AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09948

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09948.t1 MTR_5g012030 97.423 582 14 1 1 582 1 581 0.0 1175
MS.gene09948.t1 MTR_5g012050 72.381 105 28 1 241 345 3 106 4.60e-42 154
MS.gene09948.t1 MTR_3g452710 31.651 218 119 6 2 199 11 218 2.10e-19 92.0
MS.gene09948.t1 MTR_3g452710 31.897 116 79 0 393 508 11 126 1.09e-12 70.9
MS.gene09948.t1 MTR_1g041435 36.441 118 75 0 397 514 15 132 4.64e-19 89.0
MS.gene09948.t1 MTR_1g041435 35.354 99 64 0 6 104 15 113 1.46e-13 72.4
MS.gene09948.t1 MTR_3g452710 38.462 130 79 1 2 130 11 140 1.10e-17 87.0
MS.gene09948.t1 MTR_3g452710 31.897 116 79 0 393 508 11 126 1.12e-12 71.2
MS.gene09948.t1 MTR_7g115280 39.655 116 70 0 2 117 335 450 9.73e-17 83.6
MS.gene09948.t1 MTR_7g115280 33.065 124 80 1 393 513 335 458 1.71e-16 82.8
MS.gene09948.t1 MTR_1g030300 36.937 111 69 1 1 110 180 290 1.95e-16 82.8
MS.gene09948.t1 MTR_1g030300 31.092 119 81 1 385 502 173 291 2.84e-12 69.7
MS.gene09948.t1 MTR_5g009930 34.454 119 78 0 1 119 1 119 2.17e-16 80.9
MS.gene09948.t1 MTR_5g009930 29.060 117 83 0 392 508 1 117 8.76e-12 67.0
MS.gene09948.t1 MTR_5g009930 34.454 119 78 0 1 119 1 119 7.38e-16 80.1
MS.gene09948.t1 MTR_5g009930 29.060 117 83 0 392 508 1 117 1.07e-11 67.4
MS.gene09948.t1 MTR_6g053290 39.583 96 58 0 1 96 1 96 1.03e-13 73.2
MS.gene09948.t1 MTR_6g053290 26.923 156 99 1 392 532 1 156 2.43e-11 65.9
MS.gene09948.t1 MTR_6g053290 39.583 96 58 0 1 96 1 96 1.29e-13 73.2
MS.gene09948.t1 MTR_6g053290 26.923 156 99 1 392 532 1 156 2.81e-11 65.9
MS.gene09948.t1 MTR_2g078020 30.476 105 73 0 397 501 466 570 6.12e-13 72.0
MS.gene09948.t1 MTR_2g078020 30.476 105 73 0 397 501 466 570 6.26e-13 72.0
MS.gene09948.t1 MTR_7g059150 32.110 109 67 1 2 103 95 203 2.06e-12 68.2
MS.gene09948.t1 MTR_7g059150 27.536 138 85 2 372 502 82 211 6.41e-11 63.5
MS.gene09948.t1 MTR_4g094205 37.374 99 62 0 397 495 492 590 3.62e-12 69.7
MS.gene09948.t1 MTR_8g107280 29.630 135 89 1 367 495 447 581 1.54e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09948.t1 AT1G62740 73.299 588 134 4 1 582 1 571 0.0 880
MS.gene09948.t1 AT4G12400 71.870 583 138 4 1 582 1 558 0.0 879
MS.gene09948.t1 AT1G12270 73.083 587 138 6 1 582 1 572 0.0 845
MS.gene09948.t1 AT4G12400 71.298 547 131 4 1 546 1 522 0.0 817
MS.gene09948.t1 AT4G12400 33.333 186 123 1 392 576 1 186 5.94e-23 103
MS.gene09948.t1 AT1G04190 40.816 98 58 0 6 103 19 116 7.56e-18 85.5
MS.gene09948.t1 AT1G04190 39.623 106 64 0 397 502 19 124 1.25e-17 84.7
MS.gene09948.t1 AT4G08320 37.069 116 72 1 1 115 174 289 5.55e-17 84.0
MS.gene09948.t1 AT4G08320 33.094 139 86 3 372 508 158 291 8.11e-14 74.3
MS.gene09948.t1 AT4G08320 37.069 116 72 1 1 115 174 289 8.08e-17 83.6
MS.gene09948.t1 AT4G08320 33.094 139 86 3 372 508 158 291 6.30e-14 74.7
MS.gene09948.t1 AT3G04710 40.000 110 66 0 8 117 558 667 6.60e-16 81.6
MS.gene09948.t1 AT3G04710 30.841 107 74 0 399 505 558 664 2.59e-13 73.6
MS.gene09948.t1 AT3G04710 40.000 110 66 0 8 117 334 443 7.01e-16 80.9
MS.gene09948.t1 AT3G04710 30.841 107 74 0 399 505 334 440 1.47e-13 73.6
MS.gene09948.t1 AT3G04710 40.000 110 66 0 8 117 333 442 7.11e-16 80.9
MS.gene09948.t1 AT3G04710 30.841 107 74 0 399 505 333 439 1.45e-13 73.6
MS.gene09948.t1 AT4G11260 36.449 107 68 0 1 107 1 107 5.52e-15 77.4
MS.gene09948.t1 AT2G42810 33.621 116 77 0 2 117 13 128 5.84e-15 78.2
MS.gene09948.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.32e-14 77.0
MS.gene09948.t1 AT2G42810 33.621 116 77 0 2 117 13 128 5.84e-15 78.2
MS.gene09948.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.32e-14 77.0
MS.gene09948.t1 AT2G42810 33.621 116 77 0 2 117 13 128 5.84e-15 78.2
MS.gene09948.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.32e-14 77.0
MS.gene09948.t1 AT2G42810 33.621 116 77 0 2 117 13 128 1.04e-14 77.4
MS.gene09948.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.45e-14 77.0
MS.gene09948.t1 AT2G42810 33.621 116 77 0 2 117 13 128 1.08e-14 77.4
MS.gene09948.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.41e-14 77.0
MS.gene09948.t1 AT4G22670 36.893 103 65 0 2 104 123 225 8.77e-13 71.2
MS.gene09948.t1 AT3G17970 35.922 103 66 0 393 495 474 576 3.40e-12 69.7
MS.gene09948.t1 AT1G53300 28.829 111 79 0 391 501 463 573 6.72e-12 68.9
MS.gene09948.t1 AT1G78120 30.400 125 86 1 400 523 166 290 2.48e-11 66.6
MS.gene09948.t1 AT1G78120 30.400 125 86 1 400 523 166 290 2.66e-11 66.6
MS.gene09948.t1 AT3G58620 26.923 156 97 3 349 502 418 558 7.99e-11 65.5
MS.gene09948.t1 AT4G23570 27.473 182 118 5 25 202 25 196 8.27e-11 64.3
MS.gene09948.t1 AT4G23570 27.473 182 118 5 25 202 25 196 8.27e-11 64.3

Find 169 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCATCAGCCAAATT+TGG 0.136072 5.2:+4486328 None:intergenic
CAAATACAAATTCAAATTAT+TGG 0.139538 5.2:+4488746 None:intergenic
GATTTCAAGGGTTCATTATT+AGG 0.169330 5.2:+4488960 None:intergenic
CAGCTTCATTGAGTTTCTTC+AGG 0.191835 5.2:+4486392 None:intergenic
AGAATACTTCGATCCAAATT+TGG 0.199740 5.2:-4486341 MS.gene09948:CDS
TTGAGTTTCTTCAGGGTGTC+TGG 0.227086 5.2:+4486400 None:intergenic
TTGTTGTTCTAGTTCTTTCT+TGG 0.227451 5.2:+4486363 None:intergenic
CAAAGAGTTATGCAAGCTTT+TGG 0.253474 5.2:-4488717 MS.gene09948:CDS
TTCCGGCACTGATCAGCTTT+TGG 0.271295 5.2:+4485300 None:intergenic
AAATACAAATTCAAATTATT+GGG 0.271371 5.2:+4488747 None:intergenic
TTCCATCAATTTACTTCATC+TGG 0.271791 5.2:+4485273 None:intergenic
GTCCATCACACCCGGGTTCT+TGG 0.290667 5.2:+4485328 None:intergenic
GCAGGTATTGGTTGATTTCC+AGG 0.298727 5.2:-4485378 MS.gene09948:intron
AGCTGCATGTTACACAAAAC+TGG 0.310459 5.2:-4485978 MS.gene09948:CDS
TGCATCATCTTGACAAAATC+AGG 0.310714 5.2:+4488786 None:intergenic
TCCGAACTGGATGGCATATC+AGG 0.311097 5.2:+4488645 None:intergenic
TCCTCCATTGGCTCCGGTTC+CGG 0.312001 5.2:+4488567 None:intergenic
AAGCAAACCTGTCTCATAAC+AGG 0.314328 5.2:+4485469 None:intergenic
GGCAATGCCTGAAGGTTTAA+AGG 0.321704 5.2:-4485954 MS.gene09948:CDS
GCTGATGAGGAGAGAGAAAA+AGG 0.335378 5.2:-4486319 MS.gene09948:intron
TTAAAGCGTCAGTGTAATTC+TGG 0.337616 5.2:+4489114 None:intergenic
AAAACTGAACCGCACCCTTC+CGG 0.339040 5.2:+4485882 None:intergenic
TCTGCATCCTTTAAACCTTC+AGG 0.340625 5.2:+4485947 None:intergenic
TGTCTCTCCTTCAACTCTTC+AGG 0.344507 5.2:+4485627 None:intergenic
AATAATGAACCCTTGAAATC+AGG 0.348019 5.2:-4488957 MS.gene09948:CDS
GGAATACAGGACGTGGTTGG+TGG 0.360993 5.2:+4489163 None:intergenic
AAACTGAACCGCACCCTTCC+GGG 0.362337 5.2:+4485883 None:intergenic
GTATGTTCCTGTGCAGCCTT+AGG 0.362687 5.2:+4485350 None:intergenic
GAACCCCTTCAAGCAATTCC+TGG 0.364967 5.2:+4485795 None:intergenic
TTACTTCATCTGGACAATTC+CGG 0.371227 5.2:+4485283 None:intergenic
TAATTTGAATTTGTATTTGA+AGG 0.375764 5.2:-4488742 MS.gene09948:CDS
TAACCGTGCTGCTGTATACT+TGG 0.383148 5.2:-4488385 MS.gene09948:CDS
CTGTAACCCTTTGACCAATC+AGG 0.384513 5.2:+4489062 None:intergenic
ATTGGCTCCGGTTCCGGCTC+AGG 0.388295 5.2:+4488573 None:intergenic
GGAGAATGCAGCGTTGCCTT+TGG 0.390754 5.2:+4489241 None:intergenic
TTATTCGAAAGCTTTGGAAT+TGG 0.391355 5.2:-4488433 MS.gene09948:CDS
TCAGCATTATTCGAAAGCTT+TGG 0.396560 5.2:-4488439 MS.gene09948:CDS
TCCGCCTGCTTTGCCACCTC+AGG 0.396836 5.2:+4488603 None:intergenic
GTCTCATAACAGGGTCTTGA+AGG 0.401205 5.2:+4485479 None:intergenic
TGAAGGATGTTCTGAATCTC+TGG 0.407523 5.2:+4485496 None:intergenic
AAAGGCTTTGGAAACATATC+AGG 0.407801 5.2:-4485843 MS.gene09948:CDS
TCTTCAGGGTGTCTGGGTTA+CGG 0.408287 5.2:+4486407 None:intergenic
CAGCGGATCGGTTGGAATAC+AGG 0.412654 5.2:+4489150 None:intergenic
TGAAGATAAACCCTAGTTGT+AGG 0.413840 5.2:+4488813 None:intergenic
GTGTAATGCTTAATAGCTTC+AGG 0.414719 5.2:+4486132 None:intergenic
TCTAGGCCTCGTTCTGCGCC+GGG 0.417258 5.2:-4488897 MS.gene09948:CDS
TTCTAGGCCTCGTTCTGCGC+CGG 0.419715 5.2:-4488898 MS.gene09948:CDS
GCGCCGGGTGCTAATCCGTT+TGG 0.425654 5.2:-4488882 MS.gene09948:CDS
GAAAGAATATGAAAAGGCTT+TGG 0.427879 5.2:-4485855 MS.gene09948:CDS
ATCGGCTAAACCTGATTTCA+AGG 0.428004 5.2:+4488947 None:intergenic
AGCTTCATTGAGTTTCTTCA+GGG 0.428316 5.2:+4486393 None:intergenic
TGTAACTCCTGAAGAGTTGA+AGG 0.432085 5.2:-4485634 MS.gene09948:CDS
GCTGTTTCAGCTTACAAGAA+AGG 0.435873 5.2:-4488996 MS.gene09948:CDS
TGCTGCTGTATACTTGGAAA+TGG 0.437857 5.2:-4488379 MS.gene09948:CDS
GGCTTTAGCTTCGTCGGCCA+TGG 0.439401 5.2:+4489262 None:intergenic
TGAACCTGAGGTGGCAAAGC+AGG 0.443025 5.2:-4488607 MS.gene09948:CDS
CTCAAACCTGATTGGTCAAA+GGG 0.450036 5.2:-4489068 MS.gene09948:CDS
TGAAGAGTTGAAGGAGAGAC+AGG 0.450058 5.2:-4485625 MS.gene09948:intron
TGAGTTTCTTCAGGGTGTCT+GGG 0.451649 5.2:+4486401 None:intergenic
GGTTGAGCCTGAGCCGGAAC+CGG 0.452769 5.2:-4488580 MS.gene09948:CDS
CTGTTTCAGCTTACAAGAAA+GGG 0.455044 5.2:-4488995 MS.gene09948:CDS
GGAGGTGGCTGATGAGGAGA+AGG 0.455482 5.2:-4488547 MS.gene09948:CDS
AGCTCTCTTCCTCTCCGAAC+TGG 0.456503 5.2:+4488632 None:intergenic
TCATCAGCCACCTCCTCCAT+TGG 0.457433 5.2:+4488555 None:intergenic
TGGATCTTGTCCATCACACC+CGG 0.459995 5.2:+4485320 None:intergenic
GAGGAAGGCTGAGGCGCAGA+AGG 0.460304 5.2:-4488514 MS.gene09948:CDS
TCAAGACCCTGTTATGAGAC+AGG 0.467657 5.2:-4485476 MS.gene09948:intron
GCCTGATATGCCATCCAGTT+CGG 0.474772 5.2:-4488646 MS.gene09948:CDS
AGGAACTGCCATGGGTAAAA+CGG 0.477231 5.2:-4486491 MS.gene09948:CDS
CGATCCAAATTTGGCTGATG+AGG 0.478253 5.2:-4486332 MS.gene09948:CDS
CGTCTCGGTGCCGCTCATCT+CGG 0.479506 5.2:-4489038 MS.gene09948:CDS
TTTCATGAAAGAATATGAAA+AGG 0.488950 5.2:-4485861 MS.gene09948:CDS
TACTGCTGATCCTACAACTA+GGG 0.494571 5.2:-4488823 MS.gene09948:CDS
GCGCAGAAGGAGAAGGAGGC+TGG 0.498289 5.2:-4488501 MS.gene09948:CDS
CTTAATGTAAAGATTGGAAG+AGG 0.499999 5.2:-4488687 MS.gene09948:CDS
ACCCTTCCGGGTATAACCCT+TGG 0.502655 5.2:+4485895 None:intergenic
GCCACCTCCTCCATTGGCTC+CGG 0.504102 5.2:+4488561 None:intergenic
TGAGCCGGAACCGGAGCCAA+TGG 0.504535 5.2:-4488571 MS.gene09948:CDS
ATCCAAAAGCTGATCAGTGC+CGG 0.507708 5.2:-4485302 MS.gene09948:CDS
ACCGGAGCCAATGGAGGAGG+TGG 0.508880 5.2:-4488562 MS.gene09948:CDS
AACAACCAGGAATTGCTTGA+AGG 0.509120 5.2:-4485800 MS.gene09948:CDS
GCCTTTGGCTTTAGCTTCGT+CGG 0.510652 5.2:+4489256 None:intergenic
GTAAGTTTCGCCCACATCTC+CGG 0.511152 5.2:+4488843 None:intergenic
GGCGGAGGTTGAGCCTGAGC+CGG 0.511864 5.2:-4488586 MS.gene09948:CDS
AGGAGAAGGAAGTGAAGCAG+AGG 0.515007 5.2:-4488533 MS.gene09948:CDS
GTGCAGCCTTAGGATTATCC+TGG 0.515436 5.2:+4485360 None:intergenic
GATGATGCAAGATATTCAAA+AGG 0.519729 5.2:-4488772 MS.gene09948:CDS
TACCAAGAACCCGGGTGTGA+TGG 0.520879 5.2:-4485330 MS.gene09948:CDS
AGCGTGAGCAGCGGATCGGT+TGG 0.522057 5.2:+4489142 None:intergenic
TTGCATAAAAGATTGTGATA+AGG 0.530466 5.2:-4486578 MS.gene09948:CDS
AATACAGGACGTGGTTGGTG+GGG 0.535814 5.2:+4489165 None:intergenic
ATACAGGACGTGGTTGGTGG+GGG 0.536596 5.2:+4489166 None:intergenic
GCAAGAGCTTTGACAAGGAA+AGG 0.536678 5.2:-4486511 MS.gene09948:CDS
GGATAATCCTAAGGCTGCAC+AGG 0.537666 5.2:-4485357 MS.gene09948:CDS
AATGGAGGAGGTGGCTGATG+AGG 0.538534 5.2:-4488553 MS.gene09948:CDS
AGCAGCACGGTTAGTGAGGA+AGG 0.539890 5.2:+4488395 None:intergenic
TGAGGTGGCAAAGCAGGCGG+AGG 0.540052 5.2:-4488601 MS.gene09948:CDS
CCGTCGAACTCAAACCTGAT+TGG 0.540548 5.2:-4489076 MS.gene09948:CDS
GAATACAGGACGTGGTTGGT+GGG 0.541180 5.2:+4489164 None:intergenic
GGGTTATACCCGGAAGGGTG+CGG 0.542682 5.2:-4485891 MS.gene09948:CDS
TGATTTCCAGGATAATCCTA+AGG 0.545918 5.2:-4485366 MS.gene09948:CDS
CCAATCAGGTTTGAGTTCGA+CGG 0.546460 5.2:+4489076 None:intergenic
GGCTGAGGCGCAGAAGGAGA+AGG 0.547847 5.2:-4488508 MS.gene09948:CDS
ACAACCAGGAATTGCTTGAA+GGG 0.548142 5.2:-4485799 MS.gene09948:CDS
GAAACTCAATGAAGCTGAGA+AGG 0.551120 5.2:-4486386 MS.gene09948:CDS
GCTGCTGTATACTTGGAAAT+GGG 0.551340 5.2:-4488378 MS.gene09948:CDS
GGCAACGCTGCATTCTCCTC+CGG 0.551432 5.2:-4489236 MS.gene09948:CDS
GGAACCGGAGCCAATGGAGG+AGG 0.554085 5.2:-4488565 MS.gene09948:CDS
AGCTTTGGAATTGGATGATG+AGG 0.555608 5.2:-4488424 MS.gene09948:CDS
AGGAGTTACATCTCCACGAC+TGG 0.556546 5.2:+4485647 None:intergenic
GAAGAGAGCTGCTGAACCTG+AGG 0.556646 5.2:-4488619 MS.gene09948:CDS
CTCTTCCTCTCCGAACTGGA+TGG 0.557912 5.2:+4488636 None:intergenic
ACTCAAACCTGATTGGTCAA+AGG 0.563775 5.2:-4489069 MS.gene09948:CDS
TCAAAGGGTTACAGCCGTCT+CGG 0.565098 5.2:-4489053 MS.gene09948:CDS
TGGAAGAGGTGGTGATGATG+TGG 0.569802 5.2:-4488673 MS.gene09948:CDS
TGTGATAAGGCTGTTGAAAG+AGG 0.569985 5.2:-4486565 MS.gene09948:CDS
TAATGCTGCGTATAAGAAGA+AGG 0.570012 5.2:-4488478 MS.gene09948:CDS
TGTATACTTGGAAATGGGAA+AGG 0.572009 5.2:-4488373 MS.gene09948:intron
CACCAAGGGTTATACCCGGA+AGG 0.575257 5.2:-4485897 MS.gene09948:CDS
AATTGCTTGAAGGGGTTCGA+AGG 0.576444 5.2:-4485790 MS.gene09948:intron
CGAGATGAGCGGCACCGAGA+CGG 0.578173 5.2:+4489039 None:intergenic
GCTGCATGTTACACAAAACT+GGG 0.580641 5.2:-4485977 MS.gene09948:CDS
ACCTGAGGTGGCAAAGCAGG+CGG 0.581309 5.2:-4488604 MS.gene09948:CDS
CCGGGTATAACCCTTGGTGA+AGG 0.581722 5.2:+4485901 None:intergenic
GAAGGAAGTGAAGCAGAGGA+AGG 0.582452 5.2:-4488529 MS.gene09948:CDS
AGTGAAGCAGAGGAAGGCTG+AGG 0.583668 5.2:-4488523 MS.gene09948:CDS
TGAGGCGCAGAAGGAGAAGG+AGG 0.586945 5.2:-4488505 MS.gene09948:CDS
ATACAGCAGCACGGTTAGTG+AGG 0.589306 5.2:+4488391 None:intergenic
GAGAGCTGCTGAACCTGAGG+TGG 0.589705 5.2:-4488616 MS.gene09948:CDS
CAAATTAATAGAACCAGTCG+TGG 0.593038 5.2:-4485660 MS.gene09948:CDS
ACAAGGAAAGGAACTGCCAT+GGG 0.594542 5.2:-4486499 MS.gene09948:CDS
CTTTGGAAACATATCAGGAA+GGG 0.595284 5.2:-4485838 MS.gene09948:CDS
GACAAGGAAAGGAACTGCCA+TGG 0.596247 5.2:-4486500 MS.gene09948:CDS
GCCGGAACCGGAGCCAATGG+AGG 0.596557 5.2:-4488568 MS.gene09948:CDS
TTACTGCTGATCCTACAACT+AGG 0.598575 5.2:-4488824 MS.gene09948:CDS
AATGTAAAGATTGGAAGAGG+TGG 0.603059 5.2:-4488684 MS.gene09948:CDS
ACCAAGGGTTATACCCGGAA+GGG 0.604794 5.2:-4485896 MS.gene09948:CDS
TCGGCTAAACCTGATTTCAA+GGG 0.605511 5.2:+4488948 None:intergenic
GAGAAGCGTGAGCAGCGGAT+CGG 0.606528 5.2:+4489138 None:intergenic
GATGGCGGTTGCGAAATCGC+CGG 0.612453 5.2:+4489217 None:intergenic
CTTGATCCGACCTTCACCAA+GGG 0.614925 5.2:-4485911 MS.gene09948:CDS
CAACCAGGAATTGCTTGAAG+GGG 0.617312 5.2:-4485798 MS.gene09948:CDS
GTATAACCCTTGGTGAAGGT+CGG 0.620353 5.2:+4485905 None:intergenic
GCTTTGGAAACATATCAGGA+AGG 0.623211 5.2:-4485839 MS.gene09948:CDS
ACAGGAACATACCAAGAACC+CGG 0.627654 5.2:-4485339 MS.gene09948:CDS
TTGAGAAAGACCGAGATGAG+CGG 0.629255 5.2:+4489028 None:intergenic
TTAGCACCCGGCGCAGAACG+AGG 0.630271 5.2:+4488891 None:intergenic
TCACCAAACGGATTAGCACC+CGG 0.632019 5.2:+4488879 None:intergenic
ATCGGTTGGAATACAGGACG+TGG 0.632535 5.2:+4489156 None:intergenic
GCCGACGAAGCTAAAGCCAA+AGG 0.634082 5.2:-4489257 MS.gene09948:CDS
GGCGGTTGCGAAATCGCCGG+AGG 0.634986 5.2:+4489220 None:intergenic
CCTTCACCAAGGGTTATACC+CGG 0.641665 5.2:-4485901 MS.gene09948:CDS
TGATGGCATCTGAGAAGTGA+CGG 0.645347 5.2:+4489195 None:intergenic
GCTTGATCCGACCTTCACCA+AGG 0.647351 5.2:-4485912 MS.gene09948:CDS
GTTGGAATACAGGACGTGGT+TGG 0.650861 5.2:+4489160 None:intergenic
GGATCTTGTCCATCACACCC+GGG 0.653989 5.2:+4485321 None:intergenic
AGCAAACCTGTCTCATAACA+GGG 0.656878 5.2:+4485470 None:intergenic
GAAACATGATGCAAACAACC+AGG 0.657221 5.2:-4485813 MS.gene09948:CDS
ATCTGAGAAGTGACGGATGG+CGG 0.664337 5.2:+4489202 None:intergenic
ATATCCATTTCAGTTGTGTG+AGG 0.665497 5.2:-4485683 MS.gene09948:intron
CTGGAGAGAAGCGTGAGCAG+CGG 0.667719 5.2:+4489133 None:intergenic
GGCATCTGAGAAGTGACGGA+TGG 0.670607 5.2:+4489199 None:intergenic
TGATAGCAAGAGCTTTGACA+AGG 0.676277 5.2:-4486516 MS.gene09948:CDS
CAGGAACATACCAAGAACCC+GGG 0.680404 5.2:-4485338 MS.gene09948:CDS
TTTCCAAGTATACAGCAGCA+CGG 0.692729 5.2:+4488382 None:intergenic
CTGCATGTTACACAAAACTG+GGG 0.696032 5.2:-4485976 MS.gene09948:CDS
TGCATGTTACACAAAACTGG+GGG 0.723034 5.2:-4485975 MS.gene09948:CDS
ATATGCCATCCAGTTCGGAG+AGG 0.733223 5.2:-4488641 MS.gene09948:CDS
TTTCGAATAATGCTGAATCG+CGG 0.745844 5.2:+4488446 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAATTCAAATTATT+GGG + chr5.2:4485799-4485818 None:intergenic 10.0%
!! TATTATAATGATATAAGTAT+TGG - chr5.2:4486901-4486920 MS.gene09948:intron 10.0%
!! AAGTCTAATAAAGAAAATAA+TGG + chr5.2:4487276-4487295 None:intergenic 15.0%
!! CAAATACAAATTCAAATTAT+TGG + chr5.2:4485800-4485819 None:intergenic 15.0%
!! TAATTTGAATTTGTATTTGA+AGG - chr5.2:4485801-4485820 MS.gene09948:CDS 15.0%
!! TATTTATCAAAATACATTAC+AGG + chr5.2:4487919-4487938 None:intergenic 15.0%
!! TCATAAATATCTAATACTAT+TGG + chr5.2:4487663-4487682 None:intergenic 15.0%
!! TTTAATTGGAAATAGTTAAA+AGG + chr5.2:4486545-4486564 None:intergenic 15.0%
!!! AACAAAATAATGTATTTTCA+TGG + chr5.2:4486641-4486660 None:intergenic 15.0%
!!! ACATTATTTTGTTTTTTATG+TGG - chr5.2:4486648-4486667 MS.gene09948:intron 15.0%
!!! CATTATTTTGTTTTTTATGT+GGG - chr5.2:4486649-4486668 MS.gene09948:intron 15.0%
!!! CTGTATTTTGAATATTTTTT+AGG - chr5.2:4489007-4489026 MS.gene09948:CDS 15.0%
!! TAAATATCTAATACTATTGG+AGG + chr5.2:4487660-4487679 None:intergenic 20.0%
!! TAGTTATAGACTATAGTATA+TGG - chr5.2:4486373-4486392 MS.gene09948:CDS 20.0%
!! TTTCATGAAAGAATATGAAA+AGG - chr5.2:4488682-4488701 MS.gene09948:CDS 20.0%
!! TTTGGATAAAAGAAGTAAAT+GGG - chr5.2:4487107-4487126 MS.gene09948:intron 20.0%
!! TTTGTCAAAAACATATACAT+AGG + chr5.2:4486206-4486225 None:intergenic 20.0%
!!! ATTAAACATACTTTTGTTTG+TGG - chr5.2:4486779-4486798 MS.gene09948:intron 20.0%
!!! ATTATTACCTTAGGATTTTT+CGG + chr5.2:4488456-4488475 None:intergenic 20.0%
!!! GTTTTTTAAAGTTAAGTCAA+GGG - chr5.2:4487883-4487902 MS.gene09948:intron 20.0%
!!! TTAAACATACTTTTGTTTGT+GGG - chr5.2:4486780-4486799 MS.gene09948:intron 20.0%
!!! TTTGAATATTTTTTAGGCTA+AGG - chr5.2:4489013-4489032 MS.gene09948:CDS 20.0%
!!! TTTTGGATAAAAGAAGTAAA+TGG - chr5.2:4487106-4487125 MS.gene09948:intron 20.0%
! AAACAATAATGTGGAAATAG+AGG + chr5.2:4488309-4488328 None:intergenic 25.0%
! AATATTATTGGGGTTGTTAA+AGG + chr5.2:4487552-4487571 None:intergenic 25.0%
! AATTTAACACATTTCACCTA+TGG + chr5.2:4486448-4486467 None:intergenic 25.0%
! AGCAGTCTTGAAAATATTAT+TGG + chr5.2:4487564-4487583 None:intergenic 25.0%
! ATATTATTGGGGTTGTTAAA+GGG + chr5.2:4487551-4487570 None:intergenic 25.0%
! ATTAGGAAGAGAAAAATCTA+AGG - chr5.2:4487860-4487879 MS.gene09948:intron 25.0%
! ATTGAGTCAAAACAATAATG+TGG + chr5.2:4488318-4488337 None:intergenic 25.0%
! ATTTAACACATTTCACCTAT+GGG + chr5.2:4486447-4486466 None:intergenic 25.0%
! CAGTCTTGAAAATATTATTG+GGG + chr5.2:4487562-4487581 None:intergenic 25.0%
! GCAGTCTTGAAAATATTATT+GGG + chr5.2:4487563-4487582 None:intergenic 25.0%
! GGATCAAAATGAAAATCTTA+TGG + chr5.2:4487320-4487339 None:intergenic 25.0%
! GTAATAAGATGTGGTTATAA+TGG - chr5.2:4489130-4489149 MS.gene09948:CDS 25.0%
! GTATATGAACCAAATTGAAA+AGG - chr5.2:4486601-4486620 MS.gene09948:intron 25.0%
! TAATAATACTCTTTGCATTC+AGG - chr5.2:4488469-4488488 MS.gene09948:CDS 25.0%
! TATGGTTTGAGTGTTTAAAT+AGG - chr5.2:4487807-4487826 MS.gene09948:intron 25.0%
! TTAGGAAGAGAAAAATCTAA+GGG - chr5.2:4487861-4487880 MS.gene09948:intron 25.0%
! TTGAGTGTTTAAATAGGATT+AGG - chr5.2:4487813-4487832 MS.gene09948:intron 25.0%
! TTGCATAAAAGATTGTGATA+AGG - chr5.2:4487965-4487984 MS.gene09948:intron 25.0%
!! AACTTGGTCAAATTTTACTA+TGG - chr5.2:4487789-4487808 MS.gene09948:intron 25.0%
!! ACATAATAGCCTTTTCAATT+TGG + chr5.2:4486613-4486632 None:intergenic 25.0%
!! GTTTTGCTTAATGTAAAGAT+TGG - chr5.2:4485850-4485869 MS.gene09948:CDS 25.0%
!! TTAAGTTACCGCATATTTTA+GGG + chr5.2:4487193-4487212 None:intergenic 25.0%
!! TTATTACCTTAGGATTTTTC+GGG + chr5.2:4488455-4488474 None:intergenic 25.0%
!! TTGATAGTACATCAATTCAA+TGG + chr5.2:4486581-4486600 None:intergenic 25.0%
!!! GGTTTTTTAAAGTTAAGTCA+AGG - chr5.2:4487882-4487901 MS.gene09948:intron 25.0%
!!! TACTTTTTTCATAGGTGAAA+AGG - chr5.2:4486478-4486497 MS.gene09948:CDS 25.0%
!!! TAGACAGAACTATTGTTTTA+TGG - chr5.2:4486728-4486747 MS.gene09948:intron 25.0%
!!! TCAGAGTATTTTGCATATAA+TGG + chr5.2:4487614-4487633 None:intergenic 25.0%
!!! TTTAAGTTACCGCATATTTT+AGG + chr5.2:4487194-4487213 None:intergenic 25.0%
AATAATGAACCCTTGAAATC+AGG - chr5.2:4485586-4485605 MS.gene09948:intron 30.0%
AATTCAATGGAATTGTCATG+GGG + chr5.2:4486568-4486587 None:intergenic 30.0%
ACAACTGAAATGGATATACA+TGG + chr5.2:4488857-4488876 None:intergenic 30.0%
ACCTATGAAAAAAGTAGAAC+AGG + chr5.2:4486474-4486493 None:intergenic 30.0%
AGAATACTTCGATCCAAATT+TGG - chr5.2:4488202-4488221 MS.gene09948:intron 30.0%
AGATTTCCTAGTGTTTGAAT+AGG - chr5.2:4487837-4487856 MS.gene09948:intron 30.0%
AGGAAATGAAAATGGTAGAA+AGG + chr5.2:4486987-4487006 None:intergenic 30.0%
AGTATGTTTAATCACACACT+TGG + chr5.2:4486771-4486790 None:intergenic 30.0%
ATAACCACATCTTATTACTG+TGG + chr5.2:4489128-4489147 None:intergenic 30.0%
ATGCGTAATTAGCAAACAAT+AGG + chr5.2:4486280-4486299 None:intergenic 30.0%
ATGCTCTCAATTTATAGAGT+GGG - chr5.2:4486822-4486841 MS.gene09948:intron 30.0%
ATTCAGATAGCATAACCATA+AGG + chr5.2:4488499-4488518 None:intergenic 30.0%
CAATTCAATGGAATTGTCAT+GGG + chr5.2:4486569-4486588 None:intergenic 30.0%
CTTAATGTAAAGATTGGAAG+AGG - chr5.2:4485856-4485875 MS.gene09948:CDS 30.0%
GAAAGAATATGAAAAGGCTT+TGG - chr5.2:4488688-4488707 MS.gene09948:CDS 30.0%
GAAGAAAAATATGTCATGCA+AGG + chr5.2:4487158-4487177 None:intergenic 30.0%
GATGATGCAAGATATTCAAA+AGG - chr5.2:4485771-4485790 MS.gene09948:intron 30.0%
GATTTCAAGGGTTCATTATT+AGG + chr5.2:4485586-4485605 None:intergenic 30.0%
GTATGTTTAATCACACACTT+GGG + chr5.2:4486770-4486789 None:intergenic 30.0%
TAAAAGGGAGGAAATGAAAA+TGG + chr5.2:4486995-4487014 None:intergenic 30.0%
TAAGATGTGGTTATAATGGT+TGG - chr5.2:4489134-4489153 MS.gene09948:CDS 30.0%
TACTATAAGCCTGAAAGAAA+TGG + chr5.2:4488541-4488560 None:intergenic 30.0%
TCAATTCAATGGAATTGTCA+TGG + chr5.2:4486570-4486589 None:intergenic 30.0%
TCTTAGAAATTCTGTAATCC+TGG - chr5.2:4487499-4487518 MS.gene09948:intron 30.0%
TTTAACACATTTCACCTATG+GGG + chr5.2:4486446-4486465 None:intergenic 30.0%
! AAAGAGTTATGCAAGCTTTT+GGG - chr5.2:4485827-4485846 MS.gene09948:CDS 30.0%
! ATCTCTGAATGCAAAGATTT+TGG + chr5.2:4488958-4488977 None:intergenic 30.0%
! CCTTATTTGAGAGAATGTTT+GGG - chr5.2:4486853-4486872 MS.gene09948:intron 30.0%
! GAAGTATTAAACACATTGCA+GGG + chr5.2:4488801-4488820 None:intergenic 30.0%
! TTAGTCTAGTTTCATTGCTA+AGG - chr5.2:4486314-4486333 MS.gene09948:intron 30.0%
!! AACTATTGTTTTATGGAAGC+TGG - chr5.2:4486735-4486754 MS.gene09948:intron 30.0%
!! CAAGTATATTGATTTGTTCC+TGG - chr5.2:4486673-4486692 MS.gene09948:intron 30.0%
!! GCAAAGAGTATTATTACCTT+AGG + chr5.2:4488465-4488484 None:intergenic 30.0%
!! TTATTCGAAAGCTTTGGAAT+TGG - chr5.2:4486110-4486129 MS.gene09948:CDS 30.0%
!! TTGTTGTTCTAGTTCTTTCT+TGG + chr5.2:4488183-4488202 None:intergenic 30.0%
!! TTTTTGGTAAGTCTCAATGA+CGG + chr5.2:4488102-4488121 None:intergenic 30.0%
!!! TATTTTTTAGGCTAAGGCAA+TGG - chr5.2:4489019-4489038 MS.gene09948:CDS 30.0%
!!! TTTTTCTAGGAGAGTATTGA+GGG + chr5.2:4487341-4487360 None:intergenic 30.0%
AAAATATGTCATGCAAGGTG+AGG + chr5.2:4487153-4487172 None:intergenic 35.0%
AAACTCCCAATTAAAGCCTA+AGG + chr5.2:4487063-4487082 None:intergenic 35.0%
AACTCCCAATTAAAGCCTAA+GGG + chr5.2:4487062-4487081 None:intergenic 35.0%
AAGAAACCCGAAAAATCCTA+AGG - chr5.2:4488446-4488465 MS.gene09948:CDS 35.0%
AATGTAAAGATTGGAAGAGG+TGG - chr5.2:4485859-4485878 MS.gene09948:CDS 35.0%
AGCTTCATTGAGTTTCTTCA+GGG + chr5.2:4488153-4488172 None:intergenic 35.0%
ATAATGTGGAAATAGAGGCT+AGG + chr5.2:4488304-4488323 None:intergenic 35.0%
ATATCCATTTCAGTTGTGTG+AGG - chr5.2:4488860-4488879 MS.gene09948:CDS 35.0%
CAAATTAATAGAACCAGTCG+TGG - chr5.2:4488883-4488902 MS.gene09948:CDS 35.0%
CATTATACACAATGAAGCCA+AGG + chr5.2:4489103-4489122 None:intergenic 35.0%
CCCAAACATTCTCTCAAATA+AGG + chr5.2:4486856-4486875 None:intergenic 35.0%
CCTAATCCTATTCAAACACT+AGG + chr5.2:4487846-4487865 None:intergenic 35.0%
CCTAGTGTTTGAATAGGATT+AGG - chr5.2:4487843-4487862 MS.gene09948:intron 35.0%
CCTCATACTGAAAAGATTCA+AGG + chr5.2:4487944-4487963 None:intergenic 35.0%
CGGTAACTTAAAAATGCACT+GGG - chr5.2:4487202-4487221 MS.gene09948:intron 35.0%
CTGTTTCAGCTTACAAGAAA+GGG - chr5.2:4485548-4485567 MS.gene09948:intron 35.0%
GAATTGTCATGGGGTTTAAT+TGG + chr5.2:4486559-4486578 None:intergenic 35.0%
GACTGAAACCCTAAAATATG+CGG - chr5.2:4487182-4487201 MS.gene09948:intron 35.0%
GATGCTCTCAATTTATAGAG+TGG - chr5.2:4486821-4486840 MS.gene09948:intron 35.0%
GTGTAATGCTTAATAGCTTC+AGG + chr5.2:4488414-4488433 None:intergenic 35.0%
TAATGCTGCGTATAAGAAGA+AGG - chr5.2:4486065-4486084 MS.gene09948:intron 35.0%
TAGCATCCAAAACATAACAG+CGG - chr5.2:4487726-4487745 MS.gene09948:intron 35.0%
TATGAAAACCTTGTCTTGCA+GGG - chr5.2:4488361-4488380 MS.gene09948:intron 35.0%
TCAGCATTATTCGAAAGCTT+TGG - chr5.2:4486104-4486123 MS.gene09948:CDS 35.0%
TCGAATACTCCATTTCTTTC+AGG - chr5.2:4488529-4488548 MS.gene09948:CDS 35.0%
TGAAGATAAACCCTAGTTGT+AGG + chr5.2:4485733-4485752 None:intergenic 35.0%
TGATTTCCAGGATAATCCTA+AGG - chr5.2:4489177-4489196 MS.gene09948:CDS 35.0%
TGCATCATCTTGACAAAATC+AGG + chr5.2:4485760-4485779 None:intergenic 35.0%
TGCTCTCAATTTATAGAGTG+GGG - chr5.2:4486823-4486842 MS.gene09948:intron 35.0%
TGTATACTTGGAAATGGGAA+AGG - chr5.2:4486170-4486189 MS.gene09948:intron 35.0%
TTACTTCATCTGGACAATTC+CGG + chr5.2:4489263-4489282 None:intergenic 35.0%
TTCAAGACTGCTGAGAATTT+AGG - chr5.2:4487572-4487591 MS.gene09948:intron 35.0%
TTCGAGAGATTATGAGAGAA+GGG + chr5.2:4487035-4487054 None:intergenic 35.0%
TTTCGAATAATGCTGAATCG+CGG + chr5.2:4486100-4486119 None:intergenic 35.0%
! AACATGATTTGCAGCCAAAA+AGG + chr5.2:4488831-4488850 None:intergenic 35.0%
! AAGAGTTATGCAAGCTTTTG+GGG - chr5.2:4485828-4485847 MS.gene09948:CDS 35.0%
! AAGCTTGTTTCAGTGTTTGA+TGG - chr5.2:4487760-4487779 MS.gene09948:intron 35.0%
! ACAAAACCGCTGTTATGTTT+TGG + chr5.2:4487735-4487754 None:intergenic 35.0%
! ACATGATTTGCAGCCAAAAA+GGG + chr5.2:4488830-4488849 None:intergenic 35.0%
! ATACTTCCAGTTTCCCTTTT+TGG - chr5.2:4488814-4488833 MS.gene09948:CDS 35.0%
! ATGGAGTATTCGAACATGTT+AGG + chr5.2:4488522-4488541 None:intergenic 35.0%
! ATTAACTGCCCATTTGAGTT+AGG - chr5.2:4486953-4486972 MS.gene09948:intron 35.0%
! CAAAGAGTTATGCAAGCTTT+TGG - chr5.2:4485826-4485845 MS.gene09948:CDS 35.0%
! CCTTGAATCTTTTCAGTATG+AGG - chr5.2:4487941-4487960 MS.gene09948:intron 35.0%
! CTTTGGAAACATATCAGGAA+GGG - chr5.2:4488705-4488724 MS.gene09948:CDS 35.0%
! GGCTTTAATTGGGAGTTTAT+AGG - chr5.2:4487065-4487084 MS.gene09948:intron 35.0%
! TGTTTGATGGTTACAGAACT+TGG - chr5.2:4487773-4487792 MS.gene09948:intron 35.0%
! TTAAAGCGTCAGTGTAATTC+TGG + chr5.2:4485432-4485451 None:intergenic 35.0%
! TTAACTGCCCATTTGAGTTA+GGG - chr5.2:4486954-4486973 MS.gene09948:intron 35.0%
! TTCGAAGGTACATATCATAG+TGG - chr5.2:4488768-4488787 MS.gene09948:CDS 35.0%
! TTTTGGTAAGTCTCAATGAC+GGG + chr5.2:4488101-4488120 None:intergenic 35.0%
!! AAAGGCTTTGGAAACATATC+AGG - chr5.2:4488700-4488719 MS.gene09948:CDS 35.0%
!! AAGAGAAGGCTTTGGATAAA+AGG + chr5.2:4487011-4487030 None:intergenic 35.0%
!! AGAGAAGGCTTTGGATAAAA+GGG + chr5.2:4487010-4487029 None:intergenic 35.0%
!! AGGTGAAAAGGTGTTTAACT+TGG - chr5.2:4486490-4486509 MS.gene09948:CDS 35.0%
!! ATTGATTTGTTCCTGGTACT+TGG - chr5.2:4486680-4486699 MS.gene09948:intron 35.0%
!! GAGAAAAAGGTACTATCTCT+TGG - chr5.2:4488237-4488256 MS.gene09948:intron 35.0%
!! GCCTTATTTGAGAGAATGTT+TGG - chr5.2:4486852-4486871 MS.gene09948:intron 35.0%
!! GGAAGTATTAAACACATTGC+AGG + chr5.2:4488802-4488821 None:intergenic 35.0%
!! GTAACCTTAAGGCTTTGAAT+GGG + chr5.2:4487434-4487453 None:intergenic 35.0%
!! TGATTTTCCAGCAGAGTATT+TGG - chr5.2:4487631-4487650 MS.gene09948:intron 35.0%
!!! CTTTTTCTAGGAGAGTATTG+AGG + chr5.2:4487342-4487361 None:intergenic 35.0%
!!! GAATGAAGGAGAGAGTTTTT+TGG - chr5.2:4487089-4487108 MS.gene09948:intron 35.0%
!!! GCCTGTTCTACTTTTTTCAT+AGG - chr5.2:4486470-4486489 MS.gene09948:CDS 35.0%
!!! GTTTTTTAGTTTGACCCCAT+AGG - chr5.2:4486429-4486448 MS.gene09948:CDS 35.0%
AAAGACAACCTTCAGTACCA+AGG + chr5.2:4487456-4487475 None:intergenic 40.0%
AACAACCAGGAATTGCTTGA+AGG - chr5.2:4488743-4488762 MS.gene09948:CDS 40.0%
AAGCAAACCTGTCTCATAAC+AGG + chr5.2:4489077-4489096 None:intergenic 40.0%
ACAACCAGGAATTGCTTGAA+GGG - chr5.2:4488744-4488763 MS.gene09948:CDS 40.0%
ACTTAAAAATGCACTGGGAG+AGG - chr5.2:4487207-4487226 MS.gene09948:intron 40.0%
AGCAAACCTGTCTCATAACA+GGG + chr5.2:4489076-4489095 None:intergenic 40.0%
AGCTGCATGTTACACAAAAC+TGG - chr5.2:4488565-4488584 MS.gene09948:CDS 40.0%
ATAGTCCCCCTAACTCAAAT+GGG + chr5.2:4486964-4486983 None:intergenic 40.0%
ATCCTGGAATCTAATCACAC+TGG - chr5.2:4487515-4487534 MS.gene09948:intron 40.0%
ATCGGCTAAACCTGATTTCA+AGG + chr5.2:4485599-4485618 None:intergenic 40.0%
CAGCTTCATTGAGTTTCTTC+AGG + chr5.2:4488154-4488173 None:intergenic 40.0%
CTGCATGTTACACAAAACTG+GGG - chr5.2:4488567-4488586 MS.gene09948:CDS 40.0%
GAAACATGATGCAAACAACC+AGG - chr5.2:4488730-4488749 MS.gene09948:CDS 40.0%
GAAACTCAATGAAGCTGAGA+AGG - chr5.2:4488157-4488176 MS.gene09948:intron 40.0%
GCGGTAACTTAAAAATGCAC+TGG - chr5.2:4487201-4487220 MS.gene09948:intron 40.0%
GCTGCATGTTACACAAAACT+GGG - chr5.2:4488566-4488585 MS.gene09948:CDS 40.0%
GCTGCTGTATACTTGGAAAT+GGG - chr5.2:4486165-4486184 MS.gene09948:intron 40.0%
GGGAGTTTATAGGAGAATGA+AGG - chr5.2:4487075-4487094 MS.gene09948:intron 40.0%
GTATGAAAACCTTGTCTTGC+AGG - chr5.2:4488360-4488379 MS.gene09948:intron 40.0%
GTTCGAGAGATTATGAGAGA+AGG + chr5.2:4487036-4487055 None:intergenic 40.0%
TACTGCTGATCCTACAACTA+GGG - chr5.2:4485720-4485739 MS.gene09948:intron 40.0%
TATTCATTCCCTGCAAGACA+AGG + chr5.2:4488372-4488391 None:intergenic 40.0%
TCAAAGCCTTAAGGTTACCT+TGG - chr5.2:4487436-4487455 MS.gene09948:intron 40.0%
TCAGTACCAAGGTAACCTTA+AGG + chr5.2:4487445-4487464 None:intergenic 40.0%
TCGAGAGATTATGAGAGAAG+GGG + chr5.2:4487034-4487053 None:intergenic 40.0%
TCGGCTAAACCTGATTTCAA+GGG + chr5.2:4485598-4485617 None:intergenic 40.0%
TCTGCATCCTTTAAACCTTC+AGG + chr5.2:4488599-4488618 None:intergenic 40.0%
TGCATGTTACACAAAACTGG+GGG - chr5.2:4488568-4488587 MS.gene09948:CDS 40.0%
TGCTGCTGTATACTTGGAAA+TGG - chr5.2:4486164-4486183 MS.gene09948:CDS 40.0%
TGTAACTCCTGAAGAGTTGA+AGG - chr5.2:4488909-4488928 MS.gene09948:CDS 40.0%
TGTGATAAGGCTGTTGAAAG+AGG - chr5.2:4487978-4487997 MS.gene09948:intron 40.0%
TGTGCCACAGTAATAAGATG+TGG - chr5.2:4489121-4489140 MS.gene09948:CDS 40.0%
TTACTGCTGATCCTACAACT+AGG - chr5.2:4485719-4485738 MS.gene09948:intron 40.0%
TTTCCAAGTATACAGCAGCA+CGG + chr5.2:4486164-4486183 None:intergenic 40.0%
TTTGCCTCACACAACTGAAA+TGG + chr5.2:4488867-4488886 None:intergenic 40.0%
! ACAGACCCTTAGGCTTTAAT+TGG - chr5.2:4487054-4487073 MS.gene09948:intron 40.0%
! ACTCAAACCTGATTGGTCAA+AGG - chr5.2:4485474-4485493 MS.gene09948:intron 40.0%
! CAGACCCTTAGGCTTTAATT+GGG - chr5.2:4487055-4487074 MS.gene09948:intron 40.0%
! CTCAAACCTGATTGGTCAAA+GGG - chr5.2:4485475-4485494 MS.gene09948:intron 40.0%
! GCTGTTTCAGCTTACAAGAA+AGG - chr5.2:4485547-4485566 MS.gene09948:intron 40.0%
! TAACTGCCCATTTGAGTTAG+GGG - chr5.2:4486955-4486974 MS.gene09948:intron 40.0%
! TAAGGTTACCTTGGTACTGA+AGG - chr5.2:4487445-4487464 MS.gene09948:intron 40.0%
! TGAAGGATGTTCTGAATCTC+TGG + chr5.2:4489050-4489069 None:intergenic 40.0%
! TGATAGCAAGAGCTTTGACA+AGG - chr5.2:4488027-4488046 MS.gene09948:intron 40.0%
! TTCGACGGTTTTCTTTGCAT+CGG + chr5.2:4485455-4485474 None:intergenic 40.0%
! TTGGTACTGAAGGTTGTCTT+TGG - chr5.2:4487455-4487474 MS.gene09948:intron 40.0%
!! AGCTTTGGAATTGGATGATG+AGG - chr5.2:4486119-4486138 MS.gene09948:CDS 40.0%
!! CCAGAAAAAGCATCACCAAA+CGG + chr5.2:4485679-4485698 None:intergenic 40.0%
!! GCTTTGGAAACATATCAGGA+AGG - chr5.2:4488704-4488723 MS.gene09948:CDS 40.0%
!! GGTAACCTTAAGGCTTTGAA+TGG + chr5.2:4487435-4487454 None:intergenic 40.0%
!! TAATGGTTGGCTTTGTATGC+AGG - chr5.2:4489147-4489166 MS.gene09948:CDS 40.0%
!! TTGGCTTTGTATGCAGGTAT+TGG - chr5.2:4489153-4489172 MS.gene09948:CDS 40.0%
!!! AGACAGGTTTGCTTTTTCCT+TGG - chr5.2:4489083-4489102 MS.gene09948:CDS 40.0%
!!! GACTTTGAAGGGTGTTTTAG+AGG - chr5.2:4487229-4487248 MS.gene09948:intron 40.0%
!!! GGAGCATCTTCACTTTTTCT+AGG + chr5.2:4487354-4487373 None:intergenic 40.0%
AATCTCTCGAACAGACCCTT+AGG - chr5.2:4487044-4487063 MS.gene09948:intron 45.0%
AATTGCTTGAAGGGGTTCGA+AGG - chr5.2:4488753-4488772 MS.gene09948:CDS 45.0%
ACAAGGAAAGGAACTGCCAT+GGG - chr5.2:4488044-4488063 MS.gene09948:intron 45.0%
ACAGGAACATACCAAGAACC+CGG - chr5.2:4489204-4489223 MS.gene09948:CDS 45.0%
ACTGTGCTATCTCGATGCAA+AGG - chr5.2:4486400-4486419 MS.gene09948:CDS 45.0%
AGGAACTGCCATGGGTAAAA+CGG - chr5.2:4488052-4488071 MS.gene09948:intron 45.0%
ATATGTCATGCAAGGTGAGG+AGG + chr5.2:4487150-4487169 None:intergenic 45.0%
ATCCAAAAGCTGATCAGTGC+CGG - chr5.2:4489241-4489260 MS.gene09948:CDS 45.0%
ATCTCTTGGTCTGATCTTCC+AGG - chr5.2:4488251-4488270 MS.gene09948:intron 45.0%
CAACCAGGAATTGCTTGAAG+GGG - chr5.2:4488745-4488764 MS.gene09948:CDS 45.0%
CGATCCAAATTTGGCTGATG+AGG - chr5.2:4488211-4488230 MS.gene09948:intron 45.0%
CTCCAGTGTGATTAGATTCC+AGG + chr5.2:4487520-4487539 None:intergenic 45.0%
CTCTCCTCATCAGCCAAATT+TGG + chr5.2:4488218-4488237 None:intergenic 45.0%
CTGTAACCCTTTGACCAATC+AGG + chr5.2:4485484-4485503 None:intergenic 45.0%
CTGTGCTATCTCGATGCAAA+GGG - chr5.2:4486401-4486420 MS.gene09948:CDS 45.0%
GATAGTCCCCCTAACTCAAA+TGG + chr5.2:4486965-4486984 None:intergenic 45.0%
GCTGATGAGGAGAGAGAAAA+AGG - chr5.2:4488224-4488243 MS.gene09948:intron 45.0%
GGATGCTAAGTGCAATAAGC+AGG + chr5.2:4487714-4487733 None:intergenic 45.0%
GGCAATGCCTGAAGGTTTAA+AGG - chr5.2:4488589-4488608 MS.gene09948:CDS 45.0%
GTATAACCCTTGGTGAAGGT+CGG + chr5.2:4488641-4488660 None:intergenic 45.0%
GTCTCATAACAGGGTCTTGA+AGG + chr5.2:4489067-4489086 None:intergenic 45.0%
GTCTCCCATTCAAAGCCTTA+AGG - chr5.2:4487427-4487446 MS.gene09948:intron 45.0%
TATCACCACTTCCAAGTACC+AGG + chr5.2:4486694-4486713 None:intergenic 45.0%
TATGAGAGAAGGGGAAGAGA+AGG + chr5.2:4487025-4487044 None:intergenic 45.0%
TCAAGACCCTGTTATGAGAC+AGG - chr5.2:4489067-4489086 MS.gene09948:CDS 45.0%
TGAAGAGTTGAAGGAGAGAC+AGG - chr5.2:4488918-4488937 MS.gene09948:CDS 45.0%
TGATGGCATCTGAGAAGTGA+CGG + chr5.2:4485351-4485370 None:intergenic 45.0%
TGGAAATAGAGGCTAGGAGA+AGG + chr5.2:4488298-4488317 None:intergenic 45.0%
TGTCTCTCCTTCAACTCTTC+AGG + chr5.2:4488919-4488938 None:intergenic 45.0%
TGTGCTATCTCGATGCAAAG+GGG - chr5.2:4486402-4486421 MS.gene09948:CDS 45.0%
TTGAGAAAGACCGAGATGAG+CGG + chr5.2:4485518-4485537 None:intergenic 45.0%
TTGCAGCCAAAAAGGGAAAC+TGG + chr5.2:4488823-4488842 None:intergenic 45.0%
TTGCATTCAGGTCGTCCTTA+TGG - chr5.2:4488481-4488500 MS.gene09948:CDS 45.0%
TTGTTCCTGGTACTTGGAAG+TGG - chr5.2:4486686-4486705 MS.gene09948:intron 45.0%
! AACTGCCCATTTGAGTTAGG+GGG - chr5.2:4486956-4486975 MS.gene09948:intron 45.0%
! CCAATCAGGTTTGAGTTCGA+CGG + chr5.2:4485470-4485489 None:intergenic 45.0%
! GCAAGAGCTTTGACAAGGAA+AGG - chr5.2:4488032-4488051 MS.gene09948:intron 45.0%
! TAACCGTGCTGCTGTATACT+TGG - chr5.2:4486158-4486177 MS.gene09948:CDS 45.0%
! TGAGTTTCTTCAGGGTGTCT+GGG + chr5.2:4488145-4488164 None:intergenic 45.0%
! TTGAGTTTCTTCAGGGTGTC+TGG + chr5.2:4488146-4488165 None:intergenic 45.0%
! TTTTTCTGGACCGGAGATGT+GGG - chr5.2:4485690-4485709 MS.gene09948:intron 45.0%
!! GAAGGCTTTGGATAAAAGGG+AGG + chr5.2:4487007-4487026 None:intergenic 45.0%
!! GCAGGTATTGGTTGATTTCC+AGG - chr5.2:4489165-4489184 MS.gene09948:CDS 45.0%
!! TAAGGCTTTGAATGGGAGAC+TGG + chr5.2:4487427-4487446 None:intergenic 45.0%
!!! CCGTTTGGTGATGCTTTTTC+TGG - chr5.2:4485676-4485695 MS.gene09948:intron 45.0%
!!! GCATTTTGCCGTTTTACCCA+TGG + chr5.2:4488063-4488082 None:intergenic 45.0%
!!! TGGTGATGCTTTTTCTGGAC+CGG - chr5.2:4485681-4485700 MS.gene09948:intron 45.0%
AAAACTGAACCGCACCCTTC+CGG + chr5.2:4488664-4488683 None:intergenic 50.0%
ACCAAGGGTTATACCCGGAA+GGG - chr5.2:4488647-4488666 MS.gene09948:CDS 50.0%
AGAAGGGGAAGAGAAGGCTT+TGG + chr5.2:4487019-4487038 None:intergenic 50.0%
AGGAGAAGGAAGTGAAGCAG+AGG - chr5.2:4486010-4486029 MS.gene09948:intron 50.0%
AGGAGTTACATCTCCACGAC+TGG + chr5.2:4488899-4488918 None:intergenic 50.0%
ATACAGCAGCACGGTTAGTG+AGG + chr5.2:4486155-4486174 None:intergenic 50.0%
ATATGCCATCCAGTTCGGAG+AGG - chr5.2:4485902-4485921 MS.gene09948:CDS 50.0%
ATCGGTTGGAATACAGGACG+TGG + chr5.2:4485390-4485409 None:intergenic 50.0%
CACTGGGAGAGGACTTTGAA+GGG - chr5.2:4487218-4487237 MS.gene09948:intron 50.0%
CAGGAACATACCAAGAACCC+GGG - chr5.2:4489205-4489224 MS.gene09948:CDS 50.0%
CCGTCGAACTCAAACCTGAT+TGG - chr5.2:4485467-4485486 MS.gene09948:intron 50.0%
CCTAGAAAAATTCCCAGCCG+CGG + chr5.2:4485632-4485651 None:intergenic 50.0%
CCTTCACCAAGGGTTATACC+CGG - chr5.2:4488642-4488661 MS.gene09948:CDS 50.0%
CTTGATCCGACCTTCACCAA+GGG - chr5.2:4488632-4488651 MS.gene09948:CDS 50.0%
CTTGCAGGAAATGAAGAGCC+TGG + chr5.2:4488272-4488291 None:intergenic 50.0%
GAACCCCTTCAAGCAATTCC+TGG + chr5.2:4488751-4488770 None:intergenic 50.0%
GAAGGAAGTGAAGCAGAGGA+AGG - chr5.2:4486014-4486033 MS.gene09948:intron 50.0%
GAATACAGGACGTGGTTGGT+GGG + chr5.2:4485382-4485401 None:intergenic 50.0%
GACAAGGAAAGGAACTGCCA+TGG - chr5.2:4488043-4488062 MS.gene09948:intron 50.0%
GAGGATGCCAAATACTCTGC+TGG + chr5.2:4487641-4487660 None:intergenic 50.0%
GCCTGATATGCCATCCAGTT+CGG - chr5.2:4485897-4485916 MS.gene09948:CDS 50.0%
GGATAATCCTAAGGCTGCAC+AGG - chr5.2:4489186-4489205 MS.gene09948:CDS 50.0%
GTAAGTTTCGCCCACATCTC+CGG + chr5.2:4485703-4485722 None:intergenic 50.0%
GTATGTTCCTGTGCAGCCTT+AGG + chr5.2:4489196-4489215 None:intergenic 50.0%
GTGCAGCCTTAGGATTATCC+TGG + chr5.2:4489186-4489205 None:intergenic 50.0%
GTTGGAATACAGGACGTGGT+TGG + chr5.2:4485386-4485405 None:intergenic 50.0%
TCAAAGGGTTACAGCCGTCT+CGG - chr5.2:4485490-4485509 MS.gene09948:CDS 50.0%
TCCGAACTGGATGGCATATC+AGG + chr5.2:4485901-4485920 None:intergenic 50.0%
TGAATGGGAGACTGGAGAGA+GGG + chr5.2:4487419-4487438 None:intergenic 50.0%
TGGATCTTGTCCATCACACC+CGG + chr5.2:4489226-4489245 None:intergenic 50.0%
TTGAATGGGAGACTGGAGAG+AGG + chr5.2:4487420-4487439 None:intergenic 50.0%
! AATACAGGACGTGGTTGGTG+GGG + chr5.2:4485381-4485400 None:intergenic 50.0%
! CTTTTTCTGGACCGGAGATG+TGG - chr5.2:4485689-4485708 MS.gene09948:intron 50.0%
! GGTGCTCTGTAAGCGCTTTT+TGG + chr5.2:4488118-4488137 None:intergenic 50.0%
! GTTGGTGGGGGAAAGATTGA+TGG + chr5.2:4485368-4485387 None:intergenic 50.0%
! TCTTCAGGGTGTCTGGGTTA+CGG + chr5.2:4488139-4488158 None:intergenic 50.0%
! TGGAAGAGGTGGTGATGATG+TGG - chr5.2:4485870-4485889 MS.gene09948:CDS 50.0%
!! ATCTGAGAAGTGACGGATGG+CGG + chr5.2:4485344-4485363 None:intergenic 50.0%
!! GCCTTTGGCTTTAGCTTCGT+CGG + chr5.2:4485290-4485309 None:intergenic 50.0%
!! TCACCAAACGGATTAGCACC+CGG + chr5.2:4485667-4485686 None:intergenic 50.0%
!!! TTCCGGCACTGATCAGCTTT+TGG + chr5.2:4489246-4489265 None:intergenic 50.0%
AAACTGAACCGCACCCTTCC+GGG + chr5.2:4488663-4488682 None:intergenic 55.0%
AAACTGGGGGCAATGCCTGA+AGG - chr5.2:4488581-4488600 MS.gene09948:CDS 55.0%
AATGGAGGAGGTGGCTGATG+AGG - chr5.2:4485990-4486009 MS.gene09948:CDS 55.0%
ACCCTTCCGGGTATAACCCT+TGG + chr5.2:4488651-4488670 None:intergenic 55.0%
AGCAGCACGGTTAGTGAGGA+AGG + chr5.2:4486151-4486170 None:intergenic 55.0%
AGCCGATGCTCAAAAAGCCG+CGG - chr5.2:4485612-4485631 MS.gene09948:intron 55.0%
AGCTCTCTTCCTCTCCGAAC+TGG + chr5.2:4485914-4485933 None:intergenic 55.0%
AGTGAAGCAGAGGAAGGCTG+AGG - chr5.2:4486020-4486039 MS.gene09948:intron 55.0%
ATGCTCAAAAAGCCGCGGCT+GGG - chr5.2:4485617-4485636 MS.gene09948:intron 55.0%
CACCAAGGGTTATACCCGGA+AGG - chr5.2:4488646-4488665 MS.gene09948:CDS 55.0%
CAGCGGATCGGTTGGAATAC+AGG + chr5.2:4485396-4485415 None:intergenic 55.0%
CCGGGTATAACCCTTGGTGA+AGG + chr5.2:4488645-4488664 None:intergenic 55.0%
CTCTTCCTCTCCGAACTGGA+TGG + chr5.2:4485910-4485929 None:intergenic 55.0%
GAAGAGAGCTGCTGAACCTG+AGG - chr5.2:4485924-4485943 MS.gene09948:CDS 55.0%
GCACTGGGAGAGGACTTTGA+AGG - chr5.2:4487217-4487236 MS.gene09948:intron 55.0%
GCCGACGAAGCTAAAGCCAA+AGG - chr5.2:4485286-4485305 MS.gene09948:CDS 55.0%
GCTAGGAGAAGGATGCTTGC+AGG + chr5.2:4488287-4488306 None:intergenic 55.0%
GCTTGATCCGACCTTCACCA+AGG - chr5.2:4488631-4488650 MS.gene09948:CDS 55.0%
GGAATACAGGACGTGGTTGG+TGG + chr5.2:4485383-4485402 None:intergenic 55.0%
GGAGAATGCAGCGTTGCCTT+TGG + chr5.2:4485305-4485324 None:intergenic 55.0%
GGATCTTGTCCATCACACCC+GGG + chr5.2:4489225-4489244 None:intergenic 55.0%
TACCAAGAACCCGGGTGTGA+TGG - chr5.2:4489213-4489232 MS.gene09948:CDS 55.0%
TCATCAGCCACCTCCTCCAT+TGG + chr5.2:4485991-4486010 None:intergenic 55.0%
TGAACCTGAGGTGGCAAAGC+AGG - chr5.2:4485936-4485955 MS.gene09948:CDS 55.0%
! CCGCGGCTGGGAATTTTTCT+AGG - chr5.2:4485629-4485648 MS.gene09948:CDS 55.0%
! GGCATCTGAGAAGTGACGGA+TGG + chr5.2:4485347-4485366 None:intergenic 55.0%
!! AGCCGCGGCTTTTTGAGCAT+CGG + chr5.2:4485617-4485636 None:intergenic 55.0%
!! ATACAGGACGTGGTTGGTGG+GGG + chr5.2:4485380-4485399 None:intergenic 55.0%
ACCTGAGGTGGCAAAGCAGG+CGG - chr5.2:4485939-4485958 MS.gene09948:CDS 60.0%
ATGGGAGACTGGAGAGAGGG+AGG + chr5.2:4487416-4487435 None:intergenic 60.0%
GAGAGCTGCTGAACCTGAGG+TGG - chr5.2:4485927-4485946 MS.gene09948:CDS 60.0%
GATGCTCAAAAAGCCGCGGC+TGG - chr5.2:4485616-4485635 MS.gene09948:intron 60.0%
GGAGGTGGCTGATGAGGAGA+AGG - chr5.2:4485996-4486015 MS.gene09948:intron 60.0%
GGCAACGCTGCATTCTCCTC+CGG - chr5.2:4485307-4485326 MS.gene09948:CDS 60.0%
GGGCGAAGGGGGTAGAGAAT+AGG + chr5.2:4487375-4487394 None:intergenic 60.0%
GGGTTATACCCGGAAGGGTG+CGG - chr5.2:4488652-4488671 MS.gene09948:CDS 60.0%
GTCCATCACACCCGGGTTCT+TGG + chr5.2:4489218-4489237 None:intergenic 60.0%
TGAGGCGCAGAAGGAGAAGG+AGG - chr5.2:4486038-4486057 MS.gene09948:intron 60.0%
TGGGAGACTGGAGAGAGGGA+GGG + chr5.2:4487415-4487434 None:intergenic 60.0%
TTCTAGGCCTCGTTCTGCGC+CGG - chr5.2:4485645-4485664 MS.gene09948:CDS 60.0%
! CTGGAGAGAAGCGTGAGCAG+CGG + chr5.2:4485413-4485432 None:intergenic 60.0%
! GAGAAGCGTGAGCAGCGGAT+CGG + chr5.2:4485408-4485427 None:intergenic 60.0%
! GATGGCGGTTGCGAAATCGC+CGG + chr5.2:4485329-4485348 None:intergenic 60.0%
!! TCCTCCATTGGCTCCGGTTC+CGG + chr5.2:4485979-4485998 None:intergenic 60.0%
ACCGGAGCCAATGGAGGAGG+TGG - chr5.2:4485981-4486000 MS.gene09948:CDS 65.0%
AGCGTGAGCAGCGGATCGGT+TGG + chr5.2:4485404-4485423 None:intergenic 65.0%
AGGGGACGGAGGAGGGCTTT+GGG + chr5.2:4487396-4487415 None:intergenic 65.0%
GACTGGAGAGAGGGAGGGGA+CGG + chr5.2:4487410-4487429 None:intergenic 65.0%
GAGGAAGGCTGAGGCGCAGA+AGG - chr5.2:4486029-4486048 MS.gene09948:intron 65.0%
GCGCAGAAGGAGAAGGAGGC+TGG - chr5.2:4486042-4486061 MS.gene09948:intron 65.0%
GCGCCGGGTGCTAATCCGTT+TGG - chr5.2:4485661-4485680 MS.gene09948:CDS 65.0%
GGAACCGGAGCCAATGGAGG+AGG - chr5.2:4485978-4485997 MS.gene09948:CDS 65.0%
GGCTGAGGCGCAGAAGGAGA+AGG - chr5.2:4486035-4486054 MS.gene09948:intron 65.0%
GGGAGACTGGAGAGAGGGAG+GGG + chr5.2:4487414-4487433 None:intergenic 65.0%
GGTTGAGCCTGAGCCGGAAC+CGG - chr5.2:4485963-4485982 MS.gene09948:CDS 65.0%
TCCGCCTGCTTTGCCACCTC+AGG + chr5.2:4485943-4485962 None:intergenic 65.0%
TCTAGGCCTCGTTCTGCGCC+GGG - chr5.2:4485646-4485665 MS.gene09948:CDS 65.0%
TGAGCCGGAACCGGAGCCAA+TGG - chr5.2:4485972-4485991 MS.gene09948:CDS 65.0%
TGAGGTGGCAAAGCAGGCGG+AGG - chr5.2:4485942-4485961 MS.gene09948:CDS 65.0%
TTAGCACCCGGCGCAGAACG+AGG + chr5.2:4485655-4485674 None:intergenic 65.0%
! ATTGGCTCCGGTTCCGGCTC+AGG + chr5.2:4485973-4485992 None:intergenic 65.0%
! CGAGATGAGCGGCACCGAGA+CGG + chr5.2:4485507-4485526 None:intergenic 65.0%
!! AGGAGGGCTTTGGGGCGAAG+GGG + chr5.2:4487387-4487406 None:intergenic 65.0%
!! CGTCTCGGTGCCGCTCATCT+CGG - chr5.2:4485505-4485524 MS.gene09948:CDS 65.0%
!! GAGGAGGGCTTTGGGGCGAA+GGG + chr5.2:4487388-4487407 None:intergenic 65.0%
!! GCCACCTCCTCCATTGGCTC+CGG + chr5.2:4485985-4486004 None:intergenic 65.0%
AGAGAGGGAGGGGACGGAGG+AGG + chr5.2:4487404-4487423 None:intergenic 70.0%
GAGAGGGAGGGGACGGAGGA+GGG + chr5.2:4487403-4487422 None:intergenic 70.0%
GAGGGGACGGAGGAGGGCTT+TGG + chr5.2:4487397-4487416 None:intergenic 70.0%
GCCGGAACCGGAGCCAATGG+AGG - chr5.2:4485975-4485994 MS.gene09948:CDS 70.0%
GGCGGAGGTTGAGCCTGAGC+CGG - chr5.2:4485957-4485976 MS.gene09948:CDS 70.0%
GGCGGTTGCGAAATCGCCGG+AGG + chr5.2:4485326-4485345 None:intergenic 70.0%
GGGGACGGAGGAGGGCTTTG+GGG + chr5.2:4487395-4487414 None:intergenic 70.0%
TGGAGAGAGGGAGGGGACGG+AGG + chr5.2:4487407-4487426 None:intergenic 70.0%
!! GGAGGAGGGCTTTGGGGCGA+AGG + chr5.2:4487389-4487408 None:intergenic 70.0%
!! GGAGGGCTTTGGGGCGAAGG+GGG + chr5.2:4487386-4487405 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 4485283 4489282 4485283 ID=MS.gene09948
chr5.2 mRNA 4485283 4489282 4485283 ID=MS.gene09948.t1;Parent=MS.gene09948
chr5.2 exon 4488374 4489282 4488374 ID=MS.gene09948.t1.exon1;Parent=MS.gene09948.t1
chr5.2 CDS 4488374 4489282 4488374 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
chr5.2 exon 4486320 4486608 4486320 ID=MS.gene09948.t1.exon2;Parent=MS.gene09948.t1
chr5.2 CDS 4486320 4486608 4486320 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
chr5.2 exon 4486098 4486183 4486098 ID=MS.gene09948.t1.exon3;Parent=MS.gene09948.t1
chr5.2 CDS 4486098 4486183 4486098 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
chr5.2 exon 4485791 4486014 4485791 ID=MS.gene09948.t1.exon4;Parent=MS.gene09948.t1
chr5.2 CDS 4485791 4486014 4485791 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
chr5.2 exon 4485626 4485692 4485626 ID=MS.gene09948.t1.exon5;Parent=MS.gene09948.t1
chr5.2 CDS 4485626 4485692 4485626 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
chr5.2 exon 4485477 4485536 4485477 ID=MS.gene09948.t1.exon6;Parent=MS.gene09948.t1
chr5.2 CDS 4485477 4485536 4485477 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
chr5.2 exon 4485283 4485396 4485283 ID=MS.gene09948.t1.exon7;Parent=MS.gene09948.t1
chr5.2 CDS 4485283 4485396 4485283 ID=cds.MS.gene09948.t1;Parent=MS.gene09948.t1
Gene Sequence

>MS.gene09948

ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCTGCATTCTCCTCCGGCGATTTCGCAACCGCCATCCGTCACTTCTCAGATGCCATCAATCTTTCCCCCACCAACCACGTCCTGTATTCCAACCGATCCGCTGCTCACGCTTCTCTCCAGAATTACACTGACGCTTTAACCGATGCAAAGAAAACCGTCGAACTCAAACCTGATTGGTCAAAGGGTTACAGCCGTCTCGGTGCCGCTCATCTCGGTCTTTCTCAATACGACGAAGCTGTTTCAGCTTACAAGAAAGGGTTAGAAATTGATCCTAATAATGAACCCTTGAAATCAGGTTTAGCCGATGCTCAAAAAGCCGCGGCTGGGAATTTTTCTAGGCCTCGTTCTGCGCCGGGTGCTAATCCGTTTGGTGATGCTTTTTCTGGACCGGAGATGTGGGCGAAACTTACTGCTGATCCTACAACTAGGGTTTATCTTCAGCAACCTGATTTTGTCAAGATGATGCAAGATATTCAAAAGGATCCCAATAATTTGAATTTGTATTTGAAGGATCAAAGAGTTATGCAAGCTTTTGGGGTTTTGCTTAATGTAAAGATTGGAAGAGGTGGTGATGATGTGGATATGCCTGATATGCCATCCAGTTCGGAGAGGAAGAGAGCTGCTGAACCTGAGGTGGCAAAGCAGGCGGAGGTTGAGCCTGAGCCGGAACCGGAGCCAATGGAGGAGGTGGCTGATGAGGAGAAGGAAGTGAAGCAGAGGAAGGCTGAGGCGCAGAAGGAGAAGGAGGCTGGTAATGCTGCGTATAAGAAGAAGGATTTTGATACCGCGATTCAGCATTATTCGAAAGCTTTGGAATTGGATGATGAGGATGTTTCCTTCCTCACTAACCGTGCTGCTGTATACTTGGAAATGGGAAAGGTATGAATTTTCCTATGTATATGTTTTTGACAAATATTTATCTACATGTATGCGTGTGTGTATATATGTATGTATGCATTGTGTTCCTATTGTTTGCTAATTACGCATTGTTCTATCTGAATTTAGTCTAGTTTCATTGCTAAGGTTATTTATTTGACTATAATTTTACTGCTTACTTGCTTAGTTATAGACTATAGTATATGGTCTAACTGTGCTATCTCGATGCAAAGGGGCAGTGTTTTTTAGTTTGACCCCATAGGTGAAATGTGTTAAATTTAGCCTGTTCTACTTTTTTCATAGGTGAAAAGGTGTTTAACTTGGTCTGTTGTGTACTTGTACTCAAAACTTGTCCTTTTAACTATTTCCAATTAAACCCCATGACAATTCCATTGAATTGATGTACTATCAAGTATATGAACCAAATTGAAAAGGCTATTATGTATTAGCCATGAAAATACATTATTTTGTTTTTTATGTGGGACAAGTATATTGATTTGTTCCTGGTACTTGGAAGTGGTGATAATACATCTTATTGTTAGACAGAACTATTGTTTTATGGAAGCTGGAAATTATCTCCCAAGTGTGTGATTAAACATACTTTTGTTTGTGGGTGATGCGTTGATATCTATGATGCTCTCAATTTATAGAGTGGGGCTTTACGCCTTATTTGAGAGAATGTTTGGGATTAATATATTTTTAATTTTGTGCGTATTATAATGATATAAGTATTGGATTTGAAGAATTTATCAAACTAAAGAAAAATTAACTGCCCATTTGAGTTAGGGGGACTATCCTTTCTACCATTTTCATTTCCTCCCTTTTATCCAAAGCCTTCTCTTCCCCTTCTCTCATAATCTCTCGAACAGACCCTTAGGCTTTAATTGGGAGTTTATAGGAGAATGAAGGAGAGAGTTTTTTGGATAAAAGAAGTAAATGGGAAGTTGTGACTGACTAGCCTCCTCACCTTGCATGACATATTTTTCTTCAATAGACTGAAACCCTAAAATATGCGGTAACTTAAAAATGCACTGGGAGAGGACTTTGAAGGGTGTTTTAGAGGATTTTGAATAAATTTTTAAATCCATTATTTTCTTTATTAGACTTTCAAAATGAAAAAAATATCGTCCATAAGATTTTCATTTTGATCCCTCAATACTCTCCTAGAAAAAGTGAAGATGCTCCTATTCTCTACCCCCTTCGCCCCAAAGCCCTCCTCCGTCCCCTCCCTCTCTCCAGTCTCCCATTCAAAGCCTTAAGGTTACCTTGGTACTGAAGGTTGTCTTTGGTTTATTATCATGAACTGCATGTCTTAGAAATTCTGTAATCCTGGAATCTAATCACACTGGAGTTAAATGACCCTTTAACAACCCCAATAATATTTTCAAGACTGCTGAGAATTTAGGATTTTATGTAGTTATGCCATTATATGCAAAATACTCTGATTTTCCAGCAGAGTATTTGGCATCCTCCAATAGTATTAGATATTTATGAAGTGTAAGTCTTGAGATCTATAATTATACCTGCTTATTGCACTTAGCATCCAAAACATAACAGCGGTTTTGTTGTTAAAGCTTGTTTCAGTGTTTGATGGTTACAGAACTTGGTCAAATTTTACTATGGTTTGAGTGTTTAAATAGGATTAGGAAGATTTCCTAGTGTTTGAATAGGATTAGGAAGAGAAAAATCTAAGGGTTTTTTAAAGTTAAGTCAAGGGACACTTCTTACCTGTAATGTATTTTGATAAATATTCCTTGAATCTTTTCAGTATGAGGATTGCATAAAAGATTGTGATAAGGCTGTTGAAAGAGGACGAGAGCTAAGAGCAGACTACAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCATGGGTAAAACGGCAAAATGCTCTAAAGATTATGAACCCGTCATTGAGACTTACCAAAAAGCGCTTACAGAGCACCGTAACCCAGACACCCTGAAGAAACTCAATGAAGCTGAGAAGGCCAAGAAAGAACTAGAACAACAAGAATACTTCGATCCAAATTTGGCTGATGAGGAGAGAGAAAAAGGTACTATCTCTTGGTCTGATCTTCCAGGCTCTTCATTTCCTGCAAGCATCCTTCTCCTAGCCTCTATTTCCACATTATTGTTTTGACTCAATCTTATTTGTAGACTGTGTTAATGTATGAAAACCTTGTCTTGCAGGGAATGAATACTTTAAGCAGCAGAAGTATCCTGAAGCTATTAAGCATTACACAGAGTCTATAAAAAGAAACCCGAAAAATCCTAAGGTAATAATACTCTTTGCATTCAGGTCGTCCTTATGGTTATGCTATCTGAATCCTAACATGTTCGAATACTCCATTTCTTTCAGGCTTATAGTAACAGAGCTGCATGTTACACAAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGTATTGAGCTTGATCCGACCTTCACCAAGGGTTATACCCGGAAGGGTGCGGTTCAGTTTTTCATGAAAGAATATGAAAAGGCTTTGGAAACATATCAGGAAGGGTTGAAACATGATGCAAACAACCAGGAATTGCTTGAAGGGGTTCGAAGGTACATATCATAGTGGTTAAAATCCCTGCAATGTGTTTAATACTTCCAGTTTCCCTTTTTGGCTGCAAATCATGTTTAACCATGTATATCCATTTCAGTTGTGTGAGGCAAATTAATAGAACCAGTCGTGGAGATGTAACTCCTGAAGAGTTGAAGGAGAGACAGGTTTGTCATATAGTGCCAAAATCTTTGCATTCAGAGATTATAATTTAAATATATATAATAATATATGCTGTATTTTGAATATTTTTTAGGCTAAGGCAATGGCAGATCCAGAGATTCAGAACATCCTTCAAGACCCTGTTATGAGACAGGTTTGCTTTTTCCTTGGCTTCATTGTGTATAATGTGCCACAGTAATAAGATGTGGTTATAATGGTTGGCTTTGTATGCAGGTATTGGTTGATTTCCAGGATAATCCTAAGGCTGCACAGGAACATACCAAGAACCCGGGTGTGATGGACAAGATCCAAAAGCTGATCAGTGCCGGAATTGTCCAGATGAAGTAA
Protein sequence

>MS.gene09948.t1

MADEAKAKGNAAFSSGDFATAIRHFSDAINLSPTNHVLYSNRSAAHASLQNYTDALTDAKKTVELKPDWSKGYSRLGAAHLGLSQYDEAVSAYKKGLEIDPNNEPLKSGLADAQKAAAGNFSRPRSAPGANPFGDAFSGPEMWAKLTADPTTRVYLQQPDFVKMMQDIQKDPNNLNLYLKDQRVMQAFGVLLNVKIGRGGDDVDMPDMPSSSERKRAAEPEVAKQAEVEPEPEPEPMEEVADEEKEVKQRKAEAQKEKEAGNAAYKKKDFDTAIQHYSKALELDDEDVSFLTNRAAVYLEMGKYEDCIKDCDKAVERGRELRADYKMIARALTRKGTAMGKTAKCSKDYEPVIETYQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPNLADEEREKGNEYFKQQKYPEAIKHYTESIKRNPKNPKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKALETYQEGLKHDANNQELLEGVRSCVRQINRTSRGDVTPEELKERQAKAMADPEIQNILQDPVMRQVLVDFQDNPKAAQEHTKNPGVMDKIQKLISAGIVQMK