS.gene032680 | MS.gene015458 | PPI |
| MS.gene032680 | MS.gene070511 | PPI |
| MS.gene81615 | MS.gene032680 | PPI |
| MS.gene070492 | MS.gene032680 | PPI |
| MS.gene21145 | MS.gene032680 | PPI |
| MS.gene016742 | MS.gene032680 | PPI |
| MS.gene070510 | MS.gene032680 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032680.t1 | MTR_6g004200 | 98.592 | 568 | 8 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1149 |
| MS.gene032680.t1 | MTR_3g099190 | 26.724 | 580 | 356 | 20 | 6 | 553 | 80 | 622 | 3.03e-41 | 158 |
| MS.gene032680.t1 | MTR_2g027220 | 25.564 | 532 | 351 | 14 | 42 | 553 | 100 | 606 | 8.28e-40 | 154 |
| MS.gene032680.t1 | MTR_2g013120 | 25.203 | 492 | 326 | 12 | 6 | 480 | 84 | 550 | 5.38e-37 | 146 |
| MS.gene032680.t1 | MTR_2g015560 | 22.244 | 508 | 313 | 21 | 11 | 482 | 27 | 488 | 9.48e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032680.t1 | AT5G17380 | 79.152 | 566 | 112 | 3 | 4 | 568 | 12 | 572 | 0.0 | 920 |
| MS.gene032680.t1 | AT3G48560 | 26.069 | 491 | 323 | 11 | 6 | 480 | 99 | 565 | 2.74e-39 | 153 |
Find 183 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGATGCTATTTCGGAATT+TGG | 0.168057 | 6.3:+238939 | MS.gene032680:CDS |
| TTGAATTGGCTGCTTCATTT+TGG | 0.184186 | 6.3:+238636 | MS.gene032680:CDS |
| TCGACCTGGTGGTGTTTATT+TGG | 0.219372 | 6.3:+238248 | MS.gene032680:CDS |
| TAGGTTGGATGCTGGTACTT+GGG | 0.254929 | 6.3:+239049 | MS.gene032680:CDS |
| GAGAGGCCGTTGATTGTGTT+TGG | 0.282927 | 6.3:+238429 | MS.gene032680:CDS |
| GTTGCTGTTGAAGGGGATTC+TGG | 0.306147 | 6.3:+239137 | MS.gene032680:CDS |
| CACCGCGACCGACATCGTTT+TGG | 0.308872 | 6.3:-238104 | None:intergenic |
| TGGTGATGCTAAAGAAGTTT+TGG | 0.310510 | 6.3:+238752 | MS.gene032680:CDS |
| GTTGAAGGGGATTCTGGATA+TGG | 0.312883 | 6.3:+239143 | MS.gene032680:CDS |
| TTCAACAATGGTGGTGTATA+TGG | 0.321717 | 6.3:+240700 | MS.gene032680:CDS |
| CGAAACAGCTTCTTGAATCT+TGG | 0.326962 | 6.3:-238391 | None:intergenic |
| TCCGGTCCCGGTTGCGTTCA+CGG | 0.331596 | 6.3:+238015 | MS.gene032680:CDS |
| TGAAGATGAATTGAAGAAAT+TGG | 0.345002 | 6.3:+238476 | MS.gene032680:CDS |
| CGCCTTGTCGTTGCTGTTGA+AGG | 0.349466 | 6.3:+239128 | MS.gene032680:CDS |
| TTCACATCCTTAGACCATTT+CGG | 0.350348 | 6.3:-238666 | None:intergenic |
| GGCGAGACCGTGAACGCAAC+CGG | 0.352550 | 6.3:-238022 | None:intergenic |
| GTGGGAAGGGTTATCTTGTT+GGG | 0.362279 | 6.3:+240830 | MS.gene032680:CDS |
| CTAGGTTGGATGCTGGTACT+TGG | 0.365720 | 6.3:+239048 | MS.gene032680:CDS |
| GGTGGGAAGGGTTATCTTGT+TGG | 0.370731 | 6.3:+240829 | MS.gene032680:CDS |
| GATTATCAGAGATGCTATTT+CGG | 0.371238 | 6.3:+238932 | MS.gene032680:CDS |
| TGCGACGCAATTCGGAATTT+CGG | 0.373872 | 6.3:-238199 | None:intergenic |
| CCGTTTCTTCCGACTCCAAT+GGG | 0.384443 | 6.3:+238516 | MS.gene032680:CDS |
| AGAGGCCGTTGATTGTGTTT+GGG | 0.386929 | 6.3:+238430 | MS.gene032680:CDS |
| GCGGCTAGGTCACTTGCTAT+TGG | 0.400777 | 6.3:+238579 | MS.gene032680:CDS |
| AAGAAATTGGTGGAAAGGAC+GGG | 0.406283 | 6.3:+238489 | MS.gene032680:CDS |
| AGGACCTGTGCGACGCAATT+CGG | 0.407068 | 6.3:-238207 | None:intergenic |
| CACACTATGATGGAAGCTTT+TGG | 0.408547 | 6.3:+240808 | MS.gene032680:CDS |
| GGTTAAAAGCGATTCAGCTT+CGG | 0.413715 | 6.3:-238310 | None:intergenic |
| AGAGCTGACTTTAGTTCATC+AGG | 0.420866 | 6.3:-240856 | None:intergenic |
| GCTTGGGGAGCACTCATCCA+TGG | 0.422593 | 6.3:+238811 | MS.gene032680:CDS |
| ATAGTGTGGTACCCTGCATT+TGG | 0.425828 | 6.3:-240793 | None:intergenic |
| TTCGGAATTTGGAGGAAGTC+CGG | 0.429359 | 6.3:+238950 | MS.gene032680:CDS |
| AGCTGTTTCGCTTCTGAGAA+AGG | 0.431667 | 6.3:+238404 | MS.gene032680:CDS |
| GGAAGAGCCGAAATGGTCTA+AGG | 0.431832 | 6.3:+238659 | MS.gene032680:CDS |
| GTAAGCGGAGGCAGCGTAAC+CGG | 0.431967 | 6.3:-237953 | None:intergenic |
| CGTTGGCTGCCTCCGCGGCT+AGG | 0.435971 | 6.3:+238565 | MS.gene032680:CDS |
| TTCCTCACCGTCTCCGGTCC+CGG | 0.437032 | 6.3:+238003 | MS.gene032680:CDS |
| AATGGGGAAGGGATTGTTGC+CGG | 0.440749 | 6.3:+238533 | MS.gene032680:CDS |
| ACATCCTTTGTTCCAAATGC+AGG | 0.441014 | 6.3:+240781 | MS.gene032680:CDS |
| GCAGCCAACGGATGATCATC+CGG | 0.446211 | 6.3:-238552 | None:intergenic |
| ACCGTGAACGCAACCGGGAC+CGG | 0.448183 | 6.3:-238016 | None:intergenic |
| GGATGTGAAGTTTGTGTTGG+TGG | 0.452229 | 6.3:+238680 | MS.gene032680:CDS |
| GTTTCTCTTCCGCGCTTCTA+CGG | 0.457373 | 6.3:-240729 | None:intergenic |
| GCGTGTAGCGAGTGAAGTTA+CGG | 0.458850 | 6.3:-237881 | None:intergenic |
| CTTGGGGAGCACTCATCCAT+GGG | 0.462647 | 6.3:+238812 | MS.gene032680:CDS |
| CCCATTGGAGTCGGAAGAAA+CGG | 0.463860 | 6.3:-238516 | None:intergenic |
| GCCTTGTCGTTGCTGTTGAA+GGG | 0.464496 | 6.3:+239129 | MS.gene032680:CDS |
| TCCGTTTCTTCCGACTCCAA+TGG | 0.470743 | 6.3:+238515 | MS.gene032680:CDS |
| AGGTTGGATGCTGGTACTTG+GGG | 0.472904 | 6.3:+239050 | MS.gene032680:CDS |
| TGATTGGTGCGAGGTTGAAT+TGG | 0.474694 | 6.3:+238622 | MS.gene032680:CDS |
| GGAACAAAGGATGTCGGAGC+GGG | 0.475357 | 6.3:-240772 | None:intergenic |
| GCTAAATCCTTCTCTCAATT+CGG | 0.476034 | 6.3:+237826 | MS.gene032680:CDS |
| TGGCCTACTGTCATGATCTC+AGG | 0.478594 | 6.3:+238072 | MS.gene032680:CDS |
| ATGGTAACATTTATGACGGC+TGG | 0.480846 | 6.3:-240904 | None:intergenic |
| TTCGGCGTCCAACACATGTT+CGG | 0.481163 | 6.3:+237844 | MS.gene032680:CDS |
| CCGTTGATTGTGTTTGGGAA+AGG | 0.481200 | 6.3:+238435 | MS.gene032680:CDS |
| GGTTACGCTGCCTCCGCTTA+CGG | 0.482147 | 6.3:+237955 | MS.gene032680:CDS |
| CTCGAAATAGCTTCCACCCA+TGG | 0.482342 | 6.3:-238828 | None:intergenic |
| CGTGTAGCGAGTGAAGTTAC+GGG | 0.482755 | 6.3:-237880 | None:intergenic |
| TGTGAAGATGGAGGCTCAAT+TGG | 0.483919 | 6.3:+238869 | MS.gene032680:CDS |
| GGTATCTTCCTCACCGTCTC+CGG | 0.487962 | 6.3:+237997 | MS.gene032680:CDS |
| TTTCCTTTCAGACATTGGTT+CGG | 0.491005 | 6.3:+240650 | MS.gene032680:intron |
| GACAGTAGGCCATGTGTTAG+TGG | 0.494295 | 6.3:-238061 | None:intergenic |
| CCCTATGCCGGTTCTGAGAG+TGG | 0.502759 | 6.3:+240931 | MS.gene032680:CDS |
| AGTGGTGCCGTTGGAGAGAC+CGG | 0.508324 | 6.3:-238043 | None:intergenic |
| GAAGAAATTGGTGGAAAGGA+CGG | 0.510742 | 6.3:+238488 | MS.gene032680:CDS |
| GCTCCTGTGGTGGTTTCTGA+AGG | 0.514501 | 6.3:+238972 | MS.gene032680:CDS |
| CTTCCGACTCCAATGGGGAA+GGG | 0.516974 | 6.3:+238522 | MS.gene032680:CDS |
| TCAGAAACCACCACAGGAGC+CGG | 0.517066 | 6.3:-238969 | None:intergenic |
| GCATCTCTGATAATCCTCAT+TGG | 0.517324 | 6.3:-238924 | None:intergenic |
| ACAGCAACGACAAGGCGATC+AGG | 0.517340 | 6.3:-239122 | None:intergenic |
| TCTCAGAATCTTTCTCTGCT+AGG | 0.519344 | 6.3:+240878 | MS.gene032680:CDS |
| GAAGGACAATGGTGTGAAGA+TGG | 0.519995 | 6.3:+238857 | MS.gene032680:CDS |
| AACGCAACCGGGACCGGAGA+CGG | 0.521595 | 6.3:-238010 | None:intergenic |
| AATTCAATGGGAGAAATTGA+CGG | 0.523138 | 6.3:+237790 | None:intergenic |
| GGCAACAATCCCTTCCCCAT+TGG | 0.524820 | 6.3:-238531 | None:intergenic |
| AACCAAAACGATGTCGGTCG+CGG | 0.525927 | 6.3:+238102 | MS.gene032680:CDS |
| CCAGCATCCAACCTAGTCCT+TGG | 0.526297 | 6.3:-239041 | None:intergenic |
| CCTTGTCGTTGCTGTTGAAG+GGG | 0.527216 | 6.3:+239130 | MS.gene032680:CDS |
| CATCCTCCCACTCTCAGAAC+CGG | 0.529633 | 6.3:-240938 | None:intergenic |
| GTTACCATTGATCCCTATGC+CGG | 0.530592 | 6.3:+240919 | MS.gene032680:CDS |
| CAACACATGTTCGGCGTCGT+CGG | 0.531298 | 6.3:+237853 | MS.gene032680:CDS |
| TGGATATGGATTTAGTGCTA+TGG | 0.537673 | 6.3:+239157 | MS.gene032680:CDS |
| TGGTCTTGGTTATTGTATTG+CGG | 0.538505 | 6.3:+239085 | MS.gene032680:CDS |
| TGTGACGTGGCGATTGTGAT+TGG | 0.538530 | 6.3:+238606 | MS.gene032680:CDS |
| TGTGTTGGTGGATGTGAGCA+AGG | 0.538770 | 6.3:+238692 | MS.gene032680:CDS |
| TCGATCTGTGTTGGTTCAGA+AGG | 0.541457 | 6.3:+239016 | MS.gene032680:CDS |
| CCCACTCTCAGAACCGGCAT+AGG | 0.547084 | 6.3:-240932 | None:intergenic |
| GGCTACCTCACCTCCCGTCC+CGG | 0.551294 | 6.3:+237976 | MS.gene032680:CDS |
| TGGAGGAAGTCCGGCTCCTG+TGG | 0.552079 | 6.3:+238959 | MS.gene032680:CDS |
| GAAACGGATGCCGAGAGAGA+CGG | 0.553705 | 6.3:-237905 | None:intergenic |
| CCACTCTCAGAACCGGCATA+GGG | 0.554364 | 6.3:-240931 | None:intergenic |
| TAAGGATGTGAAGTTTGTGT+TGG | 0.554761 | 6.3:+238677 | MS.gene032680:CDS |
| TGCAGGGTACCACACTATGA+TGG | 0.554969 | 6.3:+240798 | MS.gene032680:CDS |
| AATTGAAGAAATTGGTGGAA+AGG | 0.557407 | 6.3:+238484 | MS.gene032680:CDS |
| GAAGGAGCCAAGGACTAGGT+TGG | 0.558905 | 6.3:+239034 | MS.gene032680:CDS |
| GGTTGCGTTCACGGTCTCGC+CGG | 0.559164 | 6.3:+238024 | MS.gene032680:CDS |
| TTCAGAAGGAGCCAAGGACT+AGG | 0.561809 | 6.3:+239030 | MS.gene032680:CDS |
| AGAACCGGCATAGGGATCAA+TGG | 0.563367 | 6.3:-240923 | None:intergenic |
| AGAAATTGGTGGAAAGGACG+GGG | 0.563983 | 6.3:+238490 | MS.gene032680:CDS |
| AGGAAGTCCGGCTCCTGTGG+TGG | 0.566455 | 6.3:+238962 | MS.gene032680:CDS |
| GGATGTTGGTCGATCTGTGT+TGG | 0.566745 | 6.3:+239007 | MS.gene032680:CDS |
| GCGAGACCGTGAACGCAACC+GGG | 0.568089 | 6.3:-238021 | None:intergenic |
| AGATACCGGGACGGGAGGTG+AGG | 0.568393 | 6.3:-237981 | None:intergenic |
| ATTTAGTGCTATGGAAGTTG+AGG | 0.568805 | 6.3:+239166 | MS.gene032680:CDS |
| CCTATGCCGGTTCTGAGAGT+GGG | 0.571561 | 6.3:+240932 | MS.gene032680:CDS |
| GCTACACGCGCCGTCTCTCT+CGG | 0.574538 | 6.3:+237895 | MS.gene032680:CDS |
| AGATGAATTGAAGAAATTGG+TGG | 0.576890 | 6.3:+238479 | MS.gene032680:CDS |
| GGTTGGATGCTGGTACTTGG+GGG | 0.577192 | 6.3:+239051 | MS.gene032680:CDS |
| TCTTCCGACTCCAATGGGGA+AGG | 0.577825 | 6.3:+238521 | MS.gene032680:CDS |
| CCAAGGACTAGGTTGGATGC+TGG | 0.578727 | 6.3:+239041 | MS.gene032680:CDS |
| TGAGTGCTCCCCAAGCAAAA+CGG | 0.579880 | 6.3:-238804 | None:intergenic |
| GGAGACGGTGAGGAAGATAC+CGG | 0.580493 | 6.3:-237995 | None:intergenic |
| GATGCTATTTCGGAATTTGG+AGG | 0.580533 | 6.3:+238942 | MS.gene032680:CDS |
| AATTCCGAATTGCGTCGCAC+AGG | 0.580568 | 6.3:+238203 | MS.gene032680:CDS |
| GGTGAGGAAGATACCGGGAC+GGG | 0.581947 | 6.3:-237989 | None:intergenic |
| ATCAATGGTAACATTTATGA+CGG | 0.582311 | 6.3:-240908 | None:intergenic |
| GGTGAGGTAGCCGTAAGCGG+AGG | 0.583833 | 6.3:-237965 | None:intergenic |
| AGCTATTTCGAGCAAAGTGA+AGG | 0.585244 | 6.3:+238839 | MS.gene032680:CDS |
| CGACGACGCCGAACATGTGT+TGG | 0.585822 | 6.3:-237852 | None:intergenic |
| CACAGATCGACCAACATCCA+TGG | 0.588090 | 6.3:-239003 | None:intergenic |
| TTGAAAACAATCACCACCAC+AGG | 0.588388 | 6.3:-240682 | None:intergenic |
| CATCCTTTGTTCCAAATGCA+GGG | 0.589443 | 6.3:+240782 | MS.gene032680:CDS |
| AATTCCGTTGCGAATCGACC+TGG | 0.589507 | 6.3:+238234 | MS.gene032680:CDS |
| TTCTGATGCAATACATCAGT+AGG | 0.589507 | 6.3:-238276 | None:intergenic |
| AACCGGCGGATTGTTCGTTG+TGG | 0.592058 | 6.3:-237936 | None:intergenic |
| GAGGAAGATACCGGGACGGG+AGG | 0.593018 | 6.3:-237986 | None:intergenic |
| CTAGCCGCGGAGGCAGCCAA+CGG | 0.593647 | 6.3:-238564 | None:intergenic |
| CCTTTCCCAAACACAATCAA+CGG | 0.595147 | 6.3:-238435 | None:intergenic |
| TTCTGAAGGTGCTAATACCA+TGG | 0.595296 | 6.3:+238986 | MS.gene032680:CDS |
| AATCCCTTCCCCATTGGAGT+CGG | 0.598920 | 6.3:-238525 | None:intergenic |
| CCATGTGTTAGTGGTGCCGT+TGG | 0.601490 | 6.3:-238052 | None:intergenic |
| CCCCTTCAACAGCAACGACA+AGG | 0.603202 | 6.3:-239130 | None:intergenic |
| CGTTGTGGAAAGCGATGAAA+CGG | 0.603488 | 6.3:-237921 | None:intergenic |
| GGAGCGGGGTCCTCCTTGTG+AGG | 0.604623 | 6.3:-240757 | None:intergenic |
| GGAGGTGAGGTAGCCGTAAG+CGG | 0.606197 | 6.3:-237968 | None:intergenic |
| TTGGACGCCGAATTGAGAGA+AGG | 0.613367 | 6.3:-237833 | None:intergenic |
| TTCCACAACGAACAATCCGC+CGG | 0.614198 | 6.3:+237934 | MS.gene032680:CDS |
| AGAGAAACATGGACCTCACA+AGG | 0.617835 | 6.3:+240744 | MS.gene032680:CDS |
| GATGGAGGCTCAATTGGCAA+AGG | 0.622460 | 6.3:+238875 | MS.gene032680:CDS |
| CAATCACCACCACAGGCAGT+TGG | 0.622614 | 6.3:-240675 | None:intergenic |
| AACCGGGACCGGAGACGGTG+AGG | 0.622684 | 6.3:-238005 | None:intergenic |
| TCTTGTAACCAAAACGATGT+CGG | 0.622756 | 6.3:+238096 | MS.gene032680:CDS |
| TGGAACAAAGGATGTCGGAG+CGG | 0.622773 | 6.3:-240773 | None:intergenic |
| TGTTGGTTCAGAAGGAGCCA+AGG | 0.626040 | 6.3:+239024 | MS.gene032680:CDS |
| AGCAAGTGACCTAGCCGCGG+AGG | 0.628473 | 6.3:-238574 | None:intergenic |
| GTTGCCGGATGATCATCCGT+TGG | 0.630066 | 6.3:+238548 | MS.gene032680:CDS |
| GCATTTGGAACAAAGGATGT+CGG | 0.630283 | 6.3:-240778 | None:intergenic |
| ATGCCGGTTCTGAGAGTGGG+AGG | 0.630890 | 6.3:+240935 | MS.gene032680:CDS |
| GGTCTCGCCGGTCTCTCCAA+CGG | 0.631545 | 6.3:+238036 | MS.gene032680:CDS |
| CGCTTCTGAGAAAGGCGGAG+AGG | 0.633700 | 6.3:+238412 | MS.gene032680:CDS |
| ACCACCAGGTCGATTCGCAA+CGG | 0.637403 | 6.3:-238238 | None:intergenic |
| TCCGTTGCGAATCGACCTGG+TGG | 0.638885 | 6.3:+238237 | MS.gene032680:CDS |
| AGCGGAGGCAGCGTAACCGG+CGG | 0.642708 | 6.3:-237950 | None:intergenic |
| GAGACGGTGAGGAAGATACC+GGG | 0.648886 | 6.3:-237994 | None:intergenic |
| AGATCCAAATAAACACCACC+AGG | 0.649375 | 6.3:-238252 | None:intergenic |
| CGGTGAGGAAGATACCGGGA+CGG | 0.650594 | 6.3:-237990 | None:intergenic |
| TCGAGCAAAGTGAAGGACAA+TGG | 0.651334 | 6.3:+238846 | MS.gene032680:CDS |
| GAACCTGAGATCATGACAGT+AGG | 0.653809 | 6.3:-238075 | None:intergenic |
| GATTCGCAACGGAATTAGCA+AGG | 0.654780 | 6.3:-238227 | None:intergenic |
| CCAACGGCACCACTAACACA+TGG | 0.655427 | 6.3:+238052 | MS.gene032680:CDS |
| AGAAGCGCGGAAGAGAAACA+TGG | 0.658183 | 6.3:+240733 | MS.gene032680:CDS |
| GGTGCTAATACCATGGATGT+TGG | 0.661368 | 6.3:+238993 | MS.gene032680:CDS |
| GCGATCAGGATAAGCGACAG+CGG | 0.666530 | 6.3:-239108 | None:intergenic |
| GAACAAAGGATGTCGGAGCG+GGG | 0.667800 | 6.3:-240771 | None:intergenic |
| GCACCTTCAGAAACCACCAC+AGG | 0.667938 | 6.3:-238975 | None:intergenic |
| TCGGTACCAACTGCCTGTGG+TGG | 0.670360 | 6.3:+240669 | MS.gene032680:CDS |
| CAAAAGCTTCCATCATAGTG+TGG | 0.672720 | 6.3:-240807 | None:intergenic |
| TCATCCGTTGGCTGCCTCCG+CGG | 0.676715 | 6.3:+238560 | MS.gene032680:CDS |
| TGGTGGTGACCGTAGAAGCG+CGG | 0.676748 | 6.3:+240720 | MS.gene032680:CDS |
| GGGGAGCACTCATCCATGGG+TGG | 0.677623 | 6.3:+238815 | MS.gene032680:CDS |
| TGTTTCGCTTCTGAGAAAGG+CGG | 0.679005 | 6.3:+238407 | MS.gene032680:CDS |
| GTACCCTGCATTTGGAACAA+AGG | 0.679208 | 6.3:-240785 | None:intergenic |
| TGGCGATTGTGATTGGTGCG+AGG | 0.681842 | 6.3:+238613 | MS.gene032680:CDS |
| GGTTCGGTACCAACTGCCTG+TGG | 0.691668 | 6.3:+240666 | MS.gene032680:CDS |
| AATAGCAAGTGACCTAGCCG+CGG | 0.695771 | 6.3:-238577 | None:intergenic |
| CGTTTCTTCCGACTCCAATG+GGG | 0.702926 | 6.3:+238517 | MS.gene032680:CDS |
| GGACAATGGTGTGAAGATGG+AGG | 0.707741 | 6.3:+238860 | MS.gene032680:CDS |
| AACAATGGTGGTGTATATGG+TGG | 0.712302 | 6.3:+240703 | MS.gene032680:CDS |
| GTGTAGCGAGTGAAGTTACG+GGG | 0.725280 | 6.3:-237879 | None:intergenic |
| GAAACATGGACCTCACAAGG+AGG | 0.726765 | 6.3:+240747 | MS.gene032680:CDS |
| TGCTATTGGAAAATGTGACG+TGG | 0.744033 | 6.3:+238593 | MS.gene032680:CDS |
| GAGAGAAGGATTTAGCAGCG+AGG | 0.776384 | 6.3:-237819 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATTTGAAAAATCT+GGG | - | chr6.3:240006-240025 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAGGTTTTT+TGG | + | chr6.3:239463-239482 | MS.gene032680:intron | 10.0% |
| !!! | TTTTTTTTTTTTCAATTTCA+AGG | - | chr6.3:239452-239471 | None:intergenic | 10.0% |
| !! | GATATAAAATTTGAAAAATC+TGG | - | chr6.3:240007-240026 | None:intergenic | 15.0% |
| !! | TATAAAATTTGAAAAATCTG+GGG | - | chr6.3:240005-240024 | None:intergenic | 15.0% |
| !! | AATGTGATCTTATTCATATA+TGG | + | chr6.3:240556-240575 | MS.gene032680:intron | 20.0% |
| !! | ACCAAAAATTTATGAATGAA+TGG | - | chr6.3:240522-240541 | None:intergenic | 20.0% |
| !! | ATAAAATTTGAAAAATCTGG+GGG | - | chr6.3:240004-240023 | None:intergenic | 20.0% |
| !! | ATTCTTGTATTCATAAAATG+AGG | - | chr6.3:240604-240623 | None:intergenic | 20.0% |
| !! | CCTTGAAATTGAAAAAAAAA+GGG | + | chr6.3:239358-239377 | MS.gene032680:intron | 20.0% |
| !! | CTTGAAATTGAAAAAAAAAG+GGG | + | chr6.3:239359-239378 | MS.gene032680:intron | 20.0% |
| !! | TCCTTGAAATTGAAAAAAAA+AGG | + | chr6.3:239357-239376 | MS.gene032680:intron | 20.0% |
| !! | TTGAAATTGAAAAAAAAAGG+GGG | + | chr6.3:239360-239379 | MS.gene032680:intron | 20.0% |
| !!! | ACATCAGTAATTGATTTAAA+TGG | - | chr6.3:240081-240100 | None:intergenic | 20.0% |
| !!! | ACCATTCATTCATAAATTTT+TGG | + | chr6.3:240518-240537 | MS.gene032680:intron | 20.0% |
| !!! | CTTAACAAGTTTGTTATTTT+GGG | + | chr6.3:239593-239612 | MS.gene032680:intron | 20.0% |
| !!! | CTTGTTAAGAAATTTTGATA+AGG | - | chr6.3:239582-239601 | None:intergenic | 20.0% |
| !!! | TCTTAACAAGTTTGTTATTT+TGG | + | chr6.3:239592-239611 | MS.gene032680:intron | 20.0% |
| ! | AAATTGAACAAAATGCTGTT+TGG | + | chr6.3:240194-240213 | MS.gene032680:intron | 25.0% |
| ! | AAGTAAAGACCTTAATAACA+AGG | - | chr6.3:240364-240383 | None:intergenic | 25.0% |
| ! | ACATACACATATTAGATTTG+TGG | + | chr6.3:239550-239569 | MS.gene032680:intron | 25.0% |
| ! | ATATAACTTCTATAGTCTCA+GGG | - | chr6.3:239631-239650 | None:intergenic | 25.0% |
| ! | ATCAATGGTAACATTTATGA+CGG | - | chr6.3:240911-240930 | None:intergenic | 25.0% |
| ! | ATGTTCTTATGCTTGTAAAA+TGG | + | chr6.3:240452-240471 | MS.gene032680:intron | 25.0% |
| ! | ATTGGCGTCAAAAAATTAAA+CGG | - | chr6.3:238909-238928 | None:intergenic | 25.0% |
| ! | GAAATTGAAAAAAGGTTGTT+TGG | + | chr6.3:239833-239852 | MS.gene032680:intron | 25.0% |
| ! | TATATAACTTCTATAGTCTC+AGG | - | chr6.3:239632-239651 | None:intergenic | 25.0% |
| ! | TATCAAAGATCTTTACTATC+AGG | - | chr6.3:239769-239788 | None:intergenic | 25.0% |
| ! | TGAAATTGAAAAAAAAAGGG+GGG | + | chr6.3:239361-239380 | MS.gene032680:intron | 25.0% |
| ! | TGAAGATGAATTGAAGAAAT+TGG | + | chr6.3:238476-238495 | MS.gene032680:CDS | 25.0% |
| ! | TTGTCCTTGAAATTGAAAAA+AGG | + | chr6.3:239354-239373 | MS.gene032680:intron | 25.0% |
| !!! | ACAACCTTTTTTCAATTTCA+AGG | - | chr6.3:239832-239851 | None:intergenic | 25.0% |
| !!! | AGTTTTGGAGATTTTGAATA+AGG | + | chr6.3:238767-238786 | MS.gene032680:CDS | 25.0% |
| !!! | CCCTTTTTTTTTCAATTTCA+AGG | - | chr6.3:239361-239380 | None:intergenic | 25.0% |
| !!! | TTTTTTTCAATTTCAAGGAC+AGG | - | chr6.3:239356-239375 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTTTCAGACAT+TGG | + | chr6.3:240645-240664 | MS.gene032680:intron | 25.0% |
| AATTGAAGAAATTGGTGGAA+AGG | + | chr6.3:238484-238503 | MS.gene032680:CDS | 30.0% | |
| AGATGAATTGAAGAAATTGG+TGG | + | chr6.3:238479-238498 | MS.gene032680:CDS | 30.0% | |
| ATAAAACTTGCATAGTCTCA+GGG | - | chr6.3:240389-240408 | None:intergenic | 30.0% | |
| ATCAATTACTGATGTTGTGA+AGG | + | chr6.3:240086-240105 | MS.gene032680:intron | 30.0% | |
| CCTGTTAAGAAGTTATCATA+AGG | - | chr6.3:240321-240340 | None:intergenic | 30.0% | |
| CCTTATGATAACTTCTTAAC+AGG | + | chr6.3:240318-240337 | MS.gene032680:intron | 30.0% | |
| GATGATATAGACATAAGTAG+CGG | + | chr6.3:239314-239333 | MS.gene032680:intron | 30.0% | |
| GCTACATCAGAGATTTAAAA+TGG | - | chr6.3:239714-239733 | None:intergenic | 30.0% | |
| TATAAAACTTGCATAGTCTC+AGG | - | chr6.3:240390-240409 | None:intergenic | 30.0% | |
| TCATTTGCAACAAAGAAGTT+GGG | - | chr6.3:239518-239537 | None:intergenic | 30.0% | |
| TGTAACATCCAAATCCAATA+GGG | - | chr6.3:239270-239289 | None:intergenic | 30.0% | |
| TTGTAACATCCAAATCCAAT+AGG | - | chr6.3:239271-239290 | None:intergenic | 30.0% | |
| ! | AGATACATATCTGAGATATG+TGG | + | chr6.3:240289-240308 | MS.gene032680:intron | 30.0% |
| ! | AGATCTTTGATAGTTAGTAG+CGG | + | chr6.3:239777-239796 | MS.gene032680:intron | 30.0% |
| ! | CAGCATTTTGTTCAATTTCA+TGG | - | chr6.3:240192-240211 | None:intergenic | 30.0% |
| ! | GATTATCAGAGATGCTATTT+CGG | + | chr6.3:238932-238951 | MS.gene032680:CDS | 30.0% |
| ! | GATTTTCTCTGCTAGATTTT+TGG | - | chr6.3:238340-238359 | None:intergenic | 30.0% |
| ! | TTGATTGCGAATTTTGTGAA+AGG | - | chr6.3:238165-238184 | None:intergenic | 30.0% |
| !! | AGCTTAGAAAACCGTTTTTA+GGG | + | chr6.3:238724-238743 | MS.gene032680:CDS | 30.0% |
| !! | TCAGTTTAGCCTTGTTATTA+AGG | + | chr6.3:240352-240371 | MS.gene032680:intron | 30.0% |
| !!! | TTAATTTTTTGACGCCAATG+AGG | + | chr6.3:238910-238929 | MS.gene032680:CDS | 30.0% |
| AAAGCAGTATTCTCAGTTTC+AGG | - | chr6.3:240424-240443 | None:intergenic | 35.0% | |
| AATGTGTTTCTCTAGTCTAG+TGG | + | chr6.3:239289-239308 | MS.gene032680:intron | 35.0% | |
| ACTTCTTTGTTGCAAATGAG+TGG | + | chr6.3:239519-239538 | MS.gene032680:intron | 35.0% | |
| ATTCCTGATAGCAAAGATCT+TGG | + | chr6.3:240133-240152 | MS.gene032680:intron | 35.0% | |
| ATTTAGTGCTATGGAAGTTG+AGG | + | chr6.3:239166-239185 | MS.gene032680:CDS | 35.0% | |
| CTCATTTGCAACAAAGAAGT+TGG | - | chr6.3:239519-239538 | None:intergenic | 35.0% | |
| CTTCTTTGTTGCAAATGAGT+GGG | + | chr6.3:239520-239539 | MS.gene032680:intron | 35.0% | |
| GCTAAATCCTTCTCTCAATT+CGG | + | chr6.3:237826-237845 | MS.gene032680:CDS | 35.0% | |
| GGCAAAGACCTAAAATAACA+AGG | - | chr6.3:239976-239995 | None:intergenic | 35.0% | |
| TAAGGATGTGAAGTTTGTGT+TGG | + | chr6.3:238677-238696 | MS.gene032680:CDS | 35.0% | |
| TCACCAACTAACCCTAAAAA+CGG | - | chr6.3:238738-238757 | None:intergenic | 35.0% | |
| TCTGAACGAGTTATTTACTC+TGG | + | chr6.3:239948-239967 | MS.gene032680:intron | 35.0% | |
| TCTTGTAACCAAAACGATGT+CGG | + | chr6.3:238096-238115 | MS.gene032680:CDS | 35.0% | |
| TGAAAAAAAAAGGGGGGATT+TGG | + | chr6.3:239367-239386 | MS.gene032680:intron | 35.0% | |
| TGGATATGGATTTAGTGCTA+TGG | + | chr6.3:239157-239176 | MS.gene032680:CDS | 35.0% | |
| TTAAATCTCTGATGTAGCGA+GGG | + | chr6.3:239716-239735 | MS.gene032680:intron | 35.0% | |
| TTCACATCCTTAGACCATTT+CGG | - | chr6.3:238669-238688 | None:intergenic | 35.0% | |
| TTCTGATGCAATACATCAGT+AGG | - | chr6.3:238279-238298 | None:intergenic | 35.0% | |
| TTGAAAAATCTGGGGGAAAA+AGG | - | chr6.3:239997-240016 | None:intergenic | 35.0% | |
| TTTAAATCTCTGATGTAGCG+AGG | + | chr6.3:239715-239734 | MS.gene032680:intron | 35.0% | |
| ! | AAAGATGATCCGTTTTGCTT+GGG | + | chr6.3:238795-238814 | MS.gene032680:CDS | 35.0% |
| ! | CTAGTTTGCAACATAGAAGT+TGG | - | chr6.3:240255-240274 | None:intergenic | 35.0% |
| ! | CTCGTTCAGAAGTTTTCATA+AGG | - | chr6.3:239938-239957 | None:intergenic | 35.0% |
| ! | GTGATTGTTTTCAACAATGG+TGG | + | chr6.3:240691-240710 | MS.gene032680:CDS | 35.0% |
| ! | GTGGTGATTGTTTTCAACAA+TGG | + | chr6.3:240688-240707 | MS.gene032680:CDS | 35.0% |
| ! | TAAAGATGATCCGTTTTGCT+TGG | + | chr6.3:238794-238813 | MS.gene032680:CDS | 35.0% |
| ! | TATCCAAGATCTTTGCTATC+AGG | - | chr6.3:240139-240158 | None:intergenic | 35.0% |
| ! | TGAATTGGCTGCTTCATTTT+GGG | + | chr6.3:238637-238656 | MS.gene032680:CDS | 35.0% |
| ! | TGGTCTTGGTTATTGTATTG+CGG | + | chr6.3:239085-239104 | MS.gene032680:CDS | 35.0% |
| ! | TTCAACAATGGTGGTGTATA+TGG | + | chr6.3:240700-240719 | MS.gene032680:CDS | 35.0% |
| ! | TTGAATTGGCTGCTTCATTT+TGG | + | chr6.3:238636-238655 | MS.gene032680:CDS | 35.0% |
| ! | TTTCCTTTCAGACATTGGTT+CGG | + | chr6.3:240650-240669 | MS.gene032680:intron | 35.0% |
| ! | TTTCTGCTTAGAACTTTTGC+TGG | + | chr6.3:239739-239758 | MS.gene032680:intron | 35.0% |
| !! | AGAGATGCTATTTCGGAATT+TGG | + | chr6.3:238939-238958 | MS.gene032680:CDS | 35.0% |
| !! | GAGCTTAGAAAACCGTTTTT+AGG | + | chr6.3:238723-238742 | MS.gene032680:CDS | 35.0% |
| !! | TGGTGATGCTAAAGAAGTTT+TGG | + | chr6.3:238752-238771 | MS.gene032680:CDS | 35.0% |
| !!! | AAACCGTTTTTAGGGTTAGT+TGG | + | chr6.3:238732-238751 | MS.gene032680:CDS | 35.0% |
| AAGAAATTGGTGGAAAGGAC+GGG | + | chr6.3:238489-238508 | MS.gene032680:CDS | 40.0% | |
| ACATCCTTTGTTCCAAATGC+AGG | + | chr6.3:240781-240800 | MS.gene032680:CDS | 40.0% | |
| AGATACACATGAGATATGCG+TGG | + | chr6.3:239900-239919 | MS.gene032680:intron | 40.0% | |
| AGATCCAAATAAACACCACC+AGG | - | chr6.3:238255-238274 | None:intergenic | 40.0% | |
| ATGGTAACATTTATGACGGC+TGG | - | chr6.3:240907-240926 | None:intergenic | 40.0% | |
| CAAAAGCTTCCATCATAGTG+TGG | - | chr6.3:240810-240829 | None:intergenic | 40.0% | |
| CATCCTTTGTTCCAAATGCA+GGG | + | chr6.3:240782-240801 | MS.gene032680:CDS | 40.0% | |
| CATGGCTTATTCTCTGTTTC+AGG | - | chr6.3:239666-239685 | None:intergenic | 40.0% | |
| CCTTTCCCAAACACAATCAA+CGG | - | chr6.3:238438-238457 | None:intergenic | 40.0% | |
| CGAAACAGCTTCTTGAATCT+TGG | - | chr6.3:238394-238413 | None:intergenic | 40.0% | |
| CTGAAACAGAGAATAAGCCA+TGG | + | chr6.3:239664-239683 | MS.gene032680:intron | 40.0% | |
| CTTCTATAGTCTCAGGGAAA+AGG | - | chr6.3:239625-239644 | None:intergenic | 40.0% | |
| GAAGAAATTGGTGGAAAGGA+CGG | + | chr6.3:238488-238507 | MS.gene032680:CDS | 40.0% | |
| GCAGTGATGAATCTTAGTAG+TGG | + | chr6.3:239405-239424 | MS.gene032680:intron | 40.0% | |
| GCATCTCTGATAATCCTCAT+TGG | - | chr6.3:238927-238946 | None:intergenic | 40.0% | |
| GGTTAAAAGCGATTCAGCTT+CGG | - | chr6.3:238313-238332 | None:intergenic | 40.0% | |
| GTTGTGATCCCTATTGGATT+TGG | + | chr6.3:239259-239278 | MS.gene032680:intron | 40.0% | |
| TCTCAGAATCTTTCTCTGCT+AGG | + | chr6.3:240878-240897 | MS.gene032680:CDS | 40.0% | |
| TGCTATTGGAAAATGTGACG+TGG | + | chr6.3:238593-238612 | MS.gene032680:CDS | 40.0% | |
| TTGAAAACAATCACCACCAC+AGG | - | chr6.3:240685-240704 | None:intergenic | 40.0% | |
| ! | AACAATGGTGGTGTATATGG+TGG | + | chr6.3:240703-240722 | MS.gene032680:CDS | 40.0% |
| ! | AAGATGATCCGTTTTGCTTG+GGG | + | chr6.3:238796-238815 | MS.gene032680:CDS | 40.0% |
| ! | AGAGCTGACTTTAGTTCATC+AGG | - | chr6.3:240859-240878 | None:intergenic | 40.0% |
| ! | AGCTATTTCGAGCAAAGTGA+AGG | + | chr6.3:238839-238858 | MS.gene032680:CDS | 40.0% |
| ! | GAATTGGCTGCTTCATTTTG+GGG | + | chr6.3:238638-238657 | MS.gene032680:CDS | 40.0% |
| ! | GCATTTGGAACAAAGGATGT+CGG | - | chr6.3:240781-240800 | None:intergenic | 40.0% |
| !! | ACTATGATGGAAGCTTTTGG+TGG | + | chr6.3:240811-240830 | MS.gene032680:CDS | 40.0% |
| !! | CACACTATGATGGAAGCTTT+TGG | + | chr6.3:240808-240827 | MS.gene032680:CDS | 40.0% |
| !! | CTATGATGGAAGCTTTTGGT+GGG | + | chr6.3:240812-240831 | MS.gene032680:CDS | 40.0% |
| !! | GATGCTATTTCGGAATTTGG+AGG | + | chr6.3:238942-238961 | MS.gene032680:CDS | 40.0% |
| !! | TTCTGAAGGTGCTAATACCA+TGG | + | chr6.3:238986-239005 | MS.gene032680:CDS | 40.0% |
| !!! | CTCTGCTAGATTTTTGGCTT+CGG | - | chr6.3:238334-238353 | None:intergenic | 40.0% |
| !!! | CTCTGGAGCCTTGTTATTTT+AGG | + | chr6.3:239965-239984 | MS.gene032680:intron | 40.0% |
| !!! | TTTTTTGCAGCAGCATACCA+TGG | - | chr6.3:239684-239703 | None:intergenic | 40.0% |
| AGAAATTGGTGGAAAGGACG+GGG | + | chr6.3:238490-238509 | MS.gene032680:CDS | 45.0% | |
| AGAGAAACATGGACCTCACA+AGG | + | chr6.3:240744-240763 | MS.gene032680:CDS | 45.0% | |
| ATAGTGTGGTACCCTGCATT+TGG | - | chr6.3:240796-240815 | None:intergenic | 45.0% | |
| CGTTGTGGAAAGCGATGAAA+CGG | - | chr6.3:237924-237943 | None:intergenic | 45.0% | |
| GAACCTGAGATCATGACAGT+AGG | - | chr6.3:238078-238097 | None:intergenic | 45.0% | |
| GAAGGACAATGGTGTGAAGA+TGG | + | chr6.3:238857-238876 | MS.gene032680:CDS | 45.0% | |
| GATTCGCAACGGAATTAGCA+AGG | - | chr6.3:238230-238249 | None:intergenic | 45.0% | |
| GGATGTGAAGTTTGTGTTGG+TGG | + | chr6.3:238680-238699 | MS.gene032680:CDS | 45.0% | |
| GGTGCTAATACCATGGATGT+TGG | + | chr6.3:238993-239012 | MS.gene032680:CDS | 45.0% | |
| GTACCGAACCAATGTCTGAA+AGG | - | chr6.3:240656-240675 | None:intergenic | 45.0% | |
| GTGGGAAGGGTTATCTTGTT+GGG | + | chr6.3:240830-240849 | MS.gene032680:CDS | 45.0% | |
| GTTACCATTGATCCCTATGC+CGG | + | chr6.3:240919-240938 | MS.gene032680:CDS | 45.0% | |
| GTTGAAGGGGATTCTGGATA+TGG | + | chr6.3:239143-239162 | MS.gene032680:CDS | 45.0% | |
| TCGAGCAAAGTGAAGGACAA+TGG | + | chr6.3:238846-238865 | MS.gene032680:CDS | 45.0% | |
| TGATTGGTGCGAGGTTGAAT+TGG | + | chr6.3:238622-238641 | MS.gene032680:CDS | 45.0% | |
| TGCGACGCAATTCGGAATTT+CGG | - | chr6.3:238202-238221 | None:intergenic | 45.0% | |
| TGTGAAGATGGAGGCTCAAT+TGG | + | chr6.3:238869-238888 | MS.gene032680:CDS | 45.0% | |
| TTCGGAATTTGGAGGAAGTC+CGG | + | chr6.3:238950-238969 | MS.gene032680:CDS | 45.0% | |
| TTGTGCGTTGTGATCCCTAT+TGG | + | chr6.3:239253-239272 | MS.gene032680:intron | 45.0% | |
| ! | AGAGGCCGTTGATTGTGTTT+GGG | + | chr6.3:238430-238449 | MS.gene032680:CDS | 45.0% |
| ! | AGCTGTTTCGCTTCTGAGAA+AGG | + | chr6.3:238404-238423 | MS.gene032680:CDS | 45.0% |
| ! | ATGGAAGCTTTTGGTGGGAA+GGG | + | chr6.3:240817-240836 | MS.gene032680:CDS | 45.0% |
| ! | CCGTTGATTGTGTTTGGGAA+AGG | + | chr6.3:238435-238454 | MS.gene032680:CDS | 45.0% |
| ! | GTACCCTGCATTTGGAACAA+AGG | - | chr6.3:240788-240807 | None:intergenic | 45.0% |
| ! | TAGGTTGGATGCTGGTACTT+GGG | + | chr6.3:239049-239068 | MS.gene032680:CDS | 45.0% |
| ! | TCGACCTGGTGGTGTTTATT+TGG | + | chr6.3:238248-238267 | MS.gene032680:CDS | 45.0% |
| ! | TGTTTCGCTTCTGAGAAAGG+CGG | + | chr6.3:238407-238426 | MS.gene032680:CDS | 45.0% |
| !! | ATTTTGGGGAAGAGCCGAAA+TGG | + | chr6.3:238652-238671 | MS.gene032680:CDS | 45.0% |
| !! | TCGATCTGTGTTGGTTCAGA+AGG | + | chr6.3:239016-239035 | MS.gene032680:CDS | 45.0% |
| !! | AATTGAAAAAAAAAAAAAAA+AGG | + | chr6.3:239455-239474 | MS.gene032680:intron | 5.0% |
| AACCAAAACGATGTCGGTCG+CGG | + | chr6.3:238102-238121 | MS.gene032680:CDS | 50.0% | |
| AATAGCAAGTGACCTAGCCG+CGG | - | chr6.3:238580-238599 | None:intergenic | 50.0% | |
| AATCCCTTCCCCATTGGAGT+CGG | - | chr6.3:238528-238547 | None:intergenic | 50.0% | |
| AATGGGGAAGGGATTGTTGC+CGG | + | chr6.3:238533-238552 | MS.gene032680:CDS | 50.0% | |
| AATTCCGAATTGCGTCGCAC+AGG | + | chr6.3:238203-238222 | MS.gene032680:CDS | 50.0% | |
| AATTCCGTTGCGAATCGACC+TGG | + | chr6.3:238234-238253 | MS.gene032680:CDS | 50.0% | |
| AGAACCGGCATAGGGATCAA+TGG | - | chr6.3:240926-240945 | None:intergenic | 50.0% | |
| AGGTTGGATGCTGGTACTTG+GGG | + | chr6.3:239050-239069 | MS.gene032680:CDS | 50.0% | |
| CACAGATCGACCAACATCCA+TGG | - | chr6.3:239006-239025 | None:intergenic | 50.0% | |
| CCCATTGGAGTCGGAAGAAA+CGG | - | chr6.3:238519-238538 | None:intergenic | 50.0% | |
| CCGTTTCTTCCGACTCCAAT+GGG | + | chr6.3:238516-238535 | MS.gene032680:CDS | 50.0% | |
| CGTGTAGCGAGTGAAGTTAC+GGG | - | chr6.3:237883-237902 | None:intergenic | 50.0% | |
| CGTTTCTTCCGACTCCAATG+GGG | + | chr6.3:238517-238536 | MS.gene032680:CDS | 50.0% | |
| CTCGAAATAGCTTCCACCCA+TGG | - | chr6.3:238831-238850 | None:intergenic | 50.0% | |
| GAAACATGGACCTCACAAGG+AGG | + | chr6.3:240747-240766 | MS.gene032680:CDS | 50.0% | |
| GACAGTAGGCCATGTGTTAG+TGG | - | chr6.3:238064-238083 | None:intergenic | 50.0% | |
| GAGAGAAGGATTTAGCAGCG+AGG | - | chr6.3:237822-237841 | None:intergenic | 50.0% | |
| GATGGAGGCTCAATTGGCAA+AGG | + | chr6.3:238875-238894 | MS.gene032680:CDS | 50.0% | |
| GCGTGTAGCGAGTGAAGTTA+CGG | - | chr6.3:237884-237903 | None:intergenic | 50.0% | |
| GGAAGAGCCGAAATGGTCTA+AGG | + | chr6.3:238659-238678 | MS.gene032680:CDS | 50.0% | |
| GGACAATGGTGTGAAGATGG+AGG | + | chr6.3:238860-238879 | MS.gene032680:CDS | 50.0% | |
| GGATGTTGGTCGATCTGTGT+TGG | + | chr6.3:239007-239026 | MS.gene032680:CDS | 50.0% | |
| GGTGGGAAGGGTTATCTTGT+TGG | + | chr6.3:240829-240848 | MS.gene032680:CDS | 50.0% | |
| GTGTAGCGAGTGAAGTTACG+GGG | - | chr6.3:237882-237901 | None:intergenic | 50.0% | |
| GTTTCTCTTCCGCGCTTCTA+CGG | - | chr6.3:240732-240751 | None:intergenic | 50.0% | |
| TCCGTTTCTTCCGACTCCAA+TGG | + | chr6.3:238515-238534 | MS.gene032680:CDS | 50.0% | |
| TGAGTGCTCCCCAAGCAAAA+CGG | - | chr6.3:238807-238826 | None:intergenic | 50.0% | |
| TGGAACAAAGGATGTCGGAG+CGG | - | chr6.3:240776-240795 | None:intergenic | 50.0% | |
| TGGCCTACTGTCATGATCTC+AGG | + | chr6.3:238072-238091 | MS.gene032680:CDS | 50.0% | |
| TGTGACGTGGCGATTGTGAT+TGG | + | chr6.3:238606-238625 | MS.gene032680:CDS | 50.0% | |
| TTCAGAAGGAGCCAAGGACT+AGG | + | chr6.3:239030-239049 | MS.gene032680:CDS | 50.0% | |
| TTCCACAACGAACAATCCGC+CGG | + | chr6.3:237934-237953 | MS.gene032680:CDS | 50.0% | |
| TTCGGCGTCCAACACATGTT+CGG | + | chr6.3:237844-237863 | MS.gene032680:CDS | 50.0% | |
| TTGGACGCCGAATTGAGAGA+AGG | - | chr6.3:237836-237855 | None:intergenic | 50.0% | |
| ! | AGAAGCGCGGAAGAGAAACA+TGG | + | chr6.3:240733-240752 | MS.gene032680:CDS | 50.0% |
| ! | CCTTGTCGTTGCTGTTGAAG+GGG | + | chr6.3:239130-239149 | MS.gene032680:CDS | 50.0% |
| ! | CTAGGTTGGATGCTGGTACT+TGG | + | chr6.3:239048-239067 | MS.gene032680:CDS | 50.0% |
| ! | GAGAGGCCGTTGATTGTGTT+TGG | + | chr6.3:238429-238448 | MS.gene032680:CDS | 50.0% |
| ! | GATGGAAGCTTTTGGTGGGA+AGG | + | chr6.3:240816-240835 | MS.gene032680:CDS | 50.0% |
| ! | GCCTTGTCGTTGCTGTTGAA+GGG | + | chr6.3:239129-239148 | MS.gene032680:CDS | 50.0% |
| ! | GTTGCTGTTGAAGGGGATTC+TGG | + | chr6.3:239137-239156 | MS.gene032680:CDS | 50.0% |
| ! | TGCAGGGTACCACACTATGA+TGG | + | chr6.3:240798-240817 | MS.gene032680:CDS | 50.0% |
| ! | TGTGTTGGTGGATGTGAGCA+AGG | + | chr6.3:238692-238711 | MS.gene032680:CDS | 50.0% |
| !! | TGTTGGTTCAGAAGGAGCCA+AGG | + | chr6.3:239024-239043 | MS.gene032680:CDS | 50.0% |
| ACAGCAACGACAAGGCGATC+AGG | - | chr6.3:239125-239144 | None:intergenic | 55.0% | |
| AGGACCTGTGCGACGCAATT+CGG | - | chr6.3:238210-238229 | None:intergenic | 55.0% | |
| AGGGGGGATTTGGCATGCAT+TGG | + | chr6.3:239377-239396 | MS.gene032680:intron | 55.0% | |
| CAACACATGTTCGGCGTCGT+CGG | + | chr6.3:237853-237872 | MS.gene032680:CDS | 55.0% | |
| CAATCACCACCACAGGCAGT+TGG | - | chr6.3:240678-240697 | None:intergenic | 55.0% | |
| CATCCTCCCACTCTCAGAAC+CGG | - | chr6.3:240941-240960 | None:intergenic | 55.0% | |
| CCAACGGCACCACTAACACA+TGG | + | chr6.3:238052-238071 | MS.gene032680:CDS | 55.0% | |
| CCACTCTCAGAACCGGCATA+GGG | - | chr6.3:240934-240953 | None:intergenic | 55.0% | |
| CCAGCATCCAACCTAGTCCT+TGG | - | chr6.3:239044-239063 | None:intergenic | 55.0% | |
| CCCCTTCAACAGCAACGACA+AGG | - | chr6.3:239133-239152 | None:intergenic | 55.0% | |
| CTGGTACTTGGGGGACTATG+GGG | + | chr6.3:239060-239079 | MS.gene032680:CDS | 55.0% | |
| CTTCCGACTCCAATGGGGAA+GGG | + | chr6.3:238522-238541 | MS.gene032680:CDS | 55.0% | |
| GAAACGGATGCCGAGAGAGA+CGG | - | chr6.3:237908-237927 | None:intergenic | 55.0% | |
| GAACAAAGGATGTCGGAGCG+GGG | - | chr6.3:240774-240793 | None:intergenic | 55.0% | |
| GAAGGAGCCAAGGACTAGGT+TGG | + | chr6.3:239034-239053 | MS.gene032680:CDS | 55.0% | |
| GAGACGGTGAGGAAGATACC+GGG | - | chr6.3:237997-238016 | None:intergenic | 55.0% | |
| GCACCTTCAGAAACCACCAC+AGG | - | chr6.3:238978-238997 | None:intergenic | 55.0% | |
| GCAGCCAACGGATGATCATC+CGG | - | chr6.3:238555-238574 | None:intergenic | 55.0% | |
| GCGATCAGGATAAGCGACAG+CGG | - | chr6.3:239111-239130 | None:intergenic | 55.0% | |
| GCTCCTGTGGTGGTTTCTGA+AGG | + | chr6.3:238972-238991 | MS.gene032680:CDS | 55.0% | |
| GCTGGTACTTGGGGGACTAT+GGG | + | chr6.3:239059-239078 | MS.gene032680:CDS | 55.0% | |
| GGAACAAAGGATGTCGGAGC+GGG | - | chr6.3:240775-240794 | None:intergenic | 55.0% | |
| GGAGACGGTGAGGAAGATAC+CGG | - | chr6.3:237998-238017 | None:intergenic | 55.0% | |
| GGCAACAATCCCTTCCCCAT+TGG | - | chr6.3:238534-238553 | None:intergenic | 55.0% | |
| GGTATCTTCCTCACCGTCTC+CGG | + | chr6.3:237997-238016 | MS.gene032680:CDS | 55.0% | |
| GGTTGGATGCTGGTACTTGG+GGG | + | chr6.3:239051-239070 | MS.gene032680:CDS | 55.0% | |
| GTTGCCGGATGATCATCCGT+TGG | + | chr6.3:238548-238567 | MS.gene032680:CDS | 55.0% | |
| TCAGAAACCACCACAGGAGC+CGG | - | chr6.3:238972-238991 | None:intergenic | 55.0% | |
| TCTTCCGACTCCAATGGGGA+AGG | + | chr6.3:238521-238540 | MS.gene032680:CDS | 55.0% | |
| TGCTGGTACTTGGGGGACTA+TGG | + | chr6.3:239058-239077 | MS.gene032680:CDS | 55.0% | |
| TGGCATGCACTGAGCAGTGA+TGG | + | chr6.3:239483-239502 | MS.gene032680:intron | 55.0% | |
| TGGCGATTGTGATTGGTGCG+AGG | + | chr6.3:238613-238632 | MS.gene032680:CDS | 55.0% | |
| TGGTACTTGGGGGACTATGG+GGG | + | chr6.3:239061-239080 | MS.gene032680:CDS | 55.0% | |
| ! | CCAAGGACTAGGTTGGATGC+TGG | + | chr6.3:239041-239060 | MS.gene032680:CDS | 55.0% |
| ! | CGCCTTGTCGTTGCTGTTGA+AGG | + | chr6.3:239128-239147 | MS.gene032680:CDS | 55.0% |
| !! | AACCGGCGGATTGTTCGTTG+TGG | - | chr6.3:237939-237958 | None:intergenic | 55.0% |
| !! | ACCACCAGGTCGATTCGCAA+CGG | - | chr6.3:238241-238260 | None:intergenic | 55.0% |
| !! | CCATGTGTTAGTGGTGCCGT+TGG | - | chr6.3:238055-238074 | None:intergenic | 55.0% |
| !! | CCTATGCCGGTTCTGAGAGT+GGG | + | chr6.3:240932-240951 | MS.gene032680:CDS | 55.0% |
| !! | CTTGGGGAGCACTCATCCAT+GGG | + | chr6.3:238812-238831 | MS.gene032680:CDS | 55.0% |
| !! | GCGGCTAGGTCACTTGCTAT+TGG | + | chr6.3:238579-238598 | MS.gene032680:CDS | 55.0% |
| ACTTGGGGGACTATGGGGGT+TGG | + | chr6.3:239065-239084 | MS.gene032680:CDS | 60.0% | |
| CCCACTCTCAGAACCGGCAT+AGG | - | chr6.3:240935-240954 | None:intergenic | 60.0% | |
| CGACGACGCCGAACATGTGT+TGG | - | chr6.3:237855-237874 | None:intergenic | 60.0% | |
| CGGTGAGGAAGATACCGGGA+CGG | - | chr6.3:237993-238012 | None:intergenic | 60.0% | |
| GGAGGTGAGGTAGCCGTAAG+CGG | - | chr6.3:237971-237990 | None:intergenic | 60.0% | |
| GGTGAGGAAGATACCGGGAC+GGG | - | chr6.3:237992-238011 | None:intergenic | 60.0% | |
| GGTTACGCTGCCTCCGCTTA+CGG | + | chr6.3:237955-237974 | MS.gene032680:CDS | 60.0% | |
| GTAAGCGGAGGCAGCGTAAC+CGG | - | chr6.3:237956-237975 | None:intergenic | 60.0% | |
| TCCGTTGCGAATCGACCTGG+TGG | + | chr6.3:238237-238256 | MS.gene032680:CDS | 60.0% | |
| TCGGTACCAACTGCCTGTGG+TGG | + | chr6.3:240669-240688 | MS.gene032680:CDS | 60.0% | |
| ! | CACCGCGACCGACATCGTTT+TGG | - | chr6.3:238107-238126 | None:intergenic | 60.0% |
| ! | CGCTTCTGAGAAAGGCGGAG+AGG | + | chr6.3:238412-238431 | MS.gene032680:CDS | 60.0% |
| ! | GGTTCGGTACCAACTGCCTG+TGG | + | chr6.3:240666-240685 | MS.gene032680:CDS | 60.0% |
| ! | TGGTGGTGACCGTAGAAGCG+CGG | + | chr6.3:240720-240739 | MS.gene032680:CDS | 60.0% |
| !! | AGTGGTGCCGTTGGAGAGAC+CGG | - | chr6.3:238046-238065 | None:intergenic | 60.0% |
| !! | ATGCCGGTTCTGAGAGTGGG+AGG | + | chr6.3:240935-240954 | MS.gene032680:CDS | 60.0% |
| !! | CCCTATGCCGGTTCTGAGAG+TGG | + | chr6.3:240931-240950 | MS.gene032680:CDS | 60.0% |
| !! | GCTTGGGGAGCACTCATCCA+TGG | + | chr6.3:238811-238830 | MS.gene032680:CDS | 60.0% |
| !! | GGGACTATGGGGGTTGGTCT+TGG | + | chr6.3:239071-239090 | MS.gene032680:CDS | 60.0% |
| AACGCAACCGGGACCGGAGA+CGG | - | chr6.3:238013-238032 | None:intergenic | 65.0% | |
| ACCGTGAACGCAACCGGGAC+CGG | - | chr6.3:238019-238038 | None:intergenic | 65.0% | |
| AGATACCGGGACGGGAGGTG+AGG | - | chr6.3:237984-238003 | None:intergenic | 65.0% | |
| AGCAAGTGACCTAGCCGCGG+AGG | - | chr6.3:238577-238596 | None:intergenic | 65.0% | |
| AGGAAGTCCGGCTCCTGTGG+TGG | + | chr6.3:238962-238981 | MS.gene032680:CDS | 65.0% | |
| GAGGAAGATACCGGGACGGG+AGG | - | chr6.3:237989-238008 | None:intergenic | 65.0% | |
| GCGAGACCGTGAACGCAACC+GGG | - | chr6.3:238024-238043 | None:intergenic | 65.0% | |
| GCTACACGCGCCGTCTCTCT+CGG | + | chr6.3:237895-237914 | MS.gene032680:CDS | 65.0% | |
| GGCGAGACCGTGAACGCAAC+CGG | - | chr6.3:238025-238044 | None:intergenic | 65.0% | |
| GGTCTCGCCGGTCTCTCCAA+CGG | + | chr6.3:238036-238055 | MS.gene032680:CDS | 65.0% | |
| GGTGAGGTAGCCGTAAGCGG+AGG | - | chr6.3:237968-237987 | None:intergenic | 65.0% | |
| GGTTGCGTTCACGGTCTCGC+CGG | + | chr6.3:238024-238043 | MS.gene032680:CDS | 65.0% | |
| TCCGGTCCCGGTTGCGTTCA+CGG | + | chr6.3:238015-238034 | MS.gene032680:CDS | 65.0% | |
| TGGAGGAAGTCCGGCTCCTG+TGG | + | chr6.3:238959-238978 | MS.gene032680:CDS | 65.0% | |
| TTCCTCACCGTCTCCGGTCC+CGG | + | chr6.3:238003-238022 | MS.gene032680:CDS | 65.0% | |
| ! | TCATCCGTTGGCTGCCTCCG+CGG | + | chr6.3:238560-238579 | MS.gene032680:CDS | 65.0% |
| !! | GGGGAGCACTCATCCATGGG+TGG | + | chr6.3:238815-238834 | MS.gene032680:CDS | 65.0% |
| AACCGGGACCGGAGACGGTG+AGG | - | chr6.3:238008-238027 | None:intergenic | 70.0% | |
| AGCGGAGGCAGCGTAACCGG+CGG | - | chr6.3:237953-237972 | None:intergenic | 70.0% | |
| CTAGCCGCGGAGGCAGCCAA+CGG | - | chr6.3:238567-238586 | None:intergenic | 70.0% | |
| GGAGCGGGGTCCTCCTTGTG+AGG | - | chr6.3:240760-240779 | None:intergenic | 70.0% | |
| GGCTACCTCACCTCCCGTCC+CGG | + | chr6.3:237976-237995 | MS.gene032680:CDS | 70.0% | |
| ! | CGTTGGCTGCCTCCGCGGCT+AGG | + | chr6.3:238565-238584 | MS.gene032680:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 237796 | 240975 | 237796 | ID=MS.gene032680 |
| chr6.3 | mRNA | 237796 | 240975 | 237796 | ID=MS.gene032680.t1;Parent=MS.gene032680 |
| chr6.3 | exon | 237796 | 239187 | 237796 | ID=MS.gene032680.t1.exon1;Parent=MS.gene032680.t1 |
| chr6.3 | CDS | 237796 | 239187 | 237796 | ID=cds.MS.gene032680.t1;Parent=MS.gene032680.t1 |
| chr6.3 | exon | 240661 | 240975 | 240661 | ID=MS.gene032680.t1.exon2;Parent=MS.gene032680.t1 |
| chr6.3 | CDS | 240661 | 240975 | 240661 | ID=cds.MS.gene032680.t1;Parent=MS.gene032680.t1 |
| Gene Sequence |
| Protein sequence |
