AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75493


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75493.t1 MTR_3g087030 98.858 438 5 0 1 438 1 438 0.0 890
MS.gene75493.t1 MTR_2g104030 48.744 398 188 5 41 428 34 425 2.17e-129 383
MS.gene75493.t1 MTR_6g471050 44.512 328 173 3 109 428 8 334 6.77e-88 275
MS.gene75493.t1 MTR_3g027580 40.845 355 184 8 82 427 89 426 3.40e-71 231
MS.gene75493.t1 MTR_4g023470 38.736 364 208 6 61 422 71 421 2.66e-70 229
MS.gene75493.t1 MTR_5g065160 34.140 372 211 10 79 434 79 432 3.08e-63 211
MS.gene75493.t1 MTR_5g065160 34.140 372 211 10 79 434 80 433 3.12e-63 211
MS.gene75493.t1 MTR_5g065160 34.140 372 211 10 79 434 80 433 5.83e-63 211
MS.gene75493.t1 MTR_5g065160 34.140 372 211 10 79 434 73 426 6.04e-63 210
MS.gene75493.t1 MTR_8g006430 34.615 338 205 9 83 411 15 345 2.54e-52 181
MS.gene75493.t1 MTR_4g023490 34.584 373 201 11 75 425 9 360 1.52e-51 178
MS.gene75493.t1 MTR_2g087660 31.909 351 220 9 83 423 14 355 2.03e-38 144
MS.gene75493.t1 MTR_4g050420 33.524 349 215 9 83 423 14 353 1.73e-37 141
MS.gene75493.t1 MTR_7g109340 31.412 347 203 12 83 425 27 342 1.81e-34 131
MS.gene75493.t1 MTR_2g087660 33.103 290 180 7 83 366 14 295 6.50e-32 124
MS.gene75493.t1 MTR_3g108020 28.863 343 213 11 81 419 3 318 5.13e-30 119
MS.gene75493.t1 MTR_2g014470 61.039 77 24 2 81 153 3 77 4.99e-21 94.0
MS.gene75493.t1 MTR_2g014480 51.961 102 36 4 82 180 4 95 2.95e-20 91.7
MS.gene75493.t1 MTR_4g078850 53.763 93 32 3 81 164 3 93 5.39e-20 91.3
MS.gene75493.t1 MTR_7g069480 54.667 75 32 1 82 156 27 99 1.45e-18 88.6
MS.gene75493.t1 MTR_4g015840 54.054 74 32 1 81 152 3 76 2.81e-18 85.9
MS.gene75493.t1 MTR_2g090705 53.333 75 33 1 81 153 3 77 9.64e-18 84.3
MS.gene75493.t1 MTR_7g085600 57.143 63 27 0 82 144 54 116 2.86e-16 79.7
MS.gene75493.t1 MTR_1g110310 58.571 70 28 1 82 150 16 85 2.55e-15 77.8
MS.gene75493.t1 MTR_7g101070 55.385 65 27 1 82 144 358 422 5.03e-15 77.4
MS.gene75493.t1 MTR_2g436560 37.500 104 60 1 77 175 99 202 7.82e-15 75.9
MS.gene75493.t1 MTR_2g097690 33.516 182 70 7 38 198 11 162 2.64e-14 72.0
MS.gene75493.t1 MTR_3g437850 45.679 81 37 2 82 159 2 78 3.01e-14 70.9
MS.gene75493.t1 MTR_2g436580 49.296 71 35 1 74 144 103 172 3.72e-14 72.0
MS.gene75493.t1 MTR_2g097690 39.370 127 55 4 38 143 11 136 7.40e-14 72.0
MS.gene75493.t1 MTR_5g035770 57.576 66 27 1 82 146 25 90 1.01e-13 73.2
MS.gene75493.t1 MTR_3g437360 51.389 72 33 1 82 151 5 76 1.13e-13 72.4
MS.gene75493.t1 MTR_7g112360 47.945 73 29 3 83 150 17 85 1.51e-13 67.4
MS.gene75493.t1 MTR_7g112360 48.485 66 29 2 83 143 17 82 2.84e-13 67.8
MS.gene75493.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 3.37e-13 68.9
MS.gene75493.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 4.17e-13 68.2
MS.gene75493.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 4.70e-13 68.6
MS.gene75493.t1 MTR_7g069480 48.000 75 31 2 82 156 27 93 6.46e-13 70.9
MS.gene75493.t1 MTR_5g012530 41.250 80 43 1 82 157 12 91 6.80e-13 70.9
MS.gene75493.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 9.15e-13 68.2
MS.gene75493.t1 MTR_6g027030 42.045 88 38 2 82 163 2 82 9.66e-13 67.8
MS.gene75493.t1 MTR_8g037810 52.174 69 32 1 83 150 7 75 1.85e-12 68.6
MS.gene75493.t1 MTR_5g004570 45.833 72 38 1 80 150 4 75 2.11e-12 67.4
MS.gene75493.t1 MTR_6g027110 43.529 85 35 2 82 160 2 79 2.39e-12 64.7
MS.gene75493.t1 MTR_1g052110 53.030 66 26 2 84 146 40 103 2.69e-12 67.4
MS.gene75493.t1 MTR_6g026940 44.118 68 32 1 82 143 2 69 8.47e-12 63.9
MS.gene75493.t1 MTR_1g105540 48.387 62 32 0 82 143 35 96 1.66e-11 65.5
MS.gene75493.t1 MTR_6g059870 40.964 83 48 1 77 158 61 143 3.63e-11 65.9
MS.gene75493.t1 MTR_8g081620 38.889 72 41 1 76 144 54 125 4.35e-11 62.4
MS.gene75493.t1 MTR_1g060440 31.690 142 86 2 80 221 65 195 6.73e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75493.t1 AT2G22360 72.210 439 115 5 1 434 1 437 0.0 654
MS.gene75493.t1 AT4G39960 67.929 449 131 5 1 438 1 447 0.0 620
MS.gene75493.t1 AT4G39960 67.929 449 131 5 1 438 1 447 0.0 620
MS.gene75493.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.54e-125 373
MS.gene75493.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.96e-125 373
MS.gene75493.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.96e-125 373
MS.gene75493.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.96e-125 373
MS.gene75493.t1 AT3G17830 46.076 395 196 6 42 425 29 417 1.75e-106 325
MS.gene75493.t1 AT5G48030 39.948 383 208 8 60 432 75 445 3.69e-76 245
MS.gene75493.t1 AT1G28210 33.994 353 211 6 82 427 48 385 1.12e-57 195
MS.gene75493.t1 AT1G28210 33.994 353 211 6 82 427 48 385 1.13e-57 195
MS.gene75493.t1 AT1G28210 33.994 353 211 6 82 427 48 385 1.93e-57 195
MS.gene75493.t1 AT5G22060 32.676 355 212 10 83 423 15 356 9.13e-43 155
MS.gene75493.t1 AT3G44110 32.782 363 220 11 83 434 15 364 4.24e-40 149
MS.gene75493.t1 AT3G44110 32.024 331 203 10 83 402 15 334 4.79e-34 130
MS.gene75493.t1 AT3G62600 29.577 355 217 11 75 425 19 344 2.05e-30 120
MS.gene75493.t1 AT5G01390 25.706 354 230 9 81 425 3 332 1.53e-29 118
MS.gene75493.t1 AT3G08910 27.568 370 190 13 81 425 3 319 2.00e-26 109
MS.gene75493.t1 AT3G08970 56.250 80 33 1 81 160 26 103 1.60e-20 94.7
MS.gene75493.t1 AT3G08970 56.250 80 33 1 81 160 26 103 1.60e-20 94.7
MS.gene75493.t1 AT5G25530 48.039 102 44 3 82 174 4 105 5.33e-20 91.3
MS.gene75493.t1 AT4G28480 54.054 74 32 1 82 153 4 77 2.71e-18 85.5
MS.gene75493.t1 AT4G28480 26.897 145 102 3 282 425 147 288 2.89e-11 64.7
MS.gene75493.t1 AT2G20560 50.000 88 40 2 81 164 3 90 3.37e-18 85.9
MS.gene75493.t1 AT2G20560 25.185 135 99 2 292 425 202 335 6.49e-12 67.0
MS.gene75493.t1 AT4G28480 54.054 74 32 1 82 153 4 77 4.65e-18 85.5
MS.gene75493.t1 AT5G25530 44.545 110 44 4 82 174 4 113 2.02e-17 83.6
MS.gene75493.t1 AT1G10350 49.333 75 36 1 81 153 3 77 6.48e-17 82.0
MS.gene75493.t1 AT1G10350 31.538 130 84 4 292 419 213 339 7.69e-11 63.9
MS.gene75493.t1 AT5G01390 52.778 72 32 1 81 150 3 74 7.98e-17 80.1
MS.gene75493.t1 AT5G01390 53.521 71 31 1 82 150 4 74 9.75e-17 79.7
MS.gene75493.t1 AT5G01390 52.778 72 32 1 81 150 3 74 1.45e-16 80.1
MS.gene75493.t1 AT3G47940 52.703 74 32 1 81 151 3 76 2.49e-16 80.5
MS.gene75493.t1 AT3G47940 24.865 185 131 5 238 419 160 339 6.49e-12 67.0
MS.gene75493.t1 AT1G59725 50.000 76 35 1 81 153 3 78 5.13e-16 79.3
MS.gene75493.t1 AT1G59725 27.692 130 90 3 292 419 194 321 4.74e-11 64.3
MS.gene75493.t1 AT1G59980 59.375 64 25 1 84 146 25 88 2.40e-15 77.8
MS.gene75493.t1 AT5G59610 46.753 77 41 0 66 142 57 133 3.27e-15 75.9
MS.gene75493.t1 AT1G59980 59.375 64 25 1 84 146 25 88 3.67e-15 77.4
MS.gene75493.t1 AT5G18140 52.381 63 30 0 82 144 77 139 6.21e-15 75.9
MS.gene75493.t1 AT1G56300 48.529 68 30 2 81 143 12 79 6.79e-15 71.2
MS.gene75493.t1 AT5G59610 46.753 77 41 0 66 142 57 133 7.94e-15 74.7
MS.gene75493.t1 AT5G59610 46.753 77 41 0 66 142 57 133 7.94e-15 74.7
MS.gene75493.t1 AT5G59610 46.753 77 41 0 66 142 57 133 8.67e-15 74.7
MS.gene75493.t1 AT5G59610 46.753 77 41 0 66 142 57 133 8.67e-15 74.7
MS.gene75493.t1 AT1G56300 50.000 66 28 2 83 143 14 79 1.55e-14 71.2
MS.gene75493.t1 AT2G41000 44.086 93 41 3 81 167 2 89 3.26e-14 72.0
MS.gene75493.t1 AT3G57340 38.095 105 56 2 77 172 108 212 4.36e-14 73.9
MS.gene75493.t1 AT3G57340 38.095 105 56 2 77 172 108 212 4.36e-14 73.9
MS.gene75493.t1 AT5G49060 49.315 73 36 1 74 146 92 163 5.97e-14 73.2
MS.gene75493.t1 AT5G49060 49.315 73 36 1 74 146 92 163 5.97e-14 73.2
MS.gene75493.t1 AT5G05750 35.185 108 62 1 77 176 109 216 6.16e-14 72.4
MS.gene75493.t1 AT2G41000 44.565 92 40 3 82 167 3 89 7.93e-14 70.1
MS.gene75493.t1 AT1G24120 56.061 66 28 1 82 146 20 85 1.14e-13 73.2
MS.gene75493.t1 AT1G68370 54.286 70 31 1 82 150 17 86 1.89e-13 72.0
MS.gene75493.t1 AT5G03160 50.769 65 30 1 82 144 370 434 2.95e-13 72.0
MS.gene75493.t1 AT4G39150 35.833 120 69 3 80 196 4 118 2.98e-13 71.2
MS.gene75493.t1 AT4G39150 35.833 120 69 3 80 196 4 118 2.98e-13 71.2
MS.gene75493.t1 AT4G39150 35.833 120 69 3 80 196 4 118 2.98e-13 71.2
MS.gene75493.t1 AT4G13830 42.683 82 42 2 80 158 64 143 1.97e-12 66.2
MS.gene75493.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.09e-12 68.6
MS.gene75493.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.09e-12 68.6
MS.gene75493.t1 AT4G13830 42.683 82 42 2 80 158 64 143 2.19e-12 65.1
MS.gene75493.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.26e-12 68.6
MS.gene75493.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.26e-12 68.6
MS.gene75493.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.36e-12 68.2
MS.gene75493.t1 AT5G06910 38.043 92 51 2 84 174 31 117 5.52e-12 66.6
MS.gene75493.t1 AT4G13830 42.683 82 42 2 80 158 64 143 5.74e-12 65.1
MS.gene75493.t1 AT1G76700 48.611 72 36 1 80 150 4 75 5.83e-12 67.4
MS.gene75493.t1 AT5G16650 50.000 66 32 1 82 146 11 76 8.22e-12 62.8
MS.gene75493.t1 AT2G17880 40.909 88 46 3 79 163 65 149 1.21e-11 63.2
MS.gene75493.t1 AT2G35720 43.836 73 37 1 82 150 15 87 1.26e-11 67.0
MS.gene75493.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.62e-11 66.6
MS.gene75493.t1 AT5G16650 50.794 63 30 1 82 143 11 73 1.66e-11 63.2
MS.gene75493.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.90e-11 66.6
MS.gene75493.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.90e-11 66.6
MS.gene75493.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.90e-11 66.6
MS.gene75493.t1 AT1G21080 38.542 96 49 2 80 174 4 90 3.25e-11 65.1
MS.gene75493.t1 AT4G37480 46.154 65 32 1 84 145 58 122 3.33e-11 65.5
MS.gene75493.t1 AT1G21080 45.833 72 38 1 80 150 4 75 3.53e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene75493.t1 AT4G09350 41.772 79 44 1 67 143 91 169 4.97e-11 63.2
MS.gene75493.t1 AT2G25560 41.758 91 48 1 76 166 60 145 5.24e-11 65.1
MS.gene75493.t1 AT1G72070 44.262 61 32 1 73 133 30 88 5.40e-11 60.5
MS.gene75493.t1 AT4G36040 38.053 113 54 4 38 144 29 131 6.42e-11 61.2
MS.gene75493.t1 AT3G12170 34.188 117 64 4 66 174 24 135 7.67e-11 63.2
MS.gene75493.t1 AT1G72070 45.000 60 31 1 73 132 30 87 7.79e-11 58.9
MS.gene75493.t1 AT3G12170 38.043 92 51 3 84 174 13 99 9.96e-11 62.4

Find 137 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGATTCTGGTAGCCGTTTA+AGG 0.182163 3.3:-72563620 MS.gene75493:CDS
TTTGGGGAGGCAGGGCTTAA+AGG 0.247726 3.3:-72564176 MS.gene75493:CDS
CGGTCCATATATGACAAATT+TGG 0.261820 3.3:-72564194 MS.gene75493:CDS
TCACATCTGGATGATAATTT+CGG 0.265510 3.3:+72564716 None:intergenic
TACAAGCAGGATAAGCTTTA+TGG 0.275354 3.3:-72566390 MS.gene75493:CDS
GGTCCATATATGACAAATTT+GGG 0.277603 3.3:-72564193 MS.gene75493:CDS
CTCCCCAAATTTGTCATATA+TGG 0.277754 3.3:+72564190 None:intergenic
AATCTTGGGGACTACAATTA+AGG 0.292885 3.3:-72563457 MS.gene75493:CDS
CTTAAAGGTTCACCGGGATT+TGG 0.302482 3.3:-72564161 MS.gene75493:CDS
CTGTAAATGTTTCAGCTTAC+CGG 0.311527 3.3:-72564747 MS.gene75493:intron
GTCTTATATTGATGCAATCT+TGG 0.313538 3.3:-72563472 MS.gene75493:CDS
ACCCCTTGCAGTACATGTTC+TGG 0.319612 3.3:-72563696 MS.gene75493:CDS
GTTCCAGCCGGTGTGGATTC+TGG 0.326305 3.3:-72563633 MS.gene75493:CDS
TCTCGTTTAAGCACGGGATC+CGG 0.337729 3.3:+72563525 None:intergenic
CACATCTGGATGATAATTTC+GGG 0.342735 3.3:+72564717 None:intergenic
TGGTGCAGAAGAGAAATTTA+AGG 0.344525 3.3:-72564342 MS.gene75493:CDS
TCTTATATTGATGCAATCTT+GGG 0.353264 3.3:-72563471 MS.gene75493:CDS
TAGATGGCAGTTACACCTTT+TGG 0.360482 3.3:-72567915 MS.gene75493:CDS
TTCCAGAGTTACCTTCATTT+CGG 0.363610 3.3:+72563595 None:intergenic
CTTCATTTCGGACCCTTAAA+CGG 0.373498 3.3:+72563607 None:intergenic
CTTGGCTATTGTGGTGGATC+TGG 0.376282 3.3:+72567848 None:intergenic
ATTAAGGTTCCGACTGTAGA+TGG 0.378346 3.3:-72563441 MS.gene75493:CDS
GGATTCTGGTAGCCGTTTAA+GGG 0.391936 3.3:-72563619 MS.gene75493:CDS
TGTGGTACTTGCGATGGTTC+AGG 0.397485 3.3:-72563858 MS.gene75493:CDS
ATGTAACACATGTGGTGGTC+AGG 0.403113 3.3:-72563808 MS.gene75493:CDS
AGCGACTCAAACAGATCAAA+AGG 0.403699 3.3:+72564023 None:intergenic
GATAATTTCGGGCTAGCTTC+CGG 0.405239 3.3:+72564728 None:intergenic
AATACTCACTTGTTCACATC+TGG 0.408035 3.3:+72564703 None:intergenic
CTCGTTTAAGCACGGGATCC+GGG 0.419118 3.3:+72563526 None:intergenic
CAGGACTACTACACCGTCCT+TGG 0.424406 3.3:-72566102 MS.gene75493:CDS
ACCAGGATCAACACTTGTTA+TGG 0.426673 3.3:-72563385 MS.gene75493:CDS
TGCTGAATAAGAAGAATATG+AGG 0.439283 3.3:-72563344 MS.gene75493:CDS
GTGGATTTGAAAATCCCATC+TGG 0.440632 3.3:-72563414 MS.gene75493:CDS
CCCCTTGCAGTACATGTTCT+GGG 0.441535 3.3:-72563695 MS.gene75493:CDS
TATGACAAATTTGGGGAGGC+AGG 0.442220 3.3:-72564185 MS.gene75493:CDS
GTACATGTTCTGGGGATGGC+CGG 0.445163 3.3:-72563686 MS.gene75493:CDS
CATCTGGATGATTTAGTCCC+TGG 0.446833 3.3:+72563828 None:intergenic
ACTTTATGCTGCAGAGATCC+TGG 0.448540 3.3:-72564362 MS.gene75493:intron
CTGTTTGAGTCGCTATTTGA+GGG 0.452801 3.3:-72564014 MS.gene75493:CDS
AGGACTACTACACCGTCCTT+GGG 0.453339 3.3:-72566101 MS.gene75493:CDS
TAGTACATCAGCTACTCAAT+GGG 0.464566 3.3:-72567892 MS.gene75493:CDS
GGAAAGAAAGGTGGTTCTCC+TGG 0.465052 3.3:-72563576 MS.gene75493:CDS
TTAAATTTCTCTTCTGCACC+AGG 0.476100 3.3:+72564344 None:intergenic
ACCACCACATGTGTTACATC+TGG 0.476919 3.3:+72563812 None:intergenic
TGCTCGTCTTGCAATGGGAC+TGG 0.478835 3.3:-72563729 MS.gene75493:CDS
TGACTTGCTCGTCTTGCAAT+GGG 0.482426 3.3:-72563734 MS.gene75493:CDS
CGTTTAAGGGTCCGAAATGA+AGG 0.488601 3.3:-72563606 MS.gene75493:CDS
TCTGTTTGAGTCGCTATTTG+AGG 0.489195 3.3:-72564015 MS.gene75493:CDS
ATGACTTGCTCGTCTTGCAA+TGG 0.491631 3.3:-72563735 MS.gene75493:CDS
ATGGTCGCAGCAGACAATCT+TGG 0.494344 3.3:-72563986 MS.gene75493:CDS
TGCATCGTCGAAGGGGATCA+AGG 0.494975 3.3:-72566301 MS.gene75493:CDS
CTACCAGAATCCACACCGGC+TGG 0.495088 3.3:+72563630 None:intergenic
GAAGGTAACTCTGGAAAGAA+AGG 0.495407 3.3:-72563588 MS.gene75493:CDS
AAAGGTTCACCGGGATTTGG+TGG 0.502293 3.3:-72564158 MS.gene75493:CDS
GTTCTGGGGATGGCCGGGTG+AGG 0.503033 3.3:-72563680 MS.gene75493:CDS
TGTTGTTCTTGAAGTTATCC+CGG 0.507023 3.3:-72563544 MS.gene75493:CDS
TGGAAAAGGAGATAGAGATT+AGG 0.510570 3.3:-72563893 MS.gene75493:CDS
GGTGTCTTCTCGTTTAAGCA+CGG 0.510856 3.3:+72563518 None:intergenic
TACATGTTCTGGGGATGGCC+GGG 0.512446 3.3:-72563685 MS.gene75493:CDS
GTAGTACATCAGCTACTCAA+TGG 0.516566 3.3:-72567893 MS.gene75493:CDS
AAGGTTCACCGGGATTTGGT+GGG 0.517220 3.3:-72564157 MS.gene75493:CDS
TCTTGGAATGGAGCAATGAA+TGG 0.519565 3.3:-72563969 MS.gene75493:CDS
GTGTCTTCTCGTTTAAGCAC+GGG 0.522378 3.3:+72563519 None:intergenic
GATCCTGGTTGTGTCCCAGA+TGG 0.522621 3.3:+72563399 None:intergenic
ACTAAATCTGAAATTAAGAC+TGG 0.522708 3.3:-72566063 MS.gene75493:intron
TTTCTTGCAGTGCTACAAGC+AGG 0.523918 3.3:-72566403 MS.gene75493:intron
TGCAGTACATGTTCTGGGGA+TGG 0.526866 3.3:-72563690 MS.gene75493:CDS
GTGTCTTGATGATGCAAACT+TGG 0.526872 3.3:+72567830 None:intergenic
CACATGTGGTGGTCAGGGAC+GGG 0.527198 3.3:-72563802 MS.gene75493:CDS
GCCATAACAAGTGTTGATCC+TGG 0.527492 3.3:+72563384 None:intergenic
GGTTCACCGGGATTTGGTGG+GGG 0.527719 3.3:-72564155 MS.gene75493:CDS
AAAACTGATTGAGGAACTCT+CGG 0.528888 3.3:-72563262 MS.gene75493:CDS
TGAGTCGCTATTTGAGGGCA+TGG 0.529744 3.3:-72564009 MS.gene75493:CDS
ATCCTGGTTGTGTCCCAGAT+GGG 0.532879 3.3:+72563400 None:intergenic
ATCCCATCTGGGACACAACC+AGG 0.538117 3.3:-72563402 MS.gene75493:CDS
TGATGCAAACTTGGCTATTG+TGG 0.538121 3.3:+72567839 None:intergenic
CACTCAAACAAGGACTCCGT+TGG 0.539049 3.3:-72563775 MS.gene75493:CDS
ACACTTGTTATGGCAAAGAA+AGG 0.539668 3.3:-72563375 MS.gene75493:CDS
TCGCTATTTGAGGGCATGGA+TGG 0.540022 3.3:-72564005 MS.gene75493:CDS
ATGACAAATTTGGGGAGGCA+GGG 0.541510 3.3:-72564184 MS.gene75493:CDS
GTAGCTGATGTACTACCAAA+AGG 0.543027 3.3:+72567900 None:intergenic
ATCAAACTTTGCATCGTCGA+AGG 0.545133 3.3:-72566310 MS.gene75493:CDS
ACTCAAACAAGGACTCCGTT+GGG 0.546387 3.3:-72563774 MS.gene75493:CDS
CGCAGCAGACAATCTTGGAA+TGG 0.550184 3.3:-72563981 MS.gene75493:CDS
TTTACAAGAATATAAAATGT+TGG 0.551313 3.3:+72563497 None:intergenic
CGATGAGAGAAAACTGATTG+AGG 0.553553 3.3:-72563271 MS.gene75493:CDS
GTCCGAAATGAAGGTAACTC+TGG 0.554384 3.3:-72563597 MS.gene75493:CDS
GCTGAATAAGAAGAATATGA+GGG 0.556781 3.3:-72563343 MS.gene75493:CDS
TCAAACTTTGCATCGTCGAA+GGG 0.557101 3.3:-72566309 MS.gene75493:CDS
AGGTTCACCGGGATTTGGTG+GGG 0.558467 3.3:-72564156 MS.gene75493:CDS
ACACATGTGGTGGTCAGGGA+CGG 0.560533 3.3:-72563803 MS.gene75493:CDS
CCCCAGAACATGTACTGCAA+GGG 0.565096 3.3:+72563694 None:intergenic
GGCAGGGCTTAAAGGTTCAC+CGG 0.569076 3.3:-72564168 MS.gene75493:CDS
ATATTCTTCTTATTCAGCAG+AGG 0.569920 3.3:+72563348 None:intergenic
GGGAATTCGTCCTCAGATTG+TGG 0.570156 3.3:-72567871 MS.gene75493:CDS
AGCAAAGGCAAGACTGCCGC+CGG 0.579260 3.3:-72563234 MS.gene75493:CDS
GCGACTCAAACAGATCAAAA+GGG 0.581128 3.3:+72564024 None:intergenic
TGTAACACATGTGGTGGTCA+GGG 0.583052 3.3:-72563807 MS.gene75493:CDS
TGAACCTATATTAAAACGCA+AGG 0.584026 3.3:+72566334 None:intergenic
TCTTGTCAGATGATGAGAAA+CGG 0.584943 3.3:-72564214 MS.gene75493:CDS
TCCCCAGAACATGTACTGCA+AGG 0.589752 3.3:+72563693 None:intergenic
AACAAAGCGGATAAGTCTCA+AGG 0.598548 3.3:-72563655 MS.gene75493:CDS
GCAGGGCTTAAAGGTTCACC+GGG 0.602555 3.3:-72564167 MS.gene75493:CDS
GGTTCCGACTGTAGATGGAA+TGG 0.604592 3.3:-72563436 MS.gene75493:CDS
CACGAAATATCATCTCATAC+CGG 0.605585 3.3:+72563215 None:intergenic
GATGGTTCAGGAGCTAAACC+AGG 0.608802 3.3:-72563846 MS.gene75493:CDS
AGAACAACAAAGAGGTCACC+AGG 0.612651 3.3:+72563558 None:intergenic
TGGATTTGAAAATCCCATCT+GGG 0.615278 3.3:-72563413 MS.gene75493:CDS
CCCAGAACATGTACTGCAAG+GGG 0.617559 3.3:+72563695 None:intergenic
TCTCAAGGTTCCAGCCGGTG+TGG 0.618146 3.3:-72563640 MS.gene75493:CDS
ATAAGTCTCAAGGTTCCAGC+CGG 0.620771 3.3:-72563645 MS.gene75493:CDS
CTTATATTGATGCAATCTTG+GGG 0.623095 3.3:-72563470 MS.gene75493:CDS
GACGGGTTGTCACTCAAACA+AGG 0.625091 3.3:-72563785 MS.gene75493:CDS
TGCAAACTTGGCTATTGTGG+TGG 0.627230 3.3:+72567842 None:intergenic
GGTAACTCTGGAAAGAAAGG+TGG 0.630205 3.3:-72563585 MS.gene75493:CDS
GAACTCTCGGAGTTGAGCAA+AGG 0.632985 3.3:-72563249 MS.gene75493:CDS
GAGAAGTGTGGTACTTGCGA+TGG 0.635595 3.3:-72563864 MS.gene75493:CDS
TCCAGATGTAACACATGTGG+TGG 0.637762 3.3:-72563813 MS.gene75493:CDS
TCCACCATTCCATCTACAGT+CGG 0.638944 3.3:+72563432 None:intergenic
GGAAATCAGTAATGCGTACG+AGG 0.643998 3.3:-72564321 MS.gene75493:intron
GGACTACTACACCGTCCTTG+GGG 0.645334 3.3:-72566100 MS.gene75493:CDS
CCCTTGCAGTACATGTTCTG+GGG 0.646072 3.3:-72563694 MS.gene75493:CDS
GTGGATCTGGCCACAATCTG+AGG 0.648017 3.3:+72567861 None:intergenic
TAACTTCAAGAACAACAAAG+AGG 0.649565 3.3:+72563550 None:intergenic
GACTGCTGAAAGATACCCAA+CGG 0.649757 3.3:+72563759 None:intergenic
CTGAATAAGAAGAATATGAG+GGG 0.650416 3.3:-72563342 MS.gene75493:CDS
CAAACTTTGCATCGTCGAAG+GGG 0.657260 3.3:-72566308 MS.gene75493:CDS
CATATATGACAAATTTGGGG+AGG 0.659382 3.3:-72564189 MS.gene75493:CDS
TCCGACTGTAGATGGAATGG+TGG 0.660929 3.3:-72563433 MS.gene75493:CDS
GTCCATATATGACAAATTTG+GGG 0.662707 3.3:-72564192 MS.gene75493:CDS
TCATCCAGATGTAACACATG+TGG 0.669998 3.3:-72563816 MS.gene75493:CDS
ATTAGGCGACTAGAGAAGTG+TGG 0.694061 3.3:-72563876 MS.gene75493:CDS
ATGGTTCAGGAGCTAAACCA+GGG 0.708190 3.3:-72563845 MS.gene75493:CDS
GCCGGGTGAGGAAAACAAAG+CGG 0.718931 3.3:-72563668 MS.gene75493:CDS
GAAATATCATCTCATACCGG+CGG 0.725473 3.3:+72563218 None:intergenic
AGTACATCAGCTACTCAATG+GGG 0.730358 3.3:-72567891 MS.gene75493:CDS
ACGGCTACCAGAATCCACAC+CGG 0.739891 3.3:+72563626 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTTCATATTCATCAAA+TGG + chr3.3:72564113-72564132 None:intergenic 15.0%
!! TATTAAATGAGATAATCATT+CGG + chr3.3:72565806-72565825 None:intergenic 15.0%
!! TTAAATGTAAAAAATCCTAA+AGG - chr3.3:72564249-72564268 MS.gene75493:intron 15.0%
!! TTTACAAGAATATAAAATGT+TGG + chr3.3:72567642-72567661 None:intergenic 15.0%
!!! AATTTTGAAAGTTTCAAATT+TGG + chr3.3:72566057-72566076 None:intergenic 15.0%
!!! ATTTTCATTCTTCTAAAATA+CGG - chr3.3:72564312-72564331 MS.gene75493:intron 15.0%
!!! TCTGTTTTTTTTTTTAACTT+AGG - chr3.3:72564392-72564411 MS.gene75493:intron 15.0%
!!! TTTCATTTCACTTTTTTTTT+TGG - chr3.3:72566214-72566233 MS.gene75493:intron 15.0%
!! AATTATGCAACTAGAAATTA+TGG + chr3.3:72566691-72566710 None:intergenic 20.0%
!! AGTAAATGTGAATAATTAAG+CGG + chr3.3:72563835-72563854 None:intergenic 20.0%
!! ATGAATTTGAAGAATCAAAT+AGG - chr3.3:72564218-72564237 MS.gene75493:CDS 20.0%
!! TAAAGTGAATACACATATAT+AGG + chr3.3:72566760-72566779 None:intergenic 20.0%
!! TACTAATAAAATGTTTGTGA+AGG - chr3.3:72565271-72565290 MS.gene75493:intron 20.0%
!! TGTAAAATCTTTGTGATTAT+AGG - chr3.3:72567079-72567098 MS.gene75493:intron 20.0%
!! TTAAAATTCTCCATAATCTT+TGG + chr3.3:72567033-72567052 None:intergenic 20.0%
!!! ATTTTGTTTAATGCCAAAAA+AGG - chr3.3:72566008-72566027 MS.gene75493:intron 20.0%
!!! GGATTTTTTACATTTAACAA+TGG + chr3.3:72564246-72564265 None:intergenic 20.0%
!!! TAAATGTTTAGTTTGAACTT+CGG + chr3.3:72566194-72566213 None:intergenic 20.0%
!!! TCTTATACCAAACTTTTTTA+TGG + chr3.3:72563422-72563441 None:intergenic 20.0%
!!! TTAATTCTTGTTCTATGTTT+TGG + chr3.3:72565351-72565370 None:intergenic 20.0%
!!! TTGCATAATTTTTTTTCACA+TGG - chr3.3:72566701-72566720 MS.gene75493:intron 20.0%
!!! TTTTAGAAGAATGAAAATAG+AGG + chr3.3:72564310-72564329 None:intergenic 20.0%
!!! TTTTCTCAATCAATTCTTTA+GGG - chr3.3:72563998-72564017 MS.gene75493:CDS 20.0%
!!! TTTTTCTCAATCAATTCTTT+AGG - chr3.3:72563997-72564016 MS.gene75493:CDS 20.0%
! ACCTAAATACAGAAGAATTT+AGG + chr3.3:72565549-72565568 None:intergenic 25.0%
! GTAAATGTGAATAATTAAGC+GGG + chr3.3:72563834-72563853 None:intergenic 25.0%
! TAAATGTGAATAATTAAGCG+GGG + chr3.3:72563833-72563852 None:intergenic 25.0%
! TAGAAAAGGAAAAAAAGAGT+GGG + chr3.3:72566519-72566538 None:intergenic 25.0%
! TAGATATTCAGCCAATATAT+TGG + chr3.3:72564999-72565018 None:intergenic 25.0%
! TATCAGAAACATCAATTACT+CGG - chr3.3:72566276-72566295 MS.gene75493:intron 25.0%
! TATGAACTAACCATGAATTA+GGG + chr3.3:72566870-72566889 None:intergenic 25.0%
! TCAAATTCATTGATGAGAAT+TGG + chr3.3:72564208-72564227 None:intergenic 25.0%
! TCCTAAATTCTTCTGTATTT+AGG - chr3.3:72565545-72565564 MS.gene75493:intron 25.0%
! TCTCATTGAAAAGAAATATC+CGG - chr3.3:72563525-72563544 MS.gene75493:CDS 25.0%
! TCTCTTGTATATTACTTTGA+AGG - chr3.3:72563362-72563381 MS.gene75493:CDS 25.0%
! TCTTATATTGATGCAATCTT+GGG - chr3.3:72567665-72567684 MS.gene75493:intron 25.0%
! TGAAAGTTTCAAATTTGGTT+TGG + chr3.3:72566052-72566071 None:intergenic 25.0%
! TTATGAACTAACCATGAATT+AGG + chr3.3:72566871-72566890 None:intergenic 25.0%
!! ACTAAATCTGAAATTAAGAC+TGG - chr3.3:72565073-72565092 MS.gene75493:intron 25.0%
!! ATGTAACTATAATCCTTTTC+AGG - chr3.3:72566899-72566918 MS.gene75493:intron 25.0%
!! TAATGCAGTGATTTAAAATG+AGG + chr3.3:72564468-72564487 None:intergenic 25.0%
!! TGATTTTATTGAAGTTCCAA+AGG + chr3.3:72563720-72563739 None:intergenic 25.0%
!!! AGAGGCATTGAATATTAAAT+AGG + chr3.3:72564292-72564311 None:intergenic 25.0%
!!! ATTCTAGTTTTGGTTTATGT+TGG + chr3.3:72566130-72566149 None:intergenic 25.0%
!!! TTTTTTTTGGTAATCAATGC+AGG - chr3.3:72566227-72566246 MS.gene75493:intron 25.0%
AAAACCAGACAATTGACTAA+TGG + chr3.3:72563980-72563999 None:intergenic 30.0%
AAAACTGTTCCTAATGAGTA+AGG + chr3.3:72564667-72564686 None:intergenic 30.0%
AAATCATAACAGTCAGAGAA+GGG + chr3.3:72565113-72565132 None:intergenic 30.0%
AAATTCTCCATAATCTTTGG+AGG + chr3.3:72567030-72567049 None:intergenic 30.0%
AACAAAATAAACAGCCGTTT+AGG + chr3.3:72565996-72566015 None:intergenic 30.0%
ACAAAATAAACAGCCGTTTA+GGG + chr3.3:72565995-72566014 None:intergenic 30.0%
ACACAAGAATCAATTCTACT+TGG + chr3.3:72563806-72563825 None:intergenic 30.0%
ACTATGACCATCCAATATAT+TGG - chr3.3:72564985-72565004 MS.gene75493:intron 30.0%
AGAAAGCAGATAACTTCAAT+GGG + chr3.3:72566474-72566493 None:intergenic 30.0%
ATATTCTTCTTATTCAGCAG+AGG + chr3.3:72567791-72567810 None:intergenic 30.0%
ATCAGAAACATCAATTACTC+GGG - chr3.3:72566277-72566296 MS.gene75493:intron 30.0%
ATGAGATAATCATTCGGATT+TGG + chr3.3:72565800-72565819 None:intergenic 30.0%
ATTGTGATTAAATTGCGTTG+TGG - chr3.3:72564439-72564458 MS.gene75493:intron 30.0%
CTAGAAAAGGAAAAAAAGAG+TGG + chr3.3:72566520-72566539 None:intergenic 30.0%
CTGAATAAGAAGAATATGAG+GGG - chr3.3:72567794-72567813 MS.gene75493:intron 30.0%
CTTAATACCAATACTGAAGA+AGG - chr3.3:72565848-72565867 MS.gene75493:intron 30.0%
CTTATATTGATGCAATCTTG+GGG - chr3.3:72567666-72567685 MS.gene75493:intron 30.0%
GCAATAGTGAAATCTAGAAA+AGG + chr3.3:72566533-72566552 None:intergenic 30.0%
GCTATAGCCATAAAAAAGTT+TGG - chr3.3:72563412-72563431 MS.gene75493:CDS 30.0%
GCTGAATAAGAAGAATATGA+GGG - chr3.3:72567793-72567812 MS.gene75493:intron 30.0%
GGTCCATATATGACAAATTT+GGG - chr3.3:72566943-72566962 MS.gene75493:intron 30.0%
GTCCATATATGACAAATTTG+GGG - chr3.3:72566944-72566963 MS.gene75493:intron 30.0%
GTCTTATATTGATGCAATCT+TGG - chr3.3:72567664-72567683 MS.gene75493:intron 30.0%
TAACAATGCAATGATACCAT+GGG + chr3.3:72566359-72566378 None:intergenic 30.0%
TAACTTCAAGAACAACAAAG+AGG + chr3.3:72567589-72567608 None:intergenic 30.0%
TAGAAAGCAGATAACTTCAA+TGG + chr3.3:72566475-72566494 None:intergenic 30.0%
TATTCAGCCAATATATTGGA+TGG + chr3.3:72564995-72565014 None:intergenic 30.0%
TCAAGAAGAATACTTTCACA+AGG + chr3.3:72564952-72564971 None:intergenic 30.0%
TCACATCTGGATGATAATTT+CGG + chr3.3:72566423-72566442 None:intergenic 30.0%
TCCTAATCATTCGTAGTTAA+CGG + chr3.3:72565502-72565521 None:intergenic 30.0%
TCTAGATTTCACTATTGCTA+TGG - chr3.3:72566535-72566554 MS.gene75493:intron 30.0%
TGAACCTATATTAAAACGCA+AGG + chr3.3:72564805-72564824 None:intergenic 30.0%
TGCTGAATAAGAAGAATATG+AGG - chr3.3:72567792-72567811 MS.gene75493:intron 30.0%
TTAACAATGCAATGATACCA+TGG + chr3.3:72566360-72566379 None:intergenic 30.0%
TTAATGCCAAAAAAGGACAT+GGG - chr3.3:72566015-72566034 MS.gene75493:intron 30.0%
TTATTGAAGTTCCAAAGGTT+GGG + chr3.3:72563715-72563734 None:intergenic 30.0%
TTCAGATAAAATGTCTGTGA+AGG - chr3.3:72565871-72565890 MS.gene75493:intron 30.0%
TTGCTTTACAACATACAACA+AGG + chr3.3:72565718-72565737 None:intergenic 30.0%
TTGTGATTAAATTGCGTTGT+GGG - chr3.3:72564440-72564459 MS.gene75493:intron 30.0%
TTTAATGCCAAAAAAGGACA+TGG - chr3.3:72566014-72566033 MS.gene75493:intron 30.0%
TTTATTGAAGTTCCAAAGGT+TGG + chr3.3:72563716-72563735 None:intergenic 30.0%
! ACAAATTGGTAGCACTATTT+AGG - chr3.3:72564071-72564090 MS.gene75493:intron 30.0%
! ATCACAGCTTTGATAACAAA+TGG + chr3.3:72565439-72565458 None:intergenic 30.0%
! GATTTTGTTACTCCAATTGT+CGG - chr3.3:72563446-72563465 MS.gene75493:CDS 30.0%
!! AGATTTTAGAAGAGACGATT+TGG + chr3.3:72563889-72563908 None:intergenic 30.0%
!! GAAAGTATTCTTCTTGAAGT+TGG - chr3.3:72564955-72564974 MS.gene75493:intron 30.0%
!! GATTCCTTGCGTTTTAATAT+AGG - chr3.3:72564798-72564817 MS.gene75493:intron 30.0%
!! TCATTCTTCTAAAATACGGA+GGG - chr3.3:72564316-72564335 MS.gene75493:intron 30.0%
!! TTCATTCTTCTAAAATACGG+AGG - chr3.3:72564315-72564334 MS.gene75493:intron 30.0%
!!! AACTTTTTTATGGCTATAGC+CGG + chr3.3:72563412-72563431 None:intergenic 30.0%
AAAACTAGAATCCTTGTACG+TGG - chr3.3:72566139-72566158 MS.gene75493:intron 35.0%
AAAACTGATTGAGGAACTCT+CGG - chr3.3:72567874-72567893 MS.gene75493:CDS 35.0%
AACAATGCAATGATACCATG+GGG + chr3.3:72566358-72566377 None:intergenic 35.0%
AACGCATCAACTAATGATGA+TGG + chr3.3:72565140-72565159 None:intergenic 35.0%
AACTACGAATGATTAGGATC+AGG - chr3.3:72565504-72565523 MS.gene75493:intron 35.0%
AATACTCACTTGTTCACATC+TGG + chr3.3:72566436-72566455 None:intergenic 35.0%
AATCTTGGGGACTACAATTA+AGG - chr3.3:72567679-72567698 MS.gene75493:intron 35.0%
ACTACGAATGATTAGGATCA+GGG - chr3.3:72565505-72565524 MS.gene75493:intron 35.0%
ACTAGAAATTATGGCATGAC+AGG + chr3.3:72566682-72566701 None:intergenic 35.0%
AGCAAAAAAGGTTGAACTTG+GGG + chr3.3:72564775-72564794 None:intergenic 35.0%
AGCACTGCAAGAAAAATGAT+TGG + chr3.3:72564727-72564746 None:intergenic 35.0%
ATCCATGAAATCGCACAAAT+TGG - chr3.3:72564057-72564076 MS.gene75493:intron 35.0%
ATCTGAACCTTCTTCAGTAT+TGG + chr3.3:72565858-72565877 None:intergenic 35.0%
ATGCAAAGATTTGTAACTGC+AGG - chr3.3:72565770-72565789 MS.gene75493:intron 35.0%
CAAAATAAACAGCCGTTTAG+GGG + chr3.3:72565994-72566013 None:intergenic 35.0%
CAAATCATAACAGTCAGAGA+AGG + chr3.3:72565114-72565133 None:intergenic 35.0%
CAACTCACTATTCAGATGTT+AGG - chr3.3:72564566-72564585 MS.gene75493:intron 35.0%
CAAGTTACCTCCAAAGATTA+TGG - chr3.3:72567020-72567039 MS.gene75493:intron 35.0%
CACATCTGGATGATAATTTC+GGG + chr3.3:72566422-72566441 None:intergenic 35.0%
CACTATTGCTATGGACAAAA+TGG - chr3.3:72566544-72566563 MS.gene75493:intron 35.0%
CATATATGACAAATTTGGGG+AGG - chr3.3:72566947-72566966 MS.gene75493:intron 35.0%
CGGTCCATATATGACAAATT+TGG - chr3.3:72566942-72566961 MS.gene75493:intron 35.0%
CTCCCCAAATTTGTCATATA+TGG + chr3.3:72566949-72566968 None:intergenic 35.0%
CTGAAAAATTCCACTTCTCT+TGG + chr3.3:72563774-72563793 None:intergenic 35.0%
CTGTAAATGTTTCAGCTTAC+CGG - chr3.3:72566389-72566408 MS.gene75493:CDS 35.0%
GAGCAAAAAAGGTTGAACTT+GGG + chr3.3:72564776-72564795 None:intergenic 35.0%
GATGCTATGTGTGATTTACT+TGG - chr3.3:72566320-72566339 MS.gene75493:CDS 35.0%
GATTCCATTAGTCAATTGTC+TGG - chr3.3:72563973-72563992 MS.gene75493:CDS 35.0%
TAAAATCTGTATCAATCGCC+TGG - chr3.3:72563901-72563920 MS.gene75493:CDS 35.0%
TAATCAATGCAGGAAAGGTT+TGG - chr3.3:72566237-72566256 MS.gene75493:intron 35.0%
TAATCGTCTTGATTGCTCTT+TGG - chr3.3:72566076-72566095 MS.gene75493:CDS 35.0%
TAATGCCAAAAAAGGACATG+GGG - chr3.3:72566016-72566035 MS.gene75493:intron 35.0%
TACAAGCAGGATAAGCTTTA+TGG - chr3.3:72564746-72564765 MS.gene75493:intron 35.0%
TACCAATTTGTGCGATTTCA+TGG + chr3.3:72564062-72564081 None:intergenic 35.0%
TACCGGAGTTGAGAAAAAAT+GGG - chr3.3:72563587-72563606 MS.gene75493:CDS 35.0%
TAGCAACAAGCATTATCAAG+TGG + chr3.3:72565948-72565967 None:intergenic 35.0%
TAGTACATCAGCTACTCAAT+GGG - chr3.3:72563244-72563263 MS.gene75493:CDS 35.0%
TCCGTTAACTACGAATGATT+AGG - chr3.3:72565498-72565517 MS.gene75493:intron 35.0%
TCTTGTCAGATGATGAGAAA+CGG - chr3.3:72566922-72566941 MS.gene75493:intron 35.0%
TGAAAAGAAATATCCGGCAA+GGG - chr3.3:72563531-72563550 MS.gene75493:CDS 35.0%
TGCAAAGATTTGTAACTGCA+GGG - chr3.3:72565771-72565790 MS.gene75493:intron 35.0%
TGGAAAAGGAGATAGAGATT+AGG - chr3.3:72567243-72567262 MS.gene75493:intron 35.0%
TGGATTTGAAAATCCCATCT+GGG - chr3.3:72567723-72567742 MS.gene75493:intron 35.0%
TGGTGCAGAAGAGAAATTTA+AGG - chr3.3:72566794-72566813 MS.gene75493:intron 35.0%
TGTTGTTCTTGAAGTTATCC+CGG - chr3.3:72567592-72567611 MS.gene75493:intron 35.0%
TTAAATTTCTCTTCTGCACC+AGG + chr3.3:72566795-72566814 None:intergenic 35.0%
TTCCAGAGTTACCTTCATTT+CGG + chr3.3:72567544-72567563 None:intergenic 35.0%
TTGAAAAGAAATATCCGGCA+AGG - chr3.3:72563530-72563549 MS.gene75493:CDS 35.0%
! CATAATCTTTGGAGGTAACT+TGG + chr3.3:72567022-72567041 None:intergenic 35.0%
! TGTAATCTTTTGCCTAGATG+CGG - chr3.3:72565744-72565763 MS.gene75493:intron 35.0%
! TTGGTATAATCTAAGACACC+CGG + chr3.3:72566571-72566590 None:intergenic 35.0%
! TTGTAATTTTGCCCAACCTT+TGG - chr3.3:72563701-72563720 MS.gene75493:CDS 35.0%
! TTTGGTAATCAATGCAGGAA+AGG - chr3.3:72566232-72566251 MS.gene75493:intron 35.0%
!! ACACTTGTTATGGCAAAGAA+AGG - chr3.3:72567761-72567780 MS.gene75493:intron 35.0%
!! TTAGAAGAGACGATTTGGTT+TGG + chr3.3:72563884-72563903 None:intergenic 35.0%
!!! AAGTTCAACCTTTTTTGCTC+GGG - chr3.3:72564776-72564795 MS.gene75493:intron 35.0%
!!! ACGTACAAGGATTCTAGTTT+TGG + chr3.3:72566140-72566159 None:intergenic 35.0%
!!! ACTTTTTTATGGCTATAGCC+GGG + chr3.3:72563411-72563430 None:intergenic 35.0%
!!! CAAGTTCAACCTTTTTTGCT+CGG - chr3.3:72564775-72564794 MS.gene75493:intron 35.0%
!!! TAGAATTTTTTGACACCCCA+AGG + chr3.3:72565054-72565073 None:intergenic 35.0%
AAATGACATGCTGCAAGCAT+TGG + chr3.3:72566590-72566609 None:intergenic 40.0%
AACAAAGCGGATAAGTCTCA+AGG - chr3.3:72567481-72567500 MS.gene75493:intron 40.0%
AATGCCAAAAAAGGACATGG+GGG - chr3.3:72566017-72566036 MS.gene75493:intron 40.0%
ACAATGCAATGATACCATGG+GGG + chr3.3:72566357-72566376 None:intergenic 40.0%
ACACAACTGACCCTAATTCA+TGG - chr3.3:72566857-72566876 MS.gene75493:intron 40.0%
ACCGGAGTTGAGAAAAAATG+GGG - chr3.3:72563588-72563607 MS.gene75493:CDS 40.0%
AGCGACTCAAACAGATCAAA+AGG + chr3.3:72567116-72567135 None:intergenic 40.0%
AGTACATCAGCTACTCAATG+GGG - chr3.3:72563245-72563264 MS.gene75493:CDS 40.0%
ATCAAACTTTGCATCGTCGA+AGG - chr3.3:72564826-72564845 MS.gene75493:intron 40.0%
ATTAAGGTTCCGACTGTAGA+TGG - chr3.3:72567695-72567714 MS.gene75493:intron 40.0%
CCAACAGATCCTTACTCATT+AGG - chr3.3:72564655-72564674 MS.gene75493:intron 40.0%
CCTAATGAGTAAGGATCTGT+TGG + chr3.3:72564658-72564677 None:intergenic 40.0%
CGAGCAAAAAAGGTTGAACT+TGG + chr3.3:72564777-72564796 None:intergenic 40.0%
CGATGAGAGAAAACTGATTG+AGG - chr3.3:72567865-72567884 MS.gene75493:CDS 40.0%
CTACCGGAGTTGAGAAAAAA+TGG - chr3.3:72563586-72563605 MS.gene75493:CDS 40.0%
CTCTTTGGTATTGTATTGCG+AGG - chr3.3:72566091-72566110 MS.gene75493:CDS 40.0%
CTGTTTGAGTCGCTATTTGA+GGG - chr3.3:72567122-72567141 MS.gene75493:intron 40.0%
CTTCATCTAACAGGCAATTC+AGG + chr3.3:72566636-72566655 None:intergenic 40.0%
CTTCATTTCGGACCCTTAAA+CGG + chr3.3:72567532-72567551 None:intergenic 40.0%
GATAACTTCAATGGGAAGTG+AGG + chr3.3:72566466-72566485 None:intergenic 40.0%
GCGACTCAAACAGATCAAAA+GGG + chr3.3:72567115-72567134 None:intergenic 40.0%
GCTAAACGACTTCATCTAAC+AGG + chr3.3:72566645-72566664 None:intergenic 40.0%
GTAGCTGATGTACTACCAAA+AGG + chr3.3:72563239-72563258 None:intergenic 40.0%
GTAGTACATCAGCTACTCAA+TGG - chr3.3:72563243-72563262 MS.gene75493:CDS 40.0%
GTGGATTTGAAAATCCCATC+TGG - chr3.3:72567722-72567741 MS.gene75493:intron 40.0%
GTTCAGGGTTTAACCAAAAC+AGG + chr3.3:72563564-72563583 None:intergenic 40.0%
GTTGAAGTGCATGTTGAGAA+CGG - chr3.3:72563648-72563667 MS.gene75493:CDS 40.0%
TCAAACTTTGCATCGTCGAA+GGG - chr3.3:72564827-72564846 MS.gene75493:intron 40.0%
TCATCCAGATGTAACACATG+TGG - chr3.3:72567320-72567339 MS.gene75493:intron 40.0%
TCATCTGACAAGACCTGAAA+AGG + chr3.3:72566915-72566934 None:intergenic 40.0%
TCTGTTTGAGTCGCTATTTG+AGG - chr3.3:72567121-72567140 MS.gene75493:intron 40.0%
TCTTGACAGAGTTAGCTGTT+AGG + chr3.3:72565322-72565341 None:intergenic 40.0%
TCTTGGAATGGAGCAATGAA+TGG - chr3.3:72567167-72567186 MS.gene75493:intron 40.0%
TGATGCAAACTTGGCTATTG+TGG + chr3.3:72563300-72563319 None:intergenic 40.0%
TTATCTGTCATATTGTGCCC+CGG - chr3.3:72563390-72563409 MS.gene75493:CDS 40.0%
TTGCTATGGACAAAATGGTC+CGG - chr3.3:72566549-72566568 MS.gene75493:intron 40.0%
! ACCAGGATCAACACTTGTTA+TGG - chr3.3:72567751-72567770 MS.gene75493:intron 40.0%
! GAAGGTAACTCTGGAAAGAA+AGG - chr3.3:72567548-72567567 MS.gene75493:intron 40.0%
! GTAATCTTTTGCCTAGATGC+GGG - chr3.3:72565745-72565764 MS.gene75493:intron 40.0%
! TTGAGAGGAAGTTTTCCAAG+AGG + chr3.3:72566166-72566185 None:intergenic 40.0%
!! CATTCGTAGTTAACGGACTA+AGG + chr3.3:72565495-72565514 None:intergenic 40.0%
!! GCATCAACTAATGATGATGG+AGG + chr3.3:72565137-72565156 None:intergenic 40.0%
!! GTGTCTTGATGATGCAAACT+TGG + chr3.3:72563309-72563328 None:intergenic 40.0%
!! TTAACGGACTAAGGCTAATG+TGG + chr3.3:72565486-72565505 None:intergenic 40.0%
!!! ACCCCATTTTTTCTCAACTC+CGG + chr3.3:72563592-72563611 None:intergenic 40.0%
!!! ATTTTTTGACACCCCAAGGA+CGG + chr3.3:72565050-72565069 None:intergenic 40.0%
!!! CATTTTTTCTCAACTCCGGT+AGG + chr3.3:72563588-72563607 None:intergenic 40.0%
!!! CTTTTTTATGGCTATAGCCG+GGG + chr3.3:72563410-72563429 None:intergenic 40.0%
!!! TCATCGCTGCTCAGTTTTTT+AGG + chr3.3:72567851-72567870 None:intergenic 40.0%
AAACTCACTGCCAAGAGAAG+TGG - chr3.3:72563761-72563780 MS.gene75493:CDS 45.0%
ACATCGTGTCCTAGATGCAA+AGG + chr3.3:72563939-72563958 None:intergenic 45.0%
ACCACCACATGTGTTACATC+TGG + chr3.3:72567327-72567346 None:intergenic 45.0%
ACTCAAACAAGGACTCCGTT+GGG - chr3.3:72567362-72567381 MS.gene75493:intron 45.0%
ACTTTATGCTGCAGAGATCC+TGG - chr3.3:72566774-72566793 MS.gene75493:intron 45.0%
AGAACAACAAAGAGGTCACC+AGG + chr3.3:72567581-72567600 None:intergenic 45.0%
AGTGGGAACAGAGCAAAAGA+CGG + chr3.3:72566502-72566521 None:intergenic 45.0%
ATAAACAGCCGTTTAGGGGT+TGG + chr3.3:72565990-72566009 None:intergenic 45.0%
ATAAGTCTCAAGGTTCCAGC+CGG - chr3.3:72567491-72567510 MS.gene75493:intron 45.0%
ATGACAAATTTGGGGAGGCA+GGG - chr3.3:72566952-72566971 MS.gene75493:intron 45.0%
ATGCCAAAAAAGGACATGGG+GGG - chr3.3:72566018-72566037 MS.gene75493:intron 45.0%
ATGGTTCAGGAGCTAAACCA+GGG - chr3.3:72567291-72567310 MS.gene75493:intron 45.0%
ATGTAACACATGTGGTGGTC+AGG - chr3.3:72567328-72567347 MS.gene75493:intron 45.0%
ATTAGGCGACTAGAGAAGTG+TGG - chr3.3:72567260-72567279 MS.gene75493:intron 45.0%
CAAACTTTGCATCGTCGAAG+GGG - chr3.3:72564828-72564847 MS.gene75493:intron 45.0%
CAAGGAATCCCGAGCAAAAA+AGG + chr3.3:72564787-72564806 None:intergenic 45.0%
CAAGTGGCAGACTTCATTGA+TGG + chr3.3:72565932-72565951 None:intergenic 45.0%
CAATGAGTTTGGCAGAGTCA+CGG - chr3.3:72563671-72563690 MS.gene75493:CDS 45.0%
CAGCTACTATAGCCGACAAT+TGG + chr3.3:72563461-72563480 None:intergenic 45.0%
CATCTGGATGATTTAGTCCC+TGG + chr3.3:72567311-72567330 None:intergenic 45.0%
CGTTTAAGGGTCCGAAATGA+AGG - chr3.3:72567530-72567549 MS.gene75493:intron 45.0%
CTTAAAGGTTCACCGGGATT+TGG - chr3.3:72566975-72566994 MS.gene75493:intron 45.0%
GACTGCTGAAAGATACCCAA+CGG + chr3.3:72567380-72567399 None:intergenic 45.0%
GGAAATCAGTAATGCGTACG+AGG - chr3.3:72566815-72566834 MS.gene75493:intron 45.0%
GGATTCTGGTAGCCGTTTAA+GGG - chr3.3:72567517-72567536 MS.gene75493:intron 45.0%
GGCTATAGTAGCTGTACTTC+TGG - chr3.3:72563467-72563486 MS.gene75493:CDS 45.0%
GGTGTCTTCTCGTTTAAGCA+CGG + chr3.3:72567621-72567640 None:intergenic 45.0%
GTCCGAAATGAAGGTAACTC+TGG - chr3.3:72567539-72567558 MS.gene75493:intron 45.0%
GTGTCTTCTCGTTTAAGCAC+GGG + chr3.3:72567620-72567639 None:intergenic 45.0%
GTGTTGAGTAGTGCTCCTTT+AGG + chr3.3:72564267-72564286 None:intergenic 45.0%
GTTAAACCCTGAACTCCTAC+CGG - chr3.3:72563570-72563589 MS.gene75493:CDS 45.0%
GTTGAGAACGGCAATGAGTT+TGG - chr3.3:72563660-72563679 MS.gene75493:CDS 45.0%
TAAACAGCCGTTTAGGGGTT+GGG + chr3.3:72565989-72566008 None:intergenic 45.0%
TATGACAAATTTGGGGAGGC+AGG - chr3.3:72566951-72566970 MS.gene75493:intron 45.0%
TCCACCATTCCATCTACAGT+CGG + chr3.3:72567707-72567726 None:intergenic 45.0%
TCCAGATGTAACACATGTGG+TGG - chr3.3:72567323-72567342 MS.gene75493:intron 45.0%
TCTAATATGTACCCGCATGC+AGG - chr3.3:72565015-72565034 MS.gene75493:intron 45.0%
TCTTGCTCACCTTTGCATCT+AGG - chr3.3:72563927-72563946 MS.gene75493:CDS 45.0%
TGCAAACTTGGCTATTGTGG+TGG + chr3.3:72563297-72563316 None:intergenic 45.0%
TGCGTACGAGGTAAAACTAG+AGG - chr3.3:72566827-72566846 MS.gene75493:intron 45.0%
TGCTATGGACAAAATGGTCC+GGG - chr3.3:72566550-72566569 MS.gene75493:intron 45.0%
TGGATTCTGGTAGCCGTTTA+AGG - chr3.3:72567516-72567535 MS.gene75493:intron 45.0%
TGTAACACATGTGGTGGTCA+GGG - chr3.3:72567329-72567348 MS.gene75493:intron 45.0%
TTTCTTGCAGTGCTACAAGC+AGG - chr3.3:72564733-72564752 MS.gene75493:CDS 45.0%
! CAAGGGCTTATTGCCTGTTT+TGG - chr3.3:72563548-72563567 MS.gene75493:CDS 45.0%
! GGTAACTCTGGAAAGAAAGG+TGG - chr3.3:72567551-72567570 MS.gene75493:intron 45.0%
! TGGTTATGCATTTTCCCCCA+TGG - chr3.3:72566340-72566359 MS.gene75493:CDS 45.0%
!! AGCTGTTTTCGGAGTGGAAA+AGG - chr3.3:72567229-72567248 MS.gene75493:intron 45.0%
!! ATGACTTGCTCGTCTTGCAA+TGG - chr3.3:72567401-72567420 MS.gene75493:intron 45.0%
!! GATAATTTCGGGCTAGCTTC+CGG + chr3.3:72566411-72566430 None:intergenic 45.0%
!! GCCATAACAAGTGTTGATCC+TGG + chr3.3:72567755-72567774 None:intergenic 45.0%
!! TGACTTGCTCGTCTTGCAAT+GGG - chr3.3:72567402-72567421 MS.gene75493:intron 45.0%
!! TTGTAAAAAAAAATATAAAA+AGG + chr3.3:72564924-72564943 None:intergenic 5.0%
!!! TTTTATATTTTTTTTTACAA+GGG - chr3.3:72564924-72564943 MS.gene75493:intron 5.0%
!!! TTTTTATATTTTTTTTTACA+AGG - chr3.3:72564923-72564942 MS.gene75493:intron 5.0%
AAACAGCCGTTTAGGGGTTG+GGG + chr3.3:72565988-72566007 None:intergenic 50.0%
AAAGGTTCACCGGGATTTGG+TGG - chr3.3:72566978-72566997 MS.gene75493:intron 50.0%
AACAGGCAATAAGCCCTTGC+CGG + chr3.3:72563547-72563566 None:intergenic 50.0%
ACCCCTTGCAGTACATGTTC+TGG - chr3.3:72567440-72567459 MS.gene75493:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr3.3:72565581-72565600 MS.gene75493:intron 50.0%
AGGACTACTACACCGTCCTT+GGG - chr3.3:72565035-72565054 MS.gene75493:intron 50.0%
ATCCTGGTTGTGTCCCAGAT+GGG + chr3.3:72567739-72567758 None:intergenic 50.0%
ATCCTTGTACGTGGTCCTCT+TGG - chr3.3:72566148-72566167 MS.gene75493:intron 50.0%
ATGGTCGCAGCAGACAATCT+TGG - chr3.3:72567150-72567169 MS.gene75493:intron 50.0%
CACTCAAACAAGGACTCCGT+TGG - chr3.3:72567361-72567380 MS.gene75493:intron 50.0%
CCCAGAACATGTACTGCAAG+GGG + chr3.3:72567444-72567463 None:intergenic 50.0%
CCCCAGAACATGTACTGCAA+GGG + chr3.3:72567445-72567464 None:intergenic 50.0%
CCCCTTGCAGTACATGTTCT+GGG - chr3.3:72567441-72567460 MS.gene75493:intron 50.0%
CCCTTGCAGTACATGTTCTG+GGG - chr3.3:72567442-72567461 MS.gene75493:intron 50.0%
CGCAGCAGACAATCTTGGAA+TGG - chr3.3:72567155-72567174 MS.gene75493:intron 50.0%
GAACTCTCGGAGTTGAGCAA+AGG - chr3.3:72567887-72567906 MS.gene75493:CDS 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - chr3.3:72565580-72565599 MS.gene75493:intron 50.0%
GATGGTTCAGGAGCTAAACC+AGG - chr3.3:72567290-72567309 MS.gene75493:intron 50.0%
GGAAAGAAAGGTGGTTCTCC+TGG - chr3.3:72567560-72567579 MS.gene75493:intron 50.0%
GGAGGGTCTTACAAAGTCAC+TGG - chr3.3:72564333-72564352 MS.gene75493:CDS 50.0%
GGGAATTCGTCCTCAGATTG+TGG - chr3.3:72563265-72563284 MS.gene75493:CDS 50.0%
GGTTCCGACTGTAGATGGAA+TGG - chr3.3:72567700-72567719 MS.gene75493:intron 50.0%
TCAACTCCGGTAGGAGTTCA+GGG + chr3.3:72563579-72563598 None:intergenic 50.0%
TCCCCAGAACATGTACTGCA+AGG + chr3.3:72567446-72567465 None:intergenic 50.0%
TCCGACTGTAGATGGAATGG+TGG - chr3.3:72567703-72567722 MS.gene75493:intron 50.0%
TCTCGTTTAAGCACGGGATC+CGG + chr3.3:72567614-72567633 None:intergenic 50.0%
TCTTTGCATCTCCCGCATCT+AGG + chr3.3:72565759-72565778 None:intergenic 50.0%
TGAACTTCGGCAGTCTTGAG+AGG + chr3.3:72566181-72566200 None:intergenic 50.0%
TGAGTCGCTATTTGAGGGCA+TGG - chr3.3:72567127-72567146 MS.gene75493:intron 50.0%
TGTGGTACTTGCGATGGTTC+AGG - chr3.3:72567278-72567297 MS.gene75493:intron 50.0%
TTCCAAGAGGACCACGTACA+AGG + chr3.3:72566153-72566172 None:intergenic 50.0%
! AAGGTTCACCGGGATTTGGT+GGG - chr3.3:72566979-72566998 MS.gene75493:intron 50.0%
! GAGAAGTGTGGTACTTGCGA+TGG - chr3.3:72567272-72567291 MS.gene75493:intron 50.0%
! TCGCTATTTGAGGGCATGGA+TGG - chr3.3:72567131-72567150 MS.gene75493:intron 50.0%
!! CTTGGCTATTGTGGTGGATC+TGG + chr3.3:72563291-72563310 None:intergenic 50.0%
!! GACGGGTTGTCACTCAAACA+AGG - chr3.3:72567351-72567370 MS.gene75493:intron 50.0%
!! TGCAGTACATGTTCTGGGGA+TGG - chr3.3:72567446-72567465 MS.gene75493:intron 50.0%
!!! TAGCCCCCCATGTCCTTTTT+TGG + chr3.3:72566024-72566043 None:intergenic 50.0%
!!! TCCGCTTTGTTTTCCTCACC+CGG + chr3.3:72567472-72567491 None:intergenic 50.0%
AACAGCCGTTTAGGGGTTGG+GGG + chr3.3:72565987-72566006 None:intergenic 55.0%
ACACATGTGGTGGTCAGGGA+CGG - chr3.3:72567333-72567352 MS.gene75493:intron 55.0%
ACGGCTACCAGAATCCACAC+CGG + chr3.3:72567513-72567532 None:intergenic 55.0%
AGAGAGAGAGAGAGAGAGGG+AGG - chr3.3:72565631-72565650 MS.gene75493:intron 55.0%
CAAAGGTGAGCAAGAGAGCC+AGG + chr3.3:72563922-72563941 None:intergenic 55.0%
CAGGACTACTACACCGTCCT+TGG - chr3.3:72565034-72565053 MS.gene75493:intron 55.0%
CGGTGTAGTAGTCCTGCATG+CGG + chr3.3:72565030-72565049 None:intergenic 55.0%
CTCAACTCCGGTAGGAGTTC+AGG + chr3.3:72563580-72563599 None:intergenic 55.0%
CTCGTTTAAGCACGGGATCC+GGG + chr3.3:72567613-72567632 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGGGA+GGG - chr3.3:72565632-72565651 MS.gene75493:intron 55.0%
GATCCTGGTTGTGTCCCAGA+TGG + chr3.3:72567740-72567759 None:intergenic 55.0%
GCAGGGCTTAAAGGTTCACC+GGG - chr3.3:72566969-72566988 MS.gene75493:intron 55.0%
GCCGGGTGAGGAAAACAAAG+CGG - chr3.3:72567468-72567487 MS.gene75493:intron 55.0%
GGACTACTACACCGTCCTTG+GGG - chr3.3:72565036-72565055 MS.gene75493:intron 55.0%
GGCAGGGCTTAAAGGTTCAC+CGG - chr3.3:72566968-72566987 MS.gene75493:intron 55.0%
GGTGTAGTAGTCCTGCATGC+GGG + chr3.3:72565029-72565048 None:intergenic 55.0%
GTGGATCTGGCCACAATCTG+AGG + chr3.3:72563278-72563297 None:intergenic 55.0%
TGCATCGTCGAAGGGGATCA+AGG - chr3.3:72564835-72564854 MS.gene75493:intron 55.0%
TGCTCGTCTTGCAATGGGAC+TGG - chr3.3:72567407-72567426 MS.gene75493:intron 55.0%
TTTGGGGAGGCAGGGCTTAA+AGG - chr3.3:72566960-72566979 MS.gene75493:intron 55.0%
! ATCCCATCTGGGACACAACC+AGG - chr3.3:72567734-72567753 MS.gene75493:intron 55.0%
!! AGGTTCACCGGGATTTGGTG+GGG - chr3.3:72566980-72566999 MS.gene75493:intron 55.0%
!! GTACATGTTCTGGGGATGGC+CGG - chr3.3:72567450-72567469 MS.gene75493:intron 55.0%
!! TACATGTTCTGGGGATGGCC+GGG - chr3.3:72567451-72567470 MS.gene75493:intron 55.0%
ACCCTCCCCCAACCCCTAAA+CGG - chr3.3:72565979-72565998 MS.gene75493:intron 60.0%
AGAGAGAGAGAGGGAGGGAG+AGG - chr3.3:72565637-72565656 MS.gene75493:intron 60.0%
AGCAAAGGCAAGACTGCCGC+CGG - chr3.3:72567902-72567921 MS.gene75493:CDS 60.0%
CACATGTGGTGGTCAGGGAC+GGG - chr3.3:72567334-72567353 MS.gene75493:intron 60.0%
CTACCAGAATCCACACCGGC+TGG + chr3.3:72567509-72567528 None:intergenic 60.0%
GAGAGAGAGAGGGAGGGAGA+GGG - chr3.3:72565638-72565657 MS.gene75493:intron 60.0%
GTTCCAGCCGGTGTGGATTC+TGG - chr3.3:72567503-72567522 MS.gene75493:intron 60.0%
TCTCAAGGTTCCAGCCGGTG+TGG - chr3.3:72567496-72567515 MS.gene75493:intron 60.0%
!! GGTTCACCGGGATTTGGTGG+GGG - chr3.3:72566981-72567000 MS.gene75493:intron 60.0%
AGAGAGGGAGGGAGAGGGAG+AGG - chr3.3:72565643-72565662 MS.gene75493:intron 65.0%
AGAGGGAGAGGGAGAGGGAG+AGG - chr3.3:72565655-72565674 MS.gene75493:intron 65.0%
AGCCGTTTAGGGGTTGGGGG+AGG + chr3.3:72565984-72566003 None:intergenic 65.0%
CCCATGCCCCCACCAAATCC+CGG + chr3.3:72566990-72567009 None:intergenic 65.0%
GAGAGGGAGGGAGAGGGAGA+GGG - chr3.3:72565644-72565663 MS.gene75493:intron 65.0%
GAGGGAGAGGGAGAGGGAGA+GGG - chr3.3:72565650-72565669 MS.gene75493:intron 65.0%
GCCGTTTAGGGGTTGGGGGA+GGG + chr3.3:72565983-72566002 None:intergenic 65.0%
!! ACCGGGATTTGGTGGGGGCA+TGG - chr3.3:72566986-72567005 MS.gene75493:intron 65.0%
!! CCGGGATTTGGTGGGGGCAT+GGG - chr3.3:72566987-72567006 MS.gene75493:intron 65.0%
!! CGGGATTTGGTGGGGGCATG+GGG - chr3.3:72566988-72567007 MS.gene75493:intron 65.0%
!! GGGATTTGGTGGGGGCATGG+GGG - chr3.3:72566989-72567008 MS.gene75493:intron 65.0%
GGAGGGAGAGGGAGAGGGAG+AGG - chr3.3:72565649-72565668 MS.gene75493:intron 70.0%
!! GTTCTGGGGATGGCCGGGTG+AGG - chr3.3:72567456-72567475 MS.gene75493:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 72563224 72567934 72563224 ID=MS.gene75493
chr3.3 mRNA 72563224 72567934 72563224 ID=MS.gene75493.t1;Parent=MS.gene75493
chr3.3 exon 72567828 72567934 72567828 ID=MS.gene75493.t1.exon1;Parent=MS.gene75493.t1
chr3.3 CDS 72567828 72567934 72567828 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
chr3.3 exon 72566280 72566415 72566280 ID=MS.gene75493.t1.exon2;Parent=MS.gene75493.t1
chr3.3 CDS 72566280 72566415 72566280 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
chr3.3 exon 72566064 72566121 72566064 ID=MS.gene75493.t1.exon3;Parent=MS.gene75493.t1
chr3.3 CDS 72566064 72566121 72566064 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
chr3.3 exon 72564712 72564754 72564712 ID=MS.gene75493.t1.exon4;Parent=MS.gene75493.t1
chr3.3 CDS 72564712 72564754 72564712 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
chr3.3 exon 72564322 72564370 72564322 ID=MS.gene75493.t1.exon5;Parent=MS.gene75493.t1
chr3.3 CDS 72564322 72564370 72564322 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
chr3.3 exon 72564148 72564237 72564148 ID=MS.gene75493.t1.exon6;Parent=MS.gene75493.t1
chr3.3 CDS 72564148 72564237 72564148 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
chr3.3 exon 72563224 72564057 72563224 ID=MS.gene75493.t1.exon7;Parent=MS.gene75493.t1
chr3.3 CDS 72563224 72564057 72563224 ID=cds.MS.gene75493.t1;Parent=MS.gene75493.t1
Gene Sequence

>MS.gene75493

ATGGCAGTTACACCTTTTGGTAGTACATCAGCTACTCAATGGGGAATTCGTCCTCAGATTGTGGCCAGATCCACCACAATAGCCAAGTTTGCATCATCAAGACACAAGTCAGTCTTATGTTTTATTCTTAATTTTCATTCTCTTGTATATTACTTTGAAGGTTGATTTATCTGTCATATTGTGCCCCGGCTATAGCCATAAAAAAGTTTGGTATAAGAATGCGATTTTGTTACTCCAATTGTCGGCTATAGTAGCTGTACTTCTGGATATAGATTCAGATTATCAGAAACTAAGATGTGTTTCTCATTGAAAAGAAATATCCGGCAAGGGCTTATTGCCTGTTTTGGTTAAACCCTGAACTCCTACCGGAGTTGAGAAAAAATGGGGTTTAGTCATTTGAATTTTGTTAAGTTGATTGTAGTGAGTTGAAGTGCATGTTGAGAACGGCAATGAGTTTGGCAGAGTCACGGTGTGTCATTGTAATTTTGCCCAACCTTTGGAACTTCAATAAAATCACAGTGTTGTTGTGATTTCATCAAACTCACTGCCAAGAGAAGTGGAATTTTTCAGTTTTTTGCACCAAGTAGAATTGATTCTTGTGTCAGACCCCGCTTAATTATTCACATTTACTCTGCAAAAGTGACTATACTTTATTTTCCAAACCAAATCGTCTCTTCTAAAATCTGTATCAATCGCCTGGCTCTCTTGCTCACCTTTGCATCTAGGACACGATGTCTTCATTTTAAGATGATTCCATTAGTCAATTGTCTGGTTTTTTCTCAATCAATTCTTTAGGGTCTTATGATATCACTTTGAAACAAATCAATTATTTCATCCATGAAATCGCACAAATTGGTAGCACTATTTAGGAAGTCAACAATTTGTGCCATTTGATGAATATGAAATATAATCATGCAACTTTTATCACTGATATGAGTTGCACGATTCAACAATTTATGTTTTTATCTTGCTTTTATGTCGCCAATTCTCATCAATGAATTTGAAGAATCAAATAGGTGCCATTGTTAAATGTAAAAAATCCTAAAGGAGCACTACTCAACACAACCTATTTAATATTCAATGCCTCTATTTTCATTCTTCTAAAATACGGAGGGTCTTACAAAGTCACTGGATCAATTGCTTTCTCACAATTTTCGCATACTTTTTCTCTGTTTTTTTTTTTAACTTAGGACATAGAACATTTGTGTTTGTTACATTGTGATTAAATTGCGTTGTGGGTTCCTCATTTTAAATCACTGCATTAAACACTATACATCATTATATGATATATTTGAAGTTATTTTGCATTGAACTTCTGAATCTTACGATTTGATACGATTTACAACTCACTATTCAGATGTTAGGTTTGCGATTCACAATTTATAACTTTGACATCTATTTGTTCAAAAATCAATTTTGAAAAAATTAAAACCAACAGATCCTTACTCATTAGGAACAGTTTTGCAGCATAATTCATTGTGTCGTAGAGTGTAATTCAATCCAATCATTTTTCTTGCAGTGCTACAAGCAGGATAAGCTTTATGGCTGCCCCAAGTTCAACCTTTTTTGCTCGGGATTCCTTGCGTTTTAATATAGGTTCACATCAAACTTTGCATCGTCGAAGGGGATCAAGGTTGATAGTTAGAGCAGATGCAGTAAGTTTTTATTACTTATGCTTTTCTAAGAAACGATGATTTCCTTTTTATATTTTTTTTTACAAGGGTTCCTTGTGAAAGTATTCTTCTTGAAGTTGGTTATATAACTATGACCATCCAATATATTGGCTGAATATCTAATATGTACCCGCATGCAGGACTACTACACCGTCCTTGGGGTGTCAAAAAATTCTACTAAATCTGAAATTAAGACTGGTATGTTTCTGCAGTCCCTTCTCTGACTGTTATGATTTGCCTCCATCATCATTAGTTGATGCGTTCAAATTCAGTGCTTTTATTTACTTATTAGTTGTTGAATTCACGAATGATAATCTTCTTTTATATTATATATCTCTTGCTGTTTCTTTAACATTGACTAATTGAAATACTATTACTAATAAAATGTTTGTGAAGGATGCAAGAGAAGTACTGATAATGAACCTAACAGCTAACTCTGTCAAGAAGTCTGCCAAAACATAGAACAAGAATTAAAGTAACAATATCAAAACTAAATACATTGTTTTTATTTACTCATTAGTTGTTGAATTCTTGAATGACCATTTGTTATCAAAGCTGTGATCTCTGTATTAACAGAAATTAGTGACCACATTAGCCTTAGTCCGTTAACTACGAATGATTAGGATCAGGGTTCTCTACATTTGAGTTTCCTAAATTCTTCTGTATTTAGGTAAACATCTTTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGAGAGAGTGTTGCATATGTATGTTTCCTTGTTGTATGTTGTAAAGCAAAAGCATTGTAATCTTTTGCCTAGATGCGGGAGATGCAAAGATTTGTAACTGCAGGGAATCCAAATCCGAATGATTATCTCATTTAATATAACTCTTGCTACTTCTTTAATCTTAATACCAATACTGAAGAAGGTTCAGATAAAATGTCTGTGAAGGATGTAAGATGAGTAAATCAAATTTAACAGTTAAAACCATCAATGAAGTCTGCCACTTGATAATGCTTGTTGCTAATAATCATGAGACCCTCCCCCAACCCCTAAACGGCTGTTTATTTTGTTTAATGCCAAAAAAGGACATGGGGGGCTAGCTTTCCAAACCAAATTTGAAACTTTCAAAATTAATCGTCTTGATTGCTCTTTGGTATTGTATTGCGAGGCTTTCTGTATAGACCAACATAAACCAAAACTAGAATCCTTGTACGTGGTCCTCTTGGAAAACTTCCTCTCAAGACTGCCGAAGTTCAAACTAAACATTTATTTCATTTCACTTTTTTTTTTGGTAATCAATGCAGGAAAGGTTTGGAGAAGTTTAAAATTAGTATCAGAAACATCAATTACTCGGGTTAAGCTATTATTATAGCTAGATGCTATGTGTGATTTACTTGGTTATGCATTTTCCCCCATGGTATCATTGCATTGTTAACTCTTTCTACTGTAAATGTTTCAGCTTACCGGAAGCTAGCCCGAAATTATCATCCAGATGTGAACAAGTGAGTATTTTTTTTTCCTCACTTCCCATTGAAGTTATCTGCTTTCTAATATCCGTCTTTTGCTCTGTTCCCACTCTTTTTTTCCTTTTCTAGATTTCACTATTGCTATGGACAAAATGGTCCGGGTGTCTTAGATTATACCAATGCTTGCAGCATGTCATTTTTAAATCAATTTTTTTGTACATTCCTGAATTGCCTGTTAGATGAAGTCGTTTAGCTAAGTGCATTTTCACCTGTCATGCCATAATTTCTAGTTGCATAATTTTTTTTCACATGGTCATAATCATTTATTAACGTTGCTTATCGTTGACCTATATATGTGTATTCACTTTATGCTGCAGAGATCCTGGTGCAGAAGAGAAATTTAAGGAAATCAGTAATGCGTACGAGGTAAAACTAGAGGATAATAAACACAACTGACCCTAATTCATGGTTAGTTCATAACTGATCTTATGTAACTATAATCCTTTTCAGGTCTTGTCAGATGATGAGAAACGGTCCATATATGACAAATTTGGGGAGGCAGGGCTTAAAGGTTCACCGGGATTTGGTGGGGGCATGGGGGTAAGTTACCAAGTTACCTCCAAAGATTATGGAGAATTTTAATTTGTCATAACATTGTTTTTGATAAATGTAAAATCTTTGTGATTATAGGATTTCAGCAACCCTTTTGATCTGTTTGAGTCGCTATTTGAGGGCATGGATGGTCGCAGCAGACAATCTTGGAATGGAGCAATGAATGGCGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCTGTTTTCGGAGTGGAAAAGGAGATAGAGATTAGGCGACTAGAGAAGTGTGGTACTTGCGATGGTTCAGGAGCTAAACCAGGGACTAAATCATCCAGATGTAACACATGTGGTGGTCAGGGACGGGTTGTCACTCAAACAAGGACTCCGTTGGGTATCTTTCAGCAGTCTATGACTTGCTCGTCTTGCAATGGGACTGGAGAAACTCGAACCCCTTGCAGTACATGTTCTGGGGATGGCCGGGTGAGGAAAACAAAGCGGATAAGTCTCAAGGTTCCAGCCGGTGTGGATTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGTAACTCTGGAAAGAAAGGTGGTTCTCCTGGTGACCTCTTTGTTGTTCTTGAAGTTATCCCGGATCCCGTGCTTAAACGAGAAGACACCAACATTTTATATTCTTGTAAAGTGTCTTATATTGATGCAATCTTGGGGACTACAATTAAGGTTCCGACTGTAGATGGAATGGTGGATTTGAAAATCCCATCTGGGACACAACCAGGATCAACACTTGTTATGGCAAAGAAAGGTGTTCCTCTGCTGAATAAGAAGAATATGAGGGGTGATCAATTCGTTCGAGTGCAAGTTGAGATTCCTAAAAAACTGAGCAGCGATGAGAGAAAACTGATTGAGGAACTCTCGGAGTTGAGCAAAGGCAAGACTGCCGCCGGTATGAGATGA

Protein sequence

>MS.gene75493.t1

MAVTPFGSTSATQWGIRPQIVARSTTIAKFASSRHNATSRISFMAAPSSTFFARDSLRFNIGSHQTLHRRRGSRLIVRADADYYTVLGVSKNSTKSEIKTAYRKLARNYHPDVNKDPGAEEKFKEISNAYEVLSDDEKRSIYDKFGEAGLKGSPGFGGGMGDFSNPFDLFESLFEGMDGRSRQSWNGAMNGEDEYYSLVLNFKEAVFGVEKEIEIRRLEKCGTCDGSGAKPGTKSSRCNTCGGQGRVVTQTRTPLGIFQQSMTCSSCNGTGETRTPCSTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRNEGNSGKKGGSPGDLFVVLEVIPDPVLKREDTNILYSCKVSYIDAILGTTIKVPTVDGMVDLKIPSGTQPGSTLVMAKKGVPLLNKKNMRGDQFVRVQVEIPKKLSSDERKLIEELSELSKGKTAAGMR