AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21145

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21145.t1 MTR_5g012030 97.938 582 11 1 1 582 1 581 0.0 1177
MS.gene21145.t1 MTR_5g012050 71.429 105 29 1 241 345 3 106 9.61e-41 150
MS.gene21145.t1 MTR_3g452710 31.651 218 119 6 2 199 11 218 1.41e-19 92.4
MS.gene21145.t1 MTR_3g452710 32.759 116 78 0 393 508 11 126 5.40e-13 72.0
MS.gene21145.t1 MTR_1g041435 36.441 118 75 0 397 514 15 132 5.23e-19 89.0
MS.gene21145.t1 MTR_1g041435 35.354 99 64 0 6 104 15 113 1.46e-13 72.4
MS.gene21145.t1 MTR_3g452710 38.462 130 79 1 2 130 11 140 7.47e-18 87.4
MS.gene21145.t1 MTR_3g452710 32.759 116 78 0 393 508 11 126 5.30e-13 72.0
MS.gene21145.t1 MTR_7g115280 39.655 116 70 0 2 117 335 450 8.82e-17 83.6
MS.gene21145.t1 MTR_7g115280 34.211 114 75 0 393 506 335 448 1.63e-16 82.8
MS.gene21145.t1 MTR_5g009930 35.294 119 77 0 1 119 1 119 1.02e-16 81.6
MS.gene21145.t1 MTR_5g009930 28.205 117 84 0 392 508 1 117 3.11e-11 65.1
MS.gene21145.t1 MTR_1g030300 36.937 111 69 1 1 110 180 290 2.33e-16 82.4
MS.gene21145.t1 MTR_1g030300 31.092 119 81 1 385 502 173 291 3.38e-12 69.3
MS.gene21145.t1 MTR_5g009930 35.294 119 77 0 1 119 1 119 2.92e-16 81.3
MS.gene21145.t1 MTR_5g009930 28.205 117 84 0 392 508 1 117 3.40e-11 65.5
MS.gene21145.t1 MTR_6g053290 39.583 96 58 0 1 96 1 96 1.06e-13 73.2
MS.gene21145.t1 MTR_6g053290 26.144 153 110 2 392 543 1 151 5.16e-11 65.1
MS.gene21145.t1 MTR_6g053290 39.583 96 58 0 1 96 1 96 1.31e-13 73.2
MS.gene21145.t1 MTR_6g053290 26.144 153 110 2 392 543 1 151 7.17e-11 64.7
MS.gene21145.t1 MTR_2g078020 30.476 105 73 0 397 501 466 570 6.18e-13 72.0
MS.gene21145.t1 MTR_2g078020 30.476 105 73 0 397 501 466 570 6.37e-13 72.0
MS.gene21145.t1 MTR_7g059150 32.110 109 67 1 2 103 95 203 2.26e-12 68.2
MS.gene21145.t1 MTR_7g059150 27.536 138 85 2 372 502 82 211 6.65e-11 63.5
MS.gene21145.t1 MTR_4g094205 37.374 99 62 0 397 495 492 590 3.37e-12 69.7
MS.gene21145.t1 MTR_8g107280 29.630 135 89 1 367 495 447 581 1.40e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21145.t1 AT1G62740 73.639 588 132 4 1 582 1 571 0.0 882
MS.gene21145.t1 AT4G12400 72.213 583 136 4 1 582 1 558 0.0 882
MS.gene21145.t1 AT1G12270 73.424 587 136 6 1 582 1 572 0.0 848
MS.gene21145.t1 AT4G12400 71.481 547 130 4 1 546 1 522 0.0 819
MS.gene21145.t1 AT4G12400 32.258 186 125 1 392 576 1 186 5.23e-22 100
MS.gene21145.t1 AT1G04190 40.816 98 58 0 6 103 19 116 7.92e-18 85.5
MS.gene21145.t1 AT1G04190 39.623 106 64 0 397 502 19 124 1.34e-17 84.7
MS.gene21145.t1 AT4G08320 31.361 169 112 3 1 168 174 339 4.72e-17 84.3
MS.gene21145.t1 AT4G08320 33.094 139 86 3 372 508 158 291 8.11e-14 74.3
MS.gene21145.t1 AT4G08320 37.069 116 72 1 1 115 174 289 9.85e-17 83.2
MS.gene21145.t1 AT4G08320 33.094 139 86 3 372 508 158 291 7.32e-14 74.3
MS.gene21145.t1 AT3G04710 40.000 110 66 0 8 117 558 667 6.27e-16 81.6
MS.gene21145.t1 AT3G04710 30.841 107 74 0 399 505 558 664 2.50e-13 73.6
MS.gene21145.t1 AT3G04710 40.000 110 66 0 8 117 334 443 7.08e-16 80.9
MS.gene21145.t1 AT3G04710 30.841 107 74 0 399 505 334 440 1.51e-13 73.6
MS.gene21145.t1 AT3G04710 40.000 110 66 0 8 117 333 442 7.24e-16 80.9
MS.gene21145.t1 AT3G04710 30.841 107 74 0 399 505 333 439 1.47e-13 73.6
MS.gene21145.t1 AT2G42810 26.636 214 135 4 2 199 13 220 2.25e-15 79.3
MS.gene21145.t1 AT2G42810 31.429 140 96 0 389 528 9 148 6.97e-15 77.8
MS.gene21145.t1 AT2G42810 26.636 214 135 4 2 199 13 220 2.25e-15 79.3
MS.gene21145.t1 AT2G42810 31.429 140 96 0 389 528 9 148 6.97e-15 77.8
MS.gene21145.t1 AT2G42810 26.636 214 135 4 2 199 13 220 2.25e-15 79.3
MS.gene21145.t1 AT2G42810 31.429 140 96 0 389 528 9 148 6.97e-15 77.8
MS.gene21145.t1 AT4G11260 36.449 107 68 0 1 107 1 107 5.99e-15 77.0
MS.gene21145.t1 AT2G42810 31.429 140 96 0 389 528 9 148 7.19e-15 78.2
MS.gene21145.t1 AT2G42810 33.621 116 77 0 2 117 13 128 1.00e-14 77.4
MS.gene21145.t1 AT2G42810 31.429 140 96 0 389 528 9 148 7.34e-15 78.2
MS.gene21145.t1 AT2G42810 33.621 116 77 0 2 117 13 128 1.09e-14 77.4
MS.gene21145.t1 AT4G22670 36.893 103 65 0 2 104 123 225 8.77e-13 71.2
MS.gene21145.t1 AT3G17970 35.922 103 66 0 393 495 474 576 3.23e-12 69.7
MS.gene21145.t1 AT1G53300 28.829 111 79 0 391 501 463 573 6.78e-12 68.9
MS.gene21145.t1 AT1G78120 29.600 125 87 1 400 523 166 290 6.62e-11 65.5
MS.gene21145.t1 AT1G78120 29.600 125 87 1 400 523 166 290 7.26e-11 65.5
MS.gene21145.t1 AT4G23570 27.473 182 118 5 25 202 25 196 7.43e-11 64.3
MS.gene21145.t1 AT4G23570 27.473 182 118 5 25 202 25 196 7.43e-11 64.3
MS.gene21145.t1 AT3G58620 26.923 156 97 3 349 502 418 558 7.85e-11 65.5

Find 170 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCATCAGCCAAATT+TGG 0.136072 5.1:+5424301 None:intergenic
CAAATACAAATTCAAATTAT+TGG 0.139538 5.1:+5426798 None:intergenic
GATTTCAAGGGTTCATTATT+AGG 0.169330 5.1:+5427012 None:intergenic
CAGCTTCATTGAGTTTCTTC+AGG 0.191835 5.1:+5424365 None:intergenic
AGAATACTTCGATCCAAATT+TGG 0.199740 5.1:-5424314 MS.gene21145:CDS
TTGAGTTTCTTCAGGGTGTC+TGG 0.227086 5.1:+5424373 None:intergenic
TTGTTGTTCTAGTTCTTTCT+TGG 0.227451 5.1:+5424336 None:intergenic
CAGAGAGTTATGCAAGCTTT+TGG 0.262229 5.1:-5426769 MS.gene21145:CDS
TCCATCAAATTTACTTCATC+TGG 0.263023 5.1:+5423241 None:intergenic
TTCCGGCACTGATCAGCTTT+TGG 0.271295 5.1:+5423268 None:intergenic
AAATACAAATTCAAATTATT+GGG 0.271371 5.1:+5426799 None:intergenic
GTCCATCACACCCGGGTTCT+TGG 0.290667 5.1:+5423296 None:intergenic
CATCATGTTTCAACCCTTCC+TGG 0.293057 5.1:+5423798 None:intergenic
GCAGGTATTGGTTGATTTCC+AGG 0.298727 5.1:-5423346 MS.gene21145:intron
AGCTGCATGTTACACAAAAC+TGG 0.310459 5.1:-5423951 MS.gene21145:CDS
TCCTCCATTGGCTCCGGTTC+CGG 0.312001 5.1:+5426619 None:intergenic
TCCGAACTGGACGGCATATC+AGG 0.312824 5.1:+5426697 None:intergenic
AAGCAAACCTGTCTCATAAC+AGG 0.314328 5.1:+5423444 None:intergenic
GGCAATGCCTGAAGGTTTAA+AGG 0.321704 5.1:-5423927 MS.gene21145:CDS
GCTGATGAGGAGAGAGAAAA+AGG 0.335378 5.1:-5424292 MS.gene21145:intron
TTAAAGCGTCAGTGTAATTC+TGG 0.337616 5.1:+5427166 None:intergenic
AAAACTGAACCGCACCCTTC+CGG 0.339040 5.1:+5423855 None:intergenic
GTATGTTCCTGTGCAGCCTT+TGG 0.339809 5.1:+5423318 None:intergenic
TCTGCATCCTTTAAACCTTC+AGG 0.340625 5.1:+5423920 None:intergenic
TGTCTCTCCTTCAACTCTTC+AGG 0.344507 5.1:+5423600 None:intergenic
AATAATGAACCCTTGAAATC+AGG 0.348019 5.1:-5427009 MS.gene21145:CDS
TGCATCATCTTCACAAAATC+AGG 0.348278 5.1:+5426838 None:intergenic
AAACTGAACCGCACCCTTCC+GGG 0.362337 5.1:+5423856 None:intergenic
GAACCCCTTCAAGCAATTCC+TGG 0.364967 5.1:+5423768 None:intergenic
TTATTCGAAAGCTTTGGAAT+TGG 0.368370 5.1:-5426485 MS.gene21145:CDS
TTACTTCATCTGGACAATTC+CGG 0.371932 5.1:+5423251 None:intergenic
TAATTTGAATTTGTATTTGA+AGG 0.375764 5.1:-5426794 MS.gene21145:CDS
TAACCGTGCTGCTGTATACT+TGG 0.383148 5.1:-5426437 MS.gene21145:CDS
CTGTAACCCTTTGACCAATC+AGG 0.384513 5.1:+5427114 None:intergenic
CGTCTCGGTGCCGCTCATCT+TGG 0.384527 5.1:-5427090 MS.gene21145:CDS
ATTGGCTCCGGTTCCGGCTC+AGG 0.388295 5.1:+5426625 None:intergenic
GGAGAATGCAGCGTTGCCTT+TGG 0.390754 5.1:+5427293 None:intergenic
TCTGCATTATTCGAAAGCTT+TGG 0.393752 5.1:-5426491 MS.gene21145:CDS
TCCGCCTGCTTTGCCACCTC+AGG 0.396836 5.1:+5426655 None:intergenic
GTCTCATAACAGGGTCTTGA+AGG 0.401205 5.1:+5423454 None:intergenic
TTCTAGGCCACGTTCTGCGC+CGG 0.406464 5.1:-5426950 MS.gene21145:CDS
TGAAGGATGTTCTGAATCTC+TGG 0.407523 5.1:+5423471 None:intergenic
TCTTCAGGGTGTCTGGGTTA+CGG 0.408287 5.1:+5424380 None:intergenic
CAGCGGATCGGTTGGAATAC+AGG 0.412654 5.1:+5427202 None:intergenic
TGAAGATAAACCCTAGTTGT+AGG 0.413840 5.1:+5426865 None:intergenic
GTGTAATGCTTAATAGCTTC+AGG 0.414719 5.1:+5424105 None:intergenic
GCGCCGGGTGCCAATCCGTT+TGG 0.416911 5.1:-5426934 MS.gene21145:CDS
TCTAGGCCACGTTCTGCGCC+GGG 0.422100 5.1:-5426949 MS.gene21145:CDS
GAAAGAATATGAAAAGGCTT+TGG 0.427879 5.1:-5423828 MS.gene21145:CDS
ATCGGCTAAACCTGATTTCA+AGG 0.428004 5.1:+5426999 None:intergenic
AGCTTCATTGAGTTTCTTCA+GGG 0.428316 5.1:+5424366 None:intergenic
GCTGTTTCAGCTTACAAGAA+AGG 0.435873 5.1:-5427048 MS.gene21145:CDS
TGCTGCTGTATACTTGGAAA+TGG 0.437857 5.1:-5426431 MS.gene21145:CDS
TGAACCTGAGGTGGCAAAGC+AGG 0.443025 5.1:-5426659 MS.gene21145:CDS
CTCAAACCTGATTGGTCAAA+GGG 0.450036 5.1:-5427120 MS.gene21145:CDS
TGAAGAGTTGAAGGAGAGAC+AGG 0.450058 5.1:-5423598 MS.gene21145:intron
TGAGTTTCTTCAGGGTGTCT+GGG 0.451649 5.1:+5424374 None:intergenic
GGTTGAGCCTGAGCCGGAAC+CGG 0.452769 5.1:-5426632 MS.gene21145:CDS
CTGTTTCAGCTTACAAGAAA+GGG 0.455044 5.1:-5427047 MS.gene21145:CDS
GGAGGTGGCTGATGAGGAGA+AGG 0.455482 5.1:-5426599 MS.gene21145:CDS
TCATCAGCCACCTCCTCCAT+TGG 0.457433 5.1:+5426607 None:intergenic
TGGATCTTGTCCATCACACC+CGG 0.459995 5.1:+5423288 None:intergenic
GAGGAAGGCTGAGGCGCAGA+AGG 0.460304 5.1:-5426566 MS.gene21145:CDS
GGCTTTAGCTTCGTCGGCCA+TGG 0.464637 5.1:+5427314 None:intergenic
TCAAGACCCTGTTATGAGAC+AGG 0.467657 5.1:-5423451 MS.gene21145:intron
CTTAATGTTAAGATTGGAAG+AGG 0.468931 5.1:-5426739 MS.gene21145:CDS
AGCTCTCTTCCTCTCCGAAC+TGG 0.469541 5.1:+5426684 None:intergenic
GCCTGATATGCCGTCCAGTT+CGG 0.472399 5.1:-5426698 MS.gene21145:CDS
AGGAACTGCCATGGGTAAAA+CGG 0.477231 5.1:-5424464 MS.gene21145:CDS
CGATCCAAATTTGGCTGATG+AGG 0.478253 5.1:-5424305 MS.gene21145:CDS
TGTAACTCCTGAAGAGTTGA+AGG 0.487207 5.1:-5423607 MS.gene21145:CDS
TTTCATGAAAGAATATGAAA+AGG 0.488950 5.1:-5423834 MS.gene21145:CDS
TACTGCTGATCCTACAACTA+GGG 0.494571 5.1:-5426875 MS.gene21145:CDS
GGAAAATCCAAAGGCTGCAC+AGG 0.497888 5.1:-5423325 MS.gene21145:CDS
GCGCAGAAGGAGAAGGAGGC+TGG 0.498289 5.1:-5426553 MS.gene21145:CDS
ACCCTTCCGGGTATAACCCT+TGG 0.502655 5.1:+5423868 None:intergenic
GCCACCTCCTCCATTGGCTC+CGG 0.504102 5.1:+5426613 None:intergenic
TGAGCCGGAACCGGAGCCAA+TGG 0.504535 5.1:-5426623 MS.gene21145:CDS
ATCCAAAAGCTGATCAGTGC+CGG 0.507708 5.1:-5423270 MS.gene21145:CDS
TATAACCCTTGGTGAAGGTC+GGG 0.507749 5.1:+5423879 None:intergenic
ACCGGAGCCAATGGAGGAGG+TGG 0.508880 5.1:-5426614 MS.gene21145:CDS
AACAACCAGGAATTGCTTGA+AGG 0.509120 5.1:-5423773 MS.gene21145:CDS
GCCTTTGGCTTTAGCTTCGT+CGG 0.510652 5.1:+5427308 None:intergenic
GTAAGTTTCGCCCACATCTC+CGG 0.511152 5.1:+5426895 None:intergenic
GGCGGAGGTTGAGCCTGAGC+CGG 0.511864 5.1:-5426638 MS.gene21145:CDS
AGGAGAAGGAAGTGAAGCAG+AGG 0.515007 5.1:-5426585 MS.gene21145:CDS
GATGATGCAAGATATTCAAA+AGG 0.517290 5.1:-5426824 MS.gene21145:CDS
AGGAGTTACATCCCCACGAC+TGG 0.518165 5.1:+5423620 None:intergenic
TACCAAGAACCCGGGTGTGA+TGG 0.520879 5.1:-5423298 MS.gene21145:CDS
AGCGTGAGCAGCGGATCGGT+TGG 0.522057 5.1:+5427194 None:intergenic
GTTGGAATACAGGACGTGAT+TGG 0.525153 5.1:+5427212 None:intergenic
GAATACAGGACGTGATTGGT+GGG 0.529765 5.1:+5427216 None:intergenic
GTATAACCCTTGGTGAAGGT+CGG 0.529921 5.1:+5423878 None:intergenic
TTGCATAAAAGATTGTGATA+AGG 0.530466 5.1:-5424551 MS.gene21145:CDS
ATACAGGACGTGATTGGTGG+GGG 0.535184 5.1:+5427218 None:intergenic
GCAAGAGCTTTGACAAGGAA+AGG 0.536678 5.1:-5424484 MS.gene21145:CDS
AATGGAGGAGGTGGCTGATG+AGG 0.538534 5.1:-5426605 MS.gene21145:CDS
AGCAGCACGGTTAGTGAGGA+AGG 0.539890 5.1:+5426447 None:intergenic
TGAGGTGGCAAAGCAGGCGG+AGG 0.540052 5.1:-5426653 MS.gene21145:CDS
CCGTCGAACTCAAACCTGAT+TGG 0.540548 5.1:-5427128 MS.gene21145:CDS
AAAAGCATCACCAAACGGAT+TGG 0.541023 5.1:+5426924 None:intergenic
GGGTTATACCCGGAAGGGTG+CGG 0.542682 5.1:-5423864 MS.gene21145:CDS
CCAATCAGGTTTGAGTTCGA+CGG 0.546460 5.1:+5427128 None:intergenic
GGCTGAGGCGCAGAAGGAGA+AGG 0.547847 5.1:-5426560 MS.gene21145:CDS
ACAACCAGGAATTGCTTGAA+GGG 0.548142 5.1:-5423772 MS.gene21145:CDS
GAAACTCAATGAAGCTGAGA+AGG 0.551120 5.1:-5424359 MS.gene21145:CDS
GCTGCTGTATACTTGGAAAT+GGG 0.551340 5.1:-5426430 MS.gene21145:CDS
GGCAACGCTGCATTCTCCTC+CGG 0.551432 5.1:-5427288 MS.gene21145:CDS
GGAACCGGAGCCAATGGAGG+AGG 0.554085 5.1:-5426617 MS.gene21145:CDS
GGAATACAGGACGTGATTGG+TGG 0.554167 5.1:+5427215 None:intergenic
AGCTTTGGAATTGGATGATG+AGG 0.555608 5.1:-5426476 MS.gene21145:CDS
GAAGAGAGCTGCTGAACCTG+AGG 0.556646 5.1:-5426671 MS.gene21145:CDS
AAATTAATAGAACCAGTCGT+GGG 0.560810 5.1:-5423632 MS.gene21145:CDS
ACTCAAACCTGATTGGTCAA+AGG 0.563775 5.1:-5427121 MS.gene21145:CDS
TCAAAGGGTTACAGCCGTCT+CGG 0.565098 5.1:-5427105 MS.gene21145:CDS
TGGAAGAGGTGGTGATGATG+TGG 0.569802 5.1:-5426725 MS.gene21145:CDS
TGTGATAAGGCTGTTGAAAG+AGG 0.569985 5.1:-5424538 MS.gene21145:CDS
TAATGCTGCGTATAAGAAGA+AGG 0.570012 5.1:-5426530 MS.gene21145:CDS
TCACCAAACGGATTGGCACC+CGG 0.570986 5.1:+5426931 None:intergenic
CAAGATGAGCGGCACCGAGA+CGG 0.571843 5.1:+5427091 None:intergenic
TGTATACTTGGAAATGGGAA+AGG 0.572009 5.1:-5426425 MS.gene21145:intron
TTGGCACCCGGCGCAGAACG+TGG 0.574389 5.1:+5426943 None:intergenic
CACCAAGGGTTATACCCGGA+AGG 0.575257 5.1:-5423870 MS.gene21145:CDS
CTTTGGAAACATACCAGGAA+GGG 0.575984 5.1:-5423811 MS.gene21145:CDS
AATTGCTTGAAGGGGTTCGA+AGG 0.576444 5.1:-5423763 MS.gene21145:intron
GCTGCATGTTACACAAAACT+GGG 0.580641 5.1:-5423950 MS.gene21145:CDS
ACCTGAGGTGGCAAAGCAGG+CGG 0.581309 5.1:-5426656 MS.gene21145:CDS
CCGGGTATAACCCTTGGTGA+AGG 0.581722 5.1:+5423874 None:intergenic
GAAGGAAGTGAAGCAGAGGA+AGG 0.582452 5.1:-5426581 MS.gene21145:CDS
AGTGAAGCAGAGGAAGGCTG+AGG 0.583668 5.1:-5426575 MS.gene21145:CDS
TGAGGCGCAGAAGGAGAAGG+AGG 0.586945 5.1:-5426557 MS.gene21145:CDS
ATACAGCAGCACGGTTAGTG+AGG 0.589306 5.1:+5426443 None:intergenic
GAGAGCTGCTGAACCTGAGG+TGG 0.589705 5.1:-5426668 MS.gene21145:CDS
CAAATTAATAGAACCAGTCG+TGG 0.592861 5.1:-5423633 MS.gene21145:CDS
AATACAGGACGTGATTGGTG+GGG 0.593162 5.1:+5427217 None:intergenic
ACAAGGAAAGGAACTGCCAT+GGG 0.594542 5.1:-5424472 MS.gene21145:CDS
GACAAGGAAAGGAACTGCCA+TGG 0.596247 5.1:-5424473 MS.gene21145:CDS
GCCGGAACCGGAGCCAATGG+AGG 0.596557 5.1:-5426620 MS.gene21145:CDS
TTACTGCTGATCCTACAACT+AGG 0.598575 5.1:-5426876 MS.gene21145:CDS
AAAGGCTTTGGAAACATACC+AGG 0.604647 5.1:-5423816 MS.gene21145:CDS
ACCAAGGGTTATACCCGGAA+GGG 0.604794 5.1:-5423869 MS.gene21145:CDS
AATGTTAAGATTGGAAGAGG+TGG 0.604956 5.1:-5426736 MS.gene21145:CDS
TCGGCTAAACCTGATTTCAA+GGG 0.605511 5.1:+5427000 None:intergenic
GAGAAGCGTGAGCAGCGGAT+CGG 0.606528 5.1:+5427190 None:intergenic
GATGGCGGTTGCGAAATCGC+CGG 0.612453 5.1:+5427269 None:intergenic
CAACCAGGAATTGCTTGAAG+GGG 0.617312 5.1:-5423771 MS.gene21145:CDS
TGATTTCCAGGAAAATCCAA+AGG 0.618569 5.1:-5423334 MS.gene21145:CDS
GCTTTGGAAACATACCAGGA+AGG 0.619719 5.1:-5423812 MS.gene21145:CDS
ACAGGAACATACCAAGAACC+CGG 0.627654 5.1:-5423307 MS.gene21145:CDS
CTTGACCCGACCTTCACCAA+GGG 0.628031 5.1:-5423884 MS.gene21145:CDS
GCCGACGAAGCTAAAGCCAA+AGG 0.634082 5.1:-5427309 MS.gene21145:CDS
CTCTTCCTCTCCGAACTGGA+CGG 0.634577 5.1:+5426688 None:intergenic
GGCGGTTGCGAAATCGCCGG+AGG 0.634986 5.1:+5427272 None:intergenic
CCTTCACCAAGGGTTATACC+CGG 0.641665 5.1:-5423874 MS.gene21145:CDS
TGATGGCATCTGAGAAGTGA+CGG 0.645347 5.1:+5427247 None:intergenic
GGATCTTGTCCATCACACCC+GGG 0.653989 5.1:+5423289 None:intergenic
AGCAAACCTGTCTCATAACA+GGG 0.656878 5.1:+5423445 None:intergenic
GAAACATGATGCAAACAACC+AGG 0.657221 5.1:-5423786 MS.gene21145:CDS
GCTTGACCCGACCTTCACCA+AGG 0.659770 5.1:-5423885 MS.gene21145:CDS
AATTAATAGAACCAGTCGTG+GGG 0.662286 5.1:-5423631 MS.gene21145:CDS
ATCTGAGAAGTGACGGATGG+CGG 0.664337 5.1:+5427254 None:intergenic
CTGGAGAGAAGCGTGAGCAG+CGG 0.667719 5.1:+5427185 None:intergenic
GGCATCTGAGAAGTGACGGA+TGG 0.670607 5.1:+5427251 None:intergenic
TGATAGCAAGAGCTTTGACA+AGG 0.676277 5.1:-5424489 MS.gene21145:CDS
CAGGAACATACCAAGAACCC+GGG 0.680404 5.1:-5423306 MS.gene21145:CDS
TTTCCAAGTATACAGCAGCA+CGG 0.692729 5.1:+5426434 None:intergenic
CTGCATGTTACACAAAACTG+GGG 0.696032 5.1:-5423949 MS.gene21145:CDS
TTGAGAAAGACCAAGATGAG+CGG 0.707072 5.1:+5427080 None:intergenic
TGCATGTTACACAAAACTGG+GGG 0.723034 5.1:-5423948 MS.gene21145:CDS
ATATGCCGTCCAGTTCGGAG+AGG 0.733223 5.1:-5426693 MS.gene21145:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAATTCAAATTATT+GGG + chr5.1:5423767-5423786 None:intergenic 10.0%
!! TATTATTATGATATATGTAT+TGG - chr5.1:5424842-5424861 MS.gene21145:intron 10.0%
!! TTTGTCAAAAATATATAAAT+AGG + chr5.1:5424174-5424193 None:intergenic 10.0%
!! AAGTCTAATAAAGAAAATAA+TGG + chr5.1:5425277-5425296 None:intergenic 15.0%
!! CAAATACAAATTCAAATTAT+TGG + chr5.1:5423768-5423787 None:intergenic 15.0%
!! TAATTTGAATTTGTATTTGA+AGG - chr5.1:5423769-5423788 MS.gene21145:CDS 15.0%
!! TCATAAATATCTAATACTAT+TGG + chr5.1:5425668-5425687 None:intergenic 15.0%
!! TTTAATTGGAAATAGTTAAA+AGG + chr5.1:5424496-5424515 None:intergenic 15.0%
!! TAAATATCTAATACTATTGG+AGG + chr5.1:5425665-5425684 None:intergenic 20.0%
!! TAATAATACTCTTTGAATTC+AGG - chr5.1:5426516-5426535 MS.gene21145:CDS 20.0%
!! TAGATAAATTCTTCAACATT+TGG + chr5.1:5424894-5424913 None:intergenic 20.0%
!! TGGATAAAAGAAGTAAAAAA+GGG - chr5.1:5425096-5425115 MS.gene21145:intron 20.0%
!! TTGGATAAAAGAAGTAAAAA+AGG - chr5.1:5425095-5425114 MS.gene21145:intron 20.0%
!! TTTCATGAAAGAATATGAAA+AGG - chr5.1:5426729-5426748 MS.gene21145:CDS 20.0%
!!! AACAAAGTAATGTATTTTCA+TGG + chr5.1:5424594-5424613 None:intergenic 20.0%
!!! ACATTACTTTGTTTTTTATG+TGG - chr5.1:5424601-5424620 MS.gene21145:intron 20.0%
!!! ATAGGATACAAATTTTACTA+TGG - chr5.1:5425859-5425878 MS.gene21145:intron 20.0%
!!! ATTAAACATACTTTTGTTTG+TGG - chr5.1:5424732-5424751 MS.gene21145:intron 20.0%
!!! ATTATTACCTTAGGATTTTT+CGG + chr5.1:5426503-5426522 None:intergenic 20.0%
!!! CATTACTTTGTTTTTTATGT+GGG - chr5.1:5424602-5424621 MS.gene21145:intron 20.0%
!!! CTGTATTTTGAATATTTTTC+AGG - chr5.1:5427052-5427071 MS.gene21145:CDS 20.0%
!!! GTTTTTTAATGTTAAGTCAA+GGG - chr5.1:5425952-5425971 MS.gene21145:intron 20.0%
!!! TTAAACATACTTTTGTTTGT+GGG - chr5.1:5424733-5424752 MS.gene21145:intron 20.0%
! AAACAATAATGTGGAAATAG+AGG + chr5.1:5426356-5426375 None:intergenic 25.0%
! AATATTATTGGGGTTGTTAA+AGG + chr5.1:5425557-5425576 None:intergenic 25.0%
! ACTTGCTTAGTTATAGTATA+TGG - chr5.1:5424324-5424343 MS.gene21145:CDS 25.0%
! AGATTCAAGGAATATTGAAT+TGG + chr5.1:5425978-5425997 None:intergenic 25.0%
! AGCAGTCTTGAAAATATTAT+TGG + chr5.1:5425569-5425588 None:intergenic 25.0%
! ATAAATTCTTCAACATTTGG+AGG + chr5.1:5424891-5424910 None:intergenic 25.0%
! ATAGGAAGAGAAAAATCTAA+GGG - chr5.1:5425930-5425949 MS.gene21145:intron 25.0%
! ATATTATTGGGGTTGTTAAA+GGG + chr5.1:5425556-5425575 None:intergenic 25.0%
! ATTGAGTCAAAACAATAATG+TGG + chr5.1:5426365-5426384 None:intergenic 25.0%
! CAGTCTTGAAAATATTATTG+GGG + chr5.1:5425567-5425586 None:intergenic 25.0%
! CCTATAAACTCCTAATTAAA+GGG + chr5.1:5425055-5425074 None:intergenic 25.0%
! GAAATATTAAACACATTGCA+GGG + chr5.1:5426848-5426867 None:intergenic 25.0%
! GCAATAAGATGTGTTTATAA+TGG - chr5.1:5427182-5427201 MS.gene21145:CDS 25.0%
! GCAGTCTTGAAAATATTATT+GGG + chr5.1:5425568-5425587 None:intergenic 25.0%
! TAAGATGTGTTTATAATGGT+TGG - chr5.1:5427186-5427205 MS.gene21145:CDS 25.0%
! TATGGTTTGAGTGTTTAAAT+AGG - chr5.1:5425811-5425830 MS.gene21145:intron 25.0%
! TCCTATAAACTCCTAATTAA+AGG + chr5.1:5425056-5425075 None:intergenic 25.0%
! TCTTAGAAATTCTTTAATCG+TGG - chr5.1:5425504-5425523 MS.gene21145:intron 25.0%
! TTGAGTGTTTAAATAGGATT+AGG - chr5.1:5425817-5425836 MS.gene21145:intron 25.0%
! TTGAGTGTTTAAATAGGATT+GGG - chr5.1:5425817-5425836 MS.gene21145:intron 25.0%
! TTGCATAAAAGATTGTGATA+AGG - chr5.1:5426012-5426031 MS.gene21145:intron 25.0%
! TTTGAGTGTTTAAATAGGAT+TGG - chr5.1:5425816-5425835 MS.gene21145:intron 25.0%
!! AGTCTTGTAAATGAATGTTT+GGG - chr5.1:5424794-5424813 MS.gene21145:intron 25.0%
!! GAACTTGTCAAATTTTACTA+TGG - chr5.1:5425793-5425812 MS.gene21145:intron 25.0%
!! GTTTTGCTTAATGTTAAGAT+TGG - chr5.1:5423818-5423837 MS.gene21145:CDS 25.0%
!! TCAGAGTATTATGCATATAA+CGG + chr5.1:5425619-5425638 None:intergenic 25.0%
!! TTATTACCTTAGGATTTTTC+GGG + chr5.1:5426502-5426521 None:intergenic 25.0%
!! TTGATAGTACATCAATTCAA+TGG + chr5.1:5424534-5424553 None:intergenic 25.0%
!!! AACTGTTTTTTTATGAAAGC+TGG - chr5.1:5424688-5424707 MS.gene21145:intron 25.0%
!!! ATATTTCCAGTTTCCTTTTT+TGG - chr5.1:5426861-5426880 MS.gene21145:CDS 25.0%
!!! ATGTAACACTTTTTCAAGTA+TGG + chr5.1:5424398-5424417 None:intergenic 25.0%
!!! GGTTTTTTAATGTTAAGTCA+AGG - chr5.1:5425951-5425970 MS.gene21145:intron 25.0%
!!! TCAAAGAGTATTATTACCTT+AGG + chr5.1:5426512-5426531 None:intergenic 25.0%
!!! TGTAACACTTTTTCAAGTAT+GGG + chr5.1:5424397-5424416 None:intergenic 25.0%
!!! TTTGAATATTTTTCAGGCTA+AGG - chr5.1:5427058-5427077 MS.gene21145:CDS 25.0%
!!! TTTTTCTGGGAGAATATTAA+GGG + chr5.1:5425342-5425361 None:intergenic 25.0%
AAATTAATAGAACCAGTCGT+GGG - chr5.1:5426931-5426950 MS.gene21145:CDS 30.0%
AATAATGAACCCTTGAAATC+AGG - chr5.1:5423554-5423573 MS.gene21145:intron 30.0%
AATTCAATGGAATTCTCATG+GGG + chr5.1:5424521-5424540 None:intergenic 30.0%
ACAACTGAAATGGATATACA+TGG + chr5.1:5426904-5426923 None:intergenic 30.0%
ACTAAAACCCTAAAATATGC+GGG - chr5.1:5425184-5425203 MS.gene21145:intron 30.0%
AGAATACTTCGATCCAAATT+TGG - chr5.1:5426249-5426268 MS.gene21145:intron 30.0%
AGGAAATGAAAATGGTAGAA+AGG + chr5.1:5425008-5425027 None:intergenic 30.0%
ATAAACACATCTTATTGCTG+TGG + chr5.1:5427180-5427199 None:intergenic 30.0%
ATTCAGATAGCATAACCATA+AGG + chr5.1:5426546-5426565 None:intergenic 30.0%
CAATTCAATGGAATTCTCAT+GGG + chr5.1:5424522-5424541 None:intergenic 30.0%
CCCTTTAATTAGGAGTTTAT+AGG - chr5.1:5425052-5425071 MS.gene21145:intron 30.0%
CTTAATGTTAAGATTGGAAG+AGG - chr5.1:5423824-5423843 MS.gene21145:CDS 30.0%
GAAAGAATATGAAAAGGCTT+TGG - chr5.1:5426735-5426754 MS.gene21145:CDS 30.0%
GACTAAAACCCTAAAATATG+CGG - chr5.1:5425183-5425202 MS.gene21145:intron 30.0%
GATAGGAAGAGAAAAATCTA+AGG - chr5.1:5425929-5425948 MS.gene21145:intron 30.0%
GATGATGCAAGATATTCAAA+AGG - chr5.1:5423739-5423758 MS.gene21145:intron 30.0%
GATTTCAAGGGTTCATTATT+AGG + chr5.1:5423554-5423573 None:intergenic 30.0%
GGAAATATTAAACACATTGC+AGG + chr5.1:5426849-5426868 None:intergenic 30.0%
GGATCGAAATGAAAATCTTA+TGG + chr5.1:5425321-5425340 None:intergenic 30.0%
GTATATGAACCAAATTGAGA+AGG - chr5.1:5424554-5424573 MS.gene21145:CDS 30.0%
GTATGTTTAATCACACACTT+AGG + chr5.1:5424723-5424742 None:intergenic 30.0%
TAAAAGGGAGGAAATGAAAA+TGG + chr5.1:5425016-5425035 None:intergenic 30.0%
TAATACTCTTTGAATTCAGG+TGG - chr5.1:5426519-5426538 MS.gene21145:CDS 30.0%
TACTATAAGCCTGAAAGAAA+TGG + chr5.1:5426588-5426607 None:intergenic 30.0%
TAGTATCCAAAACATAACAG+CGG - chr5.1:5425731-5425750 MS.gene21145:intron 30.0%
TCAATTCAATGGAATTCTCA+TGG + chr5.1:5424523-5424542 None:intergenic 30.0%
! ATTCTCATGGGGTTTTTAAT+TGG + chr5.1:5424510-5424529 None:intergenic 30.0%
! GAGTCTTGTAAATGAATGTT+TGG - chr5.1:5424793-5424812 MS.gene21145:intron 30.0%
! TTAAGTTCCCGCATATTTTA+GGG + chr5.1:5425194-5425213 None:intergenic 30.0%
! TTAGTCTAGTTTCATTGCTA+AGG - chr5.1:5424272-5424291 MS.gene21145:intron 30.0%
! TTCGAAGGTACATATCATAT+TGG - chr5.1:5426815-5426834 MS.gene21145:CDS 30.0%
!! CTTTTTCTGGGAGAATATTA+AGG + chr5.1:5425343-5425362 None:intergenic 30.0%
!! TTATTCGAAAGCTTTGGAAT+TGG - chr5.1:5424078-5424097 MS.gene21145:CDS 30.0%
!! TTGTTGTTCTAGTTCTTTCT+TGG + chr5.1:5426230-5426249 None:intergenic 30.0%
!! TTTAAGTTCCCGCATATTTT+AGG + chr5.1:5425195-5425214 None:intergenic 30.0%
!!! AGTTAAACACTTTTTCACCT+AGG + chr5.1:5424441-5424460 None:intergenic 30.0%
!!! GTAACACTTTTTCAAGTATG+GGG + chr5.1:5424396-5424415 None:intergenic 30.0%
!!! GTTAAACACTTTTTCACCTA+GGG + chr5.1:5424440-5424459 None:intergenic 30.0%
AAGAAACCCGAAAAATCCTA+AGG - chr5.1:5426493-5426512 MS.gene21145:CDS 35.0%
AATGTTAAGATTGGAAGAGG+TGG - chr5.1:5423827-5423846 MS.gene21145:CDS 35.0%
AATTAATAGAACCAGTCGTG+GGG - chr5.1:5426932-5426951 MS.gene21145:CDS 35.0%
ACATGATAGCCTTCTCAATT+TGG + chr5.1:5424566-5424585 None:intergenic 35.0%
AGATTTCCTGGTGTTTGAAT+AGG - chr5.1:5425841-5425860 MS.gene21145:intron 35.0%
AGCTTCATTGAGTTTCTTCA+GGG + chr5.1:5426200-5426219 None:intergenic 35.0%
AGGAGTTTATAGGAGAATGA+AGG - chr5.1:5425062-5425081 MS.gene21145:intron 35.0%
ATAAACCAAAGTCAACCTTC+AGG + chr5.1:5425468-5425487 None:intergenic 35.0%
ATAGGATTAGGAAGATTTCC+TGG - chr5.1:5425895-5425914 MS.gene21145:intron 35.0%
ATTCTTCAACATTTGGAGGA+CGG + chr5.1:5424887-5424906 None:intergenic 35.0%
CAAATTAATAGAACCAGTCG+TGG - chr5.1:5426930-5426949 MS.gene21145:CDS 35.0%
CCTCATACTGAAAAGATTCA+AGG + chr5.1:5425991-5426010 None:intergenic 35.0%
CTATCTGAATCCTAACAAGT+TGG - chr5.1:5426556-5426575 MS.gene21145:CDS 35.0%
CTGTTTCAGCTTACAAGAAA+GGG - chr5.1:5423516-5423535 MS.gene21145:intron 35.0%
GAAGAAAAATATGCCATGCA+AGG + chr5.1:5425159-5425178 None:intergenic 35.0%
GTGTAATGCTTAATAGCTTC+AGG + chr5.1:5426461-5426480 None:intergenic 35.0%
GTTAAAGGGTCATTTAACTC+CGG + chr5.1:5425542-5425561 None:intergenic 35.0%
TAATGCTGCGTATAAGAAGA+AGG - chr5.1:5424033-5424052 MS.gene21145:intron 35.0%
TATGAAAACCTTGTCTTGCA+GGG - chr5.1:5426408-5426427 MS.gene21145:intron 35.0%
TCCTAATTAAAGGGTAGTGA+AGG + chr5.1:5425046-5425065 None:intergenic 35.0%
TCTGCATTATTCGAAAGCTT+TGG - chr5.1:5424072-5424091 MS.gene21145:CDS 35.0%
TGAAGATAAACCCTAGTTGT+AGG + chr5.1:5423701-5423720 None:intergenic 35.0%
TGCATCATCTTCACAAAATC+AGG + chr5.1:5423728-5423747 None:intergenic 35.0%
TGGAATACTCCATTTCTTTC+AGG - chr5.1:5426576-5426595 MS.gene21145:CDS 35.0%
TGTATACTTGGAAATGGGAA+AGG - chr5.1:5424138-5424157 MS.gene21145:intron 35.0%
TTACTTCATCTGGACAATTC+CGG + chr5.1:5427315-5427334 None:intergenic 35.0%
TTCAAGACTGCTGAGAATTT+GGG - chr5.1:5425577-5425596 MS.gene21145:intron 35.0%
TTGAGAAGGCTATCATGTAT+TGG - chr5.1:5424568-5424587 MS.gene21145:intron 35.0%
TTGTATCCTATTCAAACACC+AGG + chr5.1:5425850-5425869 None:intergenic 35.0%
TTTCAAGACTGCTGAGAATT+TGG - chr5.1:5425576-5425595 MS.gene21145:intron 35.0%
TTTGCTTCACACAACTGAAA+TGG + chr5.1:5426914-5426933 None:intergenic 35.0%
! AAGCTTGTTTCAGTGTTTGA+TGG - chr5.1:5425765-5425784 MS.gene21145:intron 35.0%
! ACAAAACCGCTGTTATGTTT+TGG + chr5.1:5425740-5425759 None:intergenic 35.0%
! AGAGAGTTATGCAAGCTTTT+GGG - chr5.1:5423795-5423814 MS.gene21145:CDS 35.0%
! ATGGAGTATTCCAACTTGTT+AGG + chr5.1:5426569-5426588 None:intergenic 35.0%
! CCTTGAATCTTTTCAGTATG+AGG - chr5.1:5425988-5426007 MS.gene21145:intron 35.0%
! TTAAAGCGTCAGTGTAATTC+TGG + chr5.1:5423400-5423419 None:intergenic 35.0%
! TTTTGGTAAGTCTCAATGAC+AGG + chr5.1:5426148-5426167 None:intergenic 35.0%
!! AGTGAAGGCTTTGGATAAAA+GGG + chr5.1:5425031-5425050 None:intergenic 35.0%
!! TAGTGAAGGCTTTGGATAAA+AGG + chr5.1:5425032-5425051 None:intergenic 35.0%
!! TGATTTTCCAGCAGAGTATT+TGG - chr5.1:5425636-5425655 MS.gene21145:intron 35.0%
!! TTTGATTTGTTCCTGACACT+TGG - chr5.1:5424633-5424652 MS.gene21145:intron 35.0%
!!! GAATGAAGGAGAGTGTTTTT+TGG - chr5.1:5425076-5425095 MS.gene21145:intron 35.0%
!!! GACAGGTTTGCTTTTTTTCT+TGG - chr5.1:5427129-5427148 MS.gene21145:CDS 35.0%
AAAATATGCCATGCAAGGTG+AGG + chr5.1:5425154-5425173 None:intergenic 40.0%
AACAACCAGGAATTGCTTGA+AGG - chr5.1:5426790-5426809 MS.gene21145:CDS 40.0%
AAGCAAACCTGTCTCATAAC+AGG + chr5.1:5427122-5427141 None:intergenic 40.0%
ACAACCAGGAATTGCTTGAA+GGG - chr5.1:5426791-5426810 MS.gene21145:CDS 40.0%
ACCTAGGGAAAAAGTTGAAC+AGG + chr5.1:5424425-5424444 None:intergenic 40.0%
ACTGTGCTATCTCTATGCAA+AGG - chr5.1:5424351-5424370 MS.gene21145:CDS 40.0%
AGCAAACCTGTCTCATAACA+GGG + chr5.1:5427121-5427140 None:intergenic 40.0%
AGCTGCATGTTACACAAAAC+TGG - chr5.1:5426612-5426631 MS.gene21145:CDS 40.0%
ATAATGTGGAAATAGAGGCC+AGG + chr5.1:5426351-5426370 None:intergenic 40.0%
ATAGGATTGGGAAGATTTCC+TGG - chr5.1:5425829-5425848 MS.gene21145:intron 40.0%
ATCGGCTAAACCTGATTTCA+AGG + chr5.1:5423567-5423586 None:intergenic 40.0%
ATCGTGGAATCTAATCACAC+CGG - chr5.1:5425520-5425539 MS.gene21145:intron 40.0%
ATCTCTTAGTCTGATCTTCC+AGG - chr5.1:5426298-5426317 MS.gene21145:intron 40.0%
ATGAGAGAACTCGGACAATT+TGG + chr5.1:5424925-5424944 None:intergenic 40.0%
CAGCTTCATTGAGTTTCTTC+AGG + chr5.1:5426201-5426220 None:intergenic 40.0%
CGGGAACTTAAAAATGCACT+GGG - chr5.1:5425203-5425222 MS.gene21145:intron 40.0%
CTGCATGTTACACAAAACTG+GGG - chr5.1:5426614-5426633 MS.gene21145:CDS 40.0%
CTGTGCTATCTCTATGCAAA+GGG - chr5.1:5424352-5424371 MS.gene21145:CDS 40.0%
GAAACATGATGCAAACAACC+AGG - chr5.1:5426777-5426796 MS.gene21145:CDS 40.0%
GAAACTCAATGAAGCTGAGA+AGG - chr5.1:5426204-5426223 MS.gene21145:intron 40.0%
GCCTTCACTACCCTTTAATT+AGG - chr5.1:5425042-5425061 MS.gene21145:intron 40.0%
GCTGCATGTTACACAAAACT+GGG - chr5.1:5426613-5426632 MS.gene21145:CDS 40.0%
GCTGCTGTATACTTGGAAAT+GGG - chr5.1:5424133-5424152 MS.gene21145:CDS 40.0%
GGATACTAAGTGCAATAAGC+AGG + chr5.1:5425719-5425738 None:intergenic 40.0%
GTATGAAAACCTTGTCTTGC+AGG - chr5.1:5426407-5426426 MS.gene21145:intron 40.0%
TACTGCTGATCCTACAACTA+GGG - chr5.1:5423688-5423707 MS.gene21145:intron 40.0%
TATTCATTCCCTGCAAGACA+AGG + chr5.1:5426419-5426438 None:intergenic 40.0%
TCCTATCCTATTCAAACACC+AGG + chr5.1:5425916-5425935 None:intergenic 40.0%
TCCTGGTGTTTGAATAGGAT+AGG - chr5.1:5425846-5425865 MS.gene21145:intron 40.0%
TCGGCTAAACCTGATTTCAA+GGG + chr5.1:5423566-5423585 None:intergenic 40.0%
TCTGCATCCTTTAAACCTTC+AGG + chr5.1:5426646-5426665 None:intergenic 40.0%
TGCATGTTACACAAAACTGG+GGG - chr5.1:5426615-5426634 MS.gene21145:CDS 40.0%
TGCTGCTGTATACTTGGAAA+TGG - chr5.1:5424132-5424151 MS.gene21145:CDS 40.0%
TGTAACTCCTGAAGAGTTGA+AGG - chr5.1:5426956-5426975 MS.gene21145:CDS 40.0%
TGTGATAAGGCTGTTGAAAG+AGG - chr5.1:5426025-5426044 MS.gene21145:intron 40.0%
TTAAAGGGTAGTGAAGGCTT+TGG + chr5.1:5425040-5425059 None:intergenic 40.0%
TTACTGCTGATCCTACAACT+AGG - chr5.1:5423687-5423706 MS.gene21145:intron 40.0%
TTGAATTCAGGTGGTCCTTA+TGG - chr5.1:5426528-5426547 MS.gene21145:CDS 40.0%
TTGAGAAAGACCAAGATGAG+CGG + chr5.1:5423486-5423505 None:intergenic 40.0%
TTGCAGCCAAAAAAGGAAAC+TGG + chr5.1:5426870-5426889 None:intergenic 40.0%
TTTCCAAGTATACAGCAGCA+CGG + chr5.1:5424132-5424151 None:intergenic 40.0%
! ACATGACTTGCAGCCAAAAA+AGG + chr5.1:5426877-5426896 None:intergenic 40.0%
! ACTCAAACCTGATTGGTCAA+AGG - chr5.1:5423442-5423461 MS.gene21145:intron 40.0%
! ATTAACTGCCCATTCGAGTT+AGG - chr5.1:5424974-5424993 MS.gene21145:intron 40.0%
! CAGAGAGTTATGCAAGCTTT+TGG - chr5.1:5423794-5423813 MS.gene21145:CDS 40.0%
! CTCAAACCTGATTGGTCAAA+GGG - chr5.1:5423443-5423462 MS.gene21145:intron 40.0%
! CTTTGGAAACATACCAGGAA+GGG - chr5.1:5426752-5426771 MS.gene21145:CDS 40.0%
! GAGAGTTATGCAAGCTTTTG+GGG - chr5.1:5423796-5423815 MS.gene21145:CDS 40.0%
! GCTGTTTCAGCTTACAAGAA+AGG - chr5.1:5423515-5423534 MS.gene21145:intron 40.0%
! TGAAGGATGTTCTGAATCTC+TGG + chr5.1:5427095-5427114 None:intergenic 40.0%
! TGATAGCAAGAGCTTTGACA+AGG - chr5.1:5426074-5426093 MS.gene21145:intron 40.0%
! TTAACTGCCCATTCGAGTTA+GGG - chr5.1:5424975-5424994 MS.gene21145:intron 40.0%
! TTCGACGGTTTTCTTTGCAT+CGG + chr5.1:5423423-5423442 None:intergenic 40.0%
! TTGTCCGAGTTCTCTCATTT+TGG - chr5.1:5424927-5424946 MS.gene21145:intron 40.0%
!! AAAAGCATCACCAAACGGAT+TGG + chr5.1:5423642-5423661 None:intergenic 40.0%
!! AAAGGCTTTGGAAACATACC+AGG - chr5.1:5426747-5426766 MS.gene21145:CDS 40.0%
!! AGCTTTGGAATTGGATGATG+AGG - chr5.1:5424087-5424106 MS.gene21145:CDS 40.0%
!! CCAGAAAAAGCATCACCAAA+CGG + chr5.1:5423647-5423666 None:intergenic 40.0%
!! GTAGCCTTAAGGCTTTGAAT+GGG + chr5.1:5425439-5425458 None:intergenic 40.0%
!! TAATGGTTGGCTTTGTATGC+AGG - chr5.1:5427199-5427218 MS.gene21145:CDS 40.0%
!! TCTCTCATTTTGGAGGGATT+TGG - chr5.1:5424937-5424956 MS.gene21145:intron 40.0%
!! TTGGCTTTGTATGCAGGTAT+TGG - chr5.1:5427205-5427224 MS.gene21145:CDS 40.0%
!!! AGGAGCATCTTCACTTTTTC+TGG + chr5.1:5425356-5425375 None:intergenic 40.0%
!!! GACTTTGAAGGGTGTTTTAG+AGG - chr5.1:5425230-5425249 MS.gene21145:intron 40.0%
!!! GGAGCATCTTCACTTTTTCT+GGG + chr5.1:5425355-5425374 None:intergenic 40.0%
AAAGTCAACCTTCAGGACCA+AGG + chr5.1:5425461-5425480 None:intergenic 45.0%
AACTCGGACAATTTGGAGGA+GGG + chr5.1:5424918-5424937 None:intergenic 45.0%
AATACAGGACGTGATTGGTG+GGG + chr5.1:5423349-5423368 None:intergenic 45.0%
AATTGCTTGAAGGGGTTCGA+AGG - chr5.1:5426800-5426819 MS.gene21145:CDS 45.0%
ACAAGGAAAGGAACTGCCAT+GGG - chr5.1:5426091-5426110 MS.gene21145:intron 45.0%
ACAGGAACATACCAAGAACC+CGG - chr5.1:5427256-5427275 MS.gene21145:CDS 45.0%
AGAGAACTCGGACAATTTGG+AGG + chr5.1:5424922-5424941 None:intergenic 45.0%
AGGAACTGCCATGGGTAAAA+CGG - chr5.1:5426099-5426118 MS.gene21145:intron 45.0%
ATAGTCCCCCTAACTCGAAT+GGG + chr5.1:5424985-5425004 None:intergenic 45.0%
ATCCAAAAGCTGATCAGTGC+CGG - chr5.1:5427293-5427312 MS.gene21145:CDS 45.0%
ATTGGTGGGGGAAAGATTGA+TGG + chr5.1:5423336-5423355 None:intergenic 45.0%
CAACCAGGAATTGCTTGAAG+GGG - chr5.1:5426792-5426811 MS.gene21145:CDS 45.0%
CACTGGGAGAAGACTTTGAA+GGG - chr5.1:5425219-5425238 MS.gene21145:intron 45.0%
CATCATGTTTCAACCCTTCC+TGG + chr5.1:5426768-5426787 None:intergenic 45.0%
CCCTCCAAAATGAGAGAACT+CGG + chr5.1:5424934-5424953 None:intergenic 45.0%
CGATCCAAATTTGGCTGATG+AGG - chr5.1:5426258-5426277 MS.gene21145:intron 45.0%
CTCTCCTCATCAGCCAAATT+TGG + chr5.1:5426265-5426284 None:intergenic 45.0%
CTGTAACCCTTTGACCAATC+AGG + chr5.1:5423452-5423471 None:intergenic 45.0%
GAATACAGGACGTGATTGGT+GGG + chr5.1:5423350-5423369 None:intergenic 45.0%
GCGGGAACTTAAAAATGCAC+TGG - chr5.1:5425202-5425221 MS.gene21145:intron 45.0%
GCTGATGAGGAGAGAGAAAA+AGG - chr5.1:5426271-5426290 MS.gene21145:intron 45.0%
GGCAATGCCTGAAGGTTTAA+AGG - chr5.1:5426636-5426655 MS.gene21145:CDS 45.0%
GTATAACCCTTGGTGAAGGT+CGG + chr5.1:5426688-5426707 None:intergenic 45.0%
GTCTCATAACAGGGTCTTGA+AGG + chr5.1:5427112-5427131 None:intergenic 45.0%
GTCTCCCATTCAAAGCCTTA+AGG - chr5.1:5425432-5425451 MS.gene21145:intron 45.0%
GTTGGAATACAGGACGTGAT+TGG + chr5.1:5423354-5423373 None:intergenic 45.0%
TATAACCCTTGGTGAAGGTC+GGG + chr5.1:5426687-5426706 None:intergenic 45.0%
TATCACCACTTCCAAGTGTC+AGG + chr5.1:5424647-5424666 None:intergenic 45.0%
TCAAAGCCTTAAGGCTACCT+TGG - chr5.1:5425441-5425460 MS.gene21145:intron 45.0%
TCAAGACCCTGTTATGAGAC+AGG - chr5.1:5427112-5427131 MS.gene21145:CDS 45.0%
TGAAGAGTTGAAGGAGAGAC+AGG - chr5.1:5426965-5426984 MS.gene21145:CDS 45.0%
TGATGGCATCTGAGAAGTGA+CGG + chr5.1:5423319-5423338 None:intergenic 45.0%
TGTCTCTCCTTCAACTCTTC+AGG + chr5.1:5426966-5426985 None:intergenic 45.0%
TTGTTCCTGACACTTGGAAG+TGG - chr5.1:5424639-5424658 MS.gene21145:intron 45.0%
! CCAATCAGGTTTGAGTTCGA+CGG + chr5.1:5423438-5423457 None:intergenic 45.0%
! CCGAGTTCTCTCATTTTGGA+GGG - chr5.1:5424931-5424950 MS.gene21145:intron 45.0%
! GCAAGAGCTTTGACAAGGAA+AGG - chr5.1:5426079-5426098 MS.gene21145:intron 45.0%
! TAACCGTGCTGCTGTATACT+TGG - chr5.1:5424126-5424145 MS.gene21145:CDS 45.0%
! TAACTGCCCATTCGAGTTAG+GGG - chr5.1:5424976-5424995 MS.gene21145:intron 45.0%
! TCCGAGTTCTCTCATTTTGG+AGG - chr5.1:5424930-5424949 MS.gene21145:intron 45.0%
! TGAGTTTCTTCAGGGTGTCT+GGG + chr5.1:5426192-5426211 None:intergenic 45.0%
! TTGAGTTTCTTCAGGGTGTC+TGG + chr5.1:5426193-5426212 None:intergenic 45.0%
! TTGGTCCTGAAGGTTGACTT+TGG - chr5.1:5425460-5425479 MS.gene21145:intron 45.0%
! TTTTTCTGGACCGGAGATGT+GGG - chr5.1:5423658-5423677 MS.gene21145:intron 45.0%
!! GAAGGCTTTGGATAAAAGGG+AGG + chr5.1:5425028-5425047 None:intergenic 45.0%
!! GCAGGTATTGGTTGATTTCC+AGG - chr5.1:5427217-5427236 MS.gene21145:CDS 45.0%
!! GCCTGTTCAACTTTTTCCCT+AGG - chr5.1:5424421-5424440 MS.gene21145:CDS 45.0%
!! GCTTTGGAAACATACCAGGA+AGG - chr5.1:5426751-5426770 MS.gene21145:CDS 45.0%
!! GGTAGCCTTAAGGCTTTGAA+TGG + chr5.1:5425440-5425459 None:intergenic 45.0%
!!! CCGTTTGGTGATGCTTTTTC+TGG - chr5.1:5423644-5423663 MS.gene21145:CDS 45.0%
!!! GCATTTTGCCGTTTTACCCA+TGG + chr5.1:5426110-5426129 None:intergenic 45.0%
!!! TGGTGATGCTTTTTCTGGAC+CGG - chr5.1:5423649-5423668 MS.gene21145:intron 45.0%
AAAACTGAACCGCACCCTTC+CGG + chr5.1:5426711-5426730 None:intergenic 50.0%
ACCAAGGGTTATACCCGGAA+GGG - chr5.1:5426694-5426713 MS.gene21145:CDS 50.0%
AGACTAGAGAGAGAGAGGGA+GGG + chr5.1:5425416-5425435 None:intergenic 50.0%
AGGAGAAGGAAGTGAAGCAG+AGG - chr5.1:5423978-5423997 MS.gene21145:intron 50.0%
ATACAGCAGCACGGTTAGTG+AGG + chr5.1:5424123-5424142 None:intergenic 50.0%
ATACAGGACGTGATTGGTGG+GGG + chr5.1:5423348-5423367 None:intergenic 50.0%
ATGGGAGACTAGAGAGAGAG+AGG + chr5.1:5425421-5425440 None:intergenic 50.0%
CAGGAACATACCAAGAACCC+GGG - chr5.1:5427257-5427276 MS.gene21145:CDS 50.0%
CCGTCGAACTCAAACCTGAT+TGG - chr5.1:5423435-5423454 MS.gene21145:intron 50.0%
CCTTCACCAAGGGTTATACC+CGG - chr5.1:5426689-5426708 MS.gene21145:CDS 50.0%
CTTGCAGGAAATGAAGAGCC+TGG + chr5.1:5426319-5426338 None:intergenic 50.0%
GAACCCCTTCAAGCAATTCC+TGG + chr5.1:5426798-5426817 None:intergenic 50.0%
GAACTCGGACAATTTGGAGG+AGG + chr5.1:5424919-5424938 None:intergenic 50.0%
GAAGGAAGTGAAGCAGAGGA+AGG - chr5.1:5423982-5424001 MS.gene21145:intron 50.0%
GACAAGGAAAGGAACTGCCA+TGG - chr5.1:5426090-5426109 MS.gene21145:intron 50.0%
GAGGATGCCAAATACTCTGC+TGG + chr5.1:5425646-5425665 None:intergenic 50.0%
GATAGTCCCCCTAACTCGAA+TGG + chr5.1:5424986-5425005 None:intergenic 50.0%
GCACTGGGAGAAGACTTTGA+AGG - chr5.1:5425218-5425237 MS.gene21145:intron 50.0%
GGAATACAGGACGTGATTGG+TGG + chr5.1:5423351-5423370 None:intergenic 50.0%
GTAAGTTTCGCCCACATCTC+CGG + chr5.1:5423671-5423690 None:intergenic 50.0%
TAAGGCTACCTTGGTCCTGA+AGG - chr5.1:5425450-5425469 MS.gene21145:intron 50.0%
TCAAAGGGTTACAGCCGTCT+CGG - chr5.1:5423458-5423477 MS.gene21145:CDS 50.0%
TGGAAATAGAGGCCAGGAGA+AGG + chr5.1:5426345-5426364 None:intergenic 50.0%
TGGATCTTGTCCATCACACC+CGG + chr5.1:5427278-5427297 None:intergenic 50.0%
TGGGAGACTAGAGAGAGAGA+GGG + chr5.1:5425420-5425439 None:intergenic 50.0%
! AACTGCCCATTCGAGTTAGG+GGG - chr5.1:5424977-5424996 MS.gene21145:intron 50.0%
! ACTAGTCTCCTCACCTTGCA+TGG - chr5.1:5425143-5425162 MS.gene21145:intron 50.0%
! CTTTTTCTGGACCGGAGATG+TGG - chr5.1:5423657-5423676 MS.gene21145:intron 50.0%
! GGTGCTCTGTAAGCGCTTTT+TGG + chr5.1:5426165-5426184 None:intergenic 50.0%
! TCAGGACCAAGGTAGCCTTA+AGG + chr5.1:5425450-5425469 None:intergenic 50.0%
! TCTTCAGGGTGTCTGGGTTA+CGG + chr5.1:5426186-5426205 None:intergenic 50.0%
! TGGAAGAGGTGGTGATGATG+TGG - chr5.1:5423838-5423857 MS.gene21145:CDS 50.0%
!! ATCTGAGAAGTGACGGATGG+CGG + chr5.1:5423312-5423331 None:intergenic 50.0%
!! GCCTTTGGCTTTAGCTTCGT+CGG + chr5.1:5423258-5423277 None:intergenic 50.0%
!!! TTCCGGCACTGATCAGCTTT+TGG + chr5.1:5427298-5427317 None:intergenic 50.0%
AAACTGAACCGCACCCTTCC+GGG + chr5.1:5426710-5426729 None:intergenic 55.0%
AAACTGGGGGCAATGCCTGA+AGG - chr5.1:5426628-5426647 MS.gene21145:CDS 55.0%
AATGGAGGAGGTGGCTGATG+AGG - chr5.1:5423958-5423977 MS.gene21145:CDS 55.0%
ACCCTTCCGGGTATAACCCT+TGG + chr5.1:5426698-5426717 None:intergenic 55.0%
AGCAGCACGGTTAGTGAGGA+AGG + chr5.1:5424119-5424138 None:intergenic 55.0%
AGCCGATGCTCAAAAAGCCG+CGG - chr5.1:5423580-5423599 MS.gene21145:intron 55.0%
AGCTCTCTTCCTCTCCGAAC+TGG + chr5.1:5423882-5423901 None:intergenic 55.0%
AGGAGTTACATCCCCACGAC+TGG + chr5.1:5426946-5426965 None:intergenic 55.0%
AGTGAAGCAGAGGAAGGCTG+AGG - chr5.1:5423988-5424007 MS.gene21145:intron 55.0%
ATATGCCGTCCAGTTCGGAG+AGG - chr5.1:5423870-5423889 MS.gene21145:CDS 55.0%
CACCAAGGGTTATACCCGGA+AGG - chr5.1:5426693-5426712 MS.gene21145:CDS 55.0%
CAGCGGATCGGTTGGAATAC+AGG + chr5.1:5423364-5423383 None:intergenic 55.0%
CCGGGTATAACCCTTGGTGA+AGG + chr5.1:5426692-5426711 None:intergenic 55.0%
CTCTTCCTCTCCGAACTGGA+CGG + chr5.1:5423878-5423897 None:intergenic 55.0%
CTTGACCCGACCTTCACCAA+GGG - chr5.1:5426679-5426698 MS.gene21145:CDS 55.0%
GAAGAGAGCTGCTGAACCTG+AGG - chr5.1:5423892-5423911 MS.gene21145:CDS 55.0%
GACTAGAGAGAGAGAGGGAG+GGG + chr5.1:5425415-5425434 None:intergenic 55.0%
GAGACTAGAGAGAGAGAGGG+AGG + chr5.1:5425417-5425436 None:intergenic 55.0%
GCCGACGAAGCTAAAGCCAA+AGG - chr5.1:5423254-5423273 MS.gene21145:CDS 55.0%
GCCTGATATGCCGTCCAGTT+CGG - chr5.1:5423865-5423884 MS.gene21145:CDS 55.0%
GGAGAATGCAGCGTTGCCTT+TGG + chr5.1:5423273-5423292 None:intergenic 55.0%
GGATCTTGTCCATCACACCC+GGG + chr5.1:5427277-5427296 None:intergenic 55.0%
TACCAAGAACCCGGGTGTGA+TGG - chr5.1:5427265-5427284 MS.gene21145:CDS 55.0%
TCATCAGCCACCTCCTCCAT+TGG + chr5.1:5423959-5423978 None:intergenic 55.0%
TCCGAACTGGACGGCATATC+AGG + chr5.1:5423869-5423888 None:intergenic 55.0%
TCCTGCAAGCATCCTTCTCC+TGG - chr5.1:5426330-5426349 MS.gene21145:intron 55.0%
TGAACCTGAGGTGGCAAAGC+AGG - chr5.1:5423904-5423923 MS.gene21145:CDS 55.0%
! GGCATCTGAGAAGTGACGGA+TGG + chr5.1:5423315-5423334 None:intergenic 55.0%
!! TCACCAAACGGATTGGCACC+CGG + chr5.1:5423635-5423654 None:intergenic 55.0%
ACCTGAGGTGGCAAAGCAGG+CGG - chr5.1:5423907-5423926 MS.gene21145:CDS 60.0%
AGAGAGAGAGAGGGAGGGGA+CGG + chr5.1:5425411-5425430 None:intergenic 60.0%
CCTAGAAAAACTCGCCGCCG+CGG + chr5.1:5423600-5423619 None:intergenic 60.0%
CGATGCTCAAAAAGCCGCGG+CGG - chr5.1:5423583-5423602 MS.gene21145:intron 60.0%
GAGAGCTGCTGAACCTGAGG+TGG - chr5.1:5423895-5423914 MS.gene21145:CDS 60.0%
GCCAGGAGAAGGATGCTTGC+AGG + chr5.1:5426334-5426353 None:intergenic 60.0%
GCTTGACCCGACCTTCACCA+AGG - chr5.1:5426678-5426697 MS.gene21145:CDS 60.0%
GGAGGTGGCTGATGAGGAGA+AGG - chr5.1:5423964-5423983 MS.gene21145:CDS 60.0%
GGCAACGCTGCATTCTCCTC+CGG - chr5.1:5423275-5423294 MS.gene21145:CDS 60.0%
GGGCGAAGGGGGTAGAGAAT+AGG + chr5.1:5425376-5425395 None:intergenic 60.0%
GGGTTATACCCGGAAGGGTG+CGG - chr5.1:5426699-5426718 MS.gene21145:CDS 60.0%
GTCCATCACACCCGGGTTCT+TGG + chr5.1:5427270-5427289 None:intergenic 60.0%
TGAGGCGCAGAAGGAGAAGG+AGG - chr5.1:5424006-5424025 MS.gene21145:intron 60.0%
TTCTAGGCCACGTTCTGCGC+CGG - chr5.1:5423613-5423632 MS.gene21145:CDS 60.0%
! CAAGATGAGCGGCACCGAGA+CGG + chr5.1:5423475-5423494 None:intergenic 60.0%
! CTGGAGAGAAGCGTGAGCAG+CGG + chr5.1:5423381-5423400 None:intergenic 60.0%
! GAGAAGCGTGAGCAGCGGAT+CGG + chr5.1:5423376-5423395 None:intergenic 60.0%
! GATGGCGGTTGCGAAATCGC+CGG + chr5.1:5423297-5423316 None:intergenic 60.0%
!! CGCCGCGGCTTTTTGAGCAT+CGG + chr5.1:5423585-5423604 None:intergenic 60.0%
!! TCCTCCATTGGCTCCGGTTC+CGG + chr5.1:5423947-5423966 None:intergenic 60.0%
ACCGGAGCCAATGGAGGAGG+TGG - chr5.1:5423949-5423968 MS.gene21145:CDS 65.0%
AGCGTGAGCAGCGGATCGGT+TGG + chr5.1:5423372-5423391 None:intergenic 65.0%
AGGGGACGGCGAAGGGCTTT+GGG + chr5.1:5425397-5425416 None:intergenic 65.0%
GAGGAAGGCTGAGGCGCAGA+AGG - chr5.1:5423997-5424016 MS.gene21145:intron 65.0%
GCGCAGAAGGAGAAGGAGGC+TGG - chr5.1:5424010-5424029 MS.gene21145:intron 65.0%
GGAACCGGAGCCAATGGAGG+AGG - chr5.1:5423946-5423965 MS.gene21145:CDS 65.0%
GGCTGAGGCGCAGAAGGAGA+AGG - chr5.1:5424003-5424022 MS.gene21145:intron 65.0%
GGTTGAGCCTGAGCCGGAAC+CGG - chr5.1:5423931-5423950 MS.gene21145:CDS 65.0%
TCCGCCTGCTTTGCCACCTC+AGG + chr5.1:5423911-5423930 None:intergenic 65.0%
TCTAGGCCACGTTCTGCGCC+GGG - chr5.1:5423614-5423633 MS.gene21145:CDS 65.0%
TGAGCCGGAACCGGAGCCAA+TGG - chr5.1:5423940-5423959 MS.gene21145:CDS 65.0%
TGAGGTGGCAAAGCAGGCGG+AGG - chr5.1:5423910-5423929 MS.gene21145:CDS 65.0%
! ATTGGCTCCGGTTCCGGCTC+AGG + chr5.1:5423941-5423960 None:intergenic 65.0%
! CCGCGGCGGCGAGTTTTTCT+AGG - chr5.1:5423597-5423616 MS.gene21145:intron 65.0%
!! CGAAGGGCTTTGGGGCGAAG+GGG + chr5.1:5425388-5425407 None:intergenic 65.0%
!! CGTCTCGGTGCCGCTCATCT+TGG - chr5.1:5423473-5423492 MS.gene21145:CDS 65.0%
!! GAAGGGCTTTGGGGCGAAGG+GGG + chr5.1:5425387-5425406 None:intergenic 65.0%
!! GCCACCTCCTCCATTGGCTC+CGG + chr5.1:5423953-5423972 None:intergenic 65.0%
!! GCGAAGGGCTTTGGGGCGAA+GGG + chr5.1:5425389-5425408 None:intergenic 65.0%
AGAGAGGGAGGGGACGGCGA+AGG + chr5.1:5425405-5425424 None:intergenic 70.0%
GAGAGGGAGGGGACGGCGAA+GGG + chr5.1:5425404-5425423 None:intergenic 70.0%
GAGGGGACGGCGAAGGGCTT+TGG + chr5.1:5425398-5425417 None:intergenic 70.0%
GCCGGAACCGGAGCCAATGG+AGG - chr5.1:5423943-5423962 MS.gene21145:CDS 70.0%
GCGCCGGGTGCCAATCCGTT+TGG - chr5.1:5423629-5423648 MS.gene21145:CDS 70.0%
GGCGGAGGTTGAGCCTGAGC+CGG - chr5.1:5423925-5423944 MS.gene21145:CDS 70.0%
GGCGGTTGCGAAATCGCCGG+AGG + chr5.1:5423294-5423313 None:intergenic 70.0%
GGGGACGGCGAAGGGCTTTG+GGG + chr5.1:5425396-5425415 None:intergenic 70.0%
TTGGCACCCGGCGCAGAACG+TGG + chr5.1:5423623-5423642 None:intergenic 70.0%
!! GGCGAAGGGCTTTGGGGCGA+AGG + chr5.1:5425390-5425409 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 5423251 5427334 5423251 ID=MS.gene21145
chr5.1 mRNA 5423251 5427334 5423251 ID=MS.gene21145.t1;Parent=MS.gene21145
chr5.1 exon 5426426 5427334 5426426 ID=MS.gene21145.t1.exon1;Parent=MS.gene21145.t1
chr5.1 CDS 5426426 5427334 5426426 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
chr5.1 exon 5424293 5424581 5424293 ID=MS.gene21145.t1.exon2;Parent=MS.gene21145.t1
chr5.1 CDS 5424293 5424581 5424293 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
chr5.1 exon 5424071 5424156 5424071 ID=MS.gene21145.t1.exon3;Parent=MS.gene21145.t1
chr5.1 CDS 5424071 5424156 5424071 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
chr5.1 exon 5423764 5423987 5423764 ID=MS.gene21145.t1.exon4;Parent=MS.gene21145.t1
chr5.1 CDS 5423764 5423987 5423764 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
chr5.1 exon 5423599 5423665 5423599 ID=MS.gene21145.t1.exon5;Parent=MS.gene21145.t1
chr5.1 CDS 5423599 5423665 5423599 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
chr5.1 exon 5423452 5423511 5423452 ID=MS.gene21145.t1.exon6;Parent=MS.gene21145.t1
chr5.1 CDS 5423452 5423511 5423452 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
chr5.1 exon 5423251 5423364 5423251 ID=MS.gene21145.t1.exon7;Parent=MS.gene21145.t1
chr5.1 CDS 5423251 5423364 5423251 ID=cds.MS.gene21145.t1;Parent=MS.gene21145.t1
Gene Sequence

>MS.gene21145

ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCTGCATTCTCCTCCGGCGATTTCGCAACCGCCATCCGTCACTTCTCAGATGCCATCAATCTTTCCCCCACCAATCACGTCCTGTATTCCAACCGATCCGCTGCTCACGCTTCTCTCCAGAATTACACTGACGCTTTAACCGATGCAAAGAAAACCGTCGAACTCAAACCTGATTGGTCAAAGGGTTACAGCCGTCTCGGTGCCGCTCATCTTGGTCTTTCTCAATACGACGAAGCTGTTTCAGCTTACAAGAAAGGGTTAGAAATTGATCCTAATAATGAACCCTTGAAATCAGGTTTAGCCGATGCTCAAAAAGCCGCGGCGGCGAGTTTTTCTAGGCCACGTTCTGCGCCGGGTGCCAATCCGTTTGGTGATGCTTTTTCTGGACCGGAGATGTGGGCGAAACTTACTGCTGATCCTACAACTAGGGTTTATCTTCAACAGCCTGATTTTGTGAAGATGATGCAAGATATTCAAAAGGATCCCAATAATTTGAATTTGTATTTGAAGGATCAGAGAGTTATGCAAGCTTTTGGGGTTTTGCTTAATGTTAAGATTGGAAGAGGTGGTGATGATGTGGATATGCCTGATATGCCGTCCAGTTCGGAGAGGAAGAGAGCTGCTGAACCTGAGGTGGCAAAGCAGGCGGAGGTTGAGCCTGAGCCGGAACCGGAGCCAATGGAGGAGGTGGCTGATGAGGAGAAGGAAGTGAAGCAGAGGAAGGCTGAGGCGCAGAAGGAGAAGGAGGCTGGTAATGCTGCGTATAAGAAGAAGGATTTTGATACTGCGATTCTGCATTATTCGAAAGCTTTGGAATTGGATGATGAGGATGTTTCCTTCCTCACTAACCGTGCTGCTGTATACTTGGAAATGGGAAAGGTATCAATTTGCCTATTTATATATTTTTGACAAATATTTATCTATATGTATATGTGTGTATGCATTCTGCTTCTATTGTTTGTTAATTATGCACTGTTCTATCTAAGTTTATTTAGTCTAGTTTCATTGCTAAGGTTATTTATTTGAGTATAATTTTACTGCTTACTTGCTTAGTTATAGTATATGGTCTAACTGTGCTATCTCTATGCAAAGGGCAGTGATTTTTAATTTGACCCCATACTTGAAAAAGTGTTACATTTAGCCTGTTCAACTTTTTCCCTAGGTGAAAAAGTGTTTAACTTAGTCTGTTGTGTACTTGTACTCAAAACTTGTCCTTTTAACTATTTCCAATTAAAAACCCCATGAGAATTCCATTGAATTGATGTACTATCAAGTATATGAACCAAATTGAGAAGGCTATCATGTATTGGCCATGAAAATACATTACTTTGTTTTTTATGTGGGACAAGTATTTTGATTTGTTCCTGACACTTGGAAGTGGTGATAATGCATCTTACTGTTAGACAGAACTGTTTTTTTATGAAAGCTGGAAATTATCTCCTAAGTGTGTGATTAAACATACTTTTGTTTGTGGGTGATGCGTTGATATCTATGACGCTCTCAATTTTGAGAGAGTCTTGTAAATGAATGTTTGGGATTAATATAATTTTCATTTTGAGCGTATTATTATGATATATGTATTGGATTTGAAGAATTTATCAAACCGTCCTCCAAATGTTGAAGAATTTATCTAACCCTCCTCCAAATTGTCCGAGTTCTCTCATTTTGGAGGGATTTGGTATTATAAAGAAAAATTAACTGCCCATTCGAGTTAGGGGGACTATCCTTTCTACCATTTTCATTTCCTCCCTTTTATCCAAAGCCTTCACTACCCTTTAATTAGGAGTTTATAGGAGAATGAAGGAGAGTGTTTTTTGGATAAAAGAAGTAAAAAAGGGAAGTTGTGACTGACTGACTGACTGACTAGTCTCCTCACCTTGCATGGCATATTTTTCTTCAATAGACTAAAACCCTAAAATATGCGGGAACTTAAAAATGCACTGGGAGAAGACTTTGAAGGGTGTTTTAGAGGATTTTTAATAAATTTTTAAATCCATTATTTTCTTTATTAGACTTTCAAAATGTAAAAAATATCATCCATAAGATTTTCATTTCGATCCCTTAATATTCTCCCAGAAAAAGTGAAGATGCTCCTATTCTCTACCCCCTTCGCCCCAAAGCCCTTCGCCGTCCCCTCCCTCTCTCTCTCTAGTCTCCCATTCAAAGCCTTAAGGCTACCTTGGTCCTGAAGGTTGACTTTGGTTTATTATCATGAACTGCATGTCTTAGAAATTCTTTAATCGTGGAATCTAATCACACCGGAGTTAAATGACCCTTTAACAACCCCAATAATATTTTCAAGACTGCTGAGAATTTGGGATTTTATGTAGTTATACCGTTATATGCATAATACTCTGATTTTCCAGCAGAGTATTTGGCATCCTCCAATAGTATTAGATATTTATGAAGTGTCAGTCTTGAGATCTATAATTATACCTGCTTATTGCACTTAGTATCCAAAACATAACAGCGGTTTTGTTGTTAAAGCTTGTTTCAGTGTTTGATGGTTACAGAACTTGTCAAATTTTACTATGGTTTGAGTGTTTAAATAGGATTGGGAAGATTTCCTGGTGTTTGAATAGGATACAAATTTTACTATGGTTTGAGTGTTTAAATAGGATTAGGAAGATTTCCTGGTGTTTGAATAGGATAGGAAGAGAAAAATCTAAGGGTTTTTTAATGTTAAGTCAAGGGCCAATTCAATATTCCTTGAATCTTTTCAGTATGAGGATTGCATAAAAGATTGTGATAAGGCTGTTGAAAGAGGACGAGAGCTAAGAGCAGACTACAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCATGGGTAAAACGGCAAAATGCTCTAAAGATTATGAACCTGTCATTGAGACTTACCAAAAAGCGCTTACAGAGCACCGTAACCCAGACACCCTGAAGAAACTCAATGAAGCTGAGAAGGCCAAGAAAGAACTAGAACAACAAGAATACTTCGATCCAAATTTGGCTGATGAGGAGAGAGAAAAAGGTACTATCTCTTAGTCTGATCTTCCAGGCTCTTCATTTCCTGCAAGCATCCTTCTCCTGGCCTCTATTTCCACATTATTGTTTTGACTCAATCTTATTTGTAGACTGTGTTAATGTATGAAAACCTTGTCTTGCAGGGAATGAATACTTTAAGCAGCAGAAGTATCCTGAAGCTATTAAGCATTACACAGAGTCTATAAAAAGAAACCCGAAAAATCCTAAGGTAATAATACTCTTTGAATTCAGGTGGTCCTTATGGTTATGCTATCTGAATCCTAACAAGTTGGAATACTCCATTTCTTTCAGGCTTATAGTAACAGAGCTGCATGTTACACAAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGTATTGAGCTTGACCCGACCTTCACCAAGGGTTATACCCGGAAGGGTGCGGTTCAGTTTTTCATGAAAGAATATGAAAAGGCTTTGGAAACATACCAGGAAGGGTTGAAACATGATGCAAACAACCAGGAATTGCTTGAAGGGGTTCGAAGGTACATATCATATTGGTTAAAATCCCTGCAATGTGTTTAATATTTCCAGTTTCCTTTTTTGGCTGCAAGTCATGTTTAACCATGTATATCCATTTCAGTTGTGTGAAGCAAATTAATAGAACCAGTCGTGGGGATGTAACTCCTGAAGAGTTGAAGGAGAGACAGGTTTGTCATATAGTGCGAAAATCTTTGCAATCAGAAATTATAATTTAAATATGATATGATATATGCTGTATTTTGAATATTTTTCAGGCTAAGGCAATGCAAGATCCAGAGATTCAGAACATCCTTCAAGACCCTGTTATGAGACAGGTTTGCTTTTTTTCTTGGCTGCATAATAATTGTGTATAATGTACCACAGCAATAAGATGTGTTTATAATGGTTGGCTTTGTATGCAGGTATTGGTTGATTTCCAGGAAAATCCAAAGGCTGCACAGGAACATACCAAGAACCCGGGTGTGATGGACAAGATCCAAAAGCTGATCAGTGCCGGAATTGTCCAGATGAAGTAA
Protein sequence

>MS.gene21145.t1

MADEAKAKGNAAFSSGDFATAIRHFSDAINLSPTNHVLYSNRSAAHASLQNYTDALTDAKKTVELKPDWSKGYSRLGAAHLGLSQYDEAVSAYKKGLEIDPNNEPLKSGLADAQKAAAASFSRPRSAPGANPFGDAFSGPEMWAKLTADPTTRVYLQQPDFVKMMQDIQKDPNNLNLYLKDQRVMQAFGVLLNVKIGRGGDDVDMPDMPSSSERKRAAEPEVAKQAEVEPEPEPEPMEEVADEEKEVKQRKAEAQKEKEAGNAAYKKKDFDTAILHYSKALELDDEDVSFLTNRAAVYLEMGKYEDCIKDCDKAVERGRELRADYKMIARALTRKGTAMGKTAKCSKDYEPVIETYQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPNLADEEREKGNEYFKQQKYPEAIKHYTESIKRNPKNPKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKALETYQEGLKHDANNQELLEGVRSCVKQINRTSRGDVTPEELKERQAKAMQDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPGVMDKIQKLISAGIVQMK