Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69373.t1 | XP_003603813.1 | 98.9 | 461 | 5 | 0 | 1 | 461 | 1 | 461 | 2.00E-255 | 891.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69373.t1 | Q06364 | 84.7 | 463 | 66 | 2 | 1 | 461 | 1 | 460 | 2.7e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69373.t1 | G7J5U6 | 98.9 | 461 | 5 | 0 | 1 | 461 | 1 | 461 | 1.4e-255 | 891.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene69373 | 0.81632 | 5.88E-52 | -1.69E-46 |
| MS.gene050085 | MS.gene69373 | 0.809287 | 2.04E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene69373 | 0.836727 | 7.90E-57 | -1.69E-46 |
| MS.gene051234 | MS.gene69373 | 0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene69373 | 0.828797 | 7.36E-55 | -1.69E-46 |
| MS.gene051382 | MS.gene69373 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene051642 | MS.gene69373 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene69373 | 0.826951 | 2.05E-54 | -1.69E-46 |
| MS.gene056097 | MS.gene69373 | 0.842776 | 2.10E-58 | -1.69E-46 |
| MS.gene056181 | MS.gene69373 | 0.816834 | 4.51E-52 | -1.69E-46 |
| MS.gene057213 | MS.gene69373 | 0.812498 | 4.11E-51 | -1.69E-46 |
| MS.gene05880 | MS.gene69373 | 0.832403 | 9.64E-56 | -1.69E-46 |
| MS.gene060563 | MS.gene69373 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene061006 | MS.gene69373 | 0.815847 | 7.50E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69373.t1 | MTR_3g114480 | 98.980 | 490 | 5 | 0 | 1 | 490 | 1 | 490 | 0.0 | 1002 |
| MS.gene69373.t1 | MTR_3g114480 | 99.000 | 400 | 4 | 0 | 91 | 490 | 54 | 453 | 0.0 | 825 |
| MS.gene69373.t1 | MTR_3g114480 | 97.549 | 408 | 10 | 0 | 83 | 490 | 16 | 423 | 0.0 | 825 |
| MS.gene69373.t1 | MTR_1g026030 | 85.567 | 485 | 56 | 5 | 1 | 482 | 1 | 474 | 0.0 | 792 |
| MS.gene69373.t1 | MTR_1g107545 | 51.500 | 200 | 33 | 4 | 138 | 337 | 25 | 160 | 4.91e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69373.t1 | AT1G20200 | 82.653 | 490 | 83 | 1 | 1 | 490 | 1 | 488 | 0.0 | 810 |
| MS.gene69373.t1 | AT1G75990 | 81.633 | 490 | 87 | 1 | 1 | 490 | 1 | 487 | 0.0 | 785 |
Find 102 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGATCTGGCTGAAATTC+GGG | 0.287672 | 3.3:-93492184 | MS.gene69373:CDS |
| GGCTGTCCGCATTGGAGATT+TGG | 0.288995 | 3.3:-93489867 | MS.gene69373:CDS |
| TTGGAGATTTGGAGCTGTTT+AGG | 0.292663 | 3.3:-93489856 | MS.gene69373:CDS |
| CTCGATCATGTTCTCACTCC+TGG | 0.302582 | 3.3:-93493529 | MS.gene69373:CDS |
| TCATATAGCCATGAACTTAC+TGG | 0.313557 | 3.3:-93492204 | MS.gene69373:CDS |
| GAGCTTTACGAGCAGCTTGC+AGG | 0.339070 | 3.3:+93491512 | None:intergenic |
| CTGGAGATCTGGCTGAAATT+CGG | 0.352735 | 3.3:-93492185 | MS.gene69373:CDS |
| CCAGATCTCCAGTAAGTTCA+TGG | 0.361028 | 3.3:+93492196 | None:intergenic |
| CGAAAACCCCGAGCTGCAAC+TGG | 0.373967 | 3.3:+93491490 | None:intergenic |
| GAAAATTCGGACTATTCAAT+TGG | 0.381260 | 3.3:-93491560 | MS.gene69373:CDS |
| TCAGCATCAGCAACAGGATT+TGG | 0.384636 | 3.3:+93489671 | None:intergenic |
| TCTTCTACCTCGGGAAAATT+CGG | 0.396222 | 3.3:-93491573 | MS.gene69373:CDS |
| TAAAGCTCCAGTTGCAGCTC+GGG | 0.397705 | 3.3:-93491497 | MS.gene69373:CDS |
| TTCTTACGCTGCAAAGTAGA+TGG | 0.406026 | 3.3:+93493757 | None:intergenic |
| ATCATAGTGCGTTTACTGTT+GGG | 0.406603 | 3.3:-93491445 | MS.gene69373:CDS |
| CACTCTTCGCCATGATGAGT+TGG | 0.420792 | 3.3:-93492021 | MS.gene69373:CDS |
| ATCCTCCTCTGCAATATGTT+TGG | 0.422847 | 3.3:+93489391 | None:intergenic |
| GTTCTTCAGCTAGTGTTGCT+TGG | 0.427729 | 3.3:-93492287 | MS.gene69373:CDS |
| ACTTCTCTGCCTGGTCATAT+AGG | 0.427888 | 3.3:+93491872 | None:intergenic |
| ATTGTGATTCATAGATTTGA+AGG | 0.432257 | 3.3:-93493671 | MS.gene69373:intron |
| TGTCGTTATCTCTTCTACCT+CGG | 0.432513 | 3.3:-93491583 | MS.gene69373:CDS |
| GTCGTTATCTCTTCTACCTC+GGG | 0.434794 | 3.3:-93491582 | MS.gene69373:CDS |
| CCATGAACTTACTGGAGATC+TGG | 0.437963 | 3.3:-93492196 | MS.gene69373:CDS |
| TAACAGTAAATTTCTAGCTC+AGG | 0.444215 | 3.3:+93492454 | None:intergenic |
| AAATGGGTGGATGGTGTCTA+AGG | 0.451020 | 3.3:-93489591 | MS.gene69373:CDS |
| TTGACCTCAACTTCTCTGCC+TGG | 0.452207 | 3.3:+93491863 | None:intergenic |
| TCGCCATGATGAGTTGGGTC+AGG | 0.453949 | 3.3:-93492015 | MS.gene69373:intron |
| ATGCTCTCAGCATCAGCAAC+AGG | 0.456927 | 3.3:+93489665 | None:intergenic |
| TATCATAGTGCGTTTACTGT+TGG | 0.459477 | 3.3:-93491446 | MS.gene69373:CDS |
| TGGATGGTGTCTAAGGAAAC+AGG | 0.461685 | 3.3:-93489584 | MS.gene69373:CDS |
| ACTAGCTGAAGAACAAGCTT+TGG | 0.471713 | 3.3:+93492296 | None:intergenic |
| AGTGTTTAGCTGTAGGGGTA+GGG | 0.475084 | 3.3:+93492482 | None:intergenic |
| GTGTTTAGCTGTAGGGGTAG+GGG | 0.484533 | 3.3:+93492483 | None:intergenic |
| TGCGAAGCAGCAAATTAAGA+AGG | 0.487151 | 3.3:+93491911 | None:intergenic |
| GCAACAAGTGTTTAGCTGTA+GGG | 0.489547 | 3.3:+93492476 | None:intergenic |
| AACTTCCTTCGAGTAAGAAC+CGG | 0.493423 | 3.3:+93493627 | None:intergenic |
| GCTACATTGGATCATGCAAA+TGG | 0.497010 | 3.3:-93489608 | MS.gene69373:CDS |
| CTGTCGATGTTATTGCATCT+AGG | 0.500017 | 3.3:-93492242 | MS.gene69373:CDS |
| AGATGGAACTTGTGGAGAAA+CGG | 0.500179 | 3.3:+93493774 | None:intergenic |
| CTCCACGCATGAGCCTCAGC+TGG | 0.501442 | 3.3:-93489552 | MS.gene69373:CDS |
| GTCTCCGACATAATGTCATC+AGG | 0.501605 | 3.3:-93489772 | MS.gene69373:CDS |
| ACTCTTCGCCATGATGAGTT+GGG | 0.503587 | 3.3:-93492020 | MS.gene69373:CDS |
| ACAACAGCAAGAGCAGGAAC+TGG | 0.505747 | 3.3:-93489414 | MS.gene69373:CDS |
| GAATTCCAGGCTGTCCGCAT+TGG | 0.508181 | 3.3:-93489875 | MS.gene69373:intron |
| GTGTCGAAGGCTATTCGTGA+TGG | 0.511320 | 3.3:-93489641 | MS.gene69373:CDS |
| ACATTTGTAAGCTCAAAGTA+AGG | 0.517576 | 3.3:+93491367 | None:intergenic |
| ATGAGTTCCGTCTGCACTGA+AGG | 0.520485 | 3.3:+93489808 | None:intergenic |
| GTAAAGCTCCAGTTGCAGCT+CGG | 0.520793 | 3.3:-93491498 | MS.gene69373:CDS |
| TGTCGAAGGCTATTCGTGAT+GGG | 0.522093 | 3.3:-93489640 | MS.gene69373:CDS |
| GTAAGAACCGGTCTCAATAA+CGG | 0.524017 | 3.3:+93493639 | None:intergenic |
| AGAGAGACAACAGCAAGAGC+AGG | 0.524456 | 3.3:-93489420 | MS.gene69373:CDS |
| GAAACCTACTTGCATTGCAT+CGG | 0.524818 | 3.3:-93492049 | MS.gene69373:CDS |
| GGAGGATGATCATGAGATGG+AGG | 0.525489 | 3.3:-93492533 | MS.gene69373:CDS |
| AAGTGTTTAGCTGTAGGGGT+AGG | 0.526202 | 3.3:+93492481 | None:intergenic |
| AGCTAGTGAGATGCGAGAAT+AGG | 0.527722 | 3.3:+93489724 | None:intergenic |
| ATTGTGCATGTTAAGACAGA+AGG | 0.528644 | 3.3:+93489511 | None:intergenic |
| TGAAGCACATTCAAACCAGC+AGG | 0.534748 | 3.3:-93491827 | MS.gene69373:intron |
| CGAACTGTCTTTATGCAGAA+AGG | 0.537836 | 3.3:-93491409 | MS.gene69373:CDS |
| TGTAGGGGTAGGGGTTTGAA+TGG | 0.543905 | 3.3:+93492492 | None:intergenic |
| TTCGAATTCAATGTAACAAG+TGG | 0.544110 | 3.3:-93491471 | MS.gene69373:CDS |
| TGCATAAAGACAGTTCGCTC+AGG | 0.545859 | 3.3:+93491415 | None:intergenic |
| CGACATAATGTCATCAGGAC+TGG | 0.551358 | 3.3:-93489767 | MS.gene69373:CDS |
| GGCAGAGAAGTTGAGGTCAA+AGG | 0.552276 | 3.3:-93491860 | MS.gene69373:CDS |
| GGCAACAAGTGTTTAGCTGT+AGG | 0.555242 | 3.3:+93492475 | None:intergenic |
| TGTCTTTATGCAGAAAGGAA+TGG | 0.555289 | 3.3:-93491404 | MS.gene69373:CDS |
| AAACCTGACCCAACTCATCA+TGG | 0.555876 | 3.3:+93492012 | None:intergenic |
| TTAGCATGAGGTTCAGAACC+AGG | 0.559671 | 3.3:+93493511 | None:intergenic |
| GCGAAGCAGCAAATTAAGAA+GGG | 0.562737 | 3.3:+93491912 | None:intergenic |
| TGCTGAGAGCATTGTGTCGA+AGG | 0.568158 | 3.3:-93489654 | MS.gene69373:CDS |
| GGATGATCATGAGATGGAGG+TGG | 0.570304 | 3.3:-93492530 | MS.gene69373:CDS |
| TCGAATTCAATGTAACAAGT+GGG | 0.570948 | 3.3:-93491470 | MS.gene69373:CDS |
| ATGACCAGGCAGAGAAGTTG+AGG | 0.578368 | 3.3:-93491867 | MS.gene69373:CDS |
| ATAGGAGGATGATCATGAGA+TGG | 0.579908 | 3.3:-93492536 | MS.gene69373:intron |
| CAACAAGTGTTTAGCTGTAG+GGG | 0.588492 | 3.3:+93492477 | None:intergenic |
| ATAGCGTCCGTTATTGAGAC+CGG | 0.589430 | 3.3:-93493646 | MS.gene69373:CDS |
| GGCCAAACATATTGCAGAGG+AGG | 0.589837 | 3.3:-93489393 | MS.gene69373:CDS |
| CAACTCATCATGGCGAAGAG+TGG | 0.590059 | 3.3:+93492022 | None:intergenic |
| GCAACCACCTTCAGTGCAGA+CGG | 0.594746 | 3.3:-93489815 | MS.gene69373:CDS |
| TGGGGCAATTGATGCTACAT+TGG | 0.595169 | 3.3:-93489621 | MS.gene69373:CDS |
| CTACATTGGATCATGCAAAT+GGG | 0.597867 | 3.3:-93489607 | MS.gene69373:CDS |
| CAATCCGATGCAATGCAAGT+AGG | 0.600803 | 3.3:+93492045 | None:intergenic |
| AAAGCTCCAGTTGCAGCTCG+GGG | 0.611705 | 3.3:-93491496 | MS.gene69373:CDS |
| TACGCAGACAATTTAGCATG+AGG | 0.613498 | 3.3:+93493499 | None:intergenic |
| AGCCAGCTGAGGCTCATGCG+TGG | 0.615404 | 3.3:+93489550 | None:intergenic |
| GGTTTGAATGGAAGATGTTG+TGG | 0.620968 | 3.3:+93492504 | None:intergenic |
| GGATCATGCAAATGGGTGGA+TGG | 0.621270 | 3.3:-93489600 | MS.gene69373:CDS |
| TTTGAATGTGCTTCAAATCG+TGG | 0.621618 | 3.3:+93491835 | None:intergenic |
| TGAGACCGGTTCTTACTCGA+AGG | 0.622392 | 3.3:-93493632 | MS.gene69373:CDS |
| ATTGTCTGCGTATCTTCCCA+AGG | 0.623168 | 3.3:-93493488 | MS.gene69373:intron |
| GGAGATCTGGCTGAAATTCG+GGG | 0.623695 | 3.3:-93492183 | MS.gene69373:CDS |
| TGCAAAGTAGATGGAACTTG+TGG | 0.628606 | 3.3:+93493766 | None:intergenic |
| CGAGAATTGAAAGCCAGCTG+AGG | 0.642823 | 3.3:+93489539 | None:intergenic |
| GTCGAAGGCTATTCGTGATG+GGG | 0.643333 | 3.3:-93489639 | MS.gene69373:CDS |
| CAGTCCTGATGACATTATGT+CGG | 0.646136 | 3.3:+93489768 | None:intergenic |
| TCACTACAACCTATATGACC+AGG | 0.647246 | 3.3:-93491881 | MS.gene69373:CDS |
| TGTGGAGAAACGGAATTCGA+AGG | 0.647707 | 3.3:+93493784 | None:intergenic |
| TTCGTCTTACAATTGCATTG+AGG | 0.658485 | 3.3:-93493585 | MS.gene69373:CDS |
| GAGATCTGGCTGAAATTCGG+GGG | 0.660656 | 3.3:-93492182 | MS.gene69373:intron |
| CATTGGATCATGCAAATGGG+TGG | 0.661664 | 3.3:-93489604 | MS.gene69373:CDS |
| AGTTCCGTCTGCACTGAAGG+TGG | 0.692083 | 3.3:+93489811 | None:intergenic |
| ACTGGCCAAACATATTGCAG+AGG | 0.692977 | 3.3:-93489396 | MS.gene69373:CDS |
| ACAGCTCCAAATCTCCAATG+CGG | 0.755080 | 3.3:+93489861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATTATAGATTCAAT+TGG | + | chr3.3:93493057-93493076 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTGTACTTTT+TGG | - | chr3.3:93491500-93491519 | MS.gene69373:CDS | 10.0% |
| !!! | CTTTTTTAATAAAGAAAAAT+TGG | + | chr3.3:93492318-93492337 | None:intergenic | 10.0% |
| !! | AATTCTTAATCTAAATTACT+AGG | - | chr3.3:93490429-93490448 | MS.gene69373:intron | 15.0% |
| !! | ATATATTATTATGACAAACA+AGG | + | chr3.3:93491875-93491894 | None:intergenic | 15.0% |
| !! | ATTAAAAAAGTCAAAACAAA+GGG | - | chr3.3:93492328-93492347 | MS.gene69373:intron | 15.0% |
| !! | GTAATTTAGATTAAGAATTA+AGG | + | chr3.3:93490428-93490447 | None:intergenic | 15.0% |
| !! | TAATTATTAATGTTATCTCA+AGG | - | chr3.3:93493067-93493086 | MS.gene69373:intron | 15.0% |
| !! | TATTAAAAAAGTCAAAACAA+AGG | - | chr3.3:93492327-93492346 | MS.gene69373:intron | 15.0% |
| !! | TCTATATAATCAATAAATCA+AGG | - | chr3.3:93491056-93491075 | MS.gene69373:intron | 15.0% |
| !!! | AAATGCATAAAATATTCTTT+TGG | + | chr3.3:93493154-93493173 | None:intergenic | 15.0% |
| !!! | TGTCTGATTTTTTATATTTT+AGG | - | chr3.3:93490877-93490896 | MS.gene69373:intron | 15.0% |
| !!! | TTTTTTTTGTTGGTTATTTA+GGG | - | chr3.3:93489861-93489880 | MS.gene69373:CDS | 15.0% |
| !! | ATATAATCAATAAATCAAGG+AGG | - | chr3.3:93491059-93491078 | MS.gene69373:intron | 20.0% |
| !! | CAAAATTCACAAATTGAAAA+CGG | + | chr3.3:93489503-93489522 | None:intergenic | 20.0% |
| !! | CTAACAAACATCTAATTTAT+AGG | + | chr3.3:93492267-93492286 | None:intergenic | 20.0% |
| !! | GATAAGTTATAACTAAAAAG+TGG | + | chr3.3:93492013-93492032 | None:intergenic | 20.0% |
| !! | GCAACAATTAACTATATTTA+GGG | + | chr3.3:93492901-93492920 | None:intergenic | 20.0% |
| !! | GTAGTTTCAATTAAGAATTA+GGG | + | chr3.3:93490040-93490059 | None:intergenic | 20.0% |
| !! | TAAACACTTAAATGATAATC+AGG | - | chr3.3:93490363-93490382 | MS.gene69373:intron | 20.0% |
| !! | TAAACTCTTAATCTCTTTAA+TGG | + | chr3.3:93492743-93492762 | None:intergenic | 20.0% |
| !! | TAACTTAGATTTAGCATTTA+GGG | - | chr3.3:93489750-93489769 | MS.gene69373:CDS | 20.0% |
| !! | TATCTTCATCAGAAAATATT+AGG | - | chr3.3:93490567-93490586 | MS.gene69373:intron | 20.0% |
| !! | TGAGAGATAGAAAATAAATA+AGG | - | chr3.3:93492853-93492872 | MS.gene69373:intron | 20.0% |
| !! | TTAAAAAAGTCAAAACAAAG+GGG | - | chr3.3:93492329-93492348 | MS.gene69373:intron | 20.0% |
| !! | TTAACTTAGATTTAGCATTT+AGG | - | chr3.3:93489749-93489768 | MS.gene69373:CDS | 20.0% |
| !!! | AACTTGTTTAAATCTTTTTG+TGG | - | chr3.3:93491110-93491129 | MS.gene69373:intron | 20.0% |
| !!! | AGAATATTTTATGCATTTGT+TGG | - | chr3.3:93493156-93493175 | MS.gene69373:intron | 20.0% |
| !!! | GAGAAGATTTTTTTATGTTA+GGG | - | chr3.3:93491221-93491240 | MS.gene69373:intron | 20.0% |
| !!! | GAGTACTTTTTGTATATAAA+TGG | - | chr3.3:93492526-93492545 | MS.gene69373:CDS | 20.0% |
| !!! | GATGAATTAGTTTTTTTTGT+TGG | - | chr3.3:93489851-93489870 | MS.gene69373:CDS | 20.0% |
| !!! | GTTTTCTATGATTGTATTTA+GGG | - | chr3.3:93490140-93490159 | MS.gene69373:intron | 20.0% |
| !!! | GTTTTTTTTGTTGGTTATTT+AGG | - | chr3.3:93489860-93489879 | MS.gene69373:CDS | 20.0% |
| !!! | TGTTTTCTATGATTGTATTT+AGG | - | chr3.3:93490139-93490158 | MS.gene69373:intron | 20.0% |
| !!! | TTTTTGAATGTTCTAAATAC+AGG | - | chr3.3:93492699-93492718 | MS.gene69373:intron | 20.0% |
| ! | AAACACTCCTAAAAAATAAG+CGG | + | chr3.3:93492109-93492128 | None:intergenic | 25.0% |
| ! | AAGGAGTAAGAATTAACAAA+AGG | + | chr3.3:93491553-93491572 | None:intergenic | 25.0% |
| ! | AATACTCCATAAAAACTAGT+CGG | + | chr3.3:93491960-93491979 | None:intergenic | 25.0% |
| ! | AATAGTCCTAAACAATAAGT+GGG | - | chr3.3:93492202-93492221 | MS.gene69373:CDS | 25.0% |
| ! | AATTCTTAATTGAAACTACG+AGG | - | chr3.3:93490041-93490060 | MS.gene69373:intron | 25.0% |
| ! | ACAAACATCTAATTTATAGG+TGG | + | chr3.3:93492264-93492283 | None:intergenic | 25.0% |
| ! | ACTACTACTAAAAAAAGAAG+TGG | - | chr3.3:93492042-93492061 | MS.gene69373:CDS | 25.0% |
| ! | AGCAAGTTAAAACTAAAAAG+TGG | + | chr3.3:93492180-93492199 | None:intergenic | 25.0% |
| ! | ATAAGCATTTCATTACATCT+CGG | + | chr3.3:93492607-93492626 | None:intergenic | 25.0% |
| ! | ATTCTTAATTGAAACTACGA+GGG | - | chr3.3:93490042-93490061 | MS.gene69373:intron | 25.0% |
| ! | ATTGTGATTCATAGATTTGA+AGG | - | chr3.3:93489525-93489544 | MS.gene69373:CDS | 25.0% |
| ! | CAAACATCTAATTTATAGGT+GGG | + | chr3.3:93492263-93492282 | None:intergenic | 25.0% |
| ! | CGCAACAATTAACTATATTT+AGG | + | chr3.3:93492902-93492921 | None:intergenic | 25.0% |
| ! | CGTAGTTTCAATTAAGAATT+AGG | + | chr3.3:93490041-93490060 | None:intergenic | 25.0% |
| ! | CTACTACTAAAAAAAGAAGT+GGG | - | chr3.3:93492043-93492062 | MS.gene69373:CDS | 25.0% |
| ! | GAAGAAAGAAAATGGTTTAT+TGG | - | chr3.3:93492921-93492940 | MS.gene69373:intron | 25.0% |
| ! | GATTAAGAATTAAGGATGTT+TGG | + | chr3.3:93490420-93490439 | None:intergenic | 25.0% |
| ! | TAAATCTACCATTGCATTTA+GGG | - | chr3.3:93489829-93489848 | MS.gene69373:CDS | 25.0% |
| ! | TATAGCAAATAACACAAGTA+TGG | + | chr3.3:93493271-93493290 | None:intergenic | 25.0% |
| ! | TGAAAACATAAAAGCAATAC+AGG | + | chr3.3:93490821-93490840 | None:intergenic | 25.0% |
| ! | TGATCAGAAAAAATACAATG+AGG | - | chr3.3:93490789-93490808 | MS.gene69373:intron | 25.0% |
| ! | TTAAATCTACCATTGCATTT+AGG | - | chr3.3:93489828-93489847 | MS.gene69373:CDS | 25.0% |
| !! | ATAAAATATTCTTTTGGCAC+AGG | + | chr3.3:93493148-93493167 | None:intergenic | 25.0% |
| !! | ATTTTCATAACCTATCATAG+AGG | + | chr3.3:93490299-93490318 | None:intergenic | 25.0% |
| !! | ATTTTCTGATGAAGATAGAA+AGG | + | chr3.3:93490564-93490583 | None:intergenic | 25.0% |
| !! | CGTTTTCAATTTGTGAATTT+TGG | - | chr3.3:93489501-93489520 | MS.gene69373:CDS | 25.0% |
| !! | GACTATTTTCATACAGTTTA+TGG | + | chr3.3:93489955-93489974 | None:intergenic | 25.0% |
| !! | TCATTTGTTAATTCTCCATT+TGG | - | chr3.3:93493241-93493260 | MS.gene69373:intron | 25.0% |
| !! | TTTTCTGATGAAGATAGAAA+GGG | + | chr3.3:93490563-93490582 | None:intergenic | 25.0% |
| !!! | AATTTTGTCACTGATTGTAT+AGG | - | chr3.3:93490642-93490661 | MS.gene69373:intron | 25.0% |
| !!! | GGAGAAGATTTTTTTATGTT+AGG | - | chr3.3:93491220-93491239 | MS.gene69373:intron | 25.0% |
| !!! | TACAAAAAGTACTCATCATT+TGG | + | chr3.3:93492520-93492539 | None:intergenic | 25.0% |
| AAAGAAAGATGACAATGTGA+AGG | + | chr3.3:93492438-93492457 | None:intergenic | 30.0% | |
| AACACTCCTAAAAAATAAGC+GGG | + | chr3.3:93492108-93492127 | None:intergenic | 30.0% | |
| AATCAATAAGCTTCATCACA+AGG | + | chr3.3:93491483-93491502 | None:intergenic | 30.0% | |
| ACAAATGTAAGTCCACATTA+TGG | - | chr3.3:93491844-93491863 | MS.gene69373:CDS | 30.0% | |
| ACATTTGTAAGCTCAAAGTA+AGG | + | chr3.3:93491832-93491851 | None:intergenic | 30.0% | |
| ATCAATAAGCTTCATCACAA+GGG | + | chr3.3:93491482-93491501 | None:intergenic | 30.0% | |
| ATTAACACAAGTTTGTACCT+TGG | + | chr3.3:93489728-93489747 | None:intergenic | 30.0% | |
| ATTCCTTCTCAGATAAACTA+TGG | + | chr3.3:93493000-93493019 | None:intergenic | 30.0% | |
| ATTGTTGCGAAGAAAGAAAA+TGG | - | chr3.3:93492913-93492932 | MS.gene69373:intron | 30.0% | |
| CAATAGTCCTAAACAATAAG+TGG | - | chr3.3:93492201-93492220 | MS.gene69373:CDS | 30.0% | |
| GAAAATTCGGACTATTCAAT+TGG | - | chr3.3:93491636-93491655 | MS.gene69373:intron | 30.0% | |
| TAATTCATCCCTAAATGCAA+TGG | + | chr3.3:93489840-93489859 | None:intergenic | 30.0% | |
| TCGAATTCAATGTAACAAGT+GGG | - | chr3.3:93491726-93491745 | MS.gene69373:intron | 30.0% | |
| TTAACACAAGTTTGTACCTT+GGG | + | chr3.3:93489727-93489746 | None:intergenic | 30.0% | |
| TTAGAAACTGTTAACTGAAG+TGG | - | chr3.3:93492128-93492147 | MS.gene69373:intron | 30.0% | |
| TTCGAATTCAATGTAACAAG+TGG | - | chr3.3:93491725-93491744 | MS.gene69373:intron | 30.0% | |
| TTCTTAATTGAAACTACGAG+GGG | - | chr3.3:93490043-93490062 | MS.gene69373:intron | 30.0% | |
| ! | ATGTTTTCAACTATGCAAAC+TGG | - | chr3.3:93490832-93490851 | MS.gene69373:intron | 30.0% |
| ! | CACCTTTTAATGTTATCTCA+AGG | - | chr3.3:93492974-93492993 | MS.gene69373:intron | 30.0% |
| ! | CACTTATTGTTTAGGACTAT+TGG | + | chr3.3:93492203-93492222 | None:intergenic | 30.0% |
| ! | GACTTTTTGACAGATCTTTT+AGG | - | chr3.3:93490249-93490268 | MS.gene69373:intron | 30.0% |
| ! | TCTTTTTCTTTGTGTGTGTT+TGG | + | chr3.3:93493738-93493757 | None:intergenic | 30.0% |
| ! | TGTTAGTTTAGCTTATGTTG+TGG | - | chr3.3:93493299-93493318 | MS.gene69373:intron | 30.0% |
| ! | TTCACTATTTTCTGAGCATT+TGG | + | chr3.3:93492497-93492516 | None:intergenic | 30.0% |
| ! | TTTTCTTCAACAATTGAGCT+AGG | + | chr3.3:93492467-93492486 | None:intergenic | 30.0% |
| !! | TAACAGTAAATTTCTAGCTC+AGG | + | chr3.3:93490745-93490764 | None:intergenic | 30.0% |
| !!! | GGTTCTATTTTTTCAGTCTT+TGG | - | chr3.3:93493177-93493196 | MS.gene69373:intron | 30.0% |
| !!! | TTCTCTTCCTTTGTTTTTGA+CGG | - | chr3.3:93490593-93490612 | MS.gene69373:intron | 30.0% |
| !!! | TTTACACCCGCTTATTTTTT+AGG | - | chr3.3:93492099-93492118 | MS.gene69373:intron | 30.0% |
| AAAGTCACAAGCAGTAAATG+GGG | + | chr3.3:93490482-93490501 | None:intergenic | 35.0% | |
| AACAAGGTTGAACCATAATG+TGG | + | chr3.3:93491859-93491878 | None:intergenic | 35.0% | |
| AACCTATCATAGAGGACTTA+TGG | + | chr3.3:93490291-93490310 | None:intergenic | 35.0% | |
| AAGTGTTTATGTCAGGAGAT+AGG | + | chr3.3:93490225-93490244 | None:intergenic | 35.0% | |
| ACAAAGTCACAAGCAGTAAA+TGG | + | chr3.3:93490484-93490503 | None:intergenic | 35.0% | |
| ACACTTGTGGAAACAACTTA+AGG | - | chr3.3:93489924-93489943 | MS.gene69373:intron | 35.0% | |
| ATAAAAACTAGTCGGTGTAG+TGG | + | chr3.3:93491952-93491971 | None:intergenic | 35.0% | |
| ATCATAGTGCGTTTACTGTT+GGG | - | chr3.3:93491751-93491770 | MS.gene69373:intron | 35.0% | |
| ATGAAGATAGAAAGGGAAAG+AGG | + | chr3.3:93490556-93490575 | None:intergenic | 35.0% | |
| ATTGTGCATGTTAAGACAGA+AGG | + | chr3.3:93493688-93493707 | None:intergenic | 35.0% | |
| CAAAGTCACAAGCAGTAAAT+GGG | + | chr3.3:93490483-93490502 | None:intergenic | 35.0% | |
| CAACCTTTCTTGCACAATTT+AGG | - | chr3.3:93493105-93493124 | MS.gene69373:intron | 35.0% | |
| CACAAGTATGGATATCCAAA+TGG | + | chr3.3:93493259-93493278 | None:intergenic | 35.0% | |
| CTACATTGGATCATGCAAAT+GGG | - | chr3.3:93493589-93493608 | MS.gene69373:CDS | 35.0% | |
| CTATTTCCCGTCAAAAACAA+AGG | + | chr3.3:93490603-93490622 | None:intergenic | 35.0% | |
| CTGATGTTGCTAAAAAGTTG+AGG | - | chr3.3:93493493-93493512 | MS.gene69373:CDS | 35.0% | |
| CTTACCTGTTGATGTATTTC+AGG | - | chr3.3:93491258-93491277 | MS.gene69373:intron | 35.0% | |
| GGCAAATAATTGAATGCTCA+TGG | - | chr3.3:93490853-93490872 | MS.gene69373:intron | 35.0% | |
| GGCCTTGAGATAACATTAAA+AGG | + | chr3.3:93492979-93492998 | None:intergenic | 35.0% | |
| GGTTTATTGGTCCATGTAAA+AGG | - | chr3.3:93492934-93492953 | MS.gene69373:intron | 35.0% | |
| GTATTCTAGCAAATGCCTAT+GGG | - | chr3.3:93492067-93492086 | MS.gene69373:intron | 35.0% | |
| GTTATTTAGGGATGTTTGGA+TGG | - | chr3.3:93489873-93489892 | MS.gene69373:intron | 35.0% | |
| GTTGGTTATTTAGGGATGTT+TGG | - | chr3.3:93489869-93489888 | MS.gene69373:CDS | 35.0% | |
| GTTTCCTGAAATACATCAAC+AGG | + | chr3.3:93491265-93491284 | None:intergenic | 35.0% | |
| TATCATAGTGCGTTTACTGT+TGG | - | chr3.3:93491750-93491769 | MS.gene69373:intron | 35.0% | |
| TCAGAAAAAGTAGTACAAGC+AGG | + | chr3.3:93490768-93490787 | None:intergenic | 35.0% | |
| TCAGGTTTGTGTTCTACTTA+TGG | - | chr3.3:93491199-93491218 | MS.gene69373:intron | 35.0% | |
| TCATATAGCCATGAACTTAC+TGG | - | chr3.3:93490992-93491011 | MS.gene69373:intron | 35.0% | |
| TGAAGATAGAAAGGGAAAGA+GGG | + | chr3.3:93490555-93490574 | None:intergenic | 35.0% | |
| TGAGATGTGAAATCGATAGA+CGG | + | chr3.3:93489468-93489487 | None:intergenic | 35.0% | |
| TGTAAATTAGTAGCTCCCAT+AGG | + | chr3.3:93492085-93492104 | None:intergenic | 35.0% | |
| TGTATTCTAGCAAATGCCTA+TGG | - | chr3.3:93492066-93492085 | MS.gene69373:intron | 35.0% | |
| TGTCTTTATGCAGAAAGGAA+TGG | - | chr3.3:93491792-93491811 | MS.gene69373:intron | 35.0% | |
| TGTTGCTAAAAAGTTGAGGT+TGG | - | chr3.3:93493497-93493516 | MS.gene69373:CDS | 35.0% | |
| TTCCATAAGTCCTCTATGAT+AGG | - | chr3.3:93490286-93490305 | MS.gene69373:intron | 35.0% | |
| TTCGTCTTACAATTGCATTG+AGG | - | chr3.3:93489611-93489630 | MS.gene69373:CDS | 35.0% | |
| TTTGAATGTGCTTCAAATCG+TGG | + | chr3.3:93491364-93491383 | None:intergenic | 35.0% | |
| ! | AAATATTCTTTTGGCACAGG+TGG | + | chr3.3:93493145-93493164 | None:intergenic | 35.0% |
| ! | ACGAATTTCTTTTGTGCTCA+TGG | + | chr3.3:93491411-93491430 | None:intergenic | 35.0% |
| ! | CTTTCTTGTTCTGCTGTTTA+GGG | - | chr3.3:93490185-93490204 | MS.gene69373:intron | 35.0% |
| ! | GAATGTTCTAAATACAGGTG+TGG | - | chr3.3:93492704-93492723 | MS.gene69373:intron | 35.0% |
| ! | TACTTGCAACTTTTGCAACA+TGG | - | chr3.3:93490098-93490117 | MS.gene69373:intron | 35.0% |
| ! | TCTTTCTTGTTCTGCTGTTT+AGG | - | chr3.3:93490184-93490203 | MS.gene69373:intron | 35.0% |
| ! | TTTGTCACTGATTGTATAGG+AGG | - | chr3.3:93490645-93490664 | MS.gene69373:intron | 35.0% |
| ! | TTTTAGCAACATGCACCTTA+GGG | - | chr3.3:93491978-93491997 | MS.gene69373:intron | 35.0% |
| ! | TTTTCTTCATCCATGTGTTG+TGG | + | chr3.3:93492556-93492575 | None:intergenic | 35.0% |
| ! | TTTTCTTTGTGTGTGTTTGG+TGG | + | chr3.3:93493735-93493754 | None:intergenic | 35.0% |
| ! | TTTTTGACGGGAAATAGCAA+TGG | - | chr3.3:93490606-93490625 | MS.gene69373:intron | 35.0% |
| !! | ATTTTAGCAACATGCACCTT+AGG | - | chr3.3:93491977-93491996 | MS.gene69373:intron | 35.0% |
| !! | GAGCACTGGAATAAAAAGTA+TGG | + | chr3.3:93491441-93491460 | None:intergenic | 35.0% |
| !!! | ACTACACCGACTAGTTTTTA+TGG | - | chr3.3:93491951-93491970 | MS.gene69373:intron | 35.0% |
| !!! | GGAAAAAGGTGCTTTTTTCT+GGG | + | chr3.3:93492794-93492813 | None:intergenic | 35.0% |
| !!! | TCTCTTCCTTTGTTTTTGAC+GGG | - | chr3.3:93490594-93490613 | MS.gene69373:intron | 35.0% |
| AACTTCCTTCGAGTAAGAAC+CGG | + | chr3.3:93489572-93489591 | None:intergenic | 40.0% | |
| AAGTGGTTAAATGCACCCTA+AGG | + | chr3.3:93491996-93492015 | None:intergenic | 40.0% | |
| AAGTGGTTAAATGCACCTCA+AGG | - | chr3.3:93492145-93492164 | MS.gene69373:intron | 40.0% | |
| ACTAGCTGAAGAACAAGCTT+TGG | + | chr3.3:93490903-93490922 | None:intergenic | 40.0% | |
| ACTTATTTGAGCTTGCCTAC+TGG | - | chr3.3:93489896-93489915 | MS.gene69373:intron | 40.0% | |
| AGAACAAGTGTGCACATGAA+AGG | + | chr3.3:93491572-93491591 | None:intergenic | 40.0% | |
| AGATGGAACTTGTGGAGAAA+CGG | + | chr3.3:93489425-93489444 | None:intergenic | 40.0% | |
| AGCTTATGTTGTGGAATTCC+AGG | - | chr3.3:93493308-93493327 | MS.gene69373:intron | 40.0% | |
| AGGCCATAGTTTATCTGAGA+AGG | - | chr3.3:93492994-93493013 | MS.gene69373:intron | 40.0% | |
| ATAGGAGGATGATCATGAGA+TGG | - | chr3.3:93490660-93490679 | MS.gene69373:intron | 40.0% | |
| ATCCTCCTCTGCAATATGTT+TGG | + | chr3.3:93493808-93493827 | None:intergenic | 40.0% | |
| ATCTTGTCCAACTAACGTGT+TGG | + | chr3.3:93492293-93492312 | None:intergenic | 40.0% | |
| CAACAAGTGTTTAGCTGTAG+GGG | + | chr3.3:93490722-93490741 | None:intergenic | 40.0% | |
| CAGTCCTGATGACATTATGT+CGG | + | chr3.3:93493431-93493450 | None:intergenic | 40.0% | |
| CGAACTGTCTTTATGCAGAA+AGG | - | chr3.3:93491787-93491806 | MS.gene69373:intron | 40.0% | |
| CGATTTCCCAGTGGAAAAAA+CGG | + | chr3.3:93492820-93492839 | None:intergenic | 40.0% | |
| CGTACACCCACTTATTGTTT+AGG | + | chr3.3:93492211-93492230 | None:intergenic | 40.0% | |
| CTAGTTTAACGATTTCCCAG+TGG | + | chr3.3:93492829-93492848 | None:intergenic | 40.0% | |
| CTGTCGATGTTATTGCATCT+AGG | - | chr3.3:93490954-93490973 | MS.gene69373:intron | 40.0% | |
| CTTCAACAATTGAGCTAGGA+AGG | + | chr3.3:93492463-93492482 | None:intergenic | 40.0% | |
| GAAACCTACTTGCATTGCAT+CGG | - | chr3.3:93491147-93491166 | MS.gene69373:intron | 40.0% | |
| GAAAGATGACAATGTGAAGG+AGG | + | chr3.3:93492435-93492454 | None:intergenic | 40.0% | |
| GAGATAACGACAGAACTGAA+AGG | + | chr3.3:93491605-93491624 | None:intergenic | 40.0% | |
| GATAGAACTAACATACCTGC+TGG | + | chr3.3:93491387-93491406 | None:intergenic | 40.0% | |
| GCAACAAGTGTTTAGCTGTA+GGG | + | chr3.3:93490723-93490742 | None:intergenic | 40.0% | |
| GCGAAGCAGCAAATTAAGAA+GGG | + | chr3.3:93491287-93491306 | None:intergenic | 40.0% | |
| GCTACATTGGATCATGCAAA+TGG | - | chr3.3:93493588-93493607 | MS.gene69373:CDS | 40.0% | |
| GGAAAAAACGGAAGGGAAAA+AGG | + | chr3.3:93492808-93492827 | None:intergenic | 40.0% | |
| GGTTTGAATGGAAGATGTTG+TGG | + | chr3.3:93490695-93490714 | None:intergenic | 40.0% | |
| GTAAGAACCGGTCTCAATAA+CGG | + | chr3.3:93489560-93489579 | None:intergenic | 40.0% | |
| GTTGGAGGAAGATGAAACAA+CGG | + | chr3.3:93492409-93492428 | None:intergenic | 40.0% | |
| TACGCAGACAATTTAGCATG+AGG | + | chr3.3:93489700-93489719 | None:intergenic | 40.0% | |
| TCACTACAACCTATATGACC+AGG | - | chr3.3:93491315-93491334 | MS.gene69373:intron | 40.0% | |
| TCTTCTACCTCGGGAAAATT+CGG | - | chr3.3:93491623-93491642 | MS.gene69373:intron | 40.0% | |
| TCTTGTCCAACTAACGTGTT+GGG | + | chr3.3:93492292-93492311 | None:intergenic | 40.0% | |
| TGCAAAGTAGATGGAACTTG+TGG | + | chr3.3:93489433-93489452 | None:intergenic | 40.0% | |
| TGCGAAGCAGCAAATTAAGA+AGG | + | chr3.3:93491288-93491307 | None:intergenic | 40.0% | |
| TGTCGTTATCTCTTCTACCT+CGG | - | chr3.3:93491613-93491632 | MS.gene69373:intron | 40.0% | |
| TTCTTACGCTGCAAAGTAGA+TGG | + | chr3.3:93489442-93489461 | None:intergenic | 40.0% | |
| TTGGAGGAAGATGAAACAAC+GGG | + | chr3.3:93492408-93492427 | None:intergenic | 40.0% | |
| ! | AGTACCCAACACCTTTTACA+TGG | + | chr3.3:93492948-93492967 | None:intergenic | 40.0% |
| ! | TTGGAGATTTGGAGCTGTTT+AGG | - | chr3.3:93493340-93493359 | MS.gene69373:intron | 40.0% |
| ! | TTGGTCCATGTAAAAGGTGT+TGG | - | chr3.3:93492940-93492959 | MS.gene69373:intron | 40.0% |
| !! | TGGTCCATGTAAAAGGTGTT+GGG | - | chr3.3:93492941-93492960 | MS.gene69373:intron | 40.0% |
| !!! | GGGAAAAAGGTGCTTTTTTC+TGG | + | chr3.3:93492795-93492814 | None:intergenic | 40.0% |
| AAACCTGACCCAACTCATCA+TGG | + | chr3.3:93491187-93491206 | None:intergenic | 45.0% | |
| AAAGGTTGACCACTAGGCTA+TGG | + | chr3.3:93493093-93493112 | None:intergenic | 45.0% | |
| AAATGGCACACCACAACACA+TGG | - | chr3.3:93492543-93492562 | MS.gene69373:intron | 45.0% | |
| AAATGGGTGGATGGTGTCTA+AGG | - | chr3.3:93493605-93493624 | MS.gene69373:CDS | 45.0% | |
| AAGTGTTTAGCTGTAGGGGT+AGG | + | chr3.3:93490718-93490737 | None:intergenic | 45.0% | |
| ACAATGTGAAGGAGGATGGT+TGG | + | chr3.3:93492427-93492446 | None:intergenic | 45.0% | |
| ACAGCTCCAAATCTCCAATG+CGG | + | chr3.3:93493338-93493357 | None:intergenic | 45.0% | |
| ACTAGTCGGTGTAGTGGTTA+AGG | + | chr3.3:93491946-93491965 | None:intergenic | 45.0% | |
| ACTCTTCGCCATGATGAGTT+GGG | - | chr3.3:93491176-93491195 | MS.gene69373:intron | 45.0% | |
| ACTGGCCAAACATATTGCAG+AGG | - | chr3.3:93493800-93493819 | MS.gene69373:CDS | 45.0% | |
| ACTTCTCTGCCTGGTCATAT+AGG | + | chr3.3:93491327-93491346 | None:intergenic | 45.0% | |
| AGCTAGTGAGATGCGAGAAT+AGG | + | chr3.3:93493475-93493494 | None:intergenic | 45.0% | |
| AGTGTTTAGCTGTAGGGGTA+GGG | + | chr3.3:93490717-93490736 | None:intergenic | 45.0% | |
| ATAGCGTCCGTTATTGAGAC+CGG | - | chr3.3:93489550-93489569 | MS.gene69373:CDS | 45.0% | |
| ATCTCGGTCTATCTACAGAC+TGG | + | chr3.3:93492591-93492610 | None:intergenic | 45.0% | |
| ATTGTCTGCGTATCTTCCCA+AGG | - | chr3.3:93489708-93489727 | MS.gene69373:CDS | 45.0% | |
| CAATCCGATGCAATGCAAGT+AGG | + | chr3.3:93491154-93491173 | None:intergenic | 45.0% | |
| CACAGGTGGTAACTAACTCA+GGG | + | chr3.3:93493131-93493150 | None:intergenic | 45.0% | |
| CATTGGATCATGCAAATGGG+TGG | - | chr3.3:93493592-93493611 | MS.gene69373:CDS | 45.0% | |
| CCACAAGTGTTTATGCCAGT+AGG | + | chr3.3:93489914-93489933 | None:intergenic | 45.0% | |
| CCAGATCTCCAGTAAGTTCA+TGG | + | chr3.3:93491003-93491022 | None:intergenic | 45.0% | |
| CCATGAACTTACTGGAGATC+TGG | - | chr3.3:93491000-93491019 | MS.gene69373:intron | 45.0% | |
| CCTACTGGCATAAACACTTG+TGG | - | chr3.3:93489911-93489930 | MS.gene69373:intron | 45.0% | |
| CGACATAATGTCATCAGGAC+TGG | - | chr3.3:93493429-93493448 | MS.gene69373:intron | 45.0% | |
| CTAGTCGGTGTAGTGGTTAA+GGG | + | chr3.3:93491945-93491964 | None:intergenic | 45.0% | |
| CTGGAGATCTGGCTGAAATT+CGG | - | chr3.3:93491011-93491030 | MS.gene69373:intron | 45.0% | |
| GATGACAATGTGAAGGAGGA+TGG | + | chr3.3:93492431-93492450 | None:intergenic | 45.0% | |
| GGCAACAAGTGTTTAGCTGT+AGG | + | chr3.3:93490724-93490743 | None:intergenic | 45.0% | |
| GGGCCTAAATTGTGCAAGAA+AGG | + | chr3.3:93493111-93493130 | None:intergenic | 45.0% | |
| GTCGTTATCTCTTCTACCTC+GGG | - | chr3.3:93491614-93491633 | MS.gene69373:intron | 45.0% | |
| GTCTCCGACATAATGTCATC+AGG | - | chr3.3:93493424-93493443 | MS.gene69373:intron | 45.0% | |
| GTCTCGCAAGTGTTTATGTC+AGG | + | chr3.3:93490232-93490251 | None:intergenic | 45.0% | |
| GTGTAGTGGTTAAGGGAGAT+AGG | + | chr3.3:93491938-93491957 | None:intergenic | 45.0% | |
| TCAGCATCAGCAACAGGATT+TGG | + | chr3.3:93493528-93493547 | None:intergenic | 45.0% | |
| TCCCAGTGGAAAAAACGGAA+GGG | + | chr3.3:93492815-93492834 | None:intergenic | 45.0% | |
| TGAAGCACATTCAAACCAGC+AGG | - | chr3.3:93491369-93491388 | MS.gene69373:CDS | 45.0% | |
| TGCAAGAAAGGTTGACCACT+AGG | + | chr3.3:93493099-93493118 | None:intergenic | 45.0% | |
| TGCATAAAGACAGTTCGCTC+AGG | + | chr3.3:93491784-93491803 | None:intergenic | 45.0% | |
| TGGAGATCTGGCTGAAATTC+GGG | - | chr3.3:93491012-93491031 | MS.gene69373:intron | 45.0% | |
| TGGATGGTGTCTAAGGAAAC+AGG | - | chr3.3:93493612-93493631 | MS.gene69373:CDS | 45.0% | |
| TGGGGCAATTGATGCTACAT+TGG | - | chr3.3:93493575-93493594 | MS.gene69373:CDS | 45.0% | |
| TGGGTGTACGTTAGCAAATC+CGG | - | chr3.3:93492221-93492240 | MS.gene69373:CDS | 45.0% | |
| TGTCGAAGGCTATTCGTGAT+GGG | - | chr3.3:93493556-93493575 | MS.gene69373:CDS | 45.0% | |
| TGTGGAGAAACGGAATTCGA+AGG | + | chr3.3:93489415-93489434 | None:intergenic | 45.0% | |
| TTAGCACCCAACACGTTAGT+TGG | - | chr3.3:93492283-93492302 | MS.gene69373:CDS | 45.0% | |
| TTAGCATGAGGTTCAGAACC+AGG | + | chr3.3:93489688-93489707 | None:intergenic | 45.0% | |
| TTCCCAGTGGAAAAAACGGA+AGG | + | chr3.3:93492816-93492835 | None:intergenic | 45.0% | |
| ! | GAATAGTCCGAATTTTCCCG+AGG | + | chr3.3:93491633-93491652 | None:intergenic | 45.0% |
| ! | GTTCTTCAGCTAGTGTTGCT+TGG | - | chr3.3:93490909-93490928 | MS.gene69373:intron | 45.0% |
| !!! | TCCCTTCCGTTTTTTCCACT+GGG | - | chr3.3:93492811-93492830 | MS.gene69373:intron | 45.0% |
| !!! | TTCCCTTCCGTTTTTTCCAC+TGG | - | chr3.3:93492810-93492829 | MS.gene69373:intron | 45.0% |
| !! | AATATATAAGATTTATAAAT+AGG | + | chr3.3:93489782-93489801 | None:intergenic | 5.0% |
| !!! | TTAAATTTTTTATACAAATT+AGG | - | chr3.3:93490014-93490033 | MS.gene69373:intron | 5.0% |
| !!! | TTTTTTAATAAAGAAAAATT+GGG | + | chr3.3:93492317-93492336 | None:intergenic | 5.0% |
| AAGTGGTTGCATACGCCTTG+AGG | + | chr3.3:93492163-93492182 | None:intergenic | 50.0% | |
| ACAACAGCAAGAGCAGGAAC+TGG | - | chr3.3:93493782-93493801 | MS.gene69373:CDS | 50.0% | |
| AGAGAGACAACAGCAAGAGC+AGG | - | chr3.3:93493776-93493795 | MS.gene69373:CDS | 50.0% | |
| ATCTCAAGGCCATAGCCTAG+TGG | - | chr3.3:93493081-93493100 | MS.gene69373:intron | 50.0% | |
| ATGACCAGGCAGAGAAGTTG+AGG | - | chr3.3:93491329-93491348 | MS.gene69373:intron | 50.0% | |
| ATGAGTTCCGTCTGCACTGA+AGG | + | chr3.3:93493391-93493410 | None:intergenic | 50.0% | |
| ATGCTCTCAGCATCAGCAAC+AGG | + | chr3.3:93493534-93493553 | None:intergenic | 50.0% | |
| ATGTGAAGGAGGATGGTTGG+AGG | + | chr3.3:93492424-93492443 | None:intergenic | 50.0% | |
| CAACTCATCATGGCGAAGAG+TGG | + | chr3.3:93491177-93491196 | None:intergenic | 50.0% | |
| CACTCTTCGCCATGATGAGT+TGG | - | chr3.3:93491175-93491194 | MS.gene69373:intron | 50.0% | |
| CGAGAATTGAAAGCCAGCTG+AGG | + | chr3.3:93493660-93493679 | None:intergenic | 50.0% | |
| CTCGATCATGTTCTCACTCC+TGG | - | chr3.3:93489667-93489686 | MS.gene69373:CDS | 50.0% | |
| GAGATCTGGCTGAAATTCGG+GGG | - | chr3.3:93491014-93491033 | MS.gene69373:intron | 50.0% | |
| GCACAGGTGGTAACTAACTC+AGG | + | chr3.3:93493132-93493151 | None:intergenic | 50.0% | |
| GGAGATCTGGCTGAAATTCG+GGG | - | chr3.3:93491013-93491032 | MS.gene69373:intron | 50.0% | |
| GGAGGATGATCATGAGATGG+AGG | - | chr3.3:93490663-93490682 | MS.gene69373:intron | 50.0% | |
| GGATCATGCAAATGGGTGGA+TGG | - | chr3.3:93493596-93493615 | MS.gene69373:CDS | 50.0% | |
| GGATGATCATGAGATGGAGG+TGG | - | chr3.3:93490666-93490685 | MS.gene69373:intron | 50.0% | |
| GGCAGAGAAGTTGAGGTCAA+AGG | - | chr3.3:93491336-93491355 | MS.gene69373:intron | 50.0% | |
| GGCCAAACATATTGCAGAGG+AGG | - | chr3.3:93493803-93493822 | MS.gene69373:CDS | 50.0% | |
| GGGTGTACGTTAGCAAATCC+GGG | - | chr3.3:93492222-93492241 | MS.gene69373:CDS | 50.0% | |
| GGGTGTGCAATAGCATTACC+CGG | + | chr3.3:93492243-93492262 | None:intergenic | 50.0% | |
| GTAAAGCTCCAGTTGCAGCT+CGG | - | chr3.3:93491698-93491717 | MS.gene69373:intron | 50.0% | |
| GTCGAAGGCTATTCGTGATG+GGG | - | chr3.3:93493557-93493576 | MS.gene69373:CDS | 50.0% | |
| GTGTCGAAGGCTATTCGTGA+TGG | - | chr3.3:93493555-93493574 | MS.gene69373:CDS | 50.0% | |
| GTGTTTAGCTGTAGGGGTAG+GGG | + | chr3.3:93490716-93490735 | None:intergenic | 50.0% | |
| TAAAGCTCCAGTTGCAGCTC+GGG | - | chr3.3:93491699-93491718 | MS.gene69373:intron | 50.0% | |
| TATTCCAGTGCTCACAGCTG+TGG | - | chr3.3:93491448-93491467 | MS.gene69373:CDS | 50.0% | |
| TGTAGGGGTAGGGGTTTGAA+TGG | + | chr3.3:93490707-93490726 | None:intergenic | 50.0% | |
| TTGACCTCAACTTCTCTGCC+TGG | + | chr3.3:93491336-93491355 | None:intergenic | 50.0% | |
| ! | TGAGACCGGTTCTTACTCGA+AGG | - | chr3.3:93489564-93489583 | MS.gene69373:CDS | 50.0% |
| !! | TGCTGAGAGCATTGTGTCGA+AGG | - | chr3.3:93493542-93493561 | MS.gene69373:CDS | 50.0% |
| AAAGCTCCAGTTGCAGCTCG+GGG | - | chr3.3:93491700-93491719 | MS.gene69373:intron | 55.0% | |
| AATCTCCAATGCGGACAGCC+TGG | + | chr3.3:93493329-93493348 | None:intergenic | 55.0% | |
| AGTTCCGTCTGCACTGAAGG+TGG | + | chr3.3:93493388-93493407 | None:intergenic | 55.0% | |
| ATCACCACAGCTGTGAGCAC+TGG | + | chr3.3:93491455-93491474 | None:intergenic | 55.0% | |
| GAATTCCAGGCTGTCCGCAT+TGG | - | chr3.3:93493321-93493340 | MS.gene69373:intron | 55.0% | |
| GAGCTTTACGAGCAGCTTGC+AGG | + | chr3.3:93491687-93491706 | None:intergenic | 55.0% | |
| GCAACCACCTTCAGTGCAGA+CGG | - | chr3.3:93493381-93493400 | MS.gene69373:intron | 55.0% | |
| GGCTGTCCGCATTGGAGATT+TGG | - | chr3.3:93493329-93493348 | MS.gene69373:intron | 55.0% | |
| ! | TCGCCATGATGAGTTGGGTC+AGG | - | chr3.3:93491181-93491200 | MS.gene69373:intron | 55.0% |
| CGAAAACCCCGAGCTGCAAC+TGG | + | chr3.3:93491709-93491728 | None:intergenic | 60.0% | |
| AGCCAGCTGAGGCTCATGCG+TGG | + | chr3.3:93493649-93493668 | None:intergenic | 65.0% | |
| CTCCACGCATGAGCCTCAGC+TGG | - | chr3.3:93493644-93493663 | MS.gene69373:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 93489376 | 93493842 | 93489376 | ID=MS.gene69373 |
| chr3.3 | mRNA | 93489376 | 93493842 | 93489376 | ID=MS.gene69373.t1;Parent=MS.gene69373 |
| chr3.3 | exon | 93493764 | 93493842 | 93493764 | ID=MS.gene69373.t1.exon1;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93493764 | 93493842 | 93493764 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93493489 | 93493679 | 93493489 | ID=MS.gene69373.t1.exon2;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93493489 | 93493679 | 93493489 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93492408 | 93492554 | 93492408 | ID=MS.gene69373.t1.exon3;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93492408 | 93492554 | 93492408 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93492183 | 93492319 | 93492183 | ID=MS.gene69373.t1.exon4;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93492183 | 93492319 | 93492183 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93492016 | 93492070 | 93492016 | ID=MS.gene69373.t1.exon5;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93492016 | 93492070 | 93492016 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93491828 | 93491938 | 93491828 | ID=MS.gene69373.t1.exon6;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93491828 | 93491938 | 93491828 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93491369 | 93491608 | 93491369 | ID=MS.gene69373.t1.exon7;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93491369 | 93491608 | 93491369 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| chr3.3 | exon | 93489376 | 93489888 | 93489376 | ID=MS.gene69373.t1.exon8;Parent=MS.gene69373.t1 |
| chr3.3 | CDS | 93489376 | 93489888 | 93489376 | ID=cds.MS.gene69373.t1;Parent=MS.gene69373.t1 |
| Gene Sequence |
| Protein sequence |
