Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039787.t1 | XP_003598694.1 | 97.9 | 291 | 6 | 0 | 1 | 291 | 1 | 291 | 1.90E-160 | 575.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039787.t1 | Q0VD01 | 54.5 | 292 | 128 | 3 | 1 | 291 | 1 | 288 | 3.1e-87 | 323.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039787.t1 | G7IW56 | 97.9 | 291 | 6 | 0 | 1 | 291 | 1 | 291 | 1.3e-160 | 575.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039787.t1 | MTR_3g019370 | 97.938 | 291 | 6 | 0 | 1 | 291 | 1 | 291 | 0.0 | 587 |
| MS.gene039787.t1 | MTR_8g023820 | 33.219 | 292 | 142 | 7 | 50 | 291 | 66 | 354 | 4.22e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039787.t1 | AT1G63780 | 73.973 | 292 | 75 | 1 | 1 | 291 | 1 | 292 | 7.25e-165 | 459 |
| MS.gene039787.t1 | AT4G01560 | 34.437 | 302 | 162 | 9 | 14 | 291 | 54 | 343 | 1.26e-41 | 147 |
Find 54 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGTCCTACTGCATATTT+TGG | 0.152617 | 3.3:+11875873 | MS.gene039787:CDS |
| TCCTTCAATTCTACAGATTT+AGG | 0.221306 | 3.3:-11877831 | None:intergenic |
| CATTCTAAAACATCTGTTTC+CGG | 0.297484 | 3.3:+11877591 | MS.gene039787:CDS |
| CGATTCATTCTTTCAGCATT+GGG | 0.364675 | 3.3:-11874752 | None:intergenic |
| TCATCATCAATGTGTGATCT+TGG | 0.367314 | 3.3:-11874500 | None:intergenic |
| AATAATATGCGGATAAGCTT+CGG | 0.371784 | 3.3:-11876025 | None:intergenic |
| TCTGTAGAATTGAAGGAAAT+TGG | 0.387754 | 3.3:+11877837 | MS.gene039787:CDS |
| ATAGTTTGTCATCTACCATA+TGG | 0.392644 | 3.3:+11875855 | MS.gene039787:CDS |
| TGACTATACAGATGTTATCT+TGG | 0.414988 | 3.3:+11875800 | MS.gene039787:CDS |
| CGAGATATAGTCAGACTTGT+TGG | 0.426562 | 3.3:-11877650 | None:intergenic |
| AGTCTGACTATATCTCGTTC+AGG | 0.430003 | 3.3:+11877656 | MS.gene039787:CDS |
| ATAATATGCGGATAAGCTTC+GGG | 0.448452 | 3.3:-11876024 | None:intergenic |
| TCCTAAATCTGTAGAATTGA+AGG | 0.458118 | 3.3:+11877830 | MS.gene039787:CDS |
| AACTGTTTGAGTGGAGCGCT+TGG | 0.459070 | 3.3:-11874578 | None:intergenic |
| GAGTGGAGCGCTTGGATCCC+TGG | 0.464338 | 3.3:-11874570 | None:intergenic |
| ACGATTCATTCTTTCAGCAT+TGG | 0.464351 | 3.3:-11874753 | None:intergenic |
| TCTTCGTCGCGAAATTGATC+TGG | 0.465080 | 3.3:+11872533 | MS.gene039787:CDS |
| TGACAAACTATTAAACCATC+TGG | 0.466080 | 3.3:-11875843 | None:intergenic |
| GTTGTTCCTTGCAGGTTACA+AGG | 0.469398 | 3.3:+11875965 | MS.gene039787:intron |
| AAATATGCAGTAGGACCATA+TGG | 0.471997 | 3.3:-11875870 | None:intergenic |
| CATCATCAATGTGTGATCTT+GGG | 0.478264 | 3.3:-11874499 | None:intergenic |
| AAATTCTGCTGACCACATCC+AGG | 0.485156 | 3.3:+11874552 | MS.gene039787:CDS |
| TTCCGTGTAGTGTTCATGTA+AGG | 0.489124 | 3.3:-11878555 | None:intergenic |
| TCCACTCAAACAGTTTGTAA+AGG | 0.502089 | 3.3:+11874586 | MS.gene039787:CDS |
| ACCTTTACAAACTGTTTGAG+TGG | 0.503052 | 3.3:-11874587 | None:intergenic |
| AAAATCAGAGAAGCTCTTCG+AGG | 0.516780 | 3.3:+11872383 | MS.gene039787:CDS |
| AAGAATGAATCGTGGTGGTC+AGG | 0.523960 | 3.3:+11874763 | MS.gene039787:CDS |
| AGCTTCGGGCATGGTTCCAA+CGG | 0.525645 | 3.3:-11876010 | None:intergenic |
| GCAGATAAAATTAGGAACAG+TGG | 0.540090 | 3.3:+11878497 | MS.gene039787:intron |
| GCATCATATATATGAAAAGC+AGG | 0.552365 | 3.3:+11877803 | MS.gene039787:CDS |
| TGAGCTGAGAAACGAGGAAG+CGG | 0.553112 | 3.3:+11872509 | MS.gene039787:CDS |
| CTGGAAGATGAAAACACAGC+TGG | 0.566258 | 3.3:+11872552 | MS.gene039787:CDS |
| ACATGAACACTACACGGAAG+AGG | 0.568800 | 3.3:+11878559 | MS.gene039787:CDS |
| GCTGTAAACAGTTAGGTGAA+AGG | 0.571363 | 3.3:+11877560 | MS.gene039787:intron |
| GATACTCTCTTCGCAAACGT+TGG | 0.576621 | 3.3:-11872307 | None:intergenic |
| AGCGCTTGGATCCCTGGATG+TGG | 0.588133 | 3.3:-11874564 | None:intergenic |
| AGTAATCCAAAATATGCAGT+AGG | 0.590553 | 3.3:-11875879 | None:intergenic |
| TCCTCGTTTCTCAGCTCAGT+AGG | 0.592322 | 3.3:-11872504 | None:intergenic |
| ATTAGAGACAGAAAAGCCGT+TGG | 0.603528 | 3.3:+11875994 | MS.gene039787:CDS |
| CATCTGTATAGTCATGTGAT+CGG | 0.609305 | 3.3:-11875791 | None:intergenic |
| AATTCTGCTGACCACATCCA+GGG | 0.624410 | 3.3:+11874553 | MS.gene039787:CDS |
| CATATATATGAAAAGCAGGC+GGG | 0.633112 | 3.3:+11877807 | MS.gene039787:CDS |
| ATGCGGATAAGCTTCGGGCA+TGG | 0.635152 | 3.3:-11876019 | None:intergenic |
| GAACACCGAGGTGTGCCAGA+TGG | 0.638084 | 3.3:+11875828 | MS.gene039787:CDS |
| GACCTTACATGAACACTACA+CGG | 0.644746 | 3.3:+11878553 | MS.gene039787:CDS |
| TCATATATATGAAAAGCAGG+CGG | 0.651248 | 3.3:+11877806 | MS.gene039787:CDS |
| ACCTACTGAGCTGAGAAACG+AGG | 0.675140 | 3.3:+11872503 | MS.gene039787:CDS |
| TATAGACGCAACTCAAAACG+TGG | 0.685542 | 3.3:-11877861 | None:intergenic |
| TTAAACCATCTGGCACACCT+CGG | 0.692377 | 3.3:-11875833 | None:intergenic |
| AAATTATCAAGAATAATATG+CGG | 0.698309 | 3.3:-11876036 | None:intergenic |
| TGATGAGTATGCATTTGCTG+CGG | 0.732285 | 3.3:+11874517 | MS.gene039787:CDS |
| GCTGAAAGAATGAATCGTGG+TGG | 0.764437 | 3.3:+11874758 | MS.gene039787:CDS |
| AATGCTGAAAGAATGAATCG+TGG | 0.776928 | 3.3:+11874755 | MS.gene039787:CDS |
| ATCTTGGTTCATGAACACCG+AGG | 0.787086 | 3.3:+11875816 | MS.gene039787:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATAATTGTATGAA+AGG | + | chr3.3:11873874-11873893 | MS.gene039787:intron | 10.0% |
| !! | ATTAAAAACATTAATAAATC+AGG | - | chr3.3:11875432-11875451 | None:intergenic | 10.0% |
| !! | TTAAAAACATTAATAAATCA+GGG | - | chr3.3:11875431-11875450 | None:intergenic | 10.0% |
| !! | TTTATAGTATTATTTAAGAA+AGG | + | chr3.3:11874071-11874090 | MS.gene039787:intron | 10.0% |
| !!! | AATATCATCATTATTTTTTT+CGG | - | chr3.3:11875731-11875750 | None:intergenic | 10.0% |
| !!! | GTTTATTTATTTTTTGAATT+GGG | + | chr3.3:11872967-11872986 | MS.gene039787:intron | 10.0% |
| !!! | TGTTTATTTATTTTTTGAAT+TGG | + | chr3.3:11872966-11872985 | MS.gene039787:intron | 10.0% |
| !! | AAATTATCAAGAATAATATG+CGG | - | chr3.3:11876039-11876058 | None:intergenic | 15.0% |
| !! | AATATGGAAAATTGATTATT+TGG | + | chr3.3:11874837-11874856 | MS.gene039787:intron | 15.0% |
| !! | ACAAGAAAATATTGAATTAT+TGG | - | chr3.3:11878102-11878121 | None:intergenic | 15.0% |
| !! | ACAATTATTATTTATTTCAG+TGG | - | chr3.3:11873869-11873888 | None:intergenic | 15.0% |
| !! | AGTATTATAATTGATATAGA+TGG | - | chr3.3:11877269-11877288 | None:intergenic | 15.0% |
| !! | ATTTCTATAACAAAAGATAA+AGG | + | chr3.3:11873098-11873117 | MS.gene039787:intron | 15.0% |
| !! | GGCATATAATTAAAAAAATA+TGG | - | chr3.3:11876924-11876943 | None:intergenic | 15.0% |
| !! | TAATATTAGATAATATGCTT+GGG | + | chr3.3:11875053-11875072 | MS.gene039787:intron | 15.0% |
| !! | TATGTGAAGTATAAAATATT+TGG | - | chr3.3:11874643-11874662 | None:intergenic | 15.0% |
| !! | TTAATATTAGATAATATGCT+TGG | + | chr3.3:11875052-11875071 | MS.gene039787:intron | 15.0% |
| !!! | AAATAATTTATTTGCTATTG+TGG | + | chr3.3:11875506-11875525 | MS.gene039787:intron | 15.0% |
| !!! | AATTATTACTTTTTAAACCT+TGG | + | chr3.3:11873662-11873681 | MS.gene039787:intron | 15.0% |
| !!! | GCTTTTATGTTAATTTATAA+TGG | - | chr3.3:11872741-11872760 | None:intergenic | 15.0% |
| !! | AAAAAAACTGTATAGAGATA+TGG | - | chr3.3:11875247-11875266 | None:intergenic | 20.0% |
| !! | AAATGTAATGTGTAAAATGT+TGG | - | chr3.3:11875161-11875180 | None:intergenic | 20.0% |
| !! | AACATTAGAAATACTTCATT+TGG | + | chr3.3:11876324-11876343 | MS.gene039787:intron | 20.0% |
| !! | AAGATGAAATGAAGTTAAAT+TGG | + | chr3.3:11873208-11873227 | MS.gene039787:intron | 20.0% |
| !! | AATATTAGATAATATGCTTG+GGG | + | chr3.3:11875054-11875073 | MS.gene039787:intron | 20.0% |
| !! | AATTGCTAAAAAAAAACTCA+TGG | - | chr3.3:11873646-11873665 | None:intergenic | 20.0% |
| !! | ACCAGAAAATATTGAATTAT+TGG | - | chr3.3:11878046-11878065 | None:intergenic | 20.0% |
| !! | ATCAAAATATAGAATGATTG+TGG | + | chr3.3:11876204-11876223 | MS.gene039787:intron | 20.0% |
| !! | ATGGTTAATATTAATAACAC+AGG | - | chr3.3:11876905-11876924 | None:intergenic | 20.0% |
| !! | CTTAATCTTATTATGTAAGT+CGG | - | chr3.3:11876565-11876584 | None:intergenic | 20.0% |
| !! | GGAATTATAGTTATTTACTT+CGG | + | chr3.3:11874302-11874321 | MS.gene039787:intron | 20.0% |
| !! | TAAGTAAAATTAAACGATGT+AGG | + | chr3.3:11876270-11876289 | MS.gene039787:intron | 20.0% |
| !! | TATATTGAGGTTATATTCAA+TGG | - | chr3.3:11876765-11876784 | None:intergenic | 20.0% |
| !! | TATTAGTATATTAACTTCAC+AGG | - | chr3.3:11875021-11875040 | None:intergenic | 20.0% |
| !! | TCATAAAAACCAAATTTCAA+AGG | - | chr3.3:11874365-11874384 | None:intergenic | 20.0% |
| !! | TTCAAGAGAATATCTATTAT+TGG | - | chr3.3:11878141-11878160 | None:intergenic | 20.0% |
| !!! | AATATCTTGAATTTTATGAG+TGG | + | chr3.3:11874245-11874264 | MS.gene039787:intron | 20.0% |
| !!! | ACCAATAATTCAATATTTTC+TGG | + | chr3.3:11878042-11878061 | MS.gene039787:intron | 20.0% |
| !!! | ATTTGGATTTTCAATTCTTT+TGG | - | chr3.3:11874918-11874937 | None:intergenic | 20.0% |
| !!! | CTTCATTTTTTTTTTTGTGT+AGG | + | chr3.3:11874712-11874731 | MS.gene039787:intron | 20.0% |
| !!! | CTTTTTTGCATTATTGTTAA+TGG | + | chr3.3:11873611-11873630 | MS.gene039787:intron | 20.0% |
| !!! | GTGTTAACTATATAGATTTT+AGG | + | chr3.3:11875925-11875944 | MS.gene039787:intron | 20.0% |
| !!! | TCTTGATAATTTTGAAACTA+AGG | + | chr3.3:11876047-11876066 | MS.gene039787:CDS | 20.0% |
| !!! | TGAGTGAATTTTGTAAATAA+TGG | + | chr3.3:11872610-11872629 | MS.gene039787:intron | 20.0% |
| !!! | TGTTTTAAAATGTTAATGTG+TGG | + | chr3.3:11873579-11873598 | MS.gene039787:intron | 20.0% |
| !!! | TTAATTTTCACACTGTTATT+TGG | + | chr3.3:11875447-11875466 | MS.gene039787:intron | 20.0% |
| !!! | TTATGCAAATAAGCTTTTTA+TGG | + | chr3.3:11872678-11872697 | MS.gene039787:intron | 20.0% |
| !!! | TTATGTAGAAAGTACAATAA+TGG | - | chr3.3:11875209-11875228 | None:intergenic | 20.0% |
| !!! | TTGTAAATAATGGTTCTATT+TGG | + | chr3.3:11872620-11872639 | MS.gene039787:intron | 20.0% |
| !!! | TTTATTTTTTGAATTGGGAA+AGG | + | chr3.3:11872972-11872991 | MS.gene039787:intron | 20.0% |
| !!! | TTTGTACATACTAATTTTAC+TGG | + | chr3.3:11876100-11876119 | MS.gene039787:intron | 20.0% |
| ! | AATTGATATAGATGGTGATT+AGG | - | chr3.3:11877261-11877280 | None:intergenic | 25.0% |
| ! | CAATGCAAAAATATCTTCAA+GGG | - | chr3.3:11875349-11875368 | None:intergenic | 25.0% |
| ! | CTCATCAACTCTTATTATTA+GGG | - | chr3.3:11876686-11876705 | None:intergenic | 25.0% |
| ! | GCACATATAGAAAATGATAA+CGG | - | chr3.3:11874813-11874832 | None:intergenic | 25.0% |
| ! | GCATGTTATATCATATATAC+TGG | + | chr3.3:11875368-11875387 | MS.gene039787:intron | 25.0% |
| ! | GCTTAAACCAAAAAAAATGT+TGG | - | chr3.3:11875615-11875634 | None:intergenic | 25.0% |
| ! | TAAAATAAGCCTAATCCAAA+CGG | - | chr3.3:11872655-11872674 | None:intergenic | 25.0% |
| ! | TATAGCATATAAGCAGTTTA+TGG | + | chr3.3:11878254-11878273 | MS.gene039787:intron | 25.0% |
| ! | TCAGTACTTCAATCATAATT+TGG | - | chr3.3:11876486-11876505 | None:intergenic | 25.0% |
| ! | TCATCAACTCTTATTATTAG+GGG | - | chr3.3:11876685-11876704 | None:intergenic | 25.0% |
| ! | TCTCATCAACTCTTATTATT+AGG | - | chr3.3:11876687-11876706 | None:intergenic | 25.0% |
| ! | TCTTGGATAACTTATGAAAA+CGG | + | chr3.3:11873265-11873284 | MS.gene039787:intron | 25.0% |
| ! | TGAAATAACCTGAAATGAAA+GGG | - | chr3.3:11875754-11875773 | None:intergenic | 25.0% |
| ! | TTATGTCAGTTAAGAATCAT+GGG | + | chr3.3:11873969-11873988 | MS.gene039787:intron | 25.0% |
| ! | TTCTATATGTGCTTGTAATA+TGG | + | chr3.3:11874821-11874840 | MS.gene039787:intron | 25.0% |
| ! | TTGTGATTATTGATCATGTT+TGG | + | chr3.3:11872885-11872904 | MS.gene039787:intron | 25.0% |
| ! | TTTATGTCAGTTAAGAATCA+TGG | + | chr3.3:11873968-11873987 | MS.gene039787:intron | 25.0% |
| !! | AAAAAGTTGATTATCCAAAC+AGG | - | chr3.3:11873125-11873144 | None:intergenic | 25.0% |
| !! | AACCATTTTGTATCAACTTT+CGG | + | chr3.3:11878199-11878218 | MS.gene039787:intron | 25.0% |
| !! | AACCTTTTGCAGATAAAATT+AGG | + | chr3.3:11878489-11878508 | MS.gene039787:intron | 25.0% |
| !! | AACTATTACTGATTAGTTAG+AGG | - | chr3.3:11875685-11875704 | None:intergenic | 25.0% |
| !! | CTGCTCATAAAATTTCTTTT+TGG | + | chr3.3:11877538-11877557 | MS.gene039787:intron | 25.0% |
| !! | TTCAACTTTAGGAATAAGAT+TGG | - | chr3.3:11878456-11878475 | None:intergenic | 25.0% |
| !! | TTCCTAATTTTATCTGCAAA+AGG | - | chr3.3:11878494-11878513 | None:intergenic | 25.0% |
| !!! | AAACAGATGTTTTAGAATGT+TGG | - | chr3.3:11877590-11877609 | None:intergenic | 25.0% |
| !!! | AATTTTGTTGTTTTTGCAGA+AGG | + | chr3.3:11872471-11872490 | MS.gene039787:intron | 25.0% |
| !!! | AGAGCACTTTTATCAATTTT+TGG | + | chr3.3:11874281-11874300 | MS.gene039787:intron | 25.0% |
| !!! | AGTTTTTGGTATTCAACTTT+AGG | - | chr3.3:11878467-11878486 | None:intergenic | 25.0% |
| !!! | ATATTTTGGATTACTCAATG+TGG | + | chr3.3:11875887-11875906 | MS.gene039787:CDS | 25.0% |
| !!! | ATCTATTCCATATGTTTTTG+TGG | + | chr3.3:11877071-11877090 | MS.gene039787:intron | 25.0% |
| !!! | ATTACTTTTTAAACCTTGGT+TGG | + | chr3.3:11873666-11873685 | MS.gene039787:intron | 25.0% |
| !!! | ATTATTTTGACACATACATG+AGG | - | chr3.3:11875493-11875512 | None:intergenic | 25.0% |
| !!! | ATTTTGTTGTTTTTGCAGAA+GGG | + | chr3.3:11872472-11872491 | MS.gene039787:intron | 25.0% |
| !!! | CAGAAAGGTAATTATTTTTG+CGG | - | chr3.3:11877358-11877377 | None:intergenic | 25.0% |
| !!! | TCAACTTTTTTGTAGCTTAT+AGG | + | chr3.3:11873135-11873154 | MS.gene039787:intron | 25.0% |
| !!! | TCTATTCCATATGTTTTTGT+GGG | + | chr3.3:11877072-11877091 | MS.gene039787:intron | 25.0% |
| !!! | TGTTTTGAATACTGCAAAAA+AGG | - | chr3.3:11876237-11876256 | None:intergenic | 25.0% |
| !!! | TTACTTTTTAAACCTTGGTT+GGG | + | chr3.3:11873667-11873686 | MS.gene039787:intron | 25.0% |
| !!! | TTTACAGAAGCACTTATTAA+AGG | - | chr3.3:11877222-11877241 | None:intergenic | 25.0% |
| AAAATAAGCCTAATCCAAAC+GGG | - | chr3.3:11872654-11872673 | None:intergenic | 30.0% | |
| AAACATATAAGCTTATAGCG+TGG | + | chr3.3:11872797-11872816 | MS.gene039787:intron | 30.0% | |
| AAAGTCCGAAAATTATCAGA+AGG | - | chr3.3:11876161-11876180 | None:intergenic | 30.0% | |
| AACCAAAAAAAATGTTGGAC+AGG | - | chr3.3:11875610-11875629 | None:intergenic | 30.0% | |
| AAGCACTTATTAAAGGTAGT+TGG | - | chr3.3:11877215-11877234 | None:intergenic | 30.0% | |
| AAGGTAGTTGGGAAATAAAA+AGG | - | chr3.3:11877203-11877222 | None:intergenic | 30.0% | |
| AATAATATGCGGATAAGCTT+CGG | - | chr3.3:11876028-11876047 | None:intergenic | 30.0% | |
| ACGCAACAGTAGAAAATATT+TGG | - | chr3.3:11874935-11874954 | None:intergenic | 30.0% | |
| ACGCTATAAGCTTATATGTT+TGG | - | chr3.3:11872798-11872817 | None:intergenic | 30.0% | |
| AGCACTTATTAAAGGTAGTT+GGG | - | chr3.3:11877214-11877233 | None:intergenic | 30.0% | |
| AGGTCAATTTGGAAAAGATT+AGG | + | chr3.3:11876997-11877016 | MS.gene039787:intron | 30.0% | |
| AGTAATCCAAAATATGCAGT+AGG | - | chr3.3:11875882-11875901 | None:intergenic | 30.0% | |
| ATGATATTCCCTTTCATTTC+AGG | + | chr3.3:11875743-11875762 | MS.gene039787:intron | 30.0% | |
| ATTTAACTGTGTCTCTCATA+TGG | + | chr3.3:11874427-11874446 | MS.gene039787:intron | 30.0% | |
| CAACTTATGACATTGTTCAT+AGG | - | chr3.3:11873291-11873310 | None:intergenic | 30.0% | |
| CTATACAGAAAAAGCTTAGA+AGG | + | chr3.3:11872329-11872348 | MS.gene039787:CDS | 30.0% | |
| CTGAAATAACCTGAAATGAA+AGG | - | chr3.3:11875755-11875774 | None:intergenic | 30.0% | |
| CTGTTAACTTTCTCTTGTTA+CGG | + | chr3.3:11877738-11877757 | MS.gene039787:intron | 30.0% | |
| GAAAGTCAAATGCATAAAAC+CGG | - | chr3.3:11877696-11877715 | None:intergenic | 30.0% | |
| GAAATACTTCATTTGGAGAA+TGG | + | chr3.3:11876331-11876350 | MS.gene039787:intron | 30.0% | |
| GAACTTAATTAACACAAACC+TGG | - | chr3.3:11877887-11877906 | None:intergenic | 30.0% | |
| GATAAGCACTTATCATGATA+AGG | - | chr3.3:11872827-11872846 | None:intergenic | 30.0% | |
| GCAATGCAAAAATATCTTCA+AGG | - | chr3.3:11875350-11875369 | None:intergenic | 30.0% | |
| GCATCATATATATGAAAAGC+AGG | + | chr3.3:11877803-11877822 | MS.gene039787:CDS | 30.0% | |
| GCTAGTAGATAAGCTTAAAT+AGG | + | chr3.3:11873506-11873525 | MS.gene039787:intron | 30.0% | |
| TAAGCTCAGTAGAATGATTA+AGG | + | chr3.3:11876713-11876732 | MS.gene039787:intron | 30.0% | |
| TATAATTGATATCCGACCTT+AGG | + | chr3.3:11876977-11876996 | MS.gene039787:intron | 30.0% | |
| TCAATTAAGCCAATGCAAAT+AGG | + | chr3.3:11873363-11873382 | MS.gene039787:intron | 30.0% | |
| TCAGTTAAGGTTGAATTGAT+CGG | + | chr3.3:11873714-11873733 | MS.gene039787:intron | 30.0% | |
| TCATATATATGAAAAGCAGG+CGG | + | chr3.3:11877806-11877825 | MS.gene039787:CDS | 30.0% | |
| TCCTAAATCTGTAGAATTGA+AGG | + | chr3.3:11877830-11877849 | MS.gene039787:CDS | 30.0% | |
| TCCTTCAATTCTACAGATTT+AGG | - | chr3.3:11877834-11877853 | None:intergenic | 30.0% | |
| TCTGTAGAATTGAAGGAAAT+TGG | + | chr3.3:11877837-11877856 | MS.gene039787:CDS | 30.0% | |
| TGACAAACTATTAAACCATC+TGG | - | chr3.3:11875846-11875865 | None:intergenic | 30.0% | |
| TGACTATACAGATGTTATCT+TGG | + | chr3.3:11875800-11875819 | MS.gene039787:CDS | 30.0% | |
| TGTTGCGTTAGCAAAAATAT+GGG | + | chr3.3:11874947-11874966 | MS.gene039787:intron | 30.0% | |
| TTACCTTTAGTTAGCATCTT+TGG | + | chr3.3:11873050-11873069 | MS.gene039787:intron | 30.0% | |
| TTCAATCATAATTTGGACCA+GGG | - | chr3.3:11876479-11876498 | None:intergenic | 30.0% | |
| TTTAACTGTGTCTCTCATAT+GGG | + | chr3.3:11874428-11874447 | MS.gene039787:intron | 30.0% | |
| TTTCAATGTGAACATATGCT+TGG | - | chr3.3:11877117-11877136 | None:intergenic | 30.0% | |
| TTTCTTCCCACAAAAACATA+TGG | - | chr3.3:11877081-11877100 | None:intergenic | 30.0% | |
| ! | AAGCAGTGTTACTATTGTTA+TGG | - | chr3.3:11877502-11877521 | None:intergenic | 30.0% |
| ! | AATAATGGAACATAGTGATC+TGG | - | chr3.3:11875194-11875213 | None:intergenic | 30.0% |
| ! | ACTCATAAAAGCCTTGTAAT+TGG | + | chr3.3:11874184-11874203 | MS.gene039787:intron | 30.0% |
| ! | AGTGTTACTATTGTTATGGA+TGG | - | chr3.3:11877498-11877517 | None:intergenic | 30.0% |
| ! | ATAATGGAACATAGTGATCT+GGG | - | chr3.3:11875193-11875212 | None:intergenic | 30.0% |
| ! | ATAGTTTGTCATCTACCATA+TGG | + | chr3.3:11875855-11875874 | MS.gene039787:CDS | 30.0% |
| ! | ATCTTTTCCAAATTGACCTA+AGG | - | chr3.3:11876996-11877015 | None:intergenic | 30.0% |
| ! | CATACTAATTTTACTGGCAA+TGG | + | chr3.3:11876106-11876125 | MS.gene039787:intron | 30.0% |
| ! | GAACAAAATTGTTCTAGCTA+TGG | - | chr3.3:11873757-11873776 | None:intergenic | 30.0% |
| ! | TGGCATTCCAAATCTATTTT+AGG | - | chr3.3:11874329-11874348 | None:intergenic | 30.0% |
| ! | TGGCTTATTTAGAGTTTCTA+TGG | + | chr3.3:11875388-11875407 | MS.gene039787:intron | 30.0% |
| !! | AACCGAAAGTTGATACAAAA+TGG | - | chr3.3:11878204-11878223 | None:intergenic | 30.0% |
| !! | AATGATAACGGAGGATAAAA+TGG | - | chr3.3:11874801-11874820 | None:intergenic | 30.0% |
| !! | CATATAGAAAATGATAACGG+AGG | - | chr3.3:11874810-11874829 | None:intergenic | 30.0% |
| !! | CATTCTAAAACATCTGTTTC+CGG | + | chr3.3:11877591-11877610 | MS.gene039787:CDS | 30.0% |
| !! | CTTTGTTGTTAGCAATTGTA+TGG | + | chr3.3:11877918-11877937 | MS.gene039787:intron | 30.0% |
| !! | TATAGCGCTGATGAATAAAT+TGG | + | chr3.3:11874212-11874231 | MS.gene039787:intron | 30.0% |
| !! | TCAGGTTAGTTTCATTTATC+CGG | + | chr3.3:11877674-11877693 | MS.gene039787:intron | 30.0% |
| !!! | AAATTTTTTGAAATCGACGC+AGG | + | chr3.3:11878394-11878413 | MS.gene039787:intron | 30.0% |
| !!! | AATGTTTTAGCCAAATGCTA+TGG | - | chr3.3:11876310-11876329 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGCCTTTGAAATT+TGG | + | chr3.3:11874353-11874372 | MS.gene039787:intron | 30.0% |
| AAATATGCAGTAGGACCATA+TGG | - | chr3.3:11875873-11875892 | None:intergenic | 35.0% | |
| AACGGAGGATAAAATGGTAA+AGG | - | chr3.3:11874795-11874814 | None:intergenic | 35.0% | |
| AAGAAACAGATCAATCATGC+AGG | - | chr3.3:11876376-11876395 | None:intergenic | 35.0% | |
| AAGCTGTTTACAGTCCAAAT+TGG | - | chr3.3:11877301-11877320 | None:intergenic | 35.0% | |
| AATGACCTTCAGTTCAGTTA+AGG | + | chr3.3:11873701-11873720 | MS.gene039787:intron | 35.0% | |
| AATGCTGAAAGAATGAATCG+TGG | + | chr3.3:11874755-11874774 | MS.gene039787:CDS | 35.0% | |
| AATTATATGCCGTGTACTCA+TGG | + | chr3.3:11876933-11876952 | MS.gene039787:intron | 35.0% | |
| AATTTGGACTGTAAACAGCT+TGG | + | chr3.3:11877300-11877319 | MS.gene039787:intron | 35.0% | |
| ACAAGTCTAGCAATCAATCA+TGG | + | chr3.3:11876437-11876456 | MS.gene039787:intron | 35.0% | |
| ACACCAAAGATGCTAACTAA+AGG | - | chr3.3:11873056-11873075 | None:intergenic | 35.0% | |
| ACCTTTACAAACTGTTTGAG+TGG | - | chr3.3:11874590-11874609 | None:intergenic | 35.0% | |
| ACGATTCATTCTTTCAGCAT+TGG | - | chr3.3:11874756-11874775 | None:intergenic | 35.0% | |
| AGAAAGGTGACATTTCATTC+AGG | + | chr3.3:11874087-11874106 | MS.gene039787:intron | 35.0% | |
| AGCATCTAATGAGGAAAAGA+TGG | + | chr3.3:11876608-11876627 | MS.gene039787:intron | 35.0% | |
| ATAAATAGCCCGTTTGGATT+AGG | + | chr3.3:11872643-11872662 | MS.gene039787:intron | 35.0% | |
| ATAATATGCGGATAAGCTTC+GGG | - | chr3.3:11876027-11876046 | None:intergenic | 35.0% | |
| ATATTGTATCTGCTGCATAC+AGG | + | chr3.3:11877781-11877800 | MS.gene039787:intron | 35.0% | |
| ATGACTCTGTTTATTCGATC+TGG | + | chr3.3:11875567-11875586 | MS.gene039787:intron | 35.0% | |
| ATTATATGCCGTGTACTCAT+GGG | + | chr3.3:11876934-11876953 | MS.gene039787:intron | 35.0% | |
| ATTTGGATAAATAGCCCGTT+TGG | + | chr3.3:11872637-11872656 | MS.gene039787:intron | 35.0% | |
| CAAAAGATAAAGGTCCTGTT+TGG | + | chr3.3:11873108-11873127 | MS.gene039787:intron | 35.0% | |
| CAGTGAGTTTAGTGTAACTA+CGG | - | chr3.3:11874681-11874700 | None:intergenic | 35.0% | |
| CAGTTAAGGTTGAATTGATC+GGG | + | chr3.3:11873715-11873734 | MS.gene039787:intron | 35.0% | |
| CATAACATCCTCTTTGAATC+AGG | + | chr3.3:11874995-11875014 | MS.gene039787:intron | 35.0% | |
| CATATATATGAAAAGCAGGC+GGG | + | chr3.3:11877807-11877826 | MS.gene039787:CDS | 35.0% | |
| CATCATCAATGTGTGATCTT+GGG | - | chr3.3:11874502-11874521 | None:intergenic | 35.0% | |
| CATCTGTATAGTCATGTGAT+CGG | - | chr3.3:11875794-11875813 | None:intergenic | 35.0% | |
| CCTCGAAGACAATTGTAAAA+TGG | + | chr3.3:11873834-11873853 | MS.gene039787:intron | 35.0% | |
| CGATTCATTCTTTCAGCATT+GGG | - | chr3.3:11874755-11874774 | None:intergenic | 35.0% | |
| CTGTTGCGTTAGCAAAAATA+TGG | + | chr3.3:11874946-11874965 | MS.gene039787:intron | 35.0% | |
| CTTATTATTAGGGGCTTCTA+GGG | - | chr3.3:11876676-11876695 | None:intergenic | 35.0% | |
| CTTCAATCATAATTTGGACC+AGG | - | chr3.3:11876480-11876499 | None:intergenic | 35.0% | |
| CTTCGGACCTAAAATAGATT+TGG | + | chr3.3:11874319-11874338 | MS.gene039787:intron | 35.0% | |
| GAATATATTGTGCTGCAACT+GGG | + | chr3.3:11877996-11878015 | MS.gene039787:intron | 35.0% | |
| GCAGATAAAATTAGGAACAG+TGG | + | chr3.3:11878497-11878516 | MS.gene039787:intron | 35.0% | |
| GCTATATTGCTCCAATTACA+AGG | - | chr3.3:11874198-11874217 | None:intergenic | 35.0% | |
| GCTGTAAACAGTTATGTGAA+AGG | + | chr3.3:11877434-11877453 | MS.gene039787:intron | 35.0% | |
| TATTTCTTGCGTCTCTAACT+TGG | + | chr3.3:11878167-11878186 | MS.gene039787:intron | 35.0% | |
| TCAGAAGGTCGGATAAATAA+CGG | - | chr3.3:11876146-11876165 | None:intergenic | 35.0% | |
| TCATCATCAATGTGTGATCT+TGG | - | chr3.3:11874503-11874522 | None:intergenic | 35.0% | |
| TCCACTCAAACAGTTTGTAA+AGG | + | chr3.3:11874586-11874605 | MS.gene039787:CDS | 35.0% | |
| TCCGAAAATTATCAGAAGGT+CGG | - | chr3.3:11876157-11876176 | None:intergenic | 35.0% | |
| TCGAGACGTGATTTATATTG+AGG | - | chr3.3:11876778-11876797 | None:intergenic | 35.0% | |
| TCTTATTATTAGGGGCTTCT+AGG | - | chr3.3:11876677-11876696 | None:intergenic | 35.0% | |
| TGAATATATTGTGCTGCAAC+TGG | + | chr3.3:11877995-11878014 | MS.gene039787:intron | 35.0% | |
| TGTTGTTAGCAATTGTATGG+AGG | + | chr3.3:11877921-11877940 | MS.gene039787:intron | 35.0% | |
| TTAACTGTGTCTCTCATATG+GGG | + | chr3.3:11874429-11874448 | MS.gene039787:intron | 35.0% | |
| TTATTATTAGGGGCTTCTAG+GGG | - | chr3.3:11876675-11876694 | None:intergenic | 35.0% | |
| TTCAACCTTAACTGAACTGA+AGG | - | chr3.3:11873709-11873728 | None:intergenic | 35.0% | |
| TTGTGTCTCTTGTAGTTACA+TGG | - | chr3.3:11873805-11873824 | None:intergenic | 35.0% | |
| TTTCCAAATTGACCTAAGGT+CGG | - | chr3.3:11876992-11877011 | None:intergenic | 35.0% | |
| TTTCGGACTTTCAGTATCAT+TGG | + | chr3.3:11876170-11876189 | MS.gene039787:intron | 35.0% | |
| ! | ATTGATCTGTTTCTTGCAAG+CGG | + | chr3.3:11876381-11876400 | MS.gene039787:intron | 35.0% |
| ! | CCATTTTACAATTGTCTTCG+AGG | - | chr3.3:11873837-11873856 | None:intergenic | 35.0% |
| ! | CTGCAAAAGGTTTCAGTTTT+TGG | - | chr3.3:11878481-11878500 | None:intergenic | 35.0% |
| ! | GAGATATGGTTTTCTTGCTA+TGG | - | chr3.3:11875233-11875252 | None:intergenic | 35.0% |
| ! | TATGGTCCTACTGCATATTT+TGG | + | chr3.3:11875873-11875892 | MS.gene039787:CDS | 35.0% |
| ! | TCCGACCTTCTGATAATTTT+CGG | + | chr3.3:11876153-11876172 | MS.gene039787:intron | 35.0% |
| !! | ATACGTTTTGTGTCTGGTTT+TGG | - | chr3.3:11877619-11877638 | None:intergenic | 35.0% |
| !! | ATACTGCTTTTGTGCCAATT+TGG | + | chr3.3:11877284-11877303 | MS.gene039787:intron | 35.0% |
| !! | ATTTGGAGAATGGTTTTACG+AGG | + | chr3.3:11876341-11876360 | MS.gene039787:intron | 35.0% |
| !! | GCTGTTTTCATAGACTATCT+TGG | + | chr3.3:11873424-11873443 | MS.gene039787:intron | 35.0% |
| !!! | CTTTTTGGCTGTAAACAGTT+AGG | + | chr3.3:11877553-11877572 | MS.gene039787:intron | 35.0% |
| !!! | GCTTTTTTCACAAGCTTTCT+TGG | + | chr3.3:11873248-11873267 | MS.gene039787:intron | 35.0% |
| !!! | GTGTTGCACATAGTGTTTTT+TGG | + | chr3.3:11876534-11876553 | MS.gene039787:intron | 35.0% |
| !!! | TGCCTGTCCAACATTTTTTT+TGG | + | chr3.3:11875605-11875624 | MS.gene039787:intron | 35.0% |
| AAAATCAGAGAAGCTCTTCG+AGG | + | chr3.3:11872383-11872402 | MS.gene039787:CDS | 40.0% | |
| AACCATACAATGGGCATGTT+TGG | - | chr3.3:11873537-11873556 | None:intergenic | 40.0% | |
| AAGATTAGGTGCTCTATCAC+TGG | + | chr3.3:11877011-11877030 | MS.gene039787:intron | 40.0% | |
| ACTAAAGGTAAGAGACCTCA+AGG | - | chr3.3:11873041-11873060 | None:intergenic | 40.0% | |
| AGACCAACTCAAGAACAGAT+CGG | - | chr3.3:11878071-11878090 | None:intergenic | 40.0% | |
| AGTCTGACTATATCTCGTTC+AGG | + | chr3.3:11877656-11877675 | MS.gene039787:CDS | 40.0% | |
| ATAACCCTTGTGAGACTGTT+TGG | - | chr3.3:11873486-11873505 | None:intergenic | 40.0% | |
| ATCCAAACATGCCCATTGTA+TGG | + | chr3.3:11873532-11873551 | MS.gene039787:intron | 40.0% | |
| ATGTATTTGCAGCTTCTCGA+AGG | + | chr3.3:11874032-11874051 | MS.gene039787:intron | 40.0% | |
| ATGTGTACAGTAGTTTAGCC+AGG | + | chr3.3:11876638-11876657 | MS.gene039787:intron | 40.0% | |
| ATTAGAGACAGAAAAGCCGT+TGG | + | chr3.3:11875994-11876013 | MS.gene039787:CDS | 40.0% | |
| CAATGTGAACATATGCTTGG+TGG | - | chr3.3:11877114-11877133 | None:intergenic | 40.0% | |
| CACTTAACTTATGCTCTTGC+AGG | - | chr3.3:11876517-11876536 | None:intergenic | 40.0% | |
| CACTTTGAGCCTATTTGCAT+TGG | - | chr3.3:11873375-11873394 | None:intergenic | 40.0% | |
| CAGAAGGTCGGATAAATAAC+GGG | - | chr3.3:11876145-11876164 | None:intergenic | 40.0% | |
| CGAGATATAGTCAGACTTGT+TGG | - | chr3.3:11877653-11877672 | None:intergenic | 40.0% | |
| CTCTATCACTGGAATACTTG+TGG | + | chr3.3:11877022-11877041 | MS.gene039787:intron | 40.0% | |
| CTTCTTTGACAAGAAGCAAG+AGG | - | chr3.3:11875106-11875125 | None:intergenic | 40.0% | |
| GACCTTACATGAACACTACA+CGG | + | chr3.3:11878553-11878572 | MS.gene039787:CDS | 40.0% | |
| GCTAATATGTTGTTCCTTGC+AGG | + | chr3.3:11875957-11875976 | MS.gene039787:intron | 40.0% | |
| GCTGTAAACAGTTAGGTGAA+AGG | + | chr3.3:11877560-11877579 | MS.gene039787:intron | 40.0% | |
| TAAATCACGTCTCGAAGACT+TGG | + | chr3.3:11876783-11876802 | MS.gene039787:intron | 40.0% | |
| TAACCCTTGTGAGACTGTTT+GGG | - | chr3.3:11873485-11873504 | None:intergenic | 40.0% | |
| TACAATGGGCATGTTTGGAT+TGG | - | chr3.3:11873532-11873551 | None:intergenic | 40.0% | |
| TATAGACGCAACTCAAAACG+TGG | - | chr3.3:11877864-11877883 | None:intergenic | 40.0% | |
| TATCCGACCTTAGGTCAATT+TGG | + | chr3.3:11876986-11877005 | MS.gene039787:intron | 40.0% | |
| TCAAAGGCTCAAAAGTCTTC+TGG | - | chr3.3:11874349-11874368 | None:intergenic | 40.0% | |
| TCAAATACCCCATGAGTACA+CGG | - | chr3.3:11876945-11876964 | None:intergenic | 40.0% | |
| TCGAGAAGCTGCAAATACAT+TGG | - | chr3.3:11874032-11874051 | None:intergenic | 40.0% | |
| TTATATGCCGTGTACTCATG+GGG | + | chr3.3:11876935-11876954 | MS.gene039787:intron | 40.0% | |
| TTCCGTGTAGTGTTCATGTA+AGG | - | chr3.3:11878558-11878577 | None:intergenic | 40.0% | |
| TTGACACATACATGAGGAAC+AGG | - | chr3.3:11875487-11875506 | None:intergenic | 40.0% | |
| TTGTGTTCATCCACTTGTAC+TGG | + | chr3.3:11876879-11876898 | MS.gene039787:intron | 40.0% | |
| TTTCCGATCTGTTCTTGAGT+TGG | + | chr3.3:11878065-11878084 | MS.gene039787:intron | 40.0% | |
| ! | ACTGTAAACAGCTTGGTGAA+AGG | + | chr3.3:11877307-11877326 | MS.gene039787:intron | 40.0% |
| ! | CTGTAAACAGCTTGGTGAAA+GGG | + | chr3.3:11877308-11877327 | MS.gene039787:intron | 40.0% |
| ! | GATGTGGTCAGCAGAATTTT+AGG | - | chr3.3:11874551-11874570 | None:intergenic | 40.0% |
| ! | GTGACAATACGTTTTGTGTC+TGG | - | chr3.3:11877625-11877644 | None:intergenic | 40.0% |
| ! | GTGTCACTGGTATTACAGAA+AGG | - | chr3.3:11877373-11877392 | None:intergenic | 40.0% |
| ! | TCAATCATGGTTCTGTTGAC+AGG | + | chr3.3:11876450-11876469 | MS.gene039787:intron | 40.0% |
| ! | TGATGAGTATGCATTTGCTG+CGG | + | chr3.3:11874517-11874536 | MS.gene039787:CDS | 40.0% |
| !! | AAAGCATTTTTCCACGAGGT+CGG | - | chr3.3:11876845-11876864 | None:intergenic | 40.0% |
| !! | TCACAAAGCATTTTTCCACG+AGG | - | chr3.3:11876849-11876868 | None:intergenic | 40.0% |
| !! | TCGGATAAATAACGGGTGAA+AGG | - | chr3.3:11876138-11876157 | None:intergenic | 40.0% |
| !!! | TTTTGAGTTGCGTCTATACC+AGG | + | chr3.3:11877866-11877885 | MS.gene039787:CDS | 40.0% |
| AAATTCTGCTGACCACATCC+AGG | + | chr3.3:11874552-11874571 | MS.gene039787:CDS | 45.0% | |
| AAGAATGAATCGTGGTGGTC+AGG | + | chr3.3:11874763-11874782 | MS.gene039787:CDS | 45.0% | |
| AATTCTGCTGACCACATCCA+GGG | + | chr3.3:11874553-11874572 | MS.gene039787:CDS | 45.0% | |
| ACATGAACACTACACGGAAG+AGG | + | chr3.3:11878559-11878578 | MS.gene039787:CDS | 45.0% | |
| ACCGTGATGTCCATAGCATT+TGG | + | chr3.3:11876297-11876316 | MS.gene039787:intron | 45.0% | |
| ACTGGAATACTTGTGGACGT+AGG | + | chr3.3:11877029-11877048 | MS.gene039787:intron | 45.0% | |
| AGATCAATCATGCAGGAGAC+TGG | - | chr3.3:11876369-11876388 | None:intergenic | 45.0% | |
| AGTAGTTTAGCCAGGTGAGA+AGG | + | chr3.3:11876646-11876665 | MS.gene039787:intron | 45.0% | |
| ATAACACAGGCCAGTACAAG+TGG | - | chr3.3:11876892-11876911 | None:intergenic | 45.0% | |
| ATCTTGGTTCATGAACACCG+AGG | + | chr3.3:11875816-11875835 | MS.gene039787:CDS | 45.0% | |
| CTGGAAGATGAAAACACAGC+TGG | + | chr3.3:11872552-11872571 | MS.gene039787:CDS | 45.0% | |
| GACAAGAAGCAAGAGGAGTA+AGG | - | chr3.3:11875099-11875118 | None:intergenic | 45.0% | |
| GAGCTGTAGTAGTTAGAGCA+TGG | + | chr3.3:11873779-11873798 | MS.gene039787:intron | 45.0% | |
| GATACTCTCTTCGCAAACGT+TGG | - | chr3.3:11872310-11872329 | None:intergenic | 45.0% | |
| GATTCATATAACCGACCTCG+TGG | + | chr3.3:11876831-11876850 | MS.gene039787:intron | 45.0% | |
| GCCAAATGCTATGGACATCA+CGG | - | chr3.3:11876301-11876320 | None:intergenic | 45.0% | |
| GCTGAAAGAATGAATCGTGG+TGG | + | chr3.3:11874758-11874777 | MS.gene039787:CDS | 45.0% | |
| GTTGTTCCTTGCAGGTTACA+AGG | + | chr3.3:11875965-11875984 | MS.gene039787:intron | 45.0% | |
| TAACTTATGCTCTTGCAGGC+AGG | - | chr3.3:11876513-11876532 | None:intergenic | 45.0% | |
| TACTGAAACTCAGCACCTTG+AGG | + | chr3.3:11873023-11873042 | MS.gene039787:intron | 45.0% | |
| TCCCTCAGCAACCATACAAT+GGG | - | chr3.3:11873546-11873565 | None:intergenic | 45.0% | |
| TCTCCCAAACAGTCTCACAA+GGG | + | chr3.3:11873479-11873498 | MS.gene039787:intron | 45.0% | |
| TCTTCGTCGCGAAATTGATC+TGG | + | chr3.3:11872533-11872552 | MS.gene039787:CDS | 45.0% | |
| TGCAGGAGTAGCATCTAATG+AGG | + | chr3.3:11876599-11876618 | MS.gene039787:intron | 45.0% | |
| TTAAACCATCTGGCACACCT+CGG | - | chr3.3:11875836-11875855 | None:intergenic | 45.0% | |
| TTCACAGGCCTGATTCAAAG+AGG | - | chr3.3:11875006-11875025 | None:intergenic | 45.0% | |
| TTCATGCCTTGTAACCTGCA+AGG | - | chr3.3:11875974-11875993 | None:intergenic | 45.0% | |
| TTCCCTCAGCAACCATACAA+TGG | - | chr3.3:11873547-11873566 | None:intergenic | 45.0% | |
| TTCTCCCAAACAGTCTCACA+AGG | + | chr3.3:11873478-11873497 | MS.gene039787:intron | 45.0% | |
| !!! | GTGACACTGTTTTGAAGAGC+TGG | - | chr3.3:11873320-11873339 | None:intergenic | 45.0% |
| !!! | TTTGTGTCTGGTTTTGGCAC+CGG | - | chr3.3:11877613-11877632 | None:intergenic | 45.0% |
| !! | TTAATGAATTATTATATTTA+AGG | - | chr3.3:11875653-11875672 | None:intergenic | 5.0% |
| ACCTACTGAGCTGAGAAACG+AGG | + | chr3.3:11872503-11872522 | MS.gene039787:CDS | 50.0% | |
| ATATGGGGAGTGGGGTTTGA+TGG | + | chr3.3:11874444-11874463 | MS.gene039787:intron | 50.0% | |
| ATGAATCGTGGTGGTCAGGT+TGG | + | chr3.3:11874767-11874786 | MS.gene039787:intron | 50.0% | |
| GAGCACAAAAGCAGTGTCAC+TGG | - | chr3.3:11877386-11877405 | None:intergenic | 50.0% | |
| GCCCATTGTATGGTTGCTGA+GGG | + | chr3.3:11873542-11873561 | MS.gene039787:intron | 50.0% | |
| GTGTCTCTCATATGGGGAGT+GGG | + | chr3.3:11874435-11874454 | MS.gene039787:intron | 50.0% | |
| GTTCTGTTGACAGGTTACCC+TGG | + | chr3.3:11876459-11876478 | MS.gene039787:intron | 50.0% | |
| TAAACCTTGGTTGGGCTCGA+GGG | + | chr3.3:11873675-11873694 | MS.gene039787:intron | 50.0% | |
| TATGGGGAGTGGGGTTTGAT+GGG | + | chr3.3:11874445-11874464 | MS.gene039787:intron | 50.0% | |
| TCCTCGTTTCTCAGCTCAGT+AGG | - | chr3.3:11872507-11872526 | None:intergenic | 50.0% | |
| TGAGCTGAGAAACGAGGAAG+CGG | + | chr3.3:11872509-11872528 | MS.gene039787:CDS | 50.0% | |
| TGCCCATTGTATGGTTGCTG+AGG | + | chr3.3:11873541-11873560 | MS.gene039787:intron | 50.0% | |
| TGTCTCTCATATGGGGAGTG+GGG | + | chr3.3:11874436-11874455 | MS.gene039787:intron | 50.0% | |
| TGTGTCTCTCATATGGGGAG+TGG | + | chr3.3:11874434-11874453 | MS.gene039787:intron | 50.0% | |
| TTAAACCTTGGTTGGGCTCG+AGG | + | chr3.3:11873674-11873693 | MS.gene039787:intron | 50.0% | |
| TTATGCTCTTGCAGGCAGGT+GGG | - | chr3.3:11876509-11876528 | None:intergenic | 50.0% | |
| ! | AACTGTTTGAGTGGAGCGCT+TGG | - | chr3.3:11874581-11874600 | None:intergenic | 50.0% |
| ! | TTATTAGGGGCTTCTAGGGG+TGG | - | chr3.3:11876672-11876691 | None:intergenic | 50.0% |
| AAACCTTGGTTGGGCTCGAG+GGG | + | chr3.3:11873676-11873695 | MS.gene039787:intron | 55.0% | |
| AGCTTCGGGCATGGTTCCAA+CGG | - | chr3.3:11876013-11876032 | None:intergenic | 55.0% | |
| ATGCGGATAAGCTTCGGGCA+TGG | - | chr3.3:11876022-11876041 | None:intergenic | 55.0% | |
| CTTATGCTCTTGCAGGCAGG+TGG | - | chr3.3:11876510-11876529 | None:intergenic | 55.0% | |
| AGCGCTTGGATCCCTGGATG+TGG | - | chr3.3:11874567-11874586 | None:intergenic | 60.0% | |
| GAACACCGAGGTGTGCCAGA+TGG | + | chr3.3:11875828-11875847 | MS.gene039787:CDS | 60.0% | |
| TAACCCCTCGAGCCCAACCA+AGG | - | chr3.3:11873682-11873701 | None:intergenic | 60.0% | |
| CTAGGGGTGGCCTTCTCACC+TGG | - | chr3.3:11876659-11876678 | None:intergenic | 65.0% | |
| ! | GAGTGGAGCGCTTGGATCCC+TGG | - | chr3.3:11874573-11874592 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 11872293 | 11878593 | 11872293 | ID=MS.gene039787 |
| chr3.3 | mRNA | 11872293 | 11878593 | 11872293 | ID=MS.gene039787.t1;Parent=MS.gene039787 |
| chr3.3 | exon | 11872293 | 11872404 | 11872293 | ID=MS.gene039787.t1.exon1;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11872293 | 11872404 | 11872293 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11872490 | 11872573 | 11872490 | ID=MS.gene039787.t1.exon2;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11872490 | 11872573 | 11872490 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11874498 | 11874607 | 11874498 | ID=MS.gene039787.t1.exon3;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11874498 | 11874607 | 11874498 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11874734 | 11874784 | 11874734 | ID=MS.gene039787.t1.exon4;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11874734 | 11874784 | 11874734 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11875765 | 11875908 | 11875765 | ID=MS.gene039787.t1.exon5;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11875765 | 11875908 | 11875765 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11875979 | 11876068 | 11875979 | ID=MS.gene039787.t1.exon6;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11875979 | 11876068 | 11875979 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11877571 | 11877677 | 11877571 | ID=MS.gene039787.t1.exon7;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11877571 | 11877677 | 11877571 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11877803 | 11877887 | 11877803 | ID=MS.gene039787.t1.exon8;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11877803 | 11877887 | 11877803 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| chr3.3 | exon | 11878501 | 11878593 | 11878501 | ID=MS.gene039787.t1.exon9;Parent=MS.gene039787.t1 |
| chr3.3 | CDS | 11878501 | 11878593 | 11878501 | ID=cds.MS.gene039787.t1;Parent=MS.gene039787.t1 |
| Gene Sequence |
| Protein sequence |
