AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045133

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045133.t1 MTR_3g087030 98.858 438 5 0 1 438 1 438 0.0 890
MS.gene045133.t1 MTR_2g104030 48.744 398 188 5 41 428 34 425 2.17e-129 383
MS.gene045133.t1 MTR_6g471050 44.512 328 173 3 109 428 8 334 6.77e-88 275
MS.gene045133.t1 MTR_3g027580 40.845 355 184 8 82 427 89 426 3.40e-71 231
MS.gene045133.t1 MTR_4g023470 38.736 364 208 6 61 422 71 421 2.66e-70 229
MS.gene045133.t1 MTR_5g065160 34.140 372 211 10 79 434 79 432 3.08e-63 211
MS.gene045133.t1 MTR_5g065160 34.140 372 211 10 79 434 80 433 3.12e-63 211
MS.gene045133.t1 MTR_5g065160 34.140 372 211 10 79 434 80 433 5.83e-63 211
MS.gene045133.t1 MTR_5g065160 34.140 372 211 10 79 434 73 426 6.04e-63 210
MS.gene045133.t1 MTR_8g006430 34.615 338 205 9 83 411 15 345 2.54e-52 181
MS.gene045133.t1 MTR_4g023490 34.584 373 201 11 75 425 9 360 1.52e-51 178
MS.gene045133.t1 MTR_2g087660 31.909 351 220 9 83 423 14 355 2.03e-38 144
MS.gene045133.t1 MTR_4g050420 33.524 349 215 9 83 423 14 353 1.73e-37 141
MS.gene045133.t1 MTR_7g109340 31.412 347 203 12 83 425 27 342 1.81e-34 131
MS.gene045133.t1 MTR_2g087660 33.103 290 180 7 83 366 14 295 6.50e-32 124
MS.gene045133.t1 MTR_3g108020 28.863 343 213 11 81 419 3 318 5.13e-30 119
MS.gene045133.t1 MTR_2g014470 61.039 77 24 2 81 153 3 77 4.99e-21 94.0
MS.gene045133.t1 MTR_2g014480 51.961 102 36 4 82 180 4 95 2.95e-20 91.7
MS.gene045133.t1 MTR_4g078850 53.763 93 32 3 81 164 3 93 5.39e-20 91.3
MS.gene045133.t1 MTR_7g069480 54.667 75 32 1 82 156 27 99 1.45e-18 88.6
MS.gene045133.t1 MTR_4g015840 54.054 74 32 1 81 152 3 76 2.81e-18 85.9
MS.gene045133.t1 MTR_2g090705 53.333 75 33 1 81 153 3 77 9.64e-18 84.3
MS.gene045133.t1 MTR_7g085600 57.143 63 27 0 82 144 54 116 2.86e-16 79.7
MS.gene045133.t1 MTR_1g110310 58.571 70 28 1 82 150 16 85 2.55e-15 77.8
MS.gene045133.t1 MTR_7g101070 55.385 65 27 1 82 144 358 422 5.03e-15 77.4
MS.gene045133.t1 MTR_2g436560 37.500 104 60 1 77 175 99 202 7.82e-15 75.9
MS.gene045133.t1 MTR_2g097690 33.516 182 70 7 38 198 11 162 2.64e-14 72.0
MS.gene045133.t1 MTR_3g437850 45.679 81 37 2 82 159 2 78 3.01e-14 70.9
MS.gene045133.t1 MTR_2g436580 49.296 71 35 1 74 144 103 172 3.72e-14 72.0
MS.gene045133.t1 MTR_2g097690 39.370 127 55 4 38 143 11 136 7.40e-14 72.0
MS.gene045133.t1 MTR_5g035770 57.576 66 27 1 82 146 25 90 1.01e-13 73.2
MS.gene045133.t1 MTR_3g437360 51.389 72 33 1 82 151 5 76 1.13e-13 72.4
MS.gene045133.t1 MTR_7g112360 47.945 73 29 3 83 150 17 85 1.51e-13 67.4
MS.gene045133.t1 MTR_7g112360 48.485 66 29 2 83 143 17 82 2.84e-13 67.8
MS.gene045133.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 3.37e-13 68.9
MS.gene045133.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 4.17e-13 68.2
MS.gene045133.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 4.70e-13 68.6
MS.gene045133.t1 MTR_7g069480 48.000 75 31 2 82 156 27 93 6.46e-13 70.9
MS.gene045133.t1 MTR_5g012530 41.250 80 43 1 82 157 12 91 6.80e-13 70.9
MS.gene045133.t1 MTR_8g022310 42.391 92 42 2 82 166 10 97 9.15e-13 68.2
MS.gene045133.t1 MTR_6g027030 42.045 88 38 2 82 163 2 82 9.66e-13 67.8
MS.gene045133.t1 MTR_8g037810 52.174 69 32 1 83 150 7 75 1.85e-12 68.6
MS.gene045133.t1 MTR_5g004570 45.833 72 38 1 80 150 4 75 2.11e-12 67.4
MS.gene045133.t1 MTR_6g027110 43.529 85 35 2 82 160 2 79 2.39e-12 64.7
MS.gene045133.t1 MTR_1g052110 53.030 66 26 2 84 146 40 103 2.69e-12 67.4
MS.gene045133.t1 MTR_6g026940 44.118 68 32 1 82 143 2 69 8.47e-12 63.9
MS.gene045133.t1 MTR_1g105540 48.387 62 32 0 82 143 35 96 1.66e-11 65.5
MS.gene045133.t1 MTR_6g059870 40.964 83 48 1 77 158 61 143 3.63e-11 65.9
MS.gene045133.t1 MTR_8g081620 38.889 72 41 1 76 144 54 125 4.35e-11 62.4
MS.gene045133.t1 MTR_1g060440 31.690 142 86 2 80 221 65 195 6.73e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045133.t1 AT2G22360 72.210 439 115 5 1 434 1 437 0.0 654
MS.gene045133.t1 AT4G39960 67.929 449 131 5 1 438 1 447 0.0 620
MS.gene045133.t1 AT4G39960 67.929 449 131 5 1 438 1 447 0.0 620
MS.gene045133.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.54e-125 373
MS.gene045133.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.96e-125 373
MS.gene045133.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.96e-125 373
MS.gene045133.t1 AT1G80030 51.743 373 162 7 70 428 62 430 1.96e-125 373
MS.gene045133.t1 AT3G17830 46.076 395 196 6 42 425 29 417 1.75e-106 325
MS.gene045133.t1 AT5G48030 39.948 383 208 8 60 432 75 445 3.69e-76 245
MS.gene045133.t1 AT1G28210 33.994 353 211 6 82 427 48 385 1.12e-57 195
MS.gene045133.t1 AT1G28210 33.994 353 211 6 82 427 48 385 1.13e-57 195
MS.gene045133.t1 AT1G28210 33.994 353 211 6 82 427 48 385 1.93e-57 195
MS.gene045133.t1 AT5G22060 32.676 355 212 10 83 423 15 356 9.13e-43 155
MS.gene045133.t1 AT3G44110 32.782 363 220 11 83 434 15 364 4.24e-40 149
MS.gene045133.t1 AT3G44110 32.024 331 203 10 83 402 15 334 4.79e-34 130
MS.gene045133.t1 AT3G62600 29.577 355 217 11 75 425 19 344 2.05e-30 120
MS.gene045133.t1 AT5G01390 25.706 354 230 9 81 425 3 332 1.53e-29 118
MS.gene045133.t1 AT3G08910 27.568 370 190 13 81 425 3 319 2.00e-26 109
MS.gene045133.t1 AT3G08970 56.250 80 33 1 81 160 26 103 1.60e-20 94.7
MS.gene045133.t1 AT3G08970 56.250 80 33 1 81 160 26 103 1.60e-20 94.7
MS.gene045133.t1 AT5G25530 48.039 102 44 3 82 174 4 105 5.33e-20 91.3
MS.gene045133.t1 AT4G28480 54.054 74 32 1 82 153 4 77 2.71e-18 85.5
MS.gene045133.t1 AT4G28480 26.897 145 102 3 282 425 147 288 2.89e-11 64.7
MS.gene045133.t1 AT2G20560 50.000 88 40 2 81 164 3 90 3.37e-18 85.9
MS.gene045133.t1 AT2G20560 25.185 135 99 2 292 425 202 335 6.49e-12 67.0
MS.gene045133.t1 AT4G28480 54.054 74 32 1 82 153 4 77 4.65e-18 85.5
MS.gene045133.t1 AT5G25530 44.545 110 44 4 82 174 4 113 2.02e-17 83.6
MS.gene045133.t1 AT1G10350 49.333 75 36 1 81 153 3 77 6.48e-17 82.0
MS.gene045133.t1 AT1G10350 31.538 130 84 4 292 419 213 339 7.69e-11 63.9
MS.gene045133.t1 AT5G01390 52.778 72 32 1 81 150 3 74 7.98e-17 80.1
MS.gene045133.t1 AT5G01390 53.521 71 31 1 82 150 4 74 9.75e-17 79.7
MS.gene045133.t1 AT5G01390 52.778 72 32 1 81 150 3 74 1.45e-16 80.1
MS.gene045133.t1 AT3G47940 52.703 74 32 1 81 151 3 76 2.49e-16 80.5
MS.gene045133.t1 AT3G47940 24.865 185 131 5 238 419 160 339 6.49e-12 67.0
MS.gene045133.t1 AT1G59725 50.000 76 35 1 81 153 3 78 5.13e-16 79.3
MS.gene045133.t1 AT1G59725 27.692 130 90 3 292 419 194 321 4.74e-11 64.3
MS.gene045133.t1 AT1G59980 59.375 64 25 1 84 146 25 88 2.40e-15 77.8
MS.gene045133.t1 AT5G59610 46.753 77 41 0 66 142 57 133 3.27e-15 75.9
MS.gene045133.t1 AT1G59980 59.375 64 25 1 84 146 25 88 3.67e-15 77.4
MS.gene045133.t1 AT5G18140 52.381 63 30 0 82 144 77 139 6.21e-15 75.9
MS.gene045133.t1 AT1G56300 48.529 68 30 2 81 143 12 79 6.79e-15 71.2
MS.gene045133.t1 AT5G59610 46.753 77 41 0 66 142 57 133 7.94e-15 74.7
MS.gene045133.t1 AT5G59610 46.753 77 41 0 66 142 57 133 7.94e-15 74.7
MS.gene045133.t1 AT5G59610 46.753 77 41 0 66 142 57 133 8.67e-15 74.7
MS.gene045133.t1 AT5G59610 46.753 77 41 0 66 142 57 133 8.67e-15 74.7
MS.gene045133.t1 AT1G56300 50.000 66 28 2 83 143 14 79 1.55e-14 71.2
MS.gene045133.t1 AT2G41000 44.086 93 41 3 81 167 2 89 3.26e-14 72.0
MS.gene045133.t1 AT3G57340 38.095 105 56 2 77 172 108 212 4.36e-14 73.9
MS.gene045133.t1 AT3G57340 38.095 105 56 2 77 172 108 212 4.36e-14 73.9
MS.gene045133.t1 AT5G49060 49.315 73 36 1 74 146 92 163 5.97e-14 73.2
MS.gene045133.t1 AT5G49060 49.315 73 36 1 74 146 92 163 5.97e-14 73.2
MS.gene045133.t1 AT5G05750 35.185 108 62 1 77 176 109 216 6.16e-14 72.4
MS.gene045133.t1 AT2G41000 44.565 92 40 3 82 167 3 89 7.93e-14 70.1
MS.gene045133.t1 AT1G24120 56.061 66 28 1 82 146 20 85 1.14e-13 73.2
MS.gene045133.t1 AT1G68370 54.286 70 31 1 82 150 17 86 1.89e-13 72.0
MS.gene045133.t1 AT5G03160 50.769 65 30 1 82 144 370 434 2.95e-13 72.0
MS.gene045133.t1 AT4G39150 35.833 120 69 3 80 196 4 118 2.98e-13 71.2
MS.gene045133.t1 AT4G39150 35.833 120 69 3 80 196 4 118 2.98e-13 71.2
MS.gene045133.t1 AT4G39150 35.833 120 69 3 80 196 4 118 2.98e-13 71.2
MS.gene045133.t1 AT4G13830 42.683 82 42 2 80 158 64 143 1.97e-12 66.2
MS.gene045133.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.09e-12 68.6
MS.gene045133.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.09e-12 68.6
MS.gene045133.t1 AT4G13830 42.683 82 42 2 80 158 64 143 2.19e-12 65.1
MS.gene045133.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.26e-12 68.6
MS.gene045133.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.26e-12 68.6
MS.gene045133.t1 AT2G21510 43.836 73 40 1 80 151 4 76 2.36e-12 68.2
MS.gene045133.t1 AT5G06910 38.043 92 51 2 84 174 31 117 5.52e-12 66.6
MS.gene045133.t1 AT4G13830 42.683 82 42 2 80 158 64 143 5.74e-12 65.1
MS.gene045133.t1 AT1G76700 48.611 72 36 1 80 150 4 75 5.83e-12 67.4
MS.gene045133.t1 AT5G16650 50.000 66 32 1 82 146 11 76 8.22e-12 62.8
MS.gene045133.t1 AT2G17880 40.909 88 46 3 79 163 65 149 1.21e-11 63.2
MS.gene045133.t1 AT2G35720 43.836 73 37 1 82 150 15 87 1.26e-11 67.0
MS.gene045133.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.62e-11 66.6
MS.gene045133.t1 AT5G16650 50.794 63 30 1 82 143 11 73 1.66e-11 63.2
MS.gene045133.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.90e-11 66.6
MS.gene045133.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.90e-11 66.6
MS.gene045133.t1 AT1G79940 43.210 81 43 2 82 161 99 177 1.90e-11 66.6
MS.gene045133.t1 AT1G21080 38.542 96 49 2 80 174 4 90 3.25e-11 65.1
MS.gene045133.t1 AT4G37480 46.154 65 32 1 84 145 58 122 3.33e-11 65.5
MS.gene045133.t1 AT1G21080 45.833 72 38 1 80 150 4 75 3.53e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT5G37380 47.059 68 36 0 77 144 61 128 3.69e-11 65.1
MS.gene045133.t1 AT4G09350 41.772 79 44 1 67 143 91 169 4.97e-11 63.2
MS.gene045133.t1 AT2G25560 41.758 91 48 1 76 166 60 145 5.24e-11 65.1
MS.gene045133.t1 AT1G72070 44.262 61 32 1 73 133 30 88 5.40e-11 60.5
MS.gene045133.t1 AT4G36040 38.053 113 54 4 38 144 29 131 6.42e-11 61.2
MS.gene045133.t1 AT3G12170 34.188 117 64 4 66 174 24 135 7.67e-11 63.2
MS.gene045133.t1 AT1G72070 45.000 60 31 1 73 132 30 87 7.79e-11 58.9
MS.gene045133.t1 AT3G12170 38.043 92 51 3 84 174 13 99 9.96e-11 62.4

Find 137 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGATTCTGGTAGCCGTTTA+AGG 0.182163 3.1:-69781277 MS.gene045133:CDS
TTTGGGGAGGCAGGGCTTAA+AGG 0.247726 3.1:-69781833 MS.gene045133:CDS
CGGTCCATATATGACAAATT+TGG 0.261820 3.1:-69781851 MS.gene045133:CDS
TCACATCTGGATGATAATTT+CGG 0.265510 3.1:+69782373 None:intergenic
TACAAGCAGGATAAGCTTTA+TGG 0.275354 3.1:-69784055 MS.gene045133:CDS
GGTCCATATATGACAAATTT+GGG 0.277603 3.1:-69781850 MS.gene045133:CDS
CTCCCCAAATTTGTCATATA+TGG 0.277754 3.1:+69781847 None:intergenic
AATCTTGGGGACTACAATTA+AGG 0.292885 3.1:-69781114 MS.gene045133:CDS
CTTAAAGGTTCACCGGGATT+TGG 0.302482 3.1:-69781818 MS.gene045133:CDS
GTCTTATATTGATGCAATCT+TGG 0.313538 3.1:-69781129 MS.gene045133:CDS
ACCCCTTGCAGTACATGTTC+TGG 0.319612 3.1:-69781353 MS.gene045133:CDS
GTTCCAGCCGGTGTGGATTC+TGG 0.326305 3.1:-69781290 MS.gene045133:CDS
TTGTAAATGTTTCAGCTTAC+CGG 0.333265 3.1:-69782404 MS.gene045133:intron
TCTCGTTTAAGCACGGGATC+CGG 0.337729 3.1:+69781182 None:intergenic
CACATCTGGATGATAATTTC+GGG 0.342735 3.1:+69782374 None:intergenic
TGGTGCAGAAGAGAAATTTA+AGG 0.344525 3.1:-69781999 MS.gene045133:CDS
TCTTATATTGATGCAATCTT+GGG 0.353264 3.1:-69781128 MS.gene045133:CDS
TAGATGGCAGTTACACCTTT+TGG 0.360482 3.1:-69785582 MS.gene045133:CDS
TTCCAGAGTTACCTTCATTT+CGG 0.363610 3.1:+69781252 None:intergenic
CTTCATTTCGGACCCTTAAA+CGG 0.373498 3.1:+69781264 None:intergenic
CTTGGCTATTGTGGTGGATC+TGG 0.376282 3.1:+69785515 None:intergenic
ATTAAGGTTCCGACTGTAGA+TGG 0.378346 3.1:-69781098 MS.gene045133:CDS
GGATTCTGGTAGCCGTTTAA+GGG 0.391936 3.1:-69781276 MS.gene045133:CDS
TGTGGTACTTGCGATGGTTC+AGG 0.397485 3.1:-69781515 MS.gene045133:CDS
ATGTAACACATGTGGTGGTC+AGG 0.403113 3.1:-69781465 MS.gene045133:CDS
AGCGACTCAAACAGATCAAA+AGG 0.403699 3.1:+69781680 None:intergenic
GATAATTTCGGGCTAGCTTC+CGG 0.405239 3.1:+69782385 None:intergenic
AATACTCACTTGTTCACATC+TGG 0.408035 3.1:+69782360 None:intergenic
CTCGTTTAAGCACGGGATCC+GGG 0.419118 3.1:+69781183 None:intergenic
CAGGACTACTACACCGTCCT+TGG 0.424406 3.1:-69783767 MS.gene045133:CDS
ACCAGGATCAACACTTGTTA+TGG 0.426673 3.1:-69781042 MS.gene045133:CDS
GTGGATTTGAAAATCCCATC+TGG 0.440632 3.1:-69781071 MS.gene045133:CDS
CCCCTTGCAGTACATGTTCT+GGG 0.441535 3.1:-69781352 MS.gene045133:CDS
TATGACAAATTTGGGGAGGC+AGG 0.442220 3.1:-69781842 MS.gene045133:CDS
GTACATGTTCTGGGGATGGC+CGG 0.445163 3.1:-69781343 MS.gene045133:CDS
CATCTGGATGATTTAGTCCC+TGG 0.446833 3.1:+69781485 None:intergenic
ACTTTATGCTGCAGAGATCC+TGG 0.448540 3.1:-69782019 MS.gene045133:intron
TGCTGAATAAGAAGAATATG+AGG 0.451840 3.1:-69781001 MS.gene045133:CDS
CTGTTTGAGTCGCTATTTGA+GGG 0.452801 3.1:-69781671 MS.gene045133:CDS
AGGACTACTACACCGTCCTT+GGG 0.453339 3.1:-69783766 MS.gene045133:CDS
TAGTACATCAGCTACTCAAT+GGG 0.464566 3.1:-69785559 MS.gene045133:CDS
GGAAAGAAAGGTGGTTCTCC+TGG 0.465052 3.1:-69781233 MS.gene045133:CDS
TTAAATTTCTCTTCTGCACC+AGG 0.476100 3.1:+69782001 None:intergenic
ACCACCACATGTGTTACATC+TGG 0.476919 3.1:+69781469 None:intergenic
TGCTCGTCTTGCAATGGGAC+TGG 0.478835 3.1:-69781386 MS.gene045133:CDS
TGACTTGCTCGTCTTGCAAT+GGG 0.482426 3.1:-69781391 MS.gene045133:CDS
CGTTTAAGGGTCCGAAATGA+AGG 0.488601 3.1:-69781263 MS.gene045133:CDS
TCTGTTTGAGTCGCTATTTG+AGG 0.489195 3.1:-69781672 MS.gene045133:CDS
ATGACTTGCTCGTCTTGCAA+TGG 0.491631 3.1:-69781392 MS.gene045133:CDS
ATGGTCGCAGCAGACAATCT+TGG 0.494344 3.1:-69781643 MS.gene045133:CDS
TGCATCGTCGAAGGGGATCA+AGG 0.494975 3.1:-69783966 MS.gene045133:CDS
CTACCAGAATCCACACCGGC+TGG 0.495088 3.1:+69781287 None:intergenic
GAAGGTAACTCTGGAAAGAA+AGG 0.495407 3.1:-69781245 MS.gene045133:CDS
CACTCAAACAAGGACTCCAT+TGG 0.500647 3.1:-69781432 MS.gene045133:CDS
AAAGGTTCACCGGGATTTGG+TGG 0.502293 3.1:-69781815 MS.gene045133:CDS
GTTCTGGGGATGGCCGGGTG+AGG 0.503033 3.1:-69781337 MS.gene045133:CDS
TGTTGTTCTTGAAGTTATCC+CGG 0.507023 3.1:-69781201 MS.gene045133:CDS
TGGAAAAGGAGATAGAGATT+AGG 0.510570 3.1:-69781550 MS.gene045133:CDS
GGTGTCTTCTCGTTTAAGCA+CGG 0.510856 3.1:+69781175 None:intergenic
TACATGTTCTGGGGATGGCC+GGG 0.512446 3.1:-69781342 MS.gene045133:CDS
GTAGTACATCAGCTACTCAA+TGG 0.516566 3.1:-69785560 MS.gene045133:CDS
AAGGTTCACCGGGATTTGGT+GGG 0.517220 3.1:-69781814 MS.gene045133:CDS
TCTTGGAATGGAGCAATGAA+TGG 0.519565 3.1:-69781626 MS.gene045133:CDS
GTGTCTTCTCGTTTAAGCAC+GGG 0.522378 3.1:+69781176 None:intergenic
GATCCTGGTTGTGTCCCAGA+TGG 0.522621 3.1:+69781056 None:intergenic
ACTAAATCTGAAATTAAGAC+TGG 0.522708 3.1:-69783728 MS.gene045133:intron
TTTCTTGCAGTGCTACAAGC+AGG 0.523918 3.1:-69784068 MS.gene045133:intron
TGCAGTACATGTTCTGGGGA+TGG 0.526866 3.1:-69781347 MS.gene045133:CDS
GTGTCTTGATGATGCAAACT+TGG 0.526872 3.1:+69785497 None:intergenic
CACATGTGGTGGTCAGGGAC+GGG 0.527198 3.1:-69781459 MS.gene045133:CDS
GCCATAACAAGTGTTGATCC+TGG 0.527492 3.1:+69781041 None:intergenic
GGTTCACCGGGATTTGGTGG+GGG 0.527719 3.1:-69781812 MS.gene045133:CDS
AAAACTGATTGAGGAACTCT+CGG 0.528888 3.1:-69780919 MS.gene045133:CDS
TGAGTCGCTATTTGAGGGCA+TGG 0.529744 3.1:-69781666 MS.gene045133:CDS
ATCCTGGTTGTGTCCCAGAT+GGG 0.532879 3.1:+69781057 None:intergenic
ATCCCATCTGGGACACAACC+AGG 0.538117 3.1:-69781059 MS.gene045133:CDS
TGATGCAAACTTGGCTATTG+TGG 0.538121 3.1:+69785506 None:intergenic
ACACTTGTTATGGCAAAGAA+AGG 0.539668 3.1:-69781032 MS.gene045133:CDS
TCGCTATTTGAGGGCATGGA+TGG 0.540022 3.1:-69781662 MS.gene045133:CDS
ATGACAAATTTGGGGAGGCA+GGG 0.541510 3.1:-69781841 MS.gene045133:CDS
GTAGCTGATGTACTACCAAA+AGG 0.543027 3.1:+69785567 None:intergenic
ATCAAACTTTGCATCGTCGA+AGG 0.545133 3.1:-69783975 MS.gene045133:CDS
ACTCAAACAAGGACTCCATT+GGG 0.546387 3.1:-69781431 MS.gene045133:CDS
CGCAGCAGACAATCTTGGAA+TGG 0.550184 3.1:-69781638 MS.gene045133:CDS
TTTACAAGAATATAAAATGT+TGG 0.551313 3.1:+69781154 None:intergenic
CGATGAGAGAAAACTGATTG+AGG 0.553553 3.1:-69780928 MS.gene045133:CDS
GTCCGAAATGAAGGTAACTC+TGG 0.554384 3.1:-69781254 MS.gene045133:CDS
TCAAACTTTGCATCGTCGAA+GGG 0.557101 3.1:-69783974 MS.gene045133:CDS
AGGTTCACCGGGATTTGGTG+GGG 0.558467 3.1:-69781813 MS.gene045133:CDS
ACACATGTGGTGGTCAGGGA+CGG 0.560533 3.1:-69781460 MS.gene045133:CDS
CCCCAGAACATGTACTGCAA+GGG 0.565096 3.1:+69781351 None:intergenic
GGCAGGGCTTAAAGGTTCAC+CGG 0.569076 3.1:-69781825 MS.gene045133:CDS
ATATTCTTCTTATTCAGCAG+AGG 0.569920 3.1:+69781005 None:intergenic
GGGAATTCGTCCTCAGATTG+TGG 0.570156 3.1:-69785538 MS.gene045133:CDS
GCTGAATAAGAAGAATATGA+GGG 0.578910 3.1:-69781000 MS.gene045133:CDS
AGCAAAGGCAAGACTGCCGC+CGG 0.579260 3.1:-69780891 MS.gene045133:CDS
GCGACTCAAACAGATCAAAA+GGG 0.581128 3.1:+69781681 None:intergenic
TGTAACACATGTGGTGGTCA+GGG 0.583052 3.1:-69781464 MS.gene045133:CDS
TGAACCTATATTAAAACGCA+AGG 0.584026 3.1:+69783999 None:intergenic
TCTTGTCAGATGATGAGAAA+CGG 0.584943 3.1:-69781871 MS.gene045133:CDS
TCCCCAGAACATGTACTGCA+AGG 0.589752 3.1:+69781350 None:intergenic
GACTGCTGAAAGATACCCAA+TGG 0.591743 3.1:+69781416 None:intergenic
AACAAAGCGGATAAGTCTCA+AGG 0.598548 3.1:-69781312 MS.gene045133:CDS
GCAGGGCTTAAAGGTTCACC+GGG 0.602555 3.1:-69781824 MS.gene045133:CDS
GGTTCCGACTGTAGATGGAA+TGG 0.604592 3.1:-69781093 MS.gene045133:CDS
CACGAAATATCATCTCATAC+CGG 0.605585 3.1:+69780872 None:intergenic
GATGGTTCAGGAGCTAAACC+AGG 0.608802 3.1:-69781503 MS.gene045133:CDS
AGAACAACAAAGAGGTCACC+AGG 0.612651 3.1:+69781215 None:intergenic
TGGATTTGAAAATCCCATCT+GGG 0.615278 3.1:-69781070 MS.gene045133:CDS
CCCAGAACATGTACTGCAAG+GGG 0.617559 3.1:+69781352 None:intergenic
TCTCAAGGTTCCAGCCGGTG+TGG 0.618146 3.1:-69781297 MS.gene045133:CDS
ATAAGTCTCAAGGTTCCAGC+CGG 0.620771 3.1:-69781302 MS.gene045133:CDS
CTTATATTGATGCAATCTTG+GGG 0.623095 3.1:-69781127 MS.gene045133:CDS
GACGGGTTGTCACTCAAACA+AGG 0.625091 3.1:-69781442 MS.gene045133:CDS
TGCAAACTTGGCTATTGTGG+TGG 0.627230 3.1:+69785509 None:intergenic
GGTAACTCTGGAAAGAAAGG+TGG 0.630205 3.1:-69781242 MS.gene045133:CDS
GAACTCTCGGAGTTGAGCAA+AGG 0.632985 3.1:-69780906 MS.gene045133:CDS
GAGAAGTGTGGTACTTGCGA+TGG 0.635595 3.1:-69781521 MS.gene045133:CDS
TCCAGATGTAACACATGTGG+TGG 0.637762 3.1:-69781470 MS.gene045133:CDS
TCCACCATTCCATCTACAGT+CGG 0.638944 3.1:+69781089 None:intergenic
GGAAATCAGTAATGCGTACG+AGG 0.643998 3.1:-69781978 MS.gene045133:intron
GGACTACTACACCGTCCTTG+GGG 0.645334 3.1:-69783765 MS.gene045133:CDS
CCCTTGCAGTACATGTTCTG+GGG 0.646072 3.1:-69781351 MS.gene045133:CDS
GTGGATCTGGCCACAATCTG+AGG 0.648017 3.1:+69785528 None:intergenic
TAACTTCAAGAACAACAAAG+AGG 0.649565 3.1:+69781207 None:intergenic
CAAACTTTGCATCGTCGAAG+GGG 0.657260 3.1:-69783973 MS.gene045133:CDS
CATATATGACAAATTTGGGG+AGG 0.659382 3.1:-69781846 MS.gene045133:CDS
TCCGACTGTAGATGGAATGG+TGG 0.660929 3.1:-69781090 MS.gene045133:CDS
GTCCATATATGACAAATTTG+GGG 0.662707 3.1:-69781849 MS.gene045133:CDS
CTGAATAAGAAGAATATGAG+GGG 0.668517 3.1:-69780999 MS.gene045133:CDS
TCATCCAGATGTAACACATG+TGG 0.669998 3.1:-69781473 MS.gene045133:CDS
ATTAGGCGACTAGAGAAGTG+TGG 0.694061 3.1:-69781533 MS.gene045133:CDS
ATGGTTCAGGAGCTAAACCA+GGG 0.708190 3.1:-69781502 MS.gene045133:CDS
GCCGGGTGAGGAAAACAAAG+CGG 0.718931 3.1:-69781325 MS.gene045133:CDS
GAAATATCATCTCATACCGG+CGG 0.725473 3.1:+69780875 None:intergenic
AGTACATCAGCTACTCAATG+GGG 0.730358 3.1:-69785558 MS.gene045133:CDS
ACGGCTACCAGAATCCACAC+CGG 0.739891 3.1:+69781283 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCATTTAACTTTTTTTTT+TGG - chr3.1:69783881-69783900 MS.gene045133:intron 10.0%
!! CAAGAGATATATAATATAAA+AGG + chr3.1:69782876-69782895 None:intergenic 15.0%
!! TATATTTCATATTCATCAAA+TGG + chr3.1:69781770-69781789 None:intergenic 15.0%
!! TATTAAATGAGATAATCATT+CGG + chr3.1:69783473-69783492 None:intergenic 15.0%
!! TTAAATGTAAAAAATCCTAA+AGG - chr3.1:69781908-69781927 MS.gene045133:intron 15.0%
!! TTTACAAGAATATAAAATGT+TGG + chr3.1:69785309-69785328 None:intergenic 15.0%
!!! AATTTTGAAAGTTTCAAATT+TGG + chr3.1:69783724-69783743 None:intergenic 15.0%
!!! ATTTTCATTCTTCTAAAATA+CGG - chr3.1:69781971-69781990 MS.gene045133:intron 15.0%
!!! TCTGTTTTTTTTTTTAACTT+AGG - chr3.1:69782051-69782070 MS.gene045133:intron 15.0%
!! AATTATGCAACTAGAAATTA+TGG + chr3.1:69784358-69784377 None:intergenic 20.0%
!! AGTAAATGTGAATAATTAAG+CGG + chr3.1:69781492-69781511 None:intergenic 20.0%
!! ATGAATTTGAAGAATCAAAT+AGG - chr3.1:69781875-69781894 MS.gene045133:CDS 20.0%
!! TAAAGTGAATACACATATAT+AGG + chr3.1:69784427-69784446 None:intergenic 20.0%
!! TACTAATAAAATGTTTGTGA+AGG - chr3.1:69782930-69782949 MS.gene045133:intron 20.0%
!! TGTAAAATCTTTGTGATTAT+AGG - chr3.1:69784746-69784765 MS.gene045133:intron 20.0%
!! TTAAAATTCTCCATAATCTT+TGG + chr3.1:69784700-69784719 None:intergenic 20.0%
!!! ATTTTGTTTAATGCCAAAAA+AGG - chr3.1:69783675-69783694 MS.gene045133:intron 20.0%
!!! GGATTTTTTACATTTAACAA+TGG + chr3.1:69781905-69781924 None:intergenic 20.0%
!!! TAAATGTTTAGTTTGAACTT+CGG + chr3.1:69783861-69783880 None:intergenic 20.0%
!!! TCTTATACCAAACTTTTTTA+TGG + chr3.1:69781079-69781098 None:intergenic 20.0%
!!! TTAATTCTTGTTCTATGTTT+TGG + chr3.1:69783010-69783029 None:intergenic 20.0%
!!! TTGCATAATTTTTTTTCACA+TGG - chr3.1:69784368-69784387 MS.gene045133:intron 20.0%
!!! TTTTAGAAGAATGAAAATAG+AGG + chr3.1:69781969-69781988 None:intergenic 20.0%
!!! TTTTCTCAATCAATTCTTTA+GGG - chr3.1:69781655-69781674 MS.gene045133:CDS 20.0%
!!! TTTTTCTCAATCAATTCTTT+AGG - chr3.1:69781654-69781673 MS.gene045133:CDS 20.0%
! ACCTAAATACAGAAGAATTT+AGG + chr3.1:69783208-69783227 None:intergenic 25.0%
! GTAAATGTGAATAATTAAGC+GGG + chr3.1:69781491-69781510 None:intergenic 25.0%
! TAAATGTGAATAATTAAGCG+GGG + chr3.1:69781490-69781509 None:intergenic 25.0%
! TAGAAAAGGAAAAAAAGAGT+GGG + chr3.1:69784186-69784205 None:intergenic 25.0%
! TAGATATTCAGCCAATATAT+TGG + chr3.1:69782658-69782677 None:intergenic 25.0%
! TATCAGAAACATCAATTACT+CGG - chr3.1:69783943-69783962 MS.gene045133:intron 25.0%
! TATGAACTAACCATGAATTA+GGG + chr3.1:69784537-69784556 None:intergenic 25.0%
! TCAAATTCATTGATGAGAAT+TGG + chr3.1:69781865-69781884 None:intergenic 25.0%
! TCCTAAATTCTTCTGTATTT+AGG - chr3.1:69783204-69783223 MS.gene045133:intron 25.0%
! TCTCATTGAAAAGAAATATC+CGG - chr3.1:69781182-69781201 MS.gene045133:CDS 25.0%
! TCTCTTGTATATTACTTTGA+AGG - chr3.1:69781019-69781038 MS.gene045133:CDS 25.0%
! TCTTATATTGATGCAATCTT+GGG - chr3.1:69785332-69785351 MS.gene045133:intron 25.0%
! TGAAAGTTTCAAATTTGGTT+TGG + chr3.1:69783719-69783738 None:intergenic 25.0%
! TTATGAACTAACCATGAATT+AGG + chr3.1:69784538-69784557 None:intergenic 25.0%
! TTGGAACTTCAATAAAATCA+CGG - chr3.1:69781377-69781396 MS.gene045133:CDS 25.0%
!! ACTAAATCTGAAATTAAGAC+TGG - chr3.1:69782732-69782751 MS.gene045133:intron 25.0%
!! ATGTAACTATAATCCTTTTC+AGG - chr3.1:69784566-69784585 MS.gene045133:intron 25.0%
!! TAATGCAGTGATTTAAAATG+AGG + chr3.1:69782127-69782146 None:intergenic 25.0%
!! TGATTTTATTGAAGTTCCAA+AGG + chr3.1:69781377-69781396 None:intergenic 25.0%
!!! AACTTTAAAGAAGCTGTTTT+CGG - chr3.1:69784885-69784904 MS.gene045133:intron 25.0%
!!! AGAGGCATTGATTATTAAAT+AGG + chr3.1:69781951-69781970 None:intergenic 25.0%
!!! TTTTTTTTGGTAATCAATGC+AGG - chr3.1:69783894-69783913 MS.gene045133:intron 25.0%
AAAACCAGACAATTGACTAA+TGG + chr3.1:69781637-69781656 None:intergenic 30.0%
AAAACTGTTCCTAATGAGTA+AGG + chr3.1:69782326-69782345 None:intergenic 30.0%
AAATCATAACAGTCAGAGAA+GGG + chr3.1:69782772-69782791 None:intergenic 30.0%
AAATTCTCCATAATCTTTGG+AGG + chr3.1:69784697-69784716 None:intergenic 30.0%
AACAAAATAAACAGCCGTTT+AGG + chr3.1:69783663-69783682 None:intergenic 30.0%
ACAAAATAAACAGCCGTTTA+GGG + chr3.1:69783662-69783681 None:intergenic 30.0%
ACACAAGAATCAATTCTACT+TGG + chr3.1:69781463-69781482 None:intergenic 30.0%
ACTATGACCATCCAATATAT+TGG - chr3.1:69782644-69782663 MS.gene045133:intron 30.0%
AGAAAGCAGATAACTTCAAT+GGG + chr3.1:69784141-69784160 None:intergenic 30.0%
ATATTCTTCTTATTCAGCAG+AGG + chr3.1:69785458-69785477 None:intergenic 30.0%
ATCAGAAACATCAATTACTC+GGG - chr3.1:69783944-69783963 MS.gene045133:intron 30.0%
ATGAGATAATCATTCGGATT+TGG + chr3.1:69783467-69783486 None:intergenic 30.0%
ATTGTGATTAAATTGCGTTG+TGG - chr3.1:69782098-69782117 MS.gene045133:intron 30.0%
CTAGAAAAGGAAAAAAAGAG+TGG + chr3.1:69784187-69784206 None:intergenic 30.0%
CTGAATAAGAAGAATATGAG+GGG - chr3.1:69785461-69785480 MS.gene045133:intron 30.0%
CTTAATACCAATACTGAAGA+AGG - chr3.1:69783515-69783534 MS.gene045133:intron 30.0%
CTTATATTGATGCAATCTTG+GGG - chr3.1:69785333-69785352 MS.gene045133:intron 30.0%
GCAATAGTGAAATCTAGAAA+AGG + chr3.1:69784200-69784219 None:intergenic 30.0%
GCTATAGCCATAAAAAAGTT+TGG - chr3.1:69781069-69781088 MS.gene045133:CDS 30.0%
GCTGAATAAGAAGAATATGA+GGG - chr3.1:69785460-69785479 MS.gene045133:intron 30.0%
GGTCCATATATGACAAATTT+GGG - chr3.1:69784610-69784629 MS.gene045133:intron 30.0%
GTCCATATATGACAAATTTG+GGG - chr3.1:69784611-69784630 MS.gene045133:intron 30.0%
GTCTTATATTGATGCAATCT+TGG - chr3.1:69785331-69785350 MS.gene045133:intron 30.0%
TAACAATGCAATGATACCAT+GGG + chr3.1:69784026-69784045 None:intergenic 30.0%
TAACTTCAAGAACAACAAAG+AGG + chr3.1:69785256-69785275 None:intergenic 30.0%
TAGAAAGCAGATAACTTCAA+TGG + chr3.1:69784142-69784161 None:intergenic 30.0%
TATTCAGCCAATATATTGGA+TGG + chr3.1:69782654-69782673 None:intergenic 30.0%
TCAAGAAGAATACTTTCACA+AGG + chr3.1:69782611-69782630 None:intergenic 30.0%
TCACATCTGGATGATAATTT+CGG + chr3.1:69784090-69784109 None:intergenic 30.0%
TCCTAATCATTCGTAGTTAA+CGG + chr3.1:69783161-69783180 None:intergenic 30.0%
TCTAGATTTCACTATTGCTA+TGG - chr3.1:69784202-69784221 MS.gene045133:intron 30.0%
TGAACCTATATTAAAACGCA+AGG + chr3.1:69782464-69782483 None:intergenic 30.0%
TGCTGAATAAGAAGAATATG+AGG - chr3.1:69785459-69785478 MS.gene045133:intron 30.0%
TTAACAATGCAATGATACCA+TGG + chr3.1:69784027-69784046 None:intergenic 30.0%
TTAATGCCAAAAAAGGACAT+GGG - chr3.1:69783682-69783701 MS.gene045133:intron 30.0%
TTATTGAAGTTCCAAAGGTT+GGG + chr3.1:69781372-69781391 None:intergenic 30.0%
TTCAGATAAAATGTCTGTGA+AGG - chr3.1:69783538-69783557 MS.gene045133:intron 30.0%
TTGCTTTACAACATACAACA+AGG + chr3.1:69783385-69783404 None:intergenic 30.0%
TTGTAAATGTTTCAGCTTAC+CGG - chr3.1:69784056-69784075 MS.gene045133:CDS 30.0%
TTGTGATTAAATTGCGTTGT+GGG - chr3.1:69782099-69782118 MS.gene045133:intron 30.0%
TTTAATGCCAAAAAAGGACA+TGG - chr3.1:69783681-69783700 MS.gene045133:intron 30.0%
TTTATTGAAGTTCCAAAGGT+TGG + chr3.1:69781373-69781392 None:intergenic 30.0%
! ACAAATTGGTAGCACTATTT+AGG - chr3.1:69781728-69781747 MS.gene045133:intron 30.0%
! ATCACAGCTTTGATAACAAA+TGG + chr3.1:69783098-69783117 None:intergenic 30.0%
! GATTTTGTTACTCCAATTGT+CGG - chr3.1:69781103-69781122 MS.gene045133:CDS 30.0%
!! AGATTTTAGAAGAGACGATT+TGG + chr3.1:69781546-69781565 None:intergenic 30.0%
!! GAAAGTATTCTTCTTGAAGT+TGG - chr3.1:69782614-69782633 MS.gene045133:intron 30.0%
!! GATTCCTTGCGTTTTAATAT+AGG - chr3.1:69782457-69782476 MS.gene045133:intron 30.0%
!! TCATTCTTCTAAAATACGGA+GGG - chr3.1:69781975-69781994 MS.gene045133:intron 30.0%
!! TTCATTCTTCTAAAATACGG+AGG - chr3.1:69781974-69781993 MS.gene045133:intron 30.0%
!!! AACTTTTTTATGGCTATAGC+CGG + chr3.1:69781069-69781088 None:intergenic 30.0%
!!! ATTCGAGTTTTGGTTTATGT+TGG + chr3.1:69783797-69783816 None:intergenic 30.0%
AAAACTGATTGAGGAACTCT+CGG - chr3.1:69785541-69785560 MS.gene045133:CDS 35.0%
AACAATGCAATGATACCATG+GGG + chr3.1:69784025-69784044 None:intergenic 35.0%
AACGCATCAACTAATGATGA+TGG + chr3.1:69782799-69782818 None:intergenic 35.0%
AACTACGAATGATTAGGATC+AGG - chr3.1:69783163-69783182 MS.gene045133:intron 35.0%
AATACTCACTTGTTCACATC+TGG + chr3.1:69784103-69784122 None:intergenic 35.0%
AATCTTGGGGACTACAATTA+AGG - chr3.1:69785346-69785365 MS.gene045133:intron 35.0%
ACTACGAATGATTAGGATCA+GGG - chr3.1:69783164-69783183 MS.gene045133:intron 35.0%
ACTAGAAATTATGGCATGAC+AGG + chr3.1:69784349-69784368 None:intergenic 35.0%
AGCAAAAAAGGTTGAACTTG+GGG + chr3.1:69782434-69782453 None:intergenic 35.0%
AGCACTGCAAGAAAAATGAT+TGG + chr3.1:69782386-69782405 None:intergenic 35.0%
ATCCATGAAATCGCACAAAT+TGG - chr3.1:69781714-69781733 MS.gene045133:intron 35.0%
ATCTGAACCTTCTTCAGTAT+TGG + chr3.1:69783525-69783544 None:intergenic 35.0%
ATGCAAAGATTTGTAACTGC+AGG - chr3.1:69783437-69783456 MS.gene045133:intron 35.0%
CAAAATAAACAGCCGTTTAG+GGG + chr3.1:69783661-69783680 None:intergenic 35.0%
CAAATCATAACAGTCAGAGA+AGG + chr3.1:69782773-69782792 None:intergenic 35.0%
CAACTCACTATTCAGATGTT+AGG - chr3.1:69782225-69782244 MS.gene045133:intron 35.0%
CAAGTTACCTCCAAAGATTA+TGG - chr3.1:69784687-69784706 MS.gene045133:intron 35.0%
CACATCTGGATGATAATTTC+GGG + chr3.1:69784089-69784108 None:intergenic 35.0%
CACTATTGCTATGGACAAAA+TGG - chr3.1:69784211-69784230 MS.gene045133:intron 35.0%
CATATATGACAAATTTGGGG+AGG - chr3.1:69784614-69784633 MS.gene045133:intron 35.0%
CGGTCCATATATGACAAATT+TGG - chr3.1:69784609-69784628 MS.gene045133:intron 35.0%
CTCCCCAAATTTGTCATATA+TGG + chr3.1:69784616-69784635 None:intergenic 35.0%
CTGAAAAATTCCACTTCTCT+TGG + chr3.1:69781431-69781450 None:intergenic 35.0%
CTTCATATAACAGGCAATTC+AGG + chr3.1:69784303-69784322 None:intergenic 35.0%
GAGCAAAAAAGGTTGAACTT+GGG + chr3.1:69782435-69782454 None:intergenic 35.0%
GATGCTATGTGTGATTTACT+TGG - chr3.1:69783987-69784006 MS.gene045133:CDS 35.0%
GATTCCATTAGTCAATTGTC+TGG - chr3.1:69781630-69781649 MS.gene045133:CDS 35.0%
GCTAAACGACTTCATATAAC+AGG + chr3.1:69784312-69784331 None:intergenic 35.0%
TAAAATCTGTATCAATCGCC+TGG - chr3.1:69781558-69781577 MS.gene045133:CDS 35.0%
TAATCAATGCAGGAAAGGTT+TGG - chr3.1:69783904-69783923 MS.gene045133:intron 35.0%
TAATCGTCTTGATTGCTCTT+TGG - chr3.1:69783743-69783762 MS.gene045133:CDS 35.0%
TAATGCCAAAAAAGGACATG+GGG - chr3.1:69783683-69783702 MS.gene045133:intron 35.0%
TACAAGCAGGATAAGCTTTA+TGG - chr3.1:69782405-69782424 MS.gene045133:intron 35.0%
TACCAATTTGTGCGATTTCA+TGG + chr3.1:69781719-69781738 None:intergenic 35.0%
TACCGGAGTTGAGAAAAAAT+GGG - chr3.1:69781244-69781263 MS.gene045133:CDS 35.0%
TAGCAACAAGCATTATCAAG+TGG + chr3.1:69783615-69783634 None:intergenic 35.0%
TAGTACATCAGCTACTCAAT+GGG - chr3.1:69780901-69780920 MS.gene045133:CDS 35.0%
TCCGTTAACTACGAATGATT+AGG - chr3.1:69783157-69783176 MS.gene045133:intron 35.0%
TCTTGTCAGATGATGAGAAA+CGG - chr3.1:69784589-69784608 MS.gene045133:intron 35.0%
TGAAAAGAAATATCCGGCAA+GGG - chr3.1:69781188-69781207 MS.gene045133:CDS 35.0%
TGCAAAGATTTGTAACTGCA+GGG - chr3.1:69783438-69783457 MS.gene045133:intron 35.0%
TGGAAAAGGAGATAGAGATT+AGG - chr3.1:69784910-69784929 MS.gene045133:intron 35.0%
TGGATTTGAAAATCCCATCT+GGG - chr3.1:69785390-69785409 MS.gene045133:intron 35.0%
TGGTGCAGAAGAGAAATTTA+AGG - chr3.1:69784461-69784480 MS.gene045133:intron 35.0%
TGTTGTTCTTGAAGTTATCC+CGG - chr3.1:69785259-69785278 MS.gene045133:intron 35.0%
TTAAATTTCTCTTCTGCACC+AGG + chr3.1:69784462-69784481 None:intergenic 35.0%
TTCCAGAGTTACCTTCATTT+CGG + chr3.1:69785211-69785230 None:intergenic 35.0%
TTGAAAAGAAATATCCGGCA+AGG - chr3.1:69781187-69781206 MS.gene045133:CDS 35.0%
! CATAATCTTTGGAGGTAACT+TGG + chr3.1:69784689-69784708 None:intergenic 35.0%
! TGTAATCTTTTGCCTAGATG+CGG - chr3.1:69783411-69783430 MS.gene045133:intron 35.0%
! TTGGTATAATCTAAGACACC+CGG + chr3.1:69784238-69784257 None:intergenic 35.0%
! TTGTAATTTTGCCCAACCTT+TGG - chr3.1:69781358-69781377 MS.gene045133:CDS 35.0%
! TTTGGTAATCAATGCAGGAA+AGG - chr3.1:69783899-69783918 MS.gene045133:intron 35.0%
!! ACACTTGTTATGGCAAAGAA+AGG - chr3.1:69785428-69785447 MS.gene045133:intron 35.0%
!! TTAGAAGAGACGATTTGGTT+TGG + chr3.1:69781541-69781560 None:intergenic 35.0%
!!! AAGTTCAACCTTTTTTGCTC+GGG - chr3.1:69782435-69782454 MS.gene045133:intron 35.0%
!!! ACTTTTTTATGGCTATAGCC+GGG + chr3.1:69781068-69781087 None:intergenic 35.0%
!!! CAAGTTCAACCTTTTTTGCT+CGG - chr3.1:69782434-69782453 MS.gene045133:intron 35.0%
!!! TAGAATTTTTTGACACCCCA+AGG + chr3.1:69782713-69782732 None:intergenic 35.0%
AAAACTCGAATCCTTGTACG+TGG - chr3.1:69783806-69783825 MS.gene045133:intron 40.0%
AAATGACATGCTGCAAGCAT+TGG + chr3.1:69784257-69784276 None:intergenic 40.0%
AACAAAGCGGATAAGTCTCA+AGG - chr3.1:69785148-69785167 MS.gene045133:intron 40.0%
AATGCCAAAAAAGGACATGG+GGG - chr3.1:69783684-69783703 MS.gene045133:intron 40.0%
ACAATGCAATGATACCATGG+GGG + chr3.1:69784024-69784043 None:intergenic 40.0%
ACACAACTGACCCTAATTCA+TGG - chr3.1:69784524-69784543 MS.gene045133:intron 40.0%
ACCGGAGTTGAGAAAAAATG+GGG - chr3.1:69781245-69781264 MS.gene045133:CDS 40.0%
ACTCAAACAAGGACTCCATT+GGG - chr3.1:69785029-69785048 MS.gene045133:intron 40.0%
AGCGACTCAAACAGATCAAA+AGG + chr3.1:69784783-69784802 None:intergenic 40.0%
AGTACATCAGCTACTCAATG+GGG - chr3.1:69780902-69780921 MS.gene045133:CDS 40.0%
ATCAAACTTTGCATCGTCGA+AGG - chr3.1:69782485-69782504 MS.gene045133:intron 40.0%
ATTAAGGTTCCGACTGTAGA+TGG - chr3.1:69785362-69785381 MS.gene045133:intron 40.0%
CAATGAGTTTGGCAGAATCA+CGG - chr3.1:69781328-69781347 MS.gene045133:CDS 40.0%
CCAACAGATCCTTACTCATT+AGG - chr3.1:69782314-69782333 MS.gene045133:intron 40.0%
CCTAATGAGTAAGGATCTGT+TGG + chr3.1:69782317-69782336 None:intergenic 40.0%
CGAGCAAAAAAGGTTGAACT+TGG + chr3.1:69782436-69782455 None:intergenic 40.0%
CGATGAGAGAAAACTGATTG+AGG - chr3.1:69785532-69785551 MS.gene045133:CDS 40.0%
CTACCGGAGTTGAGAAAAAA+TGG - chr3.1:69781243-69781262 MS.gene045133:CDS 40.0%
CTCTTTGGTATTGTATTGCG+AGG - chr3.1:69783758-69783777 MS.gene045133:CDS 40.0%
CTGTTTGAGTCGCTATTTGA+GGG - chr3.1:69784789-69784808 MS.gene045133:intron 40.0%
CTTCATTTCGGACCCTTAAA+CGG + chr3.1:69785199-69785218 None:intergenic 40.0%
GATAACTTCAATGGGAAGTG+AGG + chr3.1:69784133-69784152 None:intergenic 40.0%
GCGACTCAAACAGATCAAAA+GGG + chr3.1:69784782-69784801 None:intergenic 40.0%
GTAGCTGATGTACTACCAAA+AGG + chr3.1:69780896-69780915 None:intergenic 40.0%
GTAGTACATCAGCTACTCAA+TGG - chr3.1:69780900-69780919 MS.gene045133:CDS 40.0%
GTGGATTTGAAAATCCCATC+TGG - chr3.1:69785389-69785408 MS.gene045133:intron 40.0%
GTTCAGGGTTTAACCAAAAC+AGG + chr3.1:69781221-69781240 None:intergenic 40.0%
GTTGAAGTGCATGTTGAGAA+CGG - chr3.1:69781305-69781324 MS.gene045133:CDS 40.0%
TCAAACTTTGCATCGTCGAA+GGG - chr3.1:69782486-69782505 MS.gene045133:intron 40.0%
TCATCCAGATGTAACACATG+TGG - chr3.1:69784987-69785006 MS.gene045133:intron 40.0%
TCATCTGACAAGACCTGAAA+AGG + chr3.1:69784582-69784601 None:intergenic 40.0%
TCTGTTTGAGTCGCTATTTG+AGG - chr3.1:69784788-69784807 MS.gene045133:intron 40.0%
TCTTGACAGAGTTAGCTGTT+AGG + chr3.1:69782981-69783000 None:intergenic 40.0%
TCTTGGAATGGAGCAATGAA+TGG - chr3.1:69784834-69784853 MS.gene045133:intron 40.0%
TGATGCAAACTTGGCTATTG+TGG + chr3.1:69780957-69780976 None:intergenic 40.0%
TTATCTGTCATATTGTGCCC+CGG - chr3.1:69781047-69781066 MS.gene045133:CDS 40.0%
TTGCTATGGACAAAATGGTC+CGG - chr3.1:69784216-69784235 MS.gene045133:intron 40.0%
! ACCAGGATCAACACTTGTTA+TGG - chr3.1:69785418-69785437 MS.gene045133:intron 40.0%
! GAAGGTAACTCTGGAAAGAA+AGG - chr3.1:69785215-69785234 MS.gene045133:intron 40.0%
! GTAATCTTTTGCCTAGATGC+GGG - chr3.1:69783412-69783431 MS.gene045133:intron 40.0%
! TTGAGAGGAAGTTTTCCAAG+AGG + chr3.1:69783833-69783852 None:intergenic 40.0%
!! ACGTACAAGGATTCGAGTTT+TGG + chr3.1:69783807-69783826 None:intergenic 40.0%
!! CATTCGTAGTTAACGGACTA+AGG + chr3.1:69783154-69783173 None:intergenic 40.0%
!! GCATCAACTAATGATGATGG+AGG + chr3.1:69782796-69782815 None:intergenic 40.0%
!! GTGTCTTGATGATGCAAACT+TGG + chr3.1:69780966-69780985 None:intergenic 40.0%
!! TAAAGAAGCTGTTTTCGGAG+TGG - chr3.1:69784890-69784909 MS.gene045133:intron 40.0%
!! TTAACGGACTAAGGCTAATG+TGG + chr3.1:69783145-69783164 None:intergenic 40.0%
!!! ACCCCATTTTTTCTCAACTC+CGG + chr3.1:69781249-69781268 None:intergenic 40.0%
!!! ATTTTTTGACACCCCAAGGA+CGG + chr3.1:69782709-69782728 None:intergenic 40.0%
!!! CATTTTTTCTCAACTCCGGT+AGG + chr3.1:69781245-69781264 None:intergenic 40.0%
!!! CTTTTTTATGGCTATAGCCG+GGG + chr3.1:69781067-69781086 None:intergenic 40.0%
!!! TCATCGCTGCTCAGTTTTTT+AGG + chr3.1:69785518-69785537 None:intergenic 40.0%
AAACTCACTGCCAAGAGAAG+TGG - chr3.1:69781418-69781437 MS.gene045133:CDS 45.0%
ACATCGTGTCCTAGATGCAA+AGG + chr3.1:69781596-69781615 None:intergenic 45.0%
ACCACCACATGTGTTACATC+TGG + chr3.1:69784994-69785013 None:intergenic 45.0%
ACTTTATGCTGCAGAGATCC+TGG - chr3.1:69784441-69784460 MS.gene045133:intron 45.0%
AGAACAACAAAGAGGTCACC+AGG + chr3.1:69785248-69785267 None:intergenic 45.0%
AGTGGGAACAGAGCAAAAGA+CGG + chr3.1:69784169-69784188 None:intergenic 45.0%
ATAAACAGCCGTTTAGGGGT+TGG + chr3.1:69783657-69783676 None:intergenic 45.0%
ATAAGTCTCAAGGTTCCAGC+CGG - chr3.1:69785158-69785177 MS.gene045133:intron 45.0%
ATGACAAATTTGGGGAGGCA+GGG - chr3.1:69784619-69784638 MS.gene045133:intron 45.0%
ATGCCAAAAAAGGACATGGG+GGG - chr3.1:69783685-69783704 MS.gene045133:intron 45.0%
ATGGTTCAGGAGCTAAACCA+GGG - chr3.1:69784958-69784977 MS.gene045133:intron 45.0%
ATGTAACACATGTGGTGGTC+AGG - chr3.1:69784995-69785014 MS.gene045133:intron 45.0%
ATTAGGCGACTAGAGAAGTG+TGG - chr3.1:69784927-69784946 MS.gene045133:intron 45.0%
CAAACTTTGCATCGTCGAAG+GGG - chr3.1:69782487-69782506 MS.gene045133:intron 45.0%
CAAGGAATCCCGAGCAAAAA+AGG + chr3.1:69782446-69782465 None:intergenic 45.0%
CAAGTGGCAGACTTCATTGA+TGG + chr3.1:69783599-69783618 None:intergenic 45.0%
CACTCAAACAAGGACTCCAT+TGG - chr3.1:69785028-69785047 MS.gene045133:intron 45.0%
CAGCTACTATAGCCGACAAT+TGG + chr3.1:69781118-69781137 None:intergenic 45.0%
CATCTGGATGATTTAGTCCC+TGG + chr3.1:69784978-69784997 None:intergenic 45.0%
CGTTTAAGGGTCCGAAATGA+AGG - chr3.1:69785197-69785216 MS.gene045133:intron 45.0%
CTTAAAGGTTCACCGGGATT+TGG - chr3.1:69784642-69784661 MS.gene045133:intron 45.0%
GACTGCTGAAAGATACCCAA+TGG + chr3.1:69785047-69785066 None:intergenic 45.0%
GGAAATCAGTAATGCGTACG+AGG - chr3.1:69784482-69784501 MS.gene045133:intron 45.0%
GGATTCTGGTAGCCGTTTAA+GGG - chr3.1:69785184-69785203 MS.gene045133:intron 45.0%
GGCTATAGTAGCTGTACTTC+TGG - chr3.1:69781124-69781143 MS.gene045133:CDS 45.0%
GGTGTCTTCTCGTTTAAGCA+CGG + chr3.1:69785288-69785307 None:intergenic 45.0%
GTCCGAAATGAAGGTAACTC+TGG - chr3.1:69785206-69785225 MS.gene045133:intron 45.0%
GTGTCTTCTCGTTTAAGCAC+GGG + chr3.1:69785287-69785306 None:intergenic 45.0%
GTGTTGAGTAGTGCTCCTTT+AGG + chr3.1:69781926-69781945 None:intergenic 45.0%
GTTAAACCCTGAACTCCTAC+CGG - chr3.1:69781227-69781246 MS.gene045133:CDS 45.0%
GTTGAGAACGGCAATGAGTT+TGG - chr3.1:69781317-69781336 MS.gene045133:CDS 45.0%
TAAACAGCCGTTTAGGGGTT+GGG + chr3.1:69783656-69783675 None:intergenic 45.0%
TATGACAAATTTGGGGAGGC+AGG - chr3.1:69784618-69784637 MS.gene045133:intron 45.0%
TCCACCATTCCATCTACAGT+CGG + chr3.1:69785374-69785393 None:intergenic 45.0%
TCCAGATGTAACACATGTGG+TGG - chr3.1:69784990-69785009 MS.gene045133:intron 45.0%
TCTAATATGTACCCGCATGC+AGG - chr3.1:69782674-69782693 MS.gene045133:intron 45.0%
TCTTGCTCACCTTTGCATCT+AGG - chr3.1:69781584-69781603 MS.gene045133:CDS 45.0%
TGCAAACTTGGCTATTGTGG+TGG + chr3.1:69780954-69780973 None:intergenic 45.0%
TGCGTACGAGGTAAAACTAG+AGG - chr3.1:69784494-69784513 MS.gene045133:intron 45.0%
TGCTATGGACAAAATGGTCC+GGG - chr3.1:69784217-69784236 MS.gene045133:intron 45.0%
TGGATTCTGGTAGCCGTTTA+AGG - chr3.1:69785183-69785202 MS.gene045133:intron 45.0%
TGTAACACATGTGGTGGTCA+GGG - chr3.1:69784996-69785015 MS.gene045133:intron 45.0%
TTTCTTGCAGTGCTACAAGC+AGG - chr3.1:69782392-69782411 MS.gene045133:CDS 45.0%
! CAAGGGCTTATTGCCTGTTT+TGG - chr3.1:69781205-69781224 MS.gene045133:CDS 45.0%
! GGTAACTCTGGAAAGAAAGG+TGG - chr3.1:69785218-69785237 MS.gene045133:intron 45.0%
! TGGTTATGCATTTTCCCCCA+TGG - chr3.1:69784007-69784026 MS.gene045133:CDS 45.0%
!! AGCTGTTTTCGGAGTGGAAA+AGG - chr3.1:69784896-69784915 MS.gene045133:intron 45.0%
!! ATGACTTGCTCGTCTTGCAA+TGG - chr3.1:69785068-69785087 MS.gene045133:intron 45.0%
!! GATAATTTCGGGCTAGCTTC+CGG + chr3.1:69784078-69784097 None:intergenic 45.0%
!! GCCATAACAAGTGTTGATCC+TGG + chr3.1:69785422-69785441 None:intergenic 45.0%
!! TGACTTGCTCGTCTTGCAAT+GGG - chr3.1:69785069-69785088 MS.gene045133:intron 45.0%
!! TTGTAAAAAAAAATATAAAA+AGG + chr3.1:69782583-69782602 None:intergenic 5.0%
!!! TTTTATATTTTTTTTTACAA+GGG - chr3.1:69782583-69782602 MS.gene045133:intron 5.0%
!!! TTTTTATATTTTTTTTTACA+AGG - chr3.1:69782582-69782601 MS.gene045133:intron 5.0%
AAACAGCCGTTTAGGGGTTG+GGG + chr3.1:69783655-69783674 None:intergenic 50.0%
AAAGGTTCACCGGGATTTGG+TGG - chr3.1:69784645-69784664 MS.gene045133:intron 50.0%
AACAGGCAATAAGCCCTTGC+CGG + chr3.1:69781204-69781223 None:intergenic 50.0%
ACCCCTTGCAGTACATGTTC+TGG - chr3.1:69785107-69785126 MS.gene045133:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr3.1:69783240-69783259 MS.gene045133:intron 50.0%
AGGACTACTACACCGTCCTT+GGG - chr3.1:69782694-69782713 MS.gene045133:intron 50.0%
ATCCTGGTTGTGTCCCAGAT+GGG + chr3.1:69785406-69785425 None:intergenic 50.0%
ATCCTTGTACGTGGTCCTCT+TGG - chr3.1:69783815-69783834 MS.gene045133:intron 50.0%
ATGGTCGCAGCAGACAATCT+TGG - chr3.1:69784817-69784836 MS.gene045133:intron 50.0%
CCCAGAACATGTACTGCAAG+GGG + chr3.1:69785111-69785130 None:intergenic 50.0%
CCCCAGAACATGTACTGCAA+GGG + chr3.1:69785112-69785131 None:intergenic 50.0%
CCCCTTGCAGTACATGTTCT+GGG - chr3.1:69785108-69785127 MS.gene045133:intron 50.0%
CCCTTGCAGTACATGTTCTG+GGG - chr3.1:69785109-69785128 MS.gene045133:intron 50.0%
CGCAGCAGACAATCTTGGAA+TGG - chr3.1:69784822-69784841 MS.gene045133:intron 50.0%
GAACTCTCGGAGTTGAGCAA+AGG - chr3.1:69785554-69785573 MS.gene045133:CDS 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - chr3.1:69783239-69783258 MS.gene045133:intron 50.0%
GATGGTTCAGGAGCTAAACC+AGG - chr3.1:69784957-69784976 MS.gene045133:intron 50.0%
GGAAAGAAAGGTGGTTCTCC+TGG - chr3.1:69785227-69785246 MS.gene045133:intron 50.0%
GGAGGGTCTTACAAAGTCAC+TGG - chr3.1:69781992-69782011 MS.gene045133:CDS 50.0%
GGGAATTCGTCCTCAGATTG+TGG - chr3.1:69780922-69780941 MS.gene045133:CDS 50.0%
GGTTCCGACTGTAGATGGAA+TGG - chr3.1:69785367-69785386 MS.gene045133:intron 50.0%
TCAACTCCGGTAGGAGTTCA+GGG + chr3.1:69781236-69781255 None:intergenic 50.0%
TCCCCAGAACATGTACTGCA+AGG + chr3.1:69785113-69785132 None:intergenic 50.0%
TCCGACTGTAGATGGAATGG+TGG - chr3.1:69785370-69785389 MS.gene045133:intron 50.0%
TCTCGTTTAAGCACGGGATC+CGG + chr3.1:69785281-69785300 None:intergenic 50.0%
TCTTTGCATCTCCCGCATCT+AGG + chr3.1:69783426-69783445 None:intergenic 50.0%
TGAACTTCGGCAGTCTTGAG+AGG + chr3.1:69783848-69783867 None:intergenic 50.0%
TGAGTCGCTATTTGAGGGCA+TGG - chr3.1:69784794-69784813 MS.gene045133:intron 50.0%
TGTGGTACTTGCGATGGTTC+AGG - chr3.1:69784945-69784964 MS.gene045133:intron 50.0%
TTCCAAGAGGACCACGTACA+AGG + chr3.1:69783820-69783839 None:intergenic 50.0%
! AAGGTTCACCGGGATTTGGT+GGG - chr3.1:69784646-69784665 MS.gene045133:intron 50.0%
! GAGAAGTGTGGTACTTGCGA+TGG - chr3.1:69784939-69784958 MS.gene045133:intron 50.0%
! TCGCTATTTGAGGGCATGGA+TGG - chr3.1:69784798-69784817 MS.gene045133:intron 50.0%
!! CTTGGCTATTGTGGTGGATC+TGG + chr3.1:69780948-69780967 None:intergenic 50.0%
!! GACGGGTTGTCACTCAAACA+AGG - chr3.1:69785018-69785037 MS.gene045133:intron 50.0%
!! TGCAGTACATGTTCTGGGGA+TGG - chr3.1:69785113-69785132 MS.gene045133:intron 50.0%
!!! TAGCCCCCCATGTCCTTTTT+TGG + chr3.1:69783691-69783710 None:intergenic 50.0%
!!! TCCGCTTTGTTTTCCTCACC+CGG + chr3.1:69785139-69785158 None:intergenic 50.0%
AACAGCCGTTTAGGGGTTGG+GGG + chr3.1:69783654-69783673 None:intergenic 55.0%
ACACATGTGGTGGTCAGGGA+CGG - chr3.1:69785000-69785019 MS.gene045133:intron 55.0%
ACGGCTACCAGAATCCACAC+CGG + chr3.1:69785180-69785199 None:intergenic 55.0%
AGAGAGAGAGAGAGAGGGAG+AGG - chr3.1:69783274-69783293 MS.gene045133:intron 55.0%
CAAAGGTGAGCAAGAGAGCC+AGG + chr3.1:69781579-69781598 None:intergenic 55.0%
CAGGACTACTACACCGTCCT+TGG - chr3.1:69782693-69782712 MS.gene045133:intron 55.0%
CGGTGTAGTAGTCCTGCATG+CGG + chr3.1:69782689-69782708 None:intergenic 55.0%
CTCAACTCCGGTAGGAGTTC+AGG + chr3.1:69781237-69781256 None:intergenic 55.0%
CTCGTTTAAGCACGGGATCC+GGG + chr3.1:69785280-69785299 None:intergenic 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG - chr3.1:69783275-69783294 MS.gene045133:intron 55.0%
GATCCTGGTTGTGTCCCAGA+TGG + chr3.1:69785407-69785426 None:intergenic 55.0%
GCAGGGCTTAAAGGTTCACC+GGG - chr3.1:69784636-69784655 MS.gene045133:intron 55.0%
GCCGGGTGAGGAAAACAAAG+CGG - chr3.1:69785135-69785154 MS.gene045133:intron 55.0%
GGACTACTACACCGTCCTTG+GGG - chr3.1:69782695-69782714 MS.gene045133:intron 55.0%
GGCAGGGCTTAAAGGTTCAC+CGG - chr3.1:69784635-69784654 MS.gene045133:intron 55.0%
GGTGTAGTAGTCCTGCATGC+GGG + chr3.1:69782688-69782707 None:intergenic 55.0%
GTGGATCTGGCCACAATCTG+AGG + chr3.1:69780935-69780954 None:intergenic 55.0%
TGCATCGTCGAAGGGGATCA+AGG - chr3.1:69782494-69782513 MS.gene045133:intron 55.0%
TGCTCGTCTTGCAATGGGAC+TGG - chr3.1:69785074-69785093 MS.gene045133:intron 55.0%
TTTGGGGAGGCAGGGCTTAA+AGG - chr3.1:69784627-69784646 MS.gene045133:intron 55.0%
! ATCCCATCTGGGACACAACC+AGG - chr3.1:69785401-69785420 MS.gene045133:intron 55.0%
!! AGGTTCACCGGGATTTGGTG+GGG - chr3.1:69784647-69784666 MS.gene045133:intron 55.0%
!! GTACATGTTCTGGGGATGGC+CGG - chr3.1:69785117-69785136 MS.gene045133:intron 55.0%
!! TACATGTTCTGGGGATGGCC+GGG - chr3.1:69785118-69785137 MS.gene045133:intron 55.0%
ACCCTCCCCCAACCCCTAAA+CGG - chr3.1:69783646-69783665 MS.gene045133:intron 60.0%
AGAGAGAGAGGGAGAGGGAG+AGG - chr3.1:69783280-69783299 MS.gene045133:intron 60.0%
AGCAAAGGCAAGACTGCCGC+CGG - chr3.1:69785569-69785588 MS.gene045133:CDS 60.0%
CACATGTGGTGGTCAGGGAC+GGG - chr3.1:69785001-69785020 MS.gene045133:intron 60.0%
CTACCAGAATCCACACCGGC+TGG + chr3.1:69785176-69785195 None:intergenic 60.0%
GAGAGAGAGGGAGAGGGAGA+GGG - chr3.1:69783281-69783300 MS.gene045133:intron 60.0%
GTTCCAGCCGGTGTGGATTC+TGG - chr3.1:69785170-69785189 MS.gene045133:intron 60.0%
TCTCAAGGTTCCAGCCGGTG+TGG - chr3.1:69785163-69785182 MS.gene045133:intron 60.0%
!! GGTTCACCGGGATTTGGTGG+GGG - chr3.1:69784648-69784667 MS.gene045133:intron 60.0%
AGAGGGAGAGGGAGAGGGAG+AGG - chr3.1:69783286-69783305 MS.gene045133:intron 65.0%
AGCCGTTTAGGGGTTGGGGG+AGG + chr3.1:69783651-69783670 None:intergenic 65.0%
CCCATGCCCCCACCAAATCC+CGG + chr3.1:69784657-69784676 None:intergenic 65.0%
GAGGGAGAGGGAGAGGGAGA+GGG - chr3.1:69783287-69783306 MS.gene045133:intron 65.0%
GCCGTTTAGGGGTTGGGGGA+GGG + chr3.1:69783650-69783669 None:intergenic 65.0%
!! ACCGGGATTTGGTGGGGGCA+TGG - chr3.1:69784653-69784672 MS.gene045133:intron 65.0%
!! CCGGGATTTGGTGGGGGCAT+GGG - chr3.1:69784654-69784673 MS.gene045133:intron 65.0%
!! CGGGATTTGGTGGGGGCATG+GGG - chr3.1:69784655-69784674 MS.gene045133:intron 65.0%
!! GGGATTTGGTGGGGGCATGG+GGG - chr3.1:69784656-69784675 MS.gene045133:intron 65.0%
!! GTTCTGGGGATGGCCGGGTG+AGG - chr3.1:69785123-69785142 MS.gene045133:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 69780881 69785601 69780881 ID=MS.gene045133
chr3.1 mRNA 69780881 69785601 69780881 ID=MS.gene045133.t1;Parent=MS.gene045133
chr3.1 exon 69785495 69785601 69785495 ID=MS.gene045133.t1.exon1;Parent=MS.gene045133.t1
chr3.1 CDS 69785495 69785601 69785495 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
chr3.1 exon 69783945 69784080 69783945 ID=MS.gene045133.t1.exon2;Parent=MS.gene045133.t1
chr3.1 CDS 69783945 69784080 69783945 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
chr3.1 exon 69783729 69783786 69783729 ID=MS.gene045133.t1.exon3;Parent=MS.gene045133.t1
chr3.1 CDS 69783729 69783786 69783729 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
chr3.1 exon 69782369 69782411 69782369 ID=MS.gene045133.t1.exon4;Parent=MS.gene045133.t1
chr3.1 CDS 69782369 69782411 69782369 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
chr3.1 exon 69781979 69782027 69781979 ID=MS.gene045133.t1.exon5;Parent=MS.gene045133.t1
chr3.1 CDS 69781979 69782027 69781979 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
chr3.1 exon 69781805 69781894 69781805 ID=MS.gene045133.t1.exon6;Parent=MS.gene045133.t1
chr3.1 CDS 69781805 69781894 69781805 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
chr3.1 exon 69780881 69781714 69780881 ID=MS.gene045133.t1.exon7;Parent=MS.gene045133.t1
chr3.1 CDS 69780881 69781714 69780881 ID=cds.MS.gene045133.t1;Parent=MS.gene045133.t1
Gene Sequence

>MS.gene045133

ATGGCAGTTACACCTTTTGGTAGTACATCAGCTACTCAATGGGGAATTCGTCCTCAGATTGTGGCCAGATCCACCACAATAGCCAAGTTTGCATCATCAAGACACAAGTCAGTCTTATGTTTTATTCTTAATTTTCATTCTCTTGTATATTACTTTGAAGGTTGATTTATCTGTCATATTGTGCCCCGGCTATAGCCATAAAAAAGTTTGGTATAAGAATGCGATTTTGTTACTCCAATTGTCGGCTATAGTAGCTGTACTTCTGGATATAGATTCAGATTATCAGAAACTAAGATGTGTTTCTCATTGAAAAGAAATATCCGGCAAGGGCTTATTGCCTGTTTTGGTTAAACCCTGAACTCCTACCGGAGTTGAGAAAAAATGGGGTTTAGTCATTTGAATTTTGTTAAGTTGATTGTAGTGAGTTGAAGTGCATGTTGAGAACGGCAATGAGTTTGGCAGAATCACGGTCTGTCATTGTAATTTTGCCCAACCTTTGGAACTTCAATAAAATCACGGTGTTGTTGTGATTTCATCAAACTCACTGCCAAGAGAAGTGGAATTTTTCAGTTTTTTGCACCAAGTAGAATTGATTCTTGTGTCAGACCCCGCTTAATTATTCACATTTACTCTGCAAAAGTGACTATACTTTATTTTCCAAACCAAATCGTCTCTTCTAAAATCTGTATCAATCGCCTGGCTCTCTTGCTCACCTTTGCATCTAGGACACGATGTCTTCATTTTAAGATGATTCCATTAGTCAATTGTCTGGTTTTTTCTCAATCAATTCTTTAGGGTCTTATGATATCACTTTGAAACAAATCAATTATTTCATCCATGAAATCGCACAAATTGGTAGCACTATTTAGGAAGTCAACAATTTGTGCCATTTGATGAATATGAAATATAATCATGCAACTTTTATCACTGATATGAGTTGCACGATTCAACAATTTATGTTTTTATCTTGCTTTTATGTCGCCAATTCTCATCAATGAATTTGAAGAATCAAATAGGTGCGCCATTGTTAAATGTAAAAAATCCTAAAGGAGCACTACTCAACACAACCTATTTAATAATCAATGCCTCTATTTTCATTCTTCTAAAATACGGAGGGTCTTACAAAGTCACTGGATCAATTGCTTTCTCACAATTTTCGCATACTTTTTCTCTGTTTTTTTTTTTAACTTAGGACATAGAACATTTGTGTTTGTTACATTGTGATTAAATTGCGTTGTGGGTTCCTCATTTTAAATCACTGCATTAAACACTATACATCATTATATGATATATTTGAAGTTATTTTGCATTGAACTTCTGAATCTTACGATTTGATACGATTTACAACTCACTATTCAGATGTTAGGTTTGCGATTCACAATTTATAACTTTGACATCTATTTGTTCAAAAATCAATTTTGAAAAAATTAAAACCAACAGATCCTTACTCATTAGGAACAGTTTTGCAGCATAATTCATTGTGTCGTAGAGTGTAATTCAATCCAATCATTTTTCTTGCAGTGCTACAAGCAGGATAAGCTTTATGGCTGCCCCAAGTTCAACCTTTTTTGCTCGGGATTCCTTGCGTTTTAATATAGGTTCACATCAAACTTTGCATCGTCGAAGGGGATCAAGGTTGATAGTTAGAGCAGATGCAGTAAGTTTTTATTACTTATGCTTTTCTAAGAAACGATGATTTCCTTTTTATATTTTTTTTTACAAGGGTTCCTTGTGAAAGTATTCTTCTTGAAGTTGGTTATATAACTATGACCATCCAATATATTGGCTGAATATCTAATATGTACCCGCATGCAGGACTACTACACCGTCCTTGGGGTGTCAAAAAATTCTACTAAATCTGAAATTAAGACTGGTATGTTTCTGCAGTCCCTTCTCTGACTGTTATGATTTGCCTCCATCATCATTAGTTGATGCGTTCAAATTCAGTGCTTTTATTTACTTATTAGTTGTTGAATTCACGAATGATAATCTCCTTTTATATTATATATCTCTTGCTGTTTCTTTAACATTGACTAATTGAAATACTATTACTAATAAAATGTTTGTGAAGGATGCAAGAGAAGTACTGATAATGAACCTAACAGCTAACTCTGTCAAGAAGTCTGCCAAAACATAGAACAAGAATTAAAGTAACAATATCAAAACTAAATACATTGTTTTTATTTACTCATTAGTTGTTGAATTCTTGAATGACCATTTGTTATCAAAGCTGTGATCTCTGTATTAACAGAAATTAGTGACCACATTAGCCTTAGTCCGTTAACTACGAATGATTAGGATCAGGGTTCTCTACATTTGAGTTTCCTAAATTCTTCTGTATTTAGGTAAACATCTTTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGAGAGAGTGTTGCATATGTATGTTTCCTTGTTGTATGTTGTAAAGCAAAAGCATTGTAATCTTTTGCCTAGATGCGGGAGATGCAAAGATTTGTAACTGCAGGGAATCCAAATCCGAATGATTATCTCATTTAATATAACTCTTGCTACTTCTTTAATCTTAATACCAATACTGAAGAAGGTTCAGATAAAATGTCTGTGAAGGATGTAAGATGAGTAAATCAAATTTAACAGTTAAAACCATCAATGAAGTCTGCCACTTGATAATGCTTGTTGCTAATAATCATGAGACCCTCCCCCAACCCCTAAACGGCTGTTTATTTTGTTTAATGCCAAAAAAGGACATGGGGGGCTAGCTTTCCAAACCAAATTTGAAACTTTCAAAATTAATCGTCTTGATTGCTCTTTGGTATTGTATTGCGAGGCTTTCTGTATAGACCAACATAAACCAAAACTCGAATCCTTGTACGTGGTCCTCTTGGAAAACTTCCTCTCAAGACTGCCGAAGTTCAAACTAAACATTTATTTCATTTAACTTTTTTTTTTGGTAATCAATGCAGGAAAGGTTTGGAGAAGTTTAAAATTAGTATCAGAAACATCAATTACTCGGGTTAAGCTATTATTATAGCTAGATGCTATGTGTGATTTACTTGGTTATGCATTTTCCCCCATGGTATCATTGCATTGTTAACTCTTTCTATTGTAAATGTTTCAGCTTACCGGAAGCTAGCCCGAAATTATCATCCAGATGTGAACAAGTGAGTATTTTTTTTTCCTCACTTCCCATTGAAGTTATCTGCTTTCTAATATCCGTCTTTTGCTCTGTTCCCACTCTTTTTTTCCTTTTCTAGATTTCACTATTGCTATGGACAAAATGGTCCGGGTGTCTTAGATTATACCAATGCTTGCAGCATGTCATTTTTAAATCAATTTTTTTGTACATTCCTGAATTGCCTGTTATATGAAGTCGTTTAGCTAAGTGCATTTTCACCTGTCATGCCATAATTTCTAGTTGCATAATTTTTTTTCACATGGTCATAATCATTTATTAACGTTGCTTATCGTTGACCTATATATGTGTATTCACTTTATGCTGCAGAGATCCTGGTGCAGAAGAGAAATTTAAGGAAATCAGTAATGCGTACGAGGTAAAACTAGAGGATAATAAACACAACTGACCCTAATTCATGGTTAGTTCATAACTGATCTTATGTAACTATAATCCTTTTCAGGTCTTGTCAGATGATGAGAAACGGTCCATATATGACAAATTTGGGGAGGCAGGGCTTAAAGGTTCACCGGGATTTGGTGGGGGCATGGGGGTAAGTTACCAAGTTACCTCCAAAGATTATGGAGAATTTTAACTTGTCATAACATTGTTTTTGATAAATGTAAAATCTTTGTGATTATAGGATTTCAGCAACCCTTTTGATCTGTTTGAGTCGCTATTTGAGGGCATGGATGGTCGCAGCAGACAATCTTGGAATGGAGCAATGAATGGCGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCTGTTTTCGGAGTGGAAAAGGAGATAGAGATTAGGCGACTAGAGAAGTGTGGTACTTGCGATGGTTCAGGAGCTAAACCAGGGACTAAATCATCCAGATGTAACACATGTGGTGGTCAGGGACGGGTTGTCACTCAAACAAGGACTCCATTGGGTATCTTTCAGCAGTCTATGACTTGCTCGTCTTGCAATGGGACTGGAGAAACTCGAACCCCTTGCAGTACATGTTCTGGGGATGGCCGGGTGAGGAAAACAAAGCGGATAAGTCTCAAGGTTCCAGCCGGTGTGGATTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGTAACTCTGGAAAGAAAGGTGGTTCTCCTGGTGACCTCTTTGTTGTTCTTGAAGTTATCCCGGATCCCGTGCTTAAACGAGAAGACACCAACATTTTATATTCTTGTAAAGTGTCTTATATTGATGCAATCTTGGGGACTACAATTAAGGTTCCGACTGTAGATGGAATGGTGGATTTGAAAATCCCATCTGGGACACAACCAGGATCAACACTTGTTATGGCAAAGAAAGGTGTTCCTCTGCTGAATAAGAAGAATATGAGGGGCGATCAATTCGTTCGAGTGCAAGTTGAGATTCCTAAAAAACTGAGCAGCGATGAGAGAAAACTGATTGAGGAACTCTCGGAGTTGAGCAAAGGCAAGACTGCCGCCGGTATGAGATGA
Protein sequence

>MS.gene045133.t1

MAVTPFGSTSATQWGIRPQIVARSTTIAKFASSRHNATSRISFMAAPSSTFFARDSLRFNIGSHQTLHRRRGSRLIVRADADYYTVLGVSKNSTKSEIKTAYRKLARNYHPDVNKDPGAEEKFKEISNAYEVLSDDEKRSIYDKFGEAGLKGSPGFGGGMGDFSNPFDLFESLFEGMDGRSRQSWNGAMNGEDEYYSLVLNFKEAVFGVEKEIEIRRLEKCGTCDGSGAKPGTKSSRCNTCGGQGRVVTQTRTPLGIFQQSMTCSSCNGTGETRTPCSTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRNEGNSGKKGGSPGDLFVVLEVIPDPVLKREDTNILYSCKVSYIDAILGTTIKVPTVDGMVDLKIPSGTQPGSTLVMAKKGVPLLNKKNMRGDQFVRVQVEIPKKLSSDERKLIEELSELSKGKTAAGMR