AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015458

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015458.t1 MTR_5g012030 97.766 582 12 1 1 582 1 581 0.0 1180
MS.gene015458.t1 MTR_5g012050 72.381 105 28 1 241 345 3 106 4.24e-42 154
MS.gene015458.t1 MTR_3g452710 31.651 218 119 6 2 199 11 218 1.61e-19 92.0
MS.gene015458.t1 MTR_3g452710 31.897 116 79 0 393 508 11 126 1.14e-12 70.9
MS.gene015458.t1 MTR_1g041435 36.441 118 75 0 397 514 15 132 4.47e-19 89.0
MS.gene015458.t1 MTR_1g041435 35.354 99 64 0 6 104 15 113 1.36e-13 72.4
MS.gene015458.t1 MTR_3g452710 38.462 130 79 1 2 130 11 140 8.17e-18 87.4
MS.gene015458.t1 MTR_3g452710 31.897 116 79 0 393 508 11 126 1.20e-12 70.9
MS.gene015458.t1 MTR_7g115280 39.655 116 70 0 2 117 335 450 9.06e-17 83.6
MS.gene015458.t1 MTR_7g115280 33.065 124 80 1 393 513 335 458 1.75e-16 82.8
MS.gene015458.t1 MTR_5g009930 35.294 119 77 0 1 119 1 119 9.10e-17 82.0
MS.gene015458.t1 MTR_5g009930 29.060 117 83 0 392 508 1 117 8.69e-12 67.0
MS.gene015458.t1 MTR_1g030300 36.937 111 69 1 1 110 180 290 2.13e-16 82.4
MS.gene015458.t1 MTR_1g030300 31.092 119 81 1 385 502 173 291 3.10e-12 69.3
MS.gene015458.t1 MTR_5g009930 35.294 119 77 0 1 119 1 119 2.69e-16 81.3
MS.gene015458.t1 MTR_5g009930 29.060 117 83 0 392 508 1 117 1.02e-11 67.4
MS.gene015458.t1 MTR_6g053290 39.583 96 58 0 1 96 1 96 9.47e-14 73.6
MS.gene015458.t1 MTR_6g053290 26.923 156 99 1 392 532 1 156 2.52e-11 65.9
MS.gene015458.t1 MTR_6g053290 39.583 96 58 0 1 96 1 96 1.44e-13 73.2
MS.gene015458.t1 MTR_6g053290 26.923 156 99 1 392 532 1 156 3.39e-11 65.9
MS.gene015458.t1 MTR_2g078020 30.476 105 73 0 397 501 466 570 6.12e-13 72.0
MS.gene015458.t1 MTR_2g078020 30.476 105 73 0 397 501 466 570 7.39e-13 72.0
MS.gene015458.t1 MTR_7g059150 32.110 109 67 1 2 103 95 203 2.28e-12 68.2
MS.gene015458.t1 MTR_7g059150 27.536 138 85 2 372 502 82 211 7.09e-11 63.5
MS.gene015458.t1 MTR_4g094205 37.374 99 62 0 397 495 492 590 3.62e-12 69.7
MS.gene015458.t1 MTR_8g107280 29.630 135 89 1 367 495 447 581 1.51e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015458.t1 AT1G62740 73.469 588 133 4 1 582 1 571 0.0 882
MS.gene015458.t1 AT4G12400 71.870 583 138 4 1 582 1 558 0.0 880
MS.gene015458.t1 AT1G12270 73.254 587 137 6 1 582 1 572 0.0 847
MS.gene015458.t1 AT4G12400 71.298 547 131 4 1 546 1 522 0.0 817
MS.gene015458.t1 AT4G12400 33.333 186 123 1 392 576 1 186 6.49e-23 103
MS.gene015458.t1 AT1G04190 40.816 98 58 0 6 103 19 116 7.09e-18 85.5
MS.gene015458.t1 AT1G04190 39.623 106 64 0 397 502 19 124 1.28e-17 84.7
MS.gene015458.t1 AT4G08320 31.361 169 112 3 1 168 174 339 4.72e-17 84.3
MS.gene015458.t1 AT4G08320 33.094 139 86 3 372 508 158 291 8.71e-14 73.9
MS.gene015458.t1 AT4G08320 37.069 116 72 1 1 115 174 289 9.25e-17 83.2
MS.gene015458.t1 AT4G08320 33.094 139 86 3 372 508 158 291 7.01e-14 74.3
MS.gene015458.t1 AT3G04710 40.000 110 66 0 8 117 558 667 6.55e-16 81.6
MS.gene015458.t1 AT3G04710 30.841 107 74 0 399 505 558 664 2.69e-13 73.2
MS.gene015458.t1 AT3G04710 40.000 110 66 0 8 117 334 443 7.67e-16 80.9
MS.gene015458.t1 AT3G04710 30.841 107 74 0 399 505 334 440 1.64e-13 73.6
MS.gene015458.t1 AT3G04710 40.000 110 66 0 8 117 333 442 7.77e-16 80.5
MS.gene015458.t1 AT3G04710 30.841 107 74 0 399 505 333 439 1.60e-13 73.6
MS.gene015458.t1 AT2G42810 26.636 214 135 4 2 199 13 220 2.63e-15 79.3
MS.gene015458.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.61e-14 76.6
MS.gene015458.t1 AT2G42810 26.636 214 135 4 2 199 13 220 2.63e-15 79.3
MS.gene015458.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.61e-14 76.6
MS.gene015458.t1 AT2G42810 26.636 214 135 4 2 199 13 220 2.63e-15 79.3
MS.gene015458.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.61e-14 76.6
MS.gene015458.t1 AT4G11260 36.449 107 68 0 1 107 1 107 5.78e-15 77.0
MS.gene015458.t1 AT2G42810 33.621 116 77 0 2 117 13 128 1.18e-14 77.4
MS.gene015458.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.72e-14 77.0
MS.gene015458.t1 AT2G42810 33.621 116 77 0 2 117 13 128 1.20e-14 77.4
MS.gene015458.t1 AT2G42810 30.714 140 97 0 389 528 9 148 1.69e-14 77.0
MS.gene015458.t1 AT4G22670 36.893 103 65 0 2 104 123 225 8.61e-13 71.2
MS.gene015458.t1 AT3G17970 35.922 103 66 0 393 495 474 576 3.04e-12 69.7
MS.gene015458.t1 AT1G53300 28.829 111 79 0 391 501 463 573 7.52e-12 68.9
MS.gene015458.t1 AT1G78120 30.400 125 86 1 400 523 166 290 2.46e-11 67.0
MS.gene015458.t1 AT1G78120 30.400 125 86 1 400 523 166 290 2.73e-11 66.6
MS.gene015458.t1 AT3G58620 26.923 156 97 3 349 502 418 558 7.39e-11 65.5
MS.gene015458.t1 AT4G23570 27.473 182 118 5 25 202 25 196 8.81e-11 64.3
MS.gene015458.t1 AT4G23570 27.473 182 118 5 25 202 25 196 8.81e-11 64.3

Find 169 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCATCAGCCAAATT+TGG 0.136072 5.4:+6239729 None:intergenic
CAAATACAAATTCAAATTAT+TGG 0.139538 5.4:+6242147 None:intergenic
GATTTCAAGGGTTCATTATT+AGG 0.169330 5.4:+6242361 None:intergenic
CAGCTTCATTGAGTTTCTTC+AGG 0.191835 5.4:+6239793 None:intergenic
AGAATACTTCGATCCAAATT+TGG 0.199740 5.4:-6239742 MS.gene015458:CDS
TTGAGTTTCTTCAGGGTGTC+TGG 0.227086 5.4:+6239801 None:intergenic
TTGTTGTTCTAGTTCTTTCT+TGG 0.227451 5.4:+6239764 None:intergenic
CAGAGAGTTATGCAAGCTTT+TGG 0.262229 5.4:-6242118 MS.gene015458:CDS
TTCCGGCACTGATCAGCTTT+TGG 0.271295 5.4:+6238701 None:intergenic
AAATACAAATTCAAATTATT+GGG 0.271371 5.4:+6242148 None:intergenic
TTCCATCAATTTACTTCATC+TGG 0.271791 5.4:+6238674 None:intergenic
GTCCATCACACCCGGGTTCT+TGG 0.290667 5.4:+6238729 None:intergenic
GCAGGTATTGGTTGATTTCC+AGG 0.298727 5.4:-6238779 MS.gene015458:intron
AGCTGCATGTTACACAAAAC+TGG 0.310459 5.4:-6239379 MS.gene015458:CDS
TCCTCCATTGGCTCCGGTTC+CGG 0.312001 5.4:+6241968 None:intergenic
TCCGAACTGGACGGCATATC+AGG 0.312824 5.4:+6242046 None:intergenic
AAGCAAACCTGTCTCATAAC+AGG 0.314328 5.4:+6238870 None:intergenic
GGCAATGCCTGAAGGTTTAA+AGG 0.321704 5.4:-6239355 MS.gene015458:CDS
GCTGATGAGGAGAGAGAAAA+AGG 0.335378 5.4:-6239720 MS.gene015458:intron
TTAAAGCGTCAGTGTAATTC+TGG 0.337616 5.4:+6242515 None:intergenic
AAAACTGAACCGCACCCTTC+CGG 0.339040 5.4:+6239283 None:intergenic
TCTGCATCCTTTAAACCTTC+AGG 0.340625 5.4:+6239348 None:intergenic
TGTCTCTCCTTCAACTCTTC+AGG 0.344507 5.4:+6239028 None:intergenic
AATAATGAACCCTTGAAATC+AGG 0.348019 5.4:-6242358 MS.gene015458:CDS
TGCATCATCTTCACAAAATC+AGG 0.348278 5.4:+6242187 None:intergenic
AAACTGAACCGCACCCTTCC+GGG 0.362337 5.4:+6239284 None:intergenic
GTATGTTCCTGTGCAGCCTT+AGG 0.362687 5.4:+6238751 None:intergenic
GAACCCCTTCAAGCAATTCC+TGG 0.364967 5.4:+6239196 None:intergenic
TTACTTCATCTGGACAATTC+CGG 0.371227 5.4:+6238684 None:intergenic
TAATTTGAATTTGTATTTGA+AGG 0.375764 5.4:-6242143 MS.gene015458:CDS
TAACCGTGCTGCTGTATACT+TGG 0.383148 5.4:-6241786 MS.gene015458:CDS
CTGTAACCCTTTGACCAATC+AGG 0.384513 5.4:+6242463 None:intergenic
CGTCTCGGTGCCGCTCATCT+TGG 0.384527 5.4:-6242439 MS.gene015458:CDS
ATTGGCTCCGGTTCCGGCTC+AGG 0.388295 5.4:+6241974 None:intergenic
GGAGAATGCAGCGTTGCCTT+TGG 0.390754 5.4:+6242642 None:intergenic
TTATTCGAAAGCTTTGGAAT+TGG 0.391355 5.4:-6241834 MS.gene015458:CDS
TCAGCATTATTCGAAAGCTT+TGG 0.396560 5.4:-6241840 MS.gene015458:CDS
TCCGCCTGCTTTGCCACCTC+AGG 0.396836 5.4:+6242004 None:intergenic
GTCTCATAACAGGGTCTTGA+AGG 0.401205 5.4:+6238880 None:intergenic
TTCTAGGCCACGTTCTGCGC+CGG 0.406464 5.4:-6242299 MS.gene015458:CDS
TGAAGGATGTTCTGAATCTC+TGG 0.407523 5.4:+6238897 None:intergenic
AAAGGCTTTGGAAACATATC+AGG 0.407801 5.4:-6239244 MS.gene015458:CDS
TCTTCAGGGTGTCTGGGTTA+CGG 0.408287 5.4:+6239808 None:intergenic
CAGCGGATCGGTTGGAATAC+AGG 0.412654 5.4:+6242551 None:intergenic
TGAAGATAAACCCTAGTTGT+AGG 0.413840 5.4:+6242214 None:intergenic
GTGTAATGCTTAATAGCTTC+AGG 0.414719 5.4:+6239533 None:intergenic
GCGCCGGGTGCCAATCCGTT+TGG 0.416911 5.4:-6242283 MS.gene015458:CDS
TCTAGGCCACGTTCTGCGCC+GGG 0.422100 5.4:-6242298 MS.gene015458:CDS
GAAAGAATATGAAAAGGCTT+TGG 0.427879 5.4:-6239256 MS.gene015458:CDS
ATCGGCTAAACCTGATTTCA+AGG 0.428004 5.4:+6242348 None:intergenic
AGCTTCATTGAGTTTCTTCA+GGG 0.428316 5.4:+6239794 None:intergenic
TGTAACTCCTGAAGAGTTGA+AGG 0.432085 5.4:-6239035 MS.gene015458:CDS
GCTGTTTCAGCTTACAAGAA+AGG 0.435873 5.4:-6242397 MS.gene015458:CDS
TGCTGCTGTATACTTGGAAA+TGG 0.437857 5.4:-6241780 MS.gene015458:CDS
TGAACCTGAGGTGGCAAAGC+AGG 0.443025 5.4:-6242008 MS.gene015458:CDS
CTCAAACCTGATTGGTCAAA+GGG 0.450036 5.4:-6242469 MS.gene015458:CDS
TGAAGAGTTGAAGGAGAGAC+AGG 0.450058 5.4:-6239026 MS.gene015458:intron
TGAGTTTCTTCAGGGTGTCT+GGG 0.451649 5.4:+6239802 None:intergenic
GGTTGAGCCTGAGCCGGAAC+CGG 0.452769 5.4:-6241981 MS.gene015458:CDS
CTGTTTCAGCTTACAAGAAA+GGG 0.455044 5.4:-6242396 MS.gene015458:CDS
GGAGGTGGCTGATGAGGAGA+AGG 0.455482 5.4:-6241948 MS.gene015458:CDS
TCATCAGCCACCTCCTCCAT+TGG 0.457433 5.4:+6241956 None:intergenic
TGGATCTTGTCCATCACACC+CGG 0.459995 5.4:+6238721 None:intergenic
GAGGAAGGCTGAGGCGCAGA+AGG 0.460304 5.4:-6241915 MS.gene015458:CDS
GGCTTTAGCTTCGTCGGCCA+TGG 0.464637 5.4:+6242663 None:intergenic
TCAAGACCCTGTTATGAGAC+AGG 0.467657 5.4:-6238877 MS.gene015458:intron
CTTAATGTTAAGATTGGAAG+AGG 0.468931 5.4:-6242088 MS.gene015458:CDS
AGCTCTCTTCCTCTCCGAAC+TGG 0.469541 5.4:+6242033 None:intergenic
GCCTGATATGCCGTCCAGTT+CGG 0.472399 5.4:-6242047 MS.gene015458:CDS
AGGAACTGCCATGGGTAAAA+CGG 0.477231 5.4:-6239892 MS.gene015458:CDS
CGATCCAAATTTGGCTGATG+AGG 0.478253 5.4:-6239733 MS.gene015458:CDS
TTTCATGAAAGAATATGAAA+AGG 0.488950 5.4:-6239262 MS.gene015458:CDS
TACTGCTGATCCTACAACTA+GGG 0.494571 5.4:-6242224 MS.gene015458:CDS
GCGCAGAAGGAGAAGGAGGC+TGG 0.498289 5.4:-6241902 MS.gene015458:CDS
ACCCTTCCGGGTATAACCCT+TGG 0.502655 5.4:+6239296 None:intergenic
GCCACCTCCTCCATTGGCTC+CGG 0.504102 5.4:+6241962 None:intergenic
TGAGCCGGAACCGGAGCCAA+TGG 0.504535 5.4:-6241972 MS.gene015458:CDS
ATCCAAAAGCTGATCAGTGC+CGG 0.507708 5.4:-6238703 MS.gene015458:CDS
ACCGGAGCCAATGGAGGAGG+TGG 0.508880 5.4:-6241963 MS.gene015458:CDS
AACAACCAGGAATTGCTTGA+AGG 0.509120 5.4:-6239201 MS.gene015458:CDS
GCCTTTGGCTTTAGCTTCGT+CGG 0.510652 5.4:+6242657 None:intergenic
GTAAGTTTCGCCCACATCTC+CGG 0.511152 5.4:+6242244 None:intergenic
GGCGGAGGTTGAGCCTGAGC+CGG 0.511864 5.4:-6241987 MS.gene015458:CDS
AGGAGAAGGAAGTGAAGCAG+AGG 0.515007 5.4:-6241934 MS.gene015458:CDS
GTGCAGCCTTAGGATTATCC+TGG 0.515436 5.4:+6238761 None:intergenic
GATGATGCAAGATATTCAAA+AGG 0.517290 5.4:-6242173 MS.gene015458:CDS
TACCAAGAACCCGGGTGTGA+TGG 0.520879 5.4:-6238731 MS.gene015458:CDS
AGCGTGAGCAGCGGATCGGT+TGG 0.522057 5.4:+6242543 None:intergenic
GTTGGAATACAGGACGTGAT+TGG 0.525153 5.4:+6242561 None:intergenic
GAATACAGGACGTGATTGGT+GGG 0.529765 5.4:+6242565 None:intergenic
TTGCATAAAAGATTGTGATA+AGG 0.530466 5.4:-6239979 MS.gene015458:CDS
ATACAGGACGTGATTGGTGG+GGG 0.535184 5.4:+6242567 None:intergenic
GCAAGAGCTTTGACAAGGAA+AGG 0.536678 5.4:-6239912 MS.gene015458:CDS
GGATAATCCTAAGGCTGCAC+AGG 0.537666 5.4:-6238758 MS.gene015458:CDS
AATGGAGGAGGTGGCTGATG+AGG 0.538534 5.4:-6241954 MS.gene015458:CDS
AGCAGCACGGTTAGTGAGGA+AGG 0.539890 5.4:+6241796 None:intergenic
TGAGGTGGCAAAGCAGGCGG+AGG 0.540052 5.4:-6242002 MS.gene015458:CDS
CCGTCGAACTCAAACCTGAT+TGG 0.540548 5.4:-6242477 MS.gene015458:CDS
AAAAGCATCACCAAACGGAT+TGG 0.541023 5.4:+6242273 None:intergenic
GGGTTATACCCGGAAGGGTG+CGG 0.542682 5.4:-6239292 MS.gene015458:CDS
TGATTTCCAGGATAATCCTA+AGG 0.545918 5.4:-6238767 MS.gene015458:CDS
CCAATCAGGTTTGAGTTCGA+CGG 0.546460 5.4:+6242477 None:intergenic
GGCTGAGGCGCAGAAGGAGA+AGG 0.547847 5.4:-6241909 MS.gene015458:CDS
ACAACCAGGAATTGCTTGAA+GGG 0.548142 5.4:-6239200 MS.gene015458:CDS
GAAACTCAATGAAGCTGAGA+AGG 0.551120 5.4:-6239787 MS.gene015458:CDS
GCTGCTGTATACTTGGAAAT+GGG 0.551340 5.4:-6241779 MS.gene015458:CDS
GGCAACGCTGCATTCTCCTC+CGG 0.551432 5.4:-6242637 MS.gene015458:CDS
GGAACCGGAGCCAATGGAGG+AGG 0.554085 5.4:-6241966 MS.gene015458:CDS
GGAATACAGGACGTGATTGG+TGG 0.554167 5.4:+6242564 None:intergenic
AGCTTTGGAATTGGATGATG+AGG 0.555608 5.4:-6241825 MS.gene015458:CDS
AGGAGTTACATCTCCACGAC+TGG 0.556546 5.4:+6239048 None:intergenic
GAAGAGAGCTGCTGAACCTG+AGG 0.556646 5.4:-6242020 MS.gene015458:CDS
ACTCAAACCTGATTGGTCAA+AGG 0.563775 5.4:-6242470 MS.gene015458:CDS
TCAAAGGGTTACAGCCGTCT+CGG 0.565098 5.4:-6242454 MS.gene015458:CDS
TGGAAGAGGTGGTGATGATG+TGG 0.569802 5.4:-6242074 MS.gene015458:CDS
TGTGATAAGGCTGTTGAAAG+AGG 0.569985 5.4:-6239966 MS.gene015458:CDS
TAATGCTGCGTATAAGAAGA+AGG 0.570012 5.4:-6241879 MS.gene015458:CDS
TCACCAAACGGATTGGCACC+CGG 0.570986 5.4:+6242280 None:intergenic
CAAGATGAGCGGCACCGAGA+CGG 0.571843 5.4:+6242440 None:intergenic
TGTATACTTGGAAATGGGAA+AGG 0.572009 5.4:-6241774 MS.gene015458:intron
TTGGCACCCGGCGCAGAACG+TGG 0.574389 5.4:+6242292 None:intergenic
CACCAAGGGTTATACCCGGA+AGG 0.575257 5.4:-6239298 MS.gene015458:CDS
AATTGCTTGAAGGGGTTCGA+AGG 0.576444 5.4:-6239191 MS.gene015458:intron
GCTGCATGTTACACAAAACT+GGG 0.580641 5.4:-6239378 MS.gene015458:CDS
ACCTGAGGTGGCAAAGCAGG+CGG 0.581309 5.4:-6242005 MS.gene015458:CDS
CCGGGTATAACCCTTGGTGA+AGG 0.581722 5.4:+6239302 None:intergenic
GAAGGAAGTGAAGCAGAGGA+AGG 0.582452 5.4:-6241930 MS.gene015458:CDS
AGTGAAGCAGAGGAAGGCTG+AGG 0.583668 5.4:-6241924 MS.gene015458:CDS
TGAGGCGCAGAAGGAGAAGG+AGG 0.586945 5.4:-6241906 MS.gene015458:CDS
ATACAGCAGCACGGTTAGTG+AGG 0.589306 5.4:+6241792 None:intergenic
GAGAGCTGCTGAACCTGAGG+TGG 0.589705 5.4:-6242017 MS.gene015458:CDS
CAAATTAATAGAACCAGTCG+TGG 0.593038 5.4:-6239061 MS.gene015458:CDS
AATACAGGACGTGATTGGTG+GGG 0.593162 5.4:+6242566 None:intergenic
ACAAGGAAAGGAACTGCCAT+GGG 0.594542 5.4:-6239900 MS.gene015458:CDS
CTTTGGAAACATATCAGGAA+GGG 0.595284 5.4:-6239239 MS.gene015458:CDS
GACAAGGAAAGGAACTGCCA+TGG 0.596247 5.4:-6239901 MS.gene015458:CDS
GCCGGAACCGGAGCCAATGG+AGG 0.596557 5.4:-6241969 MS.gene015458:CDS
TTACTGCTGATCCTACAACT+AGG 0.598575 5.4:-6242225 MS.gene015458:CDS
ACCAAGGGTTATACCCGGAA+GGG 0.604794 5.4:-6239297 MS.gene015458:CDS
AATGTTAAGATTGGAAGAGG+TGG 0.604956 5.4:-6242085 MS.gene015458:CDS
TCGGCTAAACCTGATTTCAA+GGG 0.605511 5.4:+6242349 None:intergenic
GAGAAGCGTGAGCAGCGGAT+CGG 0.606528 5.4:+6242539 None:intergenic
GATGGCGGTTGCGAAATCGC+CGG 0.612453 5.4:+6242618 None:intergenic
CTTGATCCGACCTTCACCAA+GGG 0.614925 5.4:-6239312 MS.gene015458:CDS
CAACCAGGAATTGCTTGAAG+GGG 0.617312 5.4:-6239199 MS.gene015458:CDS
GTATAACCCTTGGTGAAGGT+CGG 0.620353 5.4:+6239306 None:intergenic
GCTTTGGAAACATATCAGGA+AGG 0.623211 5.4:-6239240 MS.gene015458:CDS
ACAGGAACATACCAAGAACC+CGG 0.627654 5.4:-6238740 MS.gene015458:CDS
GCCGACGAAGCTAAAGCCAA+AGG 0.634082 5.4:-6242658 MS.gene015458:CDS
CTCTTCCTCTCCGAACTGGA+CGG 0.634577 5.4:+6242037 None:intergenic
GGCGGTTGCGAAATCGCCGG+AGG 0.634986 5.4:+6242621 None:intergenic
CCTTCACCAAGGGTTATACC+CGG 0.641665 5.4:-6239302 MS.gene015458:CDS
TGATGGCATCTGAGAAGTGA+CGG 0.645347 5.4:+6242596 None:intergenic
GCTTGATCCGACCTTCACCA+AGG 0.647351 5.4:-6239313 MS.gene015458:CDS
GGATCTTGTCCATCACACCC+GGG 0.653989 5.4:+6238722 None:intergenic
AGCAAACCTGTCTCATAACA+GGG 0.656878 5.4:+6238871 None:intergenic
GAAACATGATGCAAACAACC+AGG 0.657221 5.4:-6239214 MS.gene015458:CDS
ATCTGAGAAGTGACGGATGG+CGG 0.664337 5.4:+6242603 None:intergenic
ATATCCATTTCAGTTGTGTG+AGG 0.665497 5.4:-6239084 MS.gene015458:intron
CTGGAGAGAAGCGTGAGCAG+CGG 0.667719 5.4:+6242534 None:intergenic
GGCATCTGAGAAGTGACGGA+TGG 0.670607 5.4:+6242600 None:intergenic
TGATAGCAAGAGCTTTGACA+AGG 0.676277 5.4:-6239917 MS.gene015458:CDS
CAGGAACATACCAAGAACCC+GGG 0.680404 5.4:-6238739 MS.gene015458:CDS
TTTCCAAGTATACAGCAGCA+CGG 0.692729 5.4:+6241783 None:intergenic
CTGCATGTTACACAAAACTG+GGG 0.696032 5.4:-6239377 MS.gene015458:CDS
TTGAGAAAGACCAAGATGAG+CGG 0.707072 5.4:+6242429 None:intergenic
TGCATGTTACACAAAACTGG+GGG 0.723034 5.4:-6239376 MS.gene015458:CDS
ATATGCCGTCCAGTTCGGAG+AGG 0.733223 5.4:-6242042 MS.gene015458:CDS
TTTCGAATAATGCTGAATCG+CGG 0.745844 5.4:+6241847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAATTCAAATTATT+GGG + chr5.4:6239200-6239219 None:intergenic 10.0%
!! TATTATAATGATATAAGTAT+TGG - chr5.4:6240302-6240321 MS.gene015458:intron 10.0%
!! AAGTCTAATAAAGAAAATAA+TGG + chr5.4:6240677-6240696 None:intergenic 15.0%
!! CAAATACAAATTCAAATTAT+TGG + chr5.4:6239201-6239220 None:intergenic 15.0%
!! TAATTTGAATTTGTATTTGA+AGG - chr5.4:6239202-6239221 MS.gene015458:CDS 15.0%
!! TATTTATCAAAATACATTAC+AGG + chr5.4:6241320-6241339 None:intergenic 15.0%
!! TCATAAATATCTAATACTAT+TGG + chr5.4:6241064-6241083 None:intergenic 15.0%
!! TTTAATTGGAAATAGTTAAA+AGG + chr5.4:6239946-6239965 None:intergenic 15.0%
!!! AACAAAATAATGTATTTTCA+TGG + chr5.4:6240042-6240061 None:intergenic 15.0%
!!! ACATTATTTTGTTTTTTATG+TGG - chr5.4:6240049-6240068 MS.gene015458:intron 15.0%
!!! CATTATTTTGTTTTTTATGT+GGG - chr5.4:6240050-6240069 MS.gene015458:intron 15.0%
!!! CTGTATTTTGAATATTTTTT+AGG - chr5.4:6242408-6242427 MS.gene015458:CDS 15.0%
!! TAAATATCTAATACTATTGG+AGG + chr5.4:6241061-6241080 None:intergenic 20.0%
!! TAGTTATAGACTATAGTATA+TGG - chr5.4:6239774-6239793 MS.gene015458:CDS 20.0%
!! TTTCATGAAAGAATATGAAA+AGG - chr5.4:6242083-6242102 MS.gene015458:CDS 20.0%
!! TTTGGATAAAAGAAGTAAAT+GGG - chr5.4:6240508-6240527 MS.gene015458:intron 20.0%
!! TTTGTCAAAAACATATACAT+AGG + chr5.4:6239607-6239626 None:intergenic 20.0%
!!! ATTAAACATACTTTTGTTTG+TGG - chr5.4:6240180-6240199 MS.gene015458:intron 20.0%
!!! ATTATTACCTTAGGATTTTT+CGG + chr5.4:6241857-6241876 None:intergenic 20.0%
!!! GTTTTTTAAAGTTAAGTCAA+GGG - chr5.4:6241284-6241303 MS.gene015458:intron 20.0%
!!! TTAAACATACTTTTGTTTGT+GGG - chr5.4:6240181-6240200 MS.gene015458:intron 20.0%
!!! TTTGAATATTTTTTAGGCTA+AGG - chr5.4:6242414-6242433 MS.gene015458:CDS 20.0%
!!! TTTTGGATAAAAGAAGTAAA+TGG - chr5.4:6240507-6240526 MS.gene015458:intron 20.0%
! AAACAATAATGTGGAAATAG+AGG + chr5.4:6241710-6241729 None:intergenic 25.0%
! AATATTATTGGGGTTGTTAA+AGG + chr5.4:6240953-6240972 None:intergenic 25.0%
! AATTTAACACATTTCACCTA+TGG + chr5.4:6239849-6239868 None:intergenic 25.0%
! AGCAGTCTTGAAAATATTAT+TGG + chr5.4:6240965-6240984 None:intergenic 25.0%
! ATATTATTGGGGTTGTTAAA+GGG + chr5.4:6240952-6240971 None:intergenic 25.0%
! ATTAGGAAGAGAAAAATCTA+AGG - chr5.4:6241261-6241280 MS.gene015458:intron 25.0%
! ATTGAGTCAAAACAATAATG+TGG + chr5.4:6241719-6241738 None:intergenic 25.0%
! ATTTAACACATTTCACCTAT+GGG + chr5.4:6239848-6239867 None:intergenic 25.0%
! CAGTCTTGAAAATATTATTG+GGG + chr5.4:6240963-6240982 None:intergenic 25.0%
! GCAGTCTTGAAAATATTATT+GGG + chr5.4:6240964-6240983 None:intergenic 25.0%
! GGATCAAAATGAAAATCTTA+TGG + chr5.4:6240721-6240740 None:intergenic 25.0%
! GTAATAAGATGTGGTTATAA+TGG - chr5.4:6242531-6242550 MS.gene015458:CDS 25.0%
! GTATATGAACCAAATTGAAA+AGG - chr5.4:6240002-6240021 MS.gene015458:intron 25.0%
! TAATAATACTCTTTGCATTC+AGG - chr5.4:6241870-6241889 MS.gene015458:CDS 25.0%
! TATGGTTTGAGTGTTTAAAT+AGG - chr5.4:6241208-6241227 MS.gene015458:intron 25.0%
! TTAGGAAGAGAAAAATCTAA+GGG - chr5.4:6241262-6241281 MS.gene015458:intron 25.0%
! TTGAGTGTTTAAATAGGATT+AGG - chr5.4:6241214-6241233 MS.gene015458:intron 25.0%
! TTGCATAAAAGATTGTGATA+AGG - chr5.4:6241366-6241385 MS.gene015458:intron 25.0%
!! AACTTGGTCAAATTTTACTA+TGG - chr5.4:6241190-6241209 MS.gene015458:intron 25.0%
!! ACATAATAGCCTTTTCAATT+TGG + chr5.4:6240014-6240033 None:intergenic 25.0%
!! GTTTTGCTTAATGTTAAGAT+TGG - chr5.4:6239251-6239270 MS.gene015458:CDS 25.0%
!! TTAAGTTACCGCATATTTTA+GGG + chr5.4:6240594-6240613 None:intergenic 25.0%
!! TTATTACCTTAGGATTTTTC+GGG + chr5.4:6241856-6241875 None:intergenic 25.0%
!! TTGATAGTACATCAATTCAA+TGG + chr5.4:6239982-6240001 None:intergenic 25.0%
!!! GGTTTTTTAAAGTTAAGTCA+AGG - chr5.4:6241283-6241302 MS.gene015458:intron 25.0%
!!! TACTTTTTTCATAGGTGAAA+AGG - chr5.4:6239879-6239898 MS.gene015458:CDS 25.0%
!!! TAGACAGAACTATTGTTTTA+TGG - chr5.4:6240129-6240148 MS.gene015458:intron 25.0%
!!! TCAGAGTATTTTGCATATAA+TGG + chr5.4:6241015-6241034 None:intergenic 25.0%
!!! TTTAAGTTACCGCATATTTT+AGG + chr5.4:6240595-6240614 None:intergenic 25.0%
AATAATGAACCCTTGAAATC+AGG - chr5.4:6238987-6239006 MS.gene015458:intron 30.0%
AATTCAATGGAATTGTCATG+GGG + chr5.4:6239969-6239988 None:intergenic 30.0%
ACAACTGAAATGGATATACA+TGG + chr5.4:6242258-6242277 None:intergenic 30.0%
ACCTATGAAAAAAGTAGAAC+AGG + chr5.4:6239875-6239894 None:intergenic 30.0%
AGAATACTTCGATCCAAATT+TGG - chr5.4:6241603-6241622 MS.gene015458:intron 30.0%
AGATTTCCTAGTGTTTGAAT+AGG - chr5.4:6241238-6241257 MS.gene015458:intron 30.0%
AGGAAATGAAAATGGTAGAA+AGG + chr5.4:6240388-6240407 None:intergenic 30.0%
AGTATGTTTAATCACACACT+TGG + chr5.4:6240172-6240191 None:intergenic 30.0%
ATAACCACATCTTATTACTG+TGG + chr5.4:6242529-6242548 None:intergenic 30.0%
ATGCGTAATTAGCAAACAAT+AGG + chr5.4:6239681-6239700 None:intergenic 30.0%
ATGCTCTCAATTTATAGAGT+GGG - chr5.4:6240223-6240242 MS.gene015458:intron 30.0%
ATTCAGATAGCATAACCATA+AGG + chr5.4:6241900-6241919 None:intergenic 30.0%
CAATTCAATGGAATTGTCAT+GGG + chr5.4:6239970-6239989 None:intergenic 30.0%
CTTAATGTTAAGATTGGAAG+AGG - chr5.4:6239257-6239276 MS.gene015458:CDS 30.0%
GAAAGAATATGAAAAGGCTT+TGG - chr5.4:6242089-6242108 MS.gene015458:CDS 30.0%
GAAGAAAAATATGTCATGCA+AGG + chr5.4:6240559-6240578 None:intergenic 30.0%
GATGATGCAAGATATTCAAA+AGG - chr5.4:6239172-6239191 MS.gene015458:intron 30.0%
GATTTCAAGGGTTCATTATT+AGG + chr5.4:6238987-6239006 None:intergenic 30.0%
GTATGTTTAATCACACACTT+GGG + chr5.4:6240171-6240190 None:intergenic 30.0%
TAAAAGGGAGGAAATGAAAA+TGG + chr5.4:6240396-6240415 None:intergenic 30.0%
TAAGATGTGGTTATAATGGT+TGG - chr5.4:6242535-6242554 MS.gene015458:CDS 30.0%
TACTATAAGCCTGAAAGAAA+TGG + chr5.4:6241942-6241961 None:intergenic 30.0%
TCAATTCAATGGAATTGTCA+TGG + chr5.4:6239971-6239990 None:intergenic 30.0%
TCTTAGAAATTCTGTAATCC+TGG - chr5.4:6240900-6240919 MS.gene015458:intron 30.0%
TTTAACACATTTCACCTATG+GGG + chr5.4:6239847-6239866 None:intergenic 30.0%
! ATCTCTGAATGCAAAGATTT+TGG + chr5.4:6242359-6242378 None:intergenic 30.0%
! CCTTATTTGAGAGAATGTTT+GGG - chr5.4:6240254-6240273 MS.gene015458:intron 30.0%
! GAAGTATTAAACACATTGCA+GGG + chr5.4:6242202-6242221 None:intergenic 30.0%
! TTAGTCTAGTTTCATTGCTA+AGG - chr5.4:6239715-6239734 MS.gene015458:intron 30.0%
!! AACTATTGTTTTATGGAAGC+TGG - chr5.4:6240136-6240155 MS.gene015458:intron 30.0%
!! CAAGTATATTGATTTGTTCC+TGG - chr5.4:6240074-6240093 MS.gene015458:intron 30.0%
!! GCAAAGAGTATTATTACCTT+AGG + chr5.4:6241866-6241885 None:intergenic 30.0%
!! TTATTCGAAAGCTTTGGAAT+TGG - chr5.4:6239511-6239530 MS.gene015458:CDS 30.0%
!! TTGTTGTTCTAGTTCTTTCT+TGG + chr5.4:6241584-6241603 None:intergenic 30.0%
!! TTTTTGGTAAGTCTCAATGA+CGG + chr5.4:6241503-6241522 None:intergenic 30.0%
!!! TATTTTTTAGGCTAAGGCAA+TGG - chr5.4:6242420-6242439 MS.gene015458:CDS 30.0%
!!! TTTTTCTAGGAGAGTATTGA+GGG + chr5.4:6240742-6240761 None:intergenic 30.0%
AAAATATGTCATGCAAGGTG+AGG + chr5.4:6240554-6240573 None:intergenic 35.0%
AAACTCCCAATTAAAGCCTA+AGG + chr5.4:6240464-6240483 None:intergenic 35.0%
AACTCCCAATTAAAGCCTAA+GGG + chr5.4:6240463-6240482 None:intergenic 35.0%
AAGAAACCCGAAAAATCCTA+AGG - chr5.4:6241847-6241866 MS.gene015458:CDS 35.0%
AATGTTAAGATTGGAAGAGG+TGG - chr5.4:6239260-6239279 MS.gene015458:CDS 35.0%
AGCTTCATTGAGTTTCTTCA+GGG + chr5.4:6241554-6241573 None:intergenic 35.0%
ATAATGTGGAAATAGAGGCT+AGG + chr5.4:6241705-6241724 None:intergenic 35.0%
ATATCCATTTCAGTTGTGTG+AGG - chr5.4:6242261-6242280 MS.gene015458:CDS 35.0%
CAAATTAATAGAACCAGTCG+TGG - chr5.4:6242284-6242303 MS.gene015458:CDS 35.0%
CATTATACACAATGAAGCCA+AGG + chr5.4:6242504-6242523 None:intergenic 35.0%
CCCAAACATTCTCTCAAATA+AGG + chr5.4:6240257-6240276 None:intergenic 35.0%
CCTAATCCTATTCAAACACT+AGG + chr5.4:6241247-6241266 None:intergenic 35.0%
CCTAGTGTTTGAATAGGATT+AGG - chr5.4:6241244-6241263 MS.gene015458:intron 35.0%
CCTCATACTGAAAAGATTCA+AGG + chr5.4:6241345-6241364 None:intergenic 35.0%
CGGTAACTTAAAAATGCACT+GGG - chr5.4:6240603-6240622 MS.gene015458:intron 35.0%
CTGTTTCAGCTTACAAGAAA+GGG - chr5.4:6238949-6238968 MS.gene015458:intron 35.0%
GAATTGTCATGGGGTTTAAT+TGG + chr5.4:6239960-6239979 None:intergenic 35.0%
GACTGAAACCCTAAAATATG+CGG - chr5.4:6240583-6240602 MS.gene015458:intron 35.0%
GATGCTCTCAATTTATAGAG+TGG - chr5.4:6240222-6240241 MS.gene015458:intron 35.0%
GTGTAATGCTTAATAGCTTC+AGG + chr5.4:6241815-6241834 None:intergenic 35.0%
TAATGCTGCGTATAAGAAGA+AGG - chr5.4:6239466-6239485 MS.gene015458:intron 35.0%
TAGCATCCAAAACATAACAG+CGG - chr5.4:6241127-6241146 MS.gene015458:intron 35.0%
TATGAAAACCTTGTCTTGCA+GGG - chr5.4:6241762-6241781 MS.gene015458:intron 35.0%
TCAGCATTATTCGAAAGCTT+TGG - chr5.4:6239505-6239524 MS.gene015458:CDS 35.0%
TCGAATACTCCATTTCTTTC+AGG - chr5.4:6241930-6241949 MS.gene015458:CDS 35.0%
TGAAGATAAACCCTAGTTGT+AGG + chr5.4:6239134-6239153 None:intergenic 35.0%
TGATTTCCAGGATAATCCTA+AGG - chr5.4:6242578-6242597 MS.gene015458:CDS 35.0%
TGCATCATCTTCACAAAATC+AGG + chr5.4:6239161-6239180 None:intergenic 35.0%
TGCTCTCAATTTATAGAGTG+GGG - chr5.4:6240224-6240243 MS.gene015458:intron 35.0%
TGTATACTTGGAAATGGGAA+AGG - chr5.4:6239571-6239590 MS.gene015458:intron 35.0%
TTACTTCATCTGGACAATTC+CGG + chr5.4:6242664-6242683 None:intergenic 35.0%
TTCAAGACTGCTGAGAATTT+AGG - chr5.4:6240973-6240992 MS.gene015458:intron 35.0%
TTCGAGAGATTATGAGAGAA+GGG + chr5.4:6240436-6240455 None:intergenic 35.0%
TTTCGAATAATGCTGAATCG+CGG + chr5.4:6239501-6239520 None:intergenic 35.0%
! AACATGATTTGCAGCCAAAA+AGG + chr5.4:6242232-6242251 None:intergenic 35.0%
! AAGCTTGTTTCAGTGTTTGA+TGG - chr5.4:6241161-6241180 MS.gene015458:intron 35.0%
! ACAAAACCGCTGTTATGTTT+TGG + chr5.4:6241136-6241155 None:intergenic 35.0%
! ACATGATTTGCAGCCAAAAA+GGG + chr5.4:6242231-6242250 None:intergenic 35.0%
! AGAGAGTTATGCAAGCTTTT+GGG - chr5.4:6239228-6239247 MS.gene015458:CDS 35.0%
! ATACTTCCAGTTTCCCTTTT+TGG - chr5.4:6242215-6242234 MS.gene015458:CDS 35.0%
! ATGGAGTATTCGAACATGTT+AGG + chr5.4:6241923-6241942 None:intergenic 35.0%
! ATTAACTGCCCATTTGAGTT+AGG - chr5.4:6240354-6240373 MS.gene015458:intron 35.0%
! CCTTGAATCTTTTCAGTATG+AGG - chr5.4:6241342-6241361 MS.gene015458:intron 35.0%
! CTTTGGAAACATATCAGGAA+GGG - chr5.4:6242106-6242125 MS.gene015458:CDS 35.0%
! GGCTTTAATTGGGAGTTTAT+AGG - chr5.4:6240466-6240485 MS.gene015458:intron 35.0%
! TGTTTGATGGTTACAGAACT+TGG - chr5.4:6241174-6241193 MS.gene015458:intron 35.0%
! TTAAAGCGTCAGTGTAATTC+TGG + chr5.4:6238833-6238852 None:intergenic 35.0%
! TTAACTGCCCATTTGAGTTA+GGG - chr5.4:6240355-6240374 MS.gene015458:intron 35.0%
! TTCGAAGGTACATATCATAG+TGG - chr5.4:6242169-6242188 MS.gene015458:CDS 35.0%
! TTTTGGTAAGTCTCAATGAC+GGG + chr5.4:6241502-6241521 None:intergenic 35.0%
!! AAAGGCTTTGGAAACATATC+AGG - chr5.4:6242101-6242120 MS.gene015458:CDS 35.0%
!! AAGAGAAGGCTTTGGATAAA+AGG + chr5.4:6240412-6240431 None:intergenic 35.0%
!! AGAGAAGGCTTTGGATAAAA+GGG + chr5.4:6240411-6240430 None:intergenic 35.0%
!! AGGTGAAAAGGTGTTTAACT+TGG - chr5.4:6239891-6239910 MS.gene015458:CDS 35.0%
!! ATTGATTTGTTCCTGGTACT+TGG - chr5.4:6240081-6240100 MS.gene015458:intron 35.0%
!! GAGAAAAAGGTACTATCTCT+TGG - chr5.4:6241638-6241657 MS.gene015458:intron 35.0%
!! GCCTTATTTGAGAGAATGTT+TGG - chr5.4:6240253-6240272 MS.gene015458:intron 35.0%
!! GGAAGTATTAAACACATTGC+AGG + chr5.4:6242203-6242222 None:intergenic 35.0%
!! GTAACCTTAAGGCTTTGAAT+GGG + chr5.4:6240835-6240854 None:intergenic 35.0%
!! TGATTTTCCAGCAGAGTATT+TGG - chr5.4:6241032-6241051 MS.gene015458:intron 35.0%
!!! CTTTTTCTAGGAGAGTATTG+AGG + chr5.4:6240743-6240762 None:intergenic 35.0%
!!! GAATGAAGGAGAGAGTTTTT+TGG - chr5.4:6240490-6240509 MS.gene015458:intron 35.0%
!!! GCCTGTTCTACTTTTTTCAT+AGG - chr5.4:6239871-6239890 MS.gene015458:CDS 35.0%
!!! GTTTTTTAGTTTGACCCCAT+AGG - chr5.4:6239830-6239849 MS.gene015458:CDS 35.0%
AAAGACAACCTTCAGTACCA+AGG + chr5.4:6240857-6240876 None:intergenic 40.0%
AACAACCAGGAATTGCTTGA+AGG - chr5.4:6242144-6242163 MS.gene015458:CDS 40.0%
AAGCAAACCTGTCTCATAAC+AGG + chr5.4:6242478-6242497 None:intergenic 40.0%
ACAACCAGGAATTGCTTGAA+GGG - chr5.4:6242145-6242164 MS.gene015458:CDS 40.0%
ACTTAAAAATGCACTGGGAG+AGG - chr5.4:6240608-6240627 MS.gene015458:intron 40.0%
AGCAAACCTGTCTCATAACA+GGG + chr5.4:6242477-6242496 None:intergenic 40.0%
AGCTGCATGTTACACAAAAC+TGG - chr5.4:6241966-6241985 MS.gene015458:CDS 40.0%
ATAGTCCCCCTAACTCAAAT+GGG + chr5.4:6240365-6240384 None:intergenic 40.0%
ATCCTGGAATCTAATCACAC+TGG - chr5.4:6240916-6240935 MS.gene015458:intron 40.0%
ATCGGCTAAACCTGATTTCA+AGG + chr5.4:6239000-6239019 None:intergenic 40.0%
CAGCTTCATTGAGTTTCTTC+AGG + chr5.4:6241555-6241574 None:intergenic 40.0%
CTGCATGTTACACAAAACTG+GGG - chr5.4:6241968-6241987 MS.gene015458:CDS 40.0%
GAAACATGATGCAAACAACC+AGG - chr5.4:6242131-6242150 MS.gene015458:CDS 40.0%
GAAACTCAATGAAGCTGAGA+AGG - chr5.4:6241558-6241577 MS.gene015458:intron 40.0%
GCGGTAACTTAAAAATGCAC+TGG - chr5.4:6240602-6240621 MS.gene015458:intron 40.0%
GCTGCATGTTACACAAAACT+GGG - chr5.4:6241967-6241986 MS.gene015458:CDS 40.0%
GCTGCTGTATACTTGGAAAT+GGG - chr5.4:6239566-6239585 MS.gene015458:intron 40.0%
GGGAGTTTATAGGAGAATGA+AGG - chr5.4:6240476-6240495 MS.gene015458:intron 40.0%
GTATGAAAACCTTGTCTTGC+AGG - chr5.4:6241761-6241780 MS.gene015458:intron 40.0%
GTTCGAGAGATTATGAGAGA+AGG + chr5.4:6240437-6240456 None:intergenic 40.0%
TACTGCTGATCCTACAACTA+GGG - chr5.4:6239121-6239140 MS.gene015458:intron 40.0%
TATTCATTCCCTGCAAGACA+AGG + chr5.4:6241773-6241792 None:intergenic 40.0%
TCAAAGCCTTAAGGTTACCT+TGG - chr5.4:6240837-6240856 MS.gene015458:intron 40.0%
TCAGTACCAAGGTAACCTTA+AGG + chr5.4:6240846-6240865 None:intergenic 40.0%
TCGAGAGATTATGAGAGAAG+GGG + chr5.4:6240435-6240454 None:intergenic 40.0%
TCGGCTAAACCTGATTTCAA+GGG + chr5.4:6238999-6239018 None:intergenic 40.0%
TCTGCATCCTTTAAACCTTC+AGG + chr5.4:6242000-6242019 None:intergenic 40.0%
TGCATGTTACACAAAACTGG+GGG - chr5.4:6241969-6241988 MS.gene015458:CDS 40.0%
TGCTGCTGTATACTTGGAAA+TGG - chr5.4:6239565-6239584 MS.gene015458:CDS 40.0%
TGTAACTCCTGAAGAGTTGA+AGG - chr5.4:6242310-6242329 MS.gene015458:CDS 40.0%
TGTGATAAGGCTGTTGAAAG+AGG - chr5.4:6241379-6241398 MS.gene015458:intron 40.0%
TGTGCCACAGTAATAAGATG+TGG - chr5.4:6242522-6242541 MS.gene015458:CDS 40.0%
TTACTGCTGATCCTACAACT+AGG - chr5.4:6239120-6239139 MS.gene015458:intron 40.0%
TTGAGAAAGACCAAGATGAG+CGG + chr5.4:6238919-6238938 None:intergenic 40.0%
TTTCCAAGTATACAGCAGCA+CGG + chr5.4:6239565-6239584 None:intergenic 40.0%
TTTGCCTCACACAACTGAAA+TGG + chr5.4:6242268-6242287 None:intergenic 40.0%
! ACAGACCCTTAGGCTTTAAT+TGG - chr5.4:6240455-6240474 MS.gene015458:intron 40.0%
! ACTCAAACCTGATTGGTCAA+AGG - chr5.4:6238875-6238894 MS.gene015458:intron 40.0%
! CAGACCCTTAGGCTTTAATT+GGG - chr5.4:6240456-6240475 MS.gene015458:intron 40.0%
! CAGAGAGTTATGCAAGCTTT+TGG - chr5.4:6239227-6239246 MS.gene015458:CDS 40.0%
! CTCAAACCTGATTGGTCAAA+GGG - chr5.4:6238876-6238895 MS.gene015458:intron 40.0%
! GAGAGTTATGCAAGCTTTTG+GGG - chr5.4:6239229-6239248 MS.gene015458:CDS 40.0%
! GCTGTTTCAGCTTACAAGAA+AGG - chr5.4:6238948-6238967 MS.gene015458:intron 40.0%
! TAACTGCCCATTTGAGTTAG+GGG - chr5.4:6240356-6240375 MS.gene015458:intron 40.0%
! TAAGGTTACCTTGGTACTGA+AGG - chr5.4:6240846-6240865 MS.gene015458:intron 40.0%
! TGAAGGATGTTCTGAATCTC+TGG + chr5.4:6242451-6242470 None:intergenic 40.0%
! TGATAGCAAGAGCTTTGACA+AGG - chr5.4:6241428-6241447 MS.gene015458:intron 40.0%
! TTCGACGGTTTTCTTTGCAT+CGG + chr5.4:6238856-6238875 None:intergenic 40.0%
! TTGGTACTGAAGGTTGTCTT+TGG - chr5.4:6240856-6240875 MS.gene015458:intron 40.0%
!! AAAAGCATCACCAAACGGAT+TGG + chr5.4:6239075-6239094 None:intergenic 40.0%
!! AGCTTTGGAATTGGATGATG+AGG - chr5.4:6239520-6239539 MS.gene015458:CDS 40.0%
!! CCAGAAAAAGCATCACCAAA+CGG + chr5.4:6239080-6239099 None:intergenic 40.0%
!! GCTTTGGAAACATATCAGGA+AGG - chr5.4:6242105-6242124 MS.gene015458:CDS 40.0%
!! GGTAACCTTAAGGCTTTGAA+TGG + chr5.4:6240836-6240855 None:intergenic 40.0%
!! TAATGGTTGGCTTTGTATGC+AGG - chr5.4:6242548-6242567 MS.gene015458:CDS 40.0%
!! TTGGCTTTGTATGCAGGTAT+TGG - chr5.4:6242554-6242573 MS.gene015458:CDS 40.0%
!!! AGACAGGTTTGCTTTTTCCT+TGG - chr5.4:6242484-6242503 MS.gene015458:CDS 40.0%
!!! GACTTTGAAGGGTGTTTTAG+AGG - chr5.4:6240630-6240649 MS.gene015458:intron 40.0%
!!! GGAGCATCTTCACTTTTTCT+AGG + chr5.4:6240755-6240774 None:intergenic 40.0%
AATACAGGACGTGATTGGTG+GGG + chr5.4:6238782-6238801 None:intergenic 45.0%
AATCTCTCGAACAGACCCTT+AGG - chr5.4:6240445-6240464 MS.gene015458:intron 45.0%
AATTGCTTGAAGGGGTTCGA+AGG - chr5.4:6242154-6242173 MS.gene015458:CDS 45.0%
ACAAGGAAAGGAACTGCCAT+GGG - chr5.4:6241445-6241464 MS.gene015458:intron 45.0%
ACAGGAACATACCAAGAACC+CGG - chr5.4:6242605-6242624 MS.gene015458:CDS 45.0%
ACTGTGCTATCTCGATGCAA+AGG - chr5.4:6239801-6239820 MS.gene015458:CDS 45.0%
AGGAACTGCCATGGGTAAAA+CGG - chr5.4:6241453-6241472 MS.gene015458:intron 45.0%
ATATGTCATGCAAGGTGAGG+AGG + chr5.4:6240551-6240570 None:intergenic 45.0%
ATCCAAAAGCTGATCAGTGC+CGG - chr5.4:6242642-6242661 MS.gene015458:CDS 45.0%
ATCTCTTGGTCTGATCTTCC+AGG - chr5.4:6241652-6241671 MS.gene015458:intron 45.0%
ATTGGTGGGGGAAAGATTGA+TGG + chr5.4:6238769-6238788 None:intergenic 45.0%
CAACCAGGAATTGCTTGAAG+GGG - chr5.4:6242146-6242165 MS.gene015458:CDS 45.0%
CGATCCAAATTTGGCTGATG+AGG - chr5.4:6241612-6241631 MS.gene015458:intron 45.0%
CTCCAGTGTGATTAGATTCC+AGG + chr5.4:6240921-6240940 None:intergenic 45.0%
CTCTCCTCATCAGCCAAATT+TGG + chr5.4:6241619-6241638 None:intergenic 45.0%
CTGTAACCCTTTGACCAATC+AGG + chr5.4:6238885-6238904 None:intergenic 45.0%
CTGTGCTATCTCGATGCAAA+GGG - chr5.4:6239802-6239821 MS.gene015458:CDS 45.0%
GAATACAGGACGTGATTGGT+GGG + chr5.4:6238783-6238802 None:intergenic 45.0%
GATAGTCCCCCTAACTCAAA+TGG + chr5.4:6240366-6240385 None:intergenic 45.0%
GCTGATGAGGAGAGAGAAAA+AGG - chr5.4:6241625-6241644 MS.gene015458:intron 45.0%
GGATGCTAAGTGCAATAAGC+AGG + chr5.4:6241115-6241134 None:intergenic 45.0%
GGCAATGCCTGAAGGTTTAA+AGG - chr5.4:6241990-6242009 MS.gene015458:CDS 45.0%
GTATAACCCTTGGTGAAGGT+CGG + chr5.4:6242042-6242061 None:intergenic 45.0%
GTCTCATAACAGGGTCTTGA+AGG + chr5.4:6242468-6242487 None:intergenic 45.0%
GTCTCCCATTCAAAGCCTTA+AGG - chr5.4:6240828-6240847 MS.gene015458:intron 45.0%
GTTGGAATACAGGACGTGAT+TGG + chr5.4:6238787-6238806 None:intergenic 45.0%
TATCACCACTTCCAAGTACC+AGG + chr5.4:6240095-6240114 None:intergenic 45.0%
TATGAGAGAAGGGGAAGAGA+AGG + chr5.4:6240426-6240445 None:intergenic 45.0%
TCAAGACCCTGTTATGAGAC+AGG - chr5.4:6242468-6242487 MS.gene015458:CDS 45.0%
TGAAGAGTTGAAGGAGAGAC+AGG - chr5.4:6242319-6242338 MS.gene015458:CDS 45.0%
TGATGGCATCTGAGAAGTGA+CGG + chr5.4:6238752-6238771 None:intergenic 45.0%
TGGAAATAGAGGCTAGGAGA+AGG + chr5.4:6241699-6241718 None:intergenic 45.0%
TGTCTCTCCTTCAACTCTTC+AGG + chr5.4:6242320-6242339 None:intergenic 45.0%
TGTGCTATCTCGATGCAAAG+GGG - chr5.4:6239803-6239822 MS.gene015458:CDS 45.0%
TTGCAGCCAAAAAGGGAAAC+TGG + chr5.4:6242224-6242243 None:intergenic 45.0%
TTGCATTCAGGTCGTCCTTA+TGG - chr5.4:6241882-6241901 MS.gene015458:CDS 45.0%
TTGTTCCTGGTACTTGGAAG+TGG - chr5.4:6240087-6240106 MS.gene015458:intron 45.0%
! AACTGCCCATTTGAGTTAGG+GGG - chr5.4:6240357-6240376 MS.gene015458:intron 45.0%
! CCAATCAGGTTTGAGTTCGA+CGG + chr5.4:6238871-6238890 None:intergenic 45.0%
! GCAAGAGCTTTGACAAGGAA+AGG - chr5.4:6241433-6241452 MS.gene015458:intron 45.0%
! TAACCGTGCTGCTGTATACT+TGG - chr5.4:6239559-6239578 MS.gene015458:CDS 45.0%
! TGAGTTTCTTCAGGGTGTCT+GGG + chr5.4:6241546-6241565 None:intergenic 45.0%
! TTGAGTTTCTTCAGGGTGTC+TGG + chr5.4:6241547-6241566 None:intergenic 45.0%
! TTTTTCTGGACCGGAGATGT+GGG - chr5.4:6239091-6239110 MS.gene015458:intron 45.0%
!! GAAGGCTTTGGATAAAAGGG+AGG + chr5.4:6240408-6240427 None:intergenic 45.0%
!! GCAGGTATTGGTTGATTTCC+AGG - chr5.4:6242566-6242585 MS.gene015458:CDS 45.0%
!! TAAGGCTTTGAATGGGAGAC+TGG + chr5.4:6240828-6240847 None:intergenic 45.0%
!!! CCGTTTGGTGATGCTTTTTC+TGG - chr5.4:6239077-6239096 MS.gene015458:intron 45.0%
!!! GCATTTTGCCGTTTTACCCA+TGG + chr5.4:6241464-6241483 None:intergenic 45.0%
!!! TGGTGATGCTTTTTCTGGAC+CGG - chr5.4:6239082-6239101 MS.gene015458:intron 45.0%
AAAACTGAACCGCACCCTTC+CGG + chr5.4:6242065-6242084 None:intergenic 50.0%
ACCAAGGGTTATACCCGGAA+GGG - chr5.4:6242048-6242067 MS.gene015458:CDS 50.0%
AGAAGGGGAAGAGAAGGCTT+TGG + chr5.4:6240420-6240439 None:intergenic 50.0%
AGGAGAAGGAAGTGAAGCAG+AGG - chr5.4:6239411-6239430 MS.gene015458:intron 50.0%
AGGAGTTACATCTCCACGAC+TGG + chr5.4:6242300-6242319 None:intergenic 50.0%
ATACAGCAGCACGGTTAGTG+AGG + chr5.4:6239556-6239575 None:intergenic 50.0%
ATACAGGACGTGATTGGTGG+GGG + chr5.4:6238781-6238800 None:intergenic 50.0%
CACTGGGAGAGGACTTTGAA+GGG - chr5.4:6240619-6240638 MS.gene015458:intron 50.0%
CAGGAACATACCAAGAACCC+GGG - chr5.4:6242606-6242625 MS.gene015458:CDS 50.0%
CCGTCGAACTCAAACCTGAT+TGG - chr5.4:6238868-6238887 MS.gene015458:intron 50.0%
CCTTCACCAAGGGTTATACC+CGG - chr5.4:6242043-6242062 MS.gene015458:CDS 50.0%
CTTGATCCGACCTTCACCAA+GGG - chr5.4:6242033-6242052 MS.gene015458:CDS 50.0%
CTTGCAGGAAATGAAGAGCC+TGG + chr5.4:6241673-6241692 None:intergenic 50.0%
GAACCCCTTCAAGCAATTCC+TGG + chr5.4:6242152-6242171 None:intergenic 50.0%
GAAGGAAGTGAAGCAGAGGA+AGG - chr5.4:6239415-6239434 MS.gene015458:intron 50.0%
GACAAGGAAAGGAACTGCCA+TGG - chr5.4:6241444-6241463 MS.gene015458:intron 50.0%
GAGGATGCCAAATACTCTGC+TGG + chr5.4:6241042-6241061 None:intergenic 50.0%
GGAATACAGGACGTGATTGG+TGG + chr5.4:6238784-6238803 None:intergenic 50.0%
GGATAATCCTAAGGCTGCAC+AGG - chr5.4:6242587-6242606 MS.gene015458:CDS 50.0%
GTAAGTTTCGCCCACATCTC+CGG + chr5.4:6239104-6239123 None:intergenic 50.0%
GTATGTTCCTGTGCAGCCTT+AGG + chr5.4:6242597-6242616 None:intergenic 50.0%
GTGCAGCCTTAGGATTATCC+TGG + chr5.4:6242587-6242606 None:intergenic 50.0%
TCAAAGGGTTACAGCCGTCT+CGG - chr5.4:6238891-6238910 MS.gene015458:CDS 50.0%
TGAATGGGAGACTGGAGAGA+GGG + chr5.4:6240820-6240839 None:intergenic 50.0%
TGGATCTTGTCCATCACACC+CGG + chr5.4:6242627-6242646 None:intergenic 50.0%
TTGAATGGGAGACTGGAGAG+AGG + chr5.4:6240821-6240840 None:intergenic 50.0%
! CTTTTTCTGGACCGGAGATG+TGG - chr5.4:6239090-6239109 MS.gene015458:intron 50.0%
! GGTGCTCTGTAAGCGCTTTT+TGG + chr5.4:6241519-6241538 None:intergenic 50.0%
! TCTTCAGGGTGTCTGGGTTA+CGG + chr5.4:6241540-6241559 None:intergenic 50.0%
! TGGAAGAGGTGGTGATGATG+TGG - chr5.4:6239271-6239290 MS.gene015458:CDS 50.0%
!! ATCTGAGAAGTGACGGATGG+CGG + chr5.4:6238745-6238764 None:intergenic 50.0%
!! GCCTTTGGCTTTAGCTTCGT+CGG + chr5.4:6238691-6238710 None:intergenic 50.0%
!!! TTCCGGCACTGATCAGCTTT+TGG + chr5.4:6242647-6242666 None:intergenic 50.0%
AAACTGAACCGCACCCTTCC+GGG + chr5.4:6242064-6242083 None:intergenic 55.0%
AAACTGGGGGCAATGCCTGA+AGG - chr5.4:6241982-6242001 MS.gene015458:CDS 55.0%
AATGGAGGAGGTGGCTGATG+AGG - chr5.4:6239391-6239410 MS.gene015458:CDS 55.0%
ACCCTTCCGGGTATAACCCT+TGG + chr5.4:6242052-6242071 None:intergenic 55.0%
AGCAGCACGGTTAGTGAGGA+AGG + chr5.4:6239552-6239571 None:intergenic 55.0%
AGCCGATGCTCAAAAAGCCG+CGG - chr5.4:6239013-6239032 MS.gene015458:intron 55.0%
AGCTCTCTTCCTCTCCGAAC+TGG + chr5.4:6239315-6239334 None:intergenic 55.0%
AGTGAAGCAGAGGAAGGCTG+AGG - chr5.4:6239421-6239440 MS.gene015458:intron 55.0%
ATATGCCGTCCAGTTCGGAG+AGG - chr5.4:6239303-6239322 MS.gene015458:CDS 55.0%
CACCAAGGGTTATACCCGGA+AGG - chr5.4:6242047-6242066 MS.gene015458:CDS 55.0%
CAGCGGATCGGTTGGAATAC+AGG + chr5.4:6238797-6238816 None:intergenic 55.0%
CCGGGTATAACCCTTGGTGA+AGG + chr5.4:6242046-6242065 None:intergenic 55.0%
CTCTTCCTCTCCGAACTGGA+CGG + chr5.4:6239311-6239330 None:intergenic 55.0%
GAAGAGAGCTGCTGAACCTG+AGG - chr5.4:6239325-6239344 MS.gene015458:CDS 55.0%
GCACTGGGAGAGGACTTTGA+AGG - chr5.4:6240618-6240637 MS.gene015458:intron 55.0%
GCCGACGAAGCTAAAGCCAA+AGG - chr5.4:6238687-6238706 MS.gene015458:CDS 55.0%
GCCTGATATGCCGTCCAGTT+CGG - chr5.4:6239298-6239317 MS.gene015458:CDS 55.0%
GCTAGGAGAAGGATGCTTGC+AGG + chr5.4:6241688-6241707 None:intergenic 55.0%
GCTTGATCCGACCTTCACCA+AGG - chr5.4:6242032-6242051 MS.gene015458:CDS 55.0%
GGAGAATGCAGCGTTGCCTT+TGG + chr5.4:6238706-6238725 None:intergenic 55.0%
GGATCTTGTCCATCACACCC+GGG + chr5.4:6242626-6242645 None:intergenic 55.0%
TACCAAGAACCCGGGTGTGA+TGG - chr5.4:6242614-6242633 MS.gene015458:CDS 55.0%
TCATCAGCCACCTCCTCCAT+TGG + chr5.4:6239392-6239411 None:intergenic 55.0%
TCCGAACTGGACGGCATATC+AGG + chr5.4:6239302-6239321 None:intergenic 55.0%
TGAACCTGAGGTGGCAAAGC+AGG - chr5.4:6239337-6239356 MS.gene015458:CDS 55.0%
! GGCATCTGAGAAGTGACGGA+TGG + chr5.4:6238748-6238767 None:intergenic 55.0%
!! TCACCAAACGGATTGGCACC+CGG + chr5.4:6239068-6239087 None:intergenic 55.0%
ACCTGAGGTGGCAAAGCAGG+CGG - chr5.4:6239340-6239359 MS.gene015458:CDS 60.0%
ATGGGAGACTGGAGAGAGGG+AGG + chr5.4:6240817-6240836 None:intergenic 60.0%
CCTAGAAAAACTCGCCGCCG+CGG + chr5.4:6239033-6239052 None:intergenic 60.0%
CGATGCTCAAAAAGCCGCGG+CGG - chr5.4:6239016-6239035 MS.gene015458:intron 60.0%
GAGAGCTGCTGAACCTGAGG+TGG - chr5.4:6239328-6239347 MS.gene015458:CDS 60.0%
GGAGGTGGCTGATGAGGAGA+AGG - chr5.4:6239397-6239416 MS.gene015458:intron 60.0%
GGCAACGCTGCATTCTCCTC+CGG - chr5.4:6238708-6238727 MS.gene015458:CDS 60.0%
GGGCGAAGGGGGTAGAGAAT+AGG + chr5.4:6240776-6240795 None:intergenic 60.0%
GGGTTATACCCGGAAGGGTG+CGG - chr5.4:6242053-6242072 MS.gene015458:CDS 60.0%
GTCCATCACACCCGGGTTCT+TGG + chr5.4:6242619-6242638 None:intergenic 60.0%
TGAGGCGCAGAAGGAGAAGG+AGG - chr5.4:6239439-6239458 MS.gene015458:intron 60.0%
TGGGAGACTGGAGAGAGGGA+GGG + chr5.4:6240816-6240835 None:intergenic 60.0%
TTCTAGGCCACGTTCTGCGC+CGG - chr5.4:6239046-6239065 MS.gene015458:CDS 60.0%
! CAAGATGAGCGGCACCGAGA+CGG + chr5.4:6238908-6238927 None:intergenic 60.0%
! CTGGAGAGAAGCGTGAGCAG+CGG + chr5.4:6238814-6238833 None:intergenic 60.0%
! GAGAAGCGTGAGCAGCGGAT+CGG + chr5.4:6238809-6238828 None:intergenic 60.0%
! GATGGCGGTTGCGAAATCGC+CGG + chr5.4:6238730-6238749 None:intergenic 60.0%
!! CGCCGCGGCTTTTTGAGCAT+CGG + chr5.4:6239018-6239037 None:intergenic 60.0%
!! TCCTCCATTGGCTCCGGTTC+CGG + chr5.4:6239380-6239399 None:intergenic 60.0%
ACCGGAGCCAATGGAGGAGG+TGG - chr5.4:6239382-6239401 MS.gene015458:CDS 65.0%
AGCGTGAGCAGCGGATCGGT+TGG + chr5.4:6238805-6238824 None:intergenic 65.0%
AGGGGACGGAGGAGGGCTTT+GGG + chr5.4:6240797-6240816 None:intergenic 65.0%
GACTGGAGAGAGGGAGGGGA+CGG + chr5.4:6240811-6240830 None:intergenic 65.0%
GAGGAAGGCTGAGGCGCAGA+AGG - chr5.4:6239430-6239449 MS.gene015458:intron 65.0%
GCGCAGAAGGAGAAGGAGGC+TGG - chr5.4:6239443-6239462 MS.gene015458:intron 65.0%
GGAACCGGAGCCAATGGAGG+AGG - chr5.4:6239379-6239398 MS.gene015458:CDS 65.0%
GGCTGAGGCGCAGAAGGAGA+AGG - chr5.4:6239436-6239455 MS.gene015458:intron 65.0%
GGGAGACTGGAGAGAGGGAG+GGG + chr5.4:6240815-6240834 None:intergenic 65.0%
GGTTGAGCCTGAGCCGGAAC+CGG - chr5.4:6239364-6239383 MS.gene015458:CDS 65.0%
TCCGCCTGCTTTGCCACCTC+AGG + chr5.4:6239344-6239363 None:intergenic 65.0%
TCTAGGCCACGTTCTGCGCC+GGG - chr5.4:6239047-6239066 MS.gene015458:CDS 65.0%
TGAGCCGGAACCGGAGCCAA+TGG - chr5.4:6239373-6239392 MS.gene015458:CDS 65.0%
TGAGGTGGCAAAGCAGGCGG+AGG - chr5.4:6239343-6239362 MS.gene015458:CDS 65.0%
! ATTGGCTCCGGTTCCGGCTC+AGG + chr5.4:6239374-6239393 None:intergenic 65.0%
! CCGCGGCGGCGAGTTTTTCT+AGG - chr5.4:6239030-6239049 MS.gene015458:CDS 65.0%
!! AGGAGGGCTTTGGGGCGAAG+GGG + chr5.4:6240788-6240807 None:intergenic 65.0%
!! CGTCTCGGTGCCGCTCATCT+TGG - chr5.4:6238906-6238925 MS.gene015458:CDS 65.0%
!! GAGGAGGGCTTTGGGGCGAA+GGG + chr5.4:6240789-6240808 None:intergenic 65.0%
!! GCCACCTCCTCCATTGGCTC+CGG + chr5.4:6239386-6239405 None:intergenic 65.0%
AGAGAGGGAGGGGACGGAGG+AGG + chr5.4:6240805-6240824 None:intergenic 70.0%
GAGAGGGAGGGGACGGAGGA+GGG + chr5.4:6240804-6240823 None:intergenic 70.0%
GAGGGGACGGAGGAGGGCTT+TGG + chr5.4:6240798-6240817 None:intergenic 70.0%
GCCGGAACCGGAGCCAATGG+AGG - chr5.4:6239376-6239395 MS.gene015458:CDS 70.0%
GCGCCGGGTGCCAATCCGTT+TGG - chr5.4:6239062-6239081 MS.gene015458:CDS 70.0%
GGCGGAGGTTGAGCCTGAGC+CGG - chr5.4:6239358-6239377 MS.gene015458:CDS 70.0%
GGCGGTTGCGAAATCGCCGG+AGG + chr5.4:6238727-6238746 None:intergenic 70.0%
GGGGACGGAGGAGGGCTTTG+GGG + chr5.4:6240796-6240815 None:intergenic 70.0%
TGGAGAGAGGGAGGGGACGG+AGG + chr5.4:6240808-6240827 None:intergenic 70.0%
TTGGCACCCGGCGCAGAACG+TGG + chr5.4:6239056-6239075 None:intergenic 70.0%
!! GGAGGAGGGCTTTGGGGCGA+AGG + chr5.4:6240790-6240809 None:intergenic 70.0%
!! GGAGGGCTTTGGGGCGAAGG+GGG + chr5.4:6240787-6240806 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 6238684 6242683 6238684 ID=MS.gene015458
chr5.4 mRNA 6238684 6242683 6238684 ID=MS.gene015458.t1;Parent=MS.gene015458
chr5.4 exon 6241775 6242683 6241775 ID=MS.gene015458.t1.exon1;Parent=MS.gene015458.t1
chr5.4 CDS 6241775 6242683 6241775 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
chr5.4 exon 6239721 6240009 6239721 ID=MS.gene015458.t1.exon2;Parent=MS.gene015458.t1
chr5.4 CDS 6239721 6240009 6239721 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
chr5.4 exon 6239499 6239584 6239499 ID=MS.gene015458.t1.exon3;Parent=MS.gene015458.t1
chr5.4 CDS 6239499 6239584 6239499 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
chr5.4 exon 6239192 6239415 6239192 ID=MS.gene015458.t1.exon4;Parent=MS.gene015458.t1
chr5.4 CDS 6239192 6239415 6239192 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
chr5.4 exon 6239027 6239093 6239027 ID=MS.gene015458.t1.exon5;Parent=MS.gene015458.t1
chr5.4 CDS 6239027 6239093 6239027 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
chr5.4 exon 6238878 6238937 6238878 ID=MS.gene015458.t1.exon6;Parent=MS.gene015458.t1
chr5.4 CDS 6238878 6238937 6238878 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
chr5.4 exon 6238684 6238797 6238684 ID=MS.gene015458.t1.exon7;Parent=MS.gene015458.t1
chr5.4 CDS 6238684 6238797 6238684 ID=cds.MS.gene015458.t1;Parent=MS.gene015458.t1
Gene Sequence

>MS.gene015458

ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCTGCATTCTCCTCCGGCGATTTCGCAACCGCCATCCGTCACTTCTCAGATGCCATCAATCTTTCCCCCACCAATCACGTCCTGTATTCCAACCGATCCGCTGCTCACGCTTCTCTCCAGAATTACACTGACGCTTTAACCGATGCAAAGAAAACCGTCGAACTCAAACCTGATTGGTCAAAGGGTTACAGCCGTCTCGGTGCCGCTCATCTTGGTCTTTCTCAATACGACGAAGCTGTTTCAGCTTACAAGAAAGGGTTAGAAATTGATCCTAATAATGAACCCTTGAAATCAGGTTTAGCCGATGCTCAAAAAGCCGCGGCGGCGAGTTTTTCTAGGCCACGTTCTGCGCCGGGTGCCAATCCGTTTGGTGATGCTTTTTCTGGACCGGAGATGTGGGCGAAACTTACTGCTGATCCTACAACTAGGGTTTATCTTCAACAGCCTGATTTTGTGAAGATGATGCAAGATATTCAAAAGGATCCCAATAATTTGAATTTGTATTTGAAGGATCAGAGAGTTATGCAAGCTTTTGGGGTTTTGCTTAATGTTAAGATTGGAAGAGGTGGTGATGATGTGGATATGCCTGATATGCCGTCCAGTTCGGAGAGGAAGAGAGCTGCTGAACCTGAGGTGGCAAAGCAGGCGGAGGTTGAGCCTGAGCCGGAACCGGAGCCAATGGAGGAGGTGGCTGATGAGGAGAAGGAAGTGAAGCAGAGGAAGGCTGAGGCGCAGAAGGAGAAGGAGGCTGGTAATGCTGCGTATAAGAAGAAGGATTTTGATACCGCGATTCAGCATTATTCGAAAGCTTTGGAATTGGATGATGAGGATGTTTCCTTCCTCACTAACCGTGCTGCTGTATACTTGGAAATGGGAAAGGTATGAATTTTCCTATGTATATGTTTTTGACAAATATTTATCTACATGTATGCGTGTGTGTATATATGTATGTATGCATTGTGTTCCTATTGTTTGCTAATTACGCATTGTTCTATCTGAATTTAGTCTAGTTTCATTGCTAAGGTTATTTATTTGACTATAATTTTACTGCTTACTTGCTTAGTTATAGACTATAGTATATGGTCTAACTGTGCTATCTCGATGCAAAGGGGCAGTGTTTTTTAGTTTGACCCCATAGGTGAAATGTGTTAAATTTAGCCTGTTCTACTTTTTTCATAGGTGAAAAGGTGTTTAACTTGGTCTGTTGTGTACTTGTACTCAAAACTTGTCCTTTTAACTATTTCCAATTAAACCCCATGACAATTCCATTGAATTGATGTACTATCAAGTATATGAACCAAATTGAAAAGGCTATTATGTATTAGCCATGAAAATACATTATTTTGTTTTTTATGTGGGACAAGTATATTGATTTGTTCCTGGTACTTGGAAGTGGTGATAATACATCTTATTGTTAGACAGAACTATTGTTTTATGGAAGCTGGAAATTATCTCCCAAGTGTGTGATTAAACATACTTTTGTTTGTGGGTGATGCGTTGATATCTATGATGCTCTCAATTTATAGAGTGGGGCTTTACGCCTTATTTGAGAGAATGTTTGGGATTAATATATTTTTAATTTTGTGCGTATTATAATGATATAAGTATTGGATTTGAAGAATTTATCAAACTAAAGAAAAATTAACTGCCCATTTGAGTTAGGGGGACTATCCTTTCTACCATTTTCATTTCCTCCCTTTTATCCAAAGCCTTCTCTTCCCCTTCTCTCATAATCTCTCGAACAGACCCTTAGGCTTTAATTGGGAGTTTATAGGAGAATGAAGGAGAGAGTTTTTTGGATAAAAGAAGTAAATGGGAAGTTGTGACTGACTAGCCTCCTCACCTTGCATGACATATTTTTCTTCAATAGACTGAAACCCTAAAATATGCGGTAACTTAAAAATGCACTGGGAGAGGACTTTGAAGGGTGTTTTAGAGGATTTTGAATAAATTTTTAAATCCATTATTTTCTTTATTAGACTTTCAAAATGAAAAAAATATCGTCCATAAGATTTTCATTTTGATCCCTCAATACTCTCCTAGAAAAAGTGAAGATGCTCCTATTCTCTACCCCCTTCGCCCCAAAGCCCTCCTCCGTCCCCTCCCTCTCTCCAGTCTCCCATTCAAAGCCTTAAGGTTACCTTGGTACTGAAGGTTGTCTTTGGTTTATTATCATGAACTGCATGTCTTAGAAATTCTGTAATCCTGGAATCTAATCACACTGGAGTTAAATGACCCTTTAACAACCCCAATAATATTTTCAAGACTGCTGAGAATTTAGGATTTTATGTAGTTATGCCATTATATGCAAAATACTCTGATTTTCCAGCAGAGTATTTGGCATCCTCCAATAGTATTAGATATTTATGAAGTGTAAGTCTTGAGATCTATAATTATACCTGCTTATTGCACTTAGCATCCAAAACATAACAGCGGTTTTGTTGTTAAAGCTTGTTTCAGTGTTTGATGGTTACAGAACTTGGTCAAATTTTACTATGGTTTGAGTGTTTAAATAGGATTAGGAAGATTTCCTAGTGTTTGAATAGGATTAGGAAGAGAAAAATCTAAGGGTTTTTTAAAGTTAAGTCAAGGGACACTTCTTACCTGTAATGTATTTTGATAAATATTCCTTGAATCTTTTCAGTATGAGGATTGCATAAAAGATTGTGATAAGGCTGTTGAAAGAGGACGAGAGCTAAGAGCAGACTACAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCATGGGTAAAACGGCAAAATGCTCTAAAGATTATGAACCCGTCATTGAGACTTACCAAAAAGCGCTTACAGAGCACCGTAACCCAGACACCCTGAAGAAACTCAATGAAGCTGAGAAGGCCAAGAAAGAACTAGAACAACAAGAATACTTCGATCCAAATTTGGCTGATGAGGAGAGAGAAAAAGGTACTATCTCTTGGTCTGATCTTCCAGGCTCTTCATTTCCTGCAAGCATCCTTCTCCTAGCCTCTATTTCCACATTATTGTTTTGACTCAATCTTATTTGTAGACTGTGTTAATGTATGAAAACCTTGTCTTGCAGGGAATGAATACTTTAAGCAGCAGAAGTATCCTGAAGCTATTAAGCATTACACAGAGTCTATAAAAAGAAACCCGAAAAATCCTAAGGTAATAATACTCTTTGCATTCAGGTCGTCCTTATGGTTATGCTATCTGAATCCTAACATGTTCGAATACTCCATTTCTTTCAGGCTTATAGTAACAGAGCTGCATGTTACACAAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGTATTGAGCTTGATCCGACCTTCACCAAGGGTTATACCCGGAAGGGTGCGGTTCAGTTTTTCATGAAAGAATATGAAAAGGCTTTGGAAACATATCAGGAAGGGTTGAAACATGATGCAAACAACCAGGAATTGCTTGAAGGGGTTCGAAGGTACATATCATAGTGGTTAAAATCCCTGCAATGTGTTTAATACTTCCAGTTTCCCTTTTTGGCTGCAAATCATGTTTAACCATGTATATCCATTTCAGTTGTGTGAGGCAAATTAATAGAACCAGTCGTGGAGATGTAACTCCTGAAGAGTTGAAGGAGAGACAGGTTTGTCATATAGTGCCAAAATCTTTGCATTCAGAGATTATAATTTAAATATATATAATAATATATGCTGTATTTTGAATATTTTTTAGGCTAAGGCAATGGCAGATCCAGAGATTCAGAACATCCTTCAAGACCCTGTTATGAGACAGGTTTGCTTTTTCCTTGGCTTCATTGTGTATAATGTGCCACAGTAATAAGATGTGGTTATAATGGTTGGCTTTGTATGCAGGTATTGGTTGATTTCCAGGATAATCCTAAGGCTGCACAGGAACATACCAAGAACCCGGGTGTGATGGACAAGATCCAAAAGCTGATCAGTGCCGGAATTGTCCAGATGAAGTAA
Protein sequence

>MS.gene015458.t1

MADEAKAKGNAAFSSGDFATAIRHFSDAINLSPTNHVLYSNRSAAHASLQNYTDALTDAKKTVELKPDWSKGYSRLGAAHLGLSQYDEAVSAYKKGLEIDPNNEPLKSGLADAQKAAAASFSRPRSAPGANPFGDAFSGPEMWAKLTADPTTRVYLQQPDFVKMMQDIQKDPNNLNLYLKDQRVMQAFGVLLNVKIGRGGDDVDMPDMPSSSERKRAAEPEVAKQAEVEPEPEPEPMEEVADEEKEVKQRKAEAQKEKEAGNAAYKKKDFDTAIQHYSKALELDDEDVSFLTNRAAVYLEMGKYEDCIKDCDKAVERGRELRADYKMIARALTRKGTAMGKTAKCSKDYEPVIETYQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPNLADEEREKGNEYFKQQKYPEAIKHYTESIKRNPKNPKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKALETYQEGLKHDANNQELLEGVRSCVRQINRTSRGDVTPEELKERQAKAMADPEIQNILQDPVMRQVLVDFQDNPKAAQEHTKNPGVMDKIQKLISAGIVQMK