AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038497

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038497.t1 MTR_3g077720 86.585 164 22 0 1 164 1 164 2.30e-104 296
MS.gene038497.t1 MTR_3g077730 81.679 131 22 1 32 160 5 135 5.03e-72 214
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038497.t1 AT4G22220 70.588 153 43 2 5 156 7 158 2.35e-73 218
MS.gene038497.t1 AT4G04080 63.924 158 55 2 1 157 1 157 4.97e-71 212
MS.gene038497.t1 AT3G01020 62.195 164 59 1 1 164 3 163 2.18e-67 202

Find 48 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTAAGGTTGATGATAA+TGG 0.228001 8.4:+36529344 MS.gene038497:CDS
TGTCATGAAGTTTCAAATTA+AGG 0.237273 8.4:+36529331 MS.gene038497:CDS
AGTCGCCAATTCCAGCAATT+AGG 0.263293 8.4:+36529183 MS.gene038497:CDS
GATTCTTGCTTTAAGACCTT+TGG 0.331092 8.4:+36529377 MS.gene038497:CDS
GTCGCCAATTCCAGCAATTA+GGG 0.344413 8.4:+36529184 MS.gene038497:CDS
ATGCTGCAGTGAAGCTTAAC+TGG 0.354352 8.4:-36531071 None:intergenic
GCGACTCAAACGACGCCGTT+TGG 0.381388 8.4:-36529166 None:intergenic
AGAACCCTAATTGCTGGAAT+TGG 0.383969 8.4:-36529188 None:intergenic
TATTGAAGGATCCAACATTC+CGG 0.387150 8.4:-36529256 None:intergenic
CGTGGAAGAACCCTAATTGC+TGG 0.397022 8.4:-36529194 None:intergenic
ATCCCGCTCTTCCTTATTGA+AGG 0.405732 8.4:-36529270 None:intergenic
GCAGCTACTGAATGGGTAAA+GGG 0.419402 8.4:+36529575 MS.gene038497:intron
GATGTGGGATCTGCTCTTGT+TGG 0.435958 8.4:+36529290 MS.gene038497:CDS
ATTGAAGGATCCAACATTCC+GGG 0.441741 8.4:-36529255 None:intergenic
TGCCTCGGCTACTGCGGCCA+CGG 0.446467 8.4:+36531145 MS.gene038497:CDS
CGCAAAGAAACTCGTCCAAA+CGG 0.447336 8.4:+36529151 MS.gene038497:CDS
GAATGTTGGATCCTTCAATA+AGG 0.455792 8.4:+36529259 MS.gene038497:CDS
TGCTTTAAGACCTTTGGATG+TGG 0.461939 8.4:+36529383 MS.gene038497:CDS
TGCAGCTACTGAATGGGTAA+AGG 0.478916 8.4:+36529574 MS.gene038497:intron
TACGAAAATCCCCGGAATGT+TGG 0.502070 8.4:+36529245 MS.gene038497:CDS
GCCTCGGCTACTGCGGCCAC+GGG 0.517239 8.4:+36531146 MS.gene038497:CDS
ATCCTTCAATAAGGAAGAGC+GGG 0.537337 8.4:+36529268 MS.gene038497:CDS
ATTCTACCACGAGACGGTGG+TGG 0.539129 8.4:+36529217 MS.gene038497:CDS
TGCAGTGAAGCTTAACTGGC+GGG 0.542392 8.4:-36531067 None:intergenic
CAATAAGGAAGAGCGGGATG+TGG 0.543876 8.4:+36529274 MS.gene038497:CDS
TCCCGTGGCCGCAGTAGCCG+AGG 0.550070 8.4:-36531147 None:intergenic
AATAAGGAAGAGCGGGATGT+GGG 0.572091 8.4:+36529275 MS.gene038497:CDS
GCTATTGCTTCATCGTCCGT+TGG 0.572466 8.4:+36529410 MS.gene038497:CDS
TTATAAAGCTAAGCGTGCCT+CGG 0.575006 8.4:+36531130 MS.gene038497:CDS
CTTGTTGGTGCACCCGCTTG+TGG 0.585089 8.4:+36529305 MS.gene038497:CDS
CTTCATGACATCACCACAAG+CGG 0.586806 8.4:-36529318 None:intergenic
TAAGCGTGCCTCGGCTACTG+CGG 0.598393 8.4:+36531139 MS.gene038497:CDS
AGTGATCCACCACCGTCTCG+TGG 0.599249 8.4:-36529223 None:intergenic
TTCATGACATCACCACAAGC+GGG 0.599308 8.4:-36529317 None:intergenic
GGTAAAGGGAAAGCAAATTG+AGG 0.606606 8.4:+36529589 MS.gene038497:CDS
TCACTGCAGCATGCTTGCTG+AGG 0.608636 8.4:+36531082 MS.gene038497:CDS
TGGATCACTACGAAAATCCC+CGG 0.610214 8.4:+36529237 MS.gene038497:CDS
AGTGGCAGATTTGTCTCCCG+TGG 0.628353 8.4:-36531162 None:intergenic
CTGCAGTGAAGCTTAACTGG+CGG 0.631259 8.4:-36531068 None:intergenic
TTGAAGGATCCAACATTCCG+GGG 0.632300 8.4:-36529254 None:intergenic
ACCGTCTCGTGGTAGAATCG+TGG 0.633041 8.4:-36529212 None:intergenic
AATAGCGGAACCACATCCAA+AGG 0.639771 8.4:-36529393 None:intergenic
TCCACGATTCTACCACGAGA+CGG 0.664442 8.4:+36529211 MS.gene038497:CDS
CAATGGGAGAAATCATGCAG+TGG 0.672265 8.4:-36531180 None:intergenic
GATCCTTCAATAAGGAAGAG+CGG 0.672957 8.4:+36529267 MS.gene038497:CDS
AACGGACGATGAAGCAATAG+CGG 0.675366 8.4:-36529408 None:intergenic
TGAGGATGCTATAAAAGCAG+CGG 0.695297 8.4:+36531100 MS.gene038497:CDS
ACGATTCTACCACGAGACGG+TGG 0.736423 8.4:+36529214 MS.gene038497:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAACTTGATAT+AGG - chr8.4:36529869-36529888 None:intergenic 10.0%
!! ATAATCAAATTCAATAAAAA+AGG - chr8.4:36529515-36529534 None:intergenic 10.0%
!! TAATCAAATTCAATAAAAAA+GGG - chr8.4:36529514-36529533 None:intergenic 10.0%
!!! AATTAAGGATTTTTTTTTTT+AGG + chr8.4:36529468-36529487 MS.gene038497:intron 10.0%
!!! ATTAAGGATTTTTTTTTTTA+GGG + chr8.4:36529469-36529488 MS.gene038497:intron 10.0%
!! TTATATTTATTCTTCATGAT+CGG + chr8.4:36530685-36530704 MS.gene038497:intron 15.0%
!!! AATAGATACATAATTTTTAG+TGG + chr8.4:36530793-36530812 MS.gene038497:intron 15.0%
!!! AGTGTAACTTATTTTATTTT+AGG - chr8.4:36530467-36530486 None:intergenic 15.0%
!!! ATAAATTTTTTGTTGAAGAT+GGG + chr8.4:36529961-36529980 MS.gene038497:intron 15.0%
!!! TATAAATTTTTTGTTGAAGA+TGG + chr8.4:36529960-36529979 MS.gene038497:intron 15.0%
!!! TCCCAAATTTTAATAAATTT+GGG - chr8.4:36530774-36530793 None:intergenic 15.0%
!!! TTCCCAAATTTTAATAAATT+TGG - chr8.4:36530775-36530794 None:intergenic 15.0%
!!! TTGGTTTTAATTTTATGTTT+GGG + chr8.4:36530028-36530047 MS.gene038497:intron 15.0%
!! ATGTAGAAAGCAAATATATT+TGG + chr8.4:36530005-36530024 MS.gene038497:intron 20.0%
!! GCCCAAATTTATTAAAATTT+GGG + chr8.4:36530770-36530789 MS.gene038497:intron 20.0%
!! TGAAGTTAAAATTGTAATGT+TGG - chr8.4:36530224-36530243 None:intergenic 20.0%
!! TGCCCAAATTTATTAAAATT+TGG + chr8.4:36530769-36530788 MS.gene038497:intron 20.0%
!!! AAATTTTAATAAATTTGGGC+AGG - chr8.4:36530770-36530789 None:intergenic 20.0%
!!! AACTTATTTTATTTTAGGAC+AGG - chr8.4:36530462-36530481 None:intergenic 20.0%
!!! ACTTATTTTATTTTAGGACA+GGG - chr8.4:36530461-36530480 None:intergenic 20.0%
!!! ATTTTTATCTTTCTTCAGTT+CGG + chr8.4:36529886-36529905 MS.gene038497:intron 20.0%
!!! CTACTAAATAGTTTTATCTT+TGG + chr8.4:36530941-36530960 MS.gene038497:intron 20.0%
!!! CTTTTATGAATATTACTACT+TGG + chr8.4:36530543-36530562 MS.gene038497:intron 20.0%
!!! GTTACATTTTAATCAAACTT+TGG + chr8.4:36529913-36529932 MS.gene038497:intron 20.0%
!!! GTTGGTTTTAATTTTATGTT+TGG + chr8.4:36530027-36530046 MS.gene038497:intron 20.0%
!!! TGGTTTTAATTTTATGTTTG+GGG + chr8.4:36530029-36530048 MS.gene038497:intron 20.0%
!!! TTTTAATAAACCATTCTCTA+AGG + chr8.4:36530380-36530399 MS.gene038497:intron 20.0%
! AAATTGTAATGTTGGATGAT+AGG - chr8.4:36530216-36530235 None:intergenic 25.0%
! AACAAGAAAAAGAAACCAAA+AGG - chr8.4:36530864-36530883 None:intergenic 25.0%
! AGAAAGCAAATATATTTGGT+TGG + chr8.4:36530009-36530028 MS.gene038497:intron 25.0%
! TGTCATGAAGTTTCAAATTA+AGG + chr8.4:36529331-36529350 MS.gene038497:CDS 25.0%
! TTATCATTCTCTAATAGTTC+AGG + chr8.4:36530341-36530360 MS.gene038497:intron 25.0%
!! ATATTTTGCCATAATAAGCA+TGG + chr8.4:36529824-36529843 MS.gene038497:intron 25.0%
!! TATTTTTCGCTTGAGAATAT+TGG + chr8.4:36529772-36529791 MS.gene038497:intron 25.0%
!!! ACAGCTTATTTTTCTACTTA+TGG + chr8.4:36530080-36530099 MS.gene038497:intron 25.0%
!!! CAAATTAAGGTTGATGATAA+TGG + chr8.4:36529344-36529363 MS.gene038497:CDS 25.0%
!!! CTTATTTTATTTTAGGACAG+GGG - chr8.4:36530460-36530479 None:intergenic 25.0%
!!! TAGGTTGTTTTTTCATGTAT+TGG + chr8.4:36529433-36529452 MS.gene038497:intron 25.0%
!!! TGGTTTCTTTTTCTTGTTTT+TGG + chr8.4:36530866-36530885 MS.gene038497:intron 25.0%
!!! TGGTTTGTTATAGGAAATTA+AGG + chr8.4:36529453-36529472 MS.gene038497:intron 25.0%
!!! TTATTTTATTTTAGGACAGG+GGG - chr8.4:36530459-36530478 None:intergenic 25.0%
!!! TTCATGTATTGGTTTGTTAT+AGG + chr8.4:36529444-36529463 MS.gene038497:intron 25.0%
!!! TTCTTTTTCTTGTTTTTGGA+AGG + chr8.4:36530870-36530889 MS.gene038497:intron 25.0%
!!! TTTTAATCAAACTTTGGCTT+TGG + chr8.4:36529919-36529938 MS.gene038497:intron 25.0%
AACTGTTTCCATGCTTATTA+TGG - chr8.4:36529835-36529854 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr8.4:36530070-36530089 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr8.4:36530069-36530088 None:intergenic 30.0%
ATGAAAAAACAACCTACCAA+CGG - chr8.4:36529429-36529448 None:intergenic 30.0%
TAAGATTAAATCCTGCAGAT+CGG - chr8.4:36530921-36530940 None:intergenic 30.0%
TCATAAAAGTTAGTATTCGC+TGG - chr8.4:36530532-36530551 None:intergenic 30.0%
! TTTTCGTGCACTCTTTAATT+TGG - chr8.4:36530273-36530292 None:intergenic 30.0%
!! AAGCAAATTGTGTTTTTGTC+TGG + chr8.4:36529671-36529690 MS.gene038497:intron 30.0%
!!! TTTTTCTTGTTTTTGGAAGG+AGG + chr8.4:36530873-36530892 MS.gene038497:intron 30.0%
AACATAGCAGCAAAAGATGA+TGG - chr8.4:36530836-36530855 None:intergenic 35.0%
AATAGCTCGACCTATAGAAT+AGG + chr8.4:36530645-36530664 MS.gene038497:intron 35.0%
ATAGCTCGACCTATAGAATA+GGG + chr8.4:36530646-36530665 MS.gene038497:intron 35.0%
GAAGTTTGTGTATTACTACG+TGG + chr8.4:36529696-36529715 MS.gene038497:intron 35.0%
GAATGTTGGATCCTTCAATA+AGG + chr8.4:36529259-36529278 MS.gene038497:CDS 35.0%
TATTGAAGGATCCAACATTC+CGG - chr8.4:36529259-36529278 None:intergenic 35.0%
! CATCTTTTGCTGCTATGTTT+TGG + chr8.4:36530837-36530856 MS.gene038497:intron 35.0%
! GAGTGTTTTTCCTTAGAGAA+TGG - chr8.4:36530393-36530412 None:intergenic 35.0%
!! GATTCTTGCTTTAAGACCTT+TGG + chr8.4:36529377-36529396 MS.gene038497:CDS 35.0%
!! TTTGGTAATGCTTCCATGAT+TGG + chr8.4:36530959-36530978 MS.gene038497:intron 35.0%
!! TTTTGTTGAAGATGGGTTTC+TGG + chr8.4:36529968-36529987 MS.gene038497:intron 35.0%
AGAACCCTAATTGCTGGAAT+TGG - chr8.4:36529191-36529210 None:intergenic 40.0%
ATCCTTCAATAAGGAAGAGC+GGG + chr8.4:36529268-36529287 MS.gene038497:CDS 40.0%
ATTGAAGGATCCAACATTCC+GGG - chr8.4:36529258-36529277 None:intergenic 40.0%
CAGACCAAAACTACCAATCA+TGG - chr8.4:36530975-36530994 None:intergenic 40.0%
CCATCAAACAATGCTAGCAA+GGG + chr8.4:36530594-36530613 MS.gene038497:intron 40.0%
GATCCTTCAATAAGGAAGAG+CGG + chr8.4:36529267-36529286 MS.gene038497:CDS 40.0%
GGTAAAGGGAAAGCAAATTG+AGG + chr8.4:36529589-36529608 MS.gene038497:CDS 40.0%
TAGCTACTAGGAAGAGTTTC+CGG + chr8.4:36530617-36530636 MS.gene038497:intron 40.0%
TCCATCAAACAATGCTAGCA+AGG + chr8.4:36530593-36530612 MS.gene038497:intron 40.0%
TGAGGATGCTATAAAAGCAG+CGG + chr8.4:36531100-36531119 MS.gene038497:CDS 40.0%
TTATAAAGCTAAGCGTGCCT+CGG + chr8.4:36531130-36531149 MS.gene038497:CDS 40.0%
! ATCGTTTTGCAGCTACTGAA+TGG + chr8.4:36529567-36529586 MS.gene038497:intron 40.0%
! CTGGATTGCGTTATTTCAAC+TGG - chr8.4:36530513-36530532 None:intergenic 40.0%
! GTTATTTCAACTGGTCGCTA+TGG - chr8.4:36530504-36530523 None:intergenic 40.0%
! TAGGTCGAGCTATTTCATAC+CGG - chr8.4:36530639-36530658 None:intergenic 40.0%
! TCGTTTTGCAGCTACTGAAT+GGG + chr8.4:36529568-36529587 MS.gene038497:intron 40.0%
!! CTGCTATGTTTTGGACCTTT+TGG + chr8.4:36530846-36530865 MS.gene038497:intron 40.0%
!! GCTTCCATGATTGGTAGTTT+TGG + chr8.4:36530968-36530987 MS.gene038497:intron 40.0%
!! TGCTTTAAGACCTTTGGATG+TGG + chr8.4:36529383-36529402 MS.gene038497:CDS 40.0%
!!! AGCTTTGGATTCCTTTTCCT+TGG - chr8.4:36530714-36530733 None:intergenic 40.0%
!!! TTTATTTTAGGACAGGGGGT+GGG - chr8.4:36530455-36530474 None:intergenic 40.0%
!!! TTTTATTTTAGGACAGGGGG+TGG - chr8.4:36530456-36530475 None:intergenic 40.0%
AACGGACGATGAAGCAATAG+CGG - chr8.4:36529411-36529430 None:intergenic 45.0%
AATAAGGAAGAGCGGGATGT+GGG + chr8.4:36529275-36529294 MS.gene038497:CDS 45.0%
AGTCGCCAATTCCAGCAATT+AGG + chr8.4:36529183-36529202 MS.gene038497:CDS 45.0%
ATCCCGCTCTTCCTTATTGA+AGG - chr8.4:36529273-36529292 None:intergenic 45.0%
ATGATCGGCAACCAAGGAAA+AGG + chr8.4:36530700-36530719 MS.gene038497:intron 45.0%
ATGCTGCAGTGAAGCTTAAC+TGG - chr8.4:36531074-36531093 None:intergenic 45.0%
CACTCCTCTCCCTATTCTAT+AGG - chr8.4:36530658-36530677 None:intergenic 45.0%
CCCTTGCTAGCATTGTTTGA+TGG - chr8.4:36530597-36530616 None:intergenic 45.0%
CGCAAAGAAACTCGTCCAAA+CGG + chr8.4:36529151-36529170 MS.gene038497:CDS 45.0%
CTATAGAATAGGGAGAGGAG+TGG + chr8.4:36530656-36530675 MS.gene038497:intron 45.0%
CTTCATGACATCACCACAAG+CGG - chr8.4:36529321-36529340 None:intergenic 45.0%
GACGTGTAGCTAAGTAGCTT+TGG - chr8.4:36530729-36530748 None:intergenic 45.0%
GCAGCTACTGAATGGGTAAA+GGG + chr8.4:36529575-36529594 MS.gene038497:intron 45.0%
GCGCGATTCAGAAACCAAAA+GGG - chr8.4:36530899-36530918 None:intergenic 45.0%
GTCGCCAATTCCAGCAATTA+GGG + chr8.4:36529184-36529203 MS.gene038497:CDS 45.0%
TACGAAAATCCCCGGAATGT+TGG + chr8.4:36529245-36529264 MS.gene038497:CDS 45.0%
TCGACCTATAGAATAGGGAG+AGG + chr8.4:36530651-36530670 MS.gene038497:intron 45.0%
TGCAGCTACTGAATGGGTAA+AGG + chr8.4:36529574-36529593 MS.gene038497:intron 45.0%
TGGATCACTACGAAAATCCC+CGG + chr8.4:36529237-36529256 MS.gene038497:CDS 45.0%
TTCATGACATCACCACAAGC+GGG - chr8.4:36529320-36529339 None:intergenic 45.0%
TTCTTCATGATCGGCAACCA+AGG + chr8.4:36530694-36530713 MS.gene038497:intron 45.0%
TTGAAGGATCCAACATTCCG+GGG - chr8.4:36529257-36529276 None:intergenic 45.0%
! AATAGCGGAACCACATCCAA+AGG - chr8.4:36529396-36529415 None:intergenic 45.0%
!! AACTTTGGCTTTGGTGCTTG+AGG + chr8.4:36529928-36529947 MS.gene038497:intron 45.0%
!! TTTTTGGAAGGAGGCCCTTT+TGG + chr8.4:36530882-36530901 MS.gene038497:intron 45.0%
CAATAAGGAAGAGCGGGATG+TGG + chr8.4:36529274-36529293 MS.gene038497:CDS 50.0%
CGTGGAAGAACCCTAATTGC+TGG - chr8.4:36529197-36529216 None:intergenic 50.0%
CTGCAGTGAAGCTTAACTGG+CGG - chr8.4:36531071-36531090 None:intergenic 50.0%
GATGTGGGATCTGCTCTTGT+TGG + chr8.4:36529290-36529309 MS.gene038497:CDS 50.0%
GCTACTTAGCTACACGTCGA+AGG + chr8.4:36530731-36530750 MS.gene038497:intron 50.0%
GCTATTGCTTCATCGTCCGT+TGG + chr8.4:36529410-36529429 MS.gene038497:CDS 50.0%
GGCGCGATTCAGAAACCAAA+AGG - chr8.4:36530900-36530919 None:intergenic 50.0%
TCAACTGGTCGCTATGGTGA+TGG - chr8.4:36530498-36530517 None:intergenic 50.0%
TCCACGATTCTACCACGAGA+CGG + chr8.4:36529211-36529230 MS.gene038497:CDS 50.0%
TGCAGTGAAGCTTAACTGGC+GGG - chr8.4:36531070-36531089 None:intergenic 50.0%
TGCTAGCAAGGGTAGCTACT+AGG + chr8.4:36530605-36530624 MS.gene038497:intron 50.0%
TTGAAGATGCGAGCCCTGTT+TGG + chr8.4:36530053-36530072 MS.gene038497:intron 50.0%
TTGCTTCATCGTCCGTTGGT+AGG + chr8.4:36529414-36529433 MS.gene038497:intron 50.0%
!! GCTTTGGTGCTTGAGGTTGA+TGG + chr8.4:36529935-36529954 MS.gene038497:intron 50.0%
!! TGGTCGCTATGGTGATGGTT+AGG - chr8.4:36530493-36530512 None:intergenic 50.0%
ACCGTCTCGTGGTAGAATCG+TGG - chr8.4:36529215-36529234 None:intergenic 55.0%
ACGATTCTACCACGAGACGG+TGG + chr8.4:36529214-36529233 MS.gene038497:CDS 55.0%
AGTGGCAGATTTGTCTCCCG+TGG - chr8.4:36531165-36531184 None:intergenic 55.0%
ATTCTACCACGAGACGGTGG+TGG + chr8.4:36529217-36529236 MS.gene038497:CDS 55.0%
! TCACTGCAGCATGCTTGCTG+AGG + chr8.4:36531082-36531101 MS.gene038497:CDS 55.0%
!!! ATTTTAGGACAGGGGGTGGG+TGG - chr8.4:36530452-36530471 None:intergenic 55.0%
!!! TTTTAGGACAGGGGGTGGGT+GGG - chr8.4:36530451-36530470 None:intergenic 55.0%
AGTGATCCACCACCGTCTCG+TGG - chr8.4:36529226-36529245 None:intergenic 60.0%
CTTGTTGGTGCACCCGCTTG+TGG + chr8.4:36529305-36529324 MS.gene038497:CDS 60.0%
GCGACTCAAACGACGCCGTT+TGG - chr8.4:36529169-36529188 None:intergenic 60.0%
TAAGCGTGCCTCGGCTACTG+CGG + chr8.4:36531139-36531158 MS.gene038497:CDS 60.0%
! TCTGAATCGCGCCGATCTGC+AGG + chr8.4:36530907-36530926 MS.gene038497:intron 60.0%
ACAGGGGGTGGGTGGGTGAG+TGG - chr8.4:36530444-36530463 None:intergenic 70.0%
GGTGGGTGGGTGAGTGGTGG+TGG - chr8.4:36530438-36530457 None:intergenic 70.0%
TGCCTCGGCTACTGCGGCCA+CGG + chr8.4:36531145-36531164 MS.gene038497:CDS 70.0%
GCCTCGGCTACTGCGGCCAC+GGG + chr8.4:36531146-36531165 MS.gene038497:CDS 75.0%
GGGGGTGGGTGGGTGAGTGG+TGG - chr8.4:36530441-36530460 None:intergenic 75.0%
TCCCGTGGCCGCAGTAGCCG+AGG - chr8.4:36531150-36531169 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 36529140 36531190 36529140 ID=MS.gene038497
chr8.4 mRNA 36529140 36531190 36529140 ID=MS.gene038497.t1;Parent=MS.gene038497
chr8.4 exon 36529140 36529431 36529140 ID=MS.gene038497.t1.exon1;Parent=MS.gene038497.t1
chr8.4 CDS 36529140 36529431 36529140 ID=cds.MS.gene038497.t1;Parent=MS.gene038497.t1
chr8.4 exon 36529579 36529633 36529579 ID=MS.gene038497.t1.exon2;Parent=MS.gene038497.t1
chr8.4 CDS 36529579 36529633 36529579 ID=cds.MS.gene038497.t1;Parent=MS.gene038497.t1
chr8.4 exon 36531043 36531190 36531043 ID=MS.gene038497.t1.exon3;Parent=MS.gene038497.t1
chr8.4 CDS 36531043 36531190 36531043 ID=cds.MS.gene038497.t1;Parent=MS.gene038497.t1
Gene Sequence

>MS.gene038497

ATGCTGAGAATCGCAAAGAAACTCGTCCAAACGGCGTCGTTTGAGTCGCCAATTCCAGCAATTAGGGTTCTTCCACGATTCTACCACGAGACGGTGGTGGATCACTACGAAAATCCCCGGAATGTTGGATCCTTCAATAAGGAAGAGCGGGATGTGGGATCTGCTCTTGTTGGTGCACCCGCTTGTGGTGATGTCATGAAGTTTCAAATTAAGGTTGATGATAATGGAACAATCGTTGATTCTTGCTTTAAGACCTTTGGATGTGGTTCCGCTATTGCTTCATCGTCCGTTGGTAGGTTGTTTTTTCATGTATTGGTTTGTTATAGGAAATTAAGGATTTTTTTTTTTAGGGTTGTGTTTGAATTTCAATTCCCTTTTTTATTGAATTTGATTATTACGACTATGTTATTGTTAATTGTGCTTGTTTATCGTTTTGCAGCTACTGAATGGGTAAAGGGAAAGCAAATTGAGGAAGTTTTAAGCATTAAGAACACGTAAGTAACTCGTCTAAGAATTTTTTACTTTGTTGCAAAGCAAATTGTGTTTTTGTCTGGCTGAAGTTTGTGTATTACTACGTGGTTTATTTCTTAATTGTTGTGTATTTTTATGTGATTTATTTCTTAATTATATGATATTTTTCGCTTGAGAATATTGGATGATATTCATAAAAGTAACGAAATAATAATATTTTGCCATAATAAGCATGGAAACAGTTCTGAGCTATATCCTATATCAAGTTTTATTTTATTTTTATCTTTCTTCAGTTCGGTAATGTTACATTTTAATCAAACTTTGGCTTTGGTGCTTGAGGTTGATGGTATATAAATTTTTTGTTGAAGATGGGTTTCTGGCTATTCAAGTTTAGATGTAGAAAGCAAATATATTTGGTTGGTTTTAATTTTATGTTTGGGGTTTGAAGATGCGAGCCCTGTTTGGATAAACAGCTTATTTTTCTACTTATGGTATAAACGATTATCATATAAGCACTTAAGAGATATACTATTTCTATTTTCTATAACACAAGATAAAATAAAGTCAAGCTGTTTTCATATAATTTGTAAGCTGTTTTATAACCTATCATCCAACATTACAATTTTAACTTCATCGAACAATGTTTTGAACTACGTAGACCAAATTAAAGAGTGCACGAAAAGTAATCATATTTTGTAAGAAATACAAAAAACTAATTTTTTTTTTTTTTTTATCATTCTCTAATAGTTCAGGTAGCACATAAATACATTTTTAATAAACCATTCTCTAAGGAAAAACACTCTAATCACATTGCAAAGTGCAAACCACCACCACTCACCCACCCACCCCCTGTCCTAAAATAAAATAAGTTACACTAATCCTAACCATCACCATAGCGACCAGTTGAAATAACGCAATCCAGCGAATACTAACTTTTATGAATATTACTACTTGGCGACGATGTAGTACATTAGCTATTTTGTCCATCAAACAATGCTAGCAAGGGTAGCTACTAGGAAGAGTTTCCGGTATGAAATAGCTCGACCTATAGAATAGGGAGAGGAGTGGACTCTGTTATATTTATTCTTCATGATCGGCAACCAAGGAAAAGGAATCCAAAGCTACTTAGCTACACGTCGAAGGTATTCTTCAATATCCTGCCCAAATTTATTAAAATTTGGGAATAGATACATAATTTTTAGTGGTCTTGATACATAACAAGCCATCATCTTTTGCTGCTATGTTTTGGACCTTTTGGTTTCTTTTTCTTGTTTTTGGAAGGAGGCCCTTTTGGTTTCTGAATCGCGCCGATCTGCAGGATTTAATCTTACTACTAAATAGTTTTATCTTTGGTAATGCTTCCATGATTGGTAGTTTTGGTCTGTTTGTTGTTAGTTTTTGAAGTGACAAAATTAATCTTGTGCTTGTGCAGTGCGATTGCAAAGCATCTTAAACTCCCGCCAGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCGGTTAAAGATTATAAAGCTAAGCGTGCCTCGGCTACTGCGGCCACGGGAGACAAATCTGCCACTGCATGA
Protein sequence

>MS.gene038497.t1

MLRIAKKLVQTASFESPIPAIRVLPRFYHETVVDHYENPRNVGSFNKEERDVGSALVGAPACGDVMKFQIKVDDNGTIVDSCFKTFGCGSAIASSSVATEWVKGKQIEEVLSIKNTAIAKHLKLPPVKLHCSMLAEDAIKAAVKDYKAKRASATAATGDKSATA