Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003290.t1 | XP_003594504.2 | 96.7 | 390 | 13 | 0 | 1 | 390 | 115 | 504 | 8.50E-177 | 629.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003290.t1 | Q3MKM6 | 51.2 | 391 | 169 | 2 | 1 | 390 | 110 | 479 | 5.5e-108 | 392.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003290.t1 | G7IJV2 | 96.7 | 390 | 13 | 0 | 1 | 390 | 115 | 504 | 6.1e-177 | 629.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003290.t1 | MTR_2g029940 | 98.718 | 390 | 5 | 0 | 1 | 390 | 115 | 504 | 0.0 | 798 |
MS.gene003290.t1 | MTR_8g106790 | 26.180 | 233 | 148 | 4 | 31 | 258 | 59 | 272 | 2.68e-16 | 79.7 |
MS.gene003290.t1 | MTR_1g054300 | 33.607 | 122 | 80 | 1 | 86 | 206 | 360 | 481 | 4.89e-16 | 80.1 |
MS.gene003290.t1 | MTR_4g105700 | 32.178 | 202 | 108 | 7 | 38 | 229 | 63 | 245 | 6.42e-15 | 77.0 |
MS.gene003290.t1 | MTR_2g436510 | 25.114 | 219 | 143 | 3 | 30 | 246 | 207 | 406 | 6.94e-13 | 70.1 |
MS.gene003290.t1 | MTR_5g016370 | 25.431 | 232 | 164 | 5 | 31 | 258 | 243 | 469 | 7.44e-13 | 70.5 |
MS.gene003290.t1 | MTR_1g097140 | 30.588 | 170 | 113 | 4 | 93 | 258 | 77 | 245 | 2.13e-12 | 68.6 |
MS.gene003290.t1 | MTR_1g072140 | 21.795 | 234 | 157 | 5 | 31 | 257 | 65 | 279 | 3.08e-12 | 67.4 |
MS.gene003290.t1 | MTR_7g076230 | 29.375 | 160 | 94 | 3 | 28 | 186 | 404 | 545 | 3.53e-12 | 68.6 |
MS.gene003290.t1 | MTR_4g095058 | 22.018 | 327 | 211 | 7 | 31 | 329 | 226 | 536 | 6.55e-12 | 67.4 |
MS.gene003290.t1 | MTR_4g119620 | 22.747 | 233 | 152 | 6 | 34 | 258 | 77 | 289 | 7.09e-12 | 66.2 |
MS.gene003290.t1 | MTR_4g119620 | 24.891 | 229 | 144 | 7 | 29 | 246 | 21 | 232 | 2.17e-11 | 65.1 |
MS.gene003290.t1 | MTR_4g095058 | 22.018 | 327 | 211 | 7 | 31 | 329 | 224 | 534 | 7.68e-12 | 67.4 |
MS.gene003290.t1 | MTR_4g123597 | 26.404 | 178 | 117 | 4 | 83 | 246 | 516 | 693 | 7.97e-12 | 67.4 |
MS.gene003290.t1 | MTR_4g123597 | 27.848 | 158 | 94 | 4 | 56 | 212 | 85 | 223 | 1.16e-11 | 67.0 |
MS.gene003290.t1 | MTR_4g104380 | 22.944 | 231 | 163 | 5 | 111 | 328 | 245 | 473 | 5.34e-11 | 64.3 |
MS.gene003290.t1 | MTR_3g106080 | 35.000 | 120 | 59 | 2 | 52 | 171 | 520 | 620 | 5.72e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003290.t1 | AT4G05410 | 59.079 | 391 | 147 | 4 | 1 | 390 | 126 | 504 | 5.32e-171 | 487 |
MS.gene003290.t1 | AT4G21130 | 59.335 | 391 | 137 | 2 | 1 | 390 | 110 | 479 | 3.68e-167 | 476 |
MS.gene003290.t1 | AT3G18130 | 24.671 | 304 | 184 | 9 | 31 | 328 | 59 | 323 | 5.18e-17 | 81.6 |
MS.gene003290.t1 | AT1G48630 | 24.342 | 304 | 185 | 9 | 31 | 328 | 59 | 323 | 4.50e-16 | 79.0 |
MS.gene003290.t1 | AT1G48630 | 27.615 | 239 | 145 | 7 | 30 | 257 | 10 | 231 | 3.43e-13 | 70.5 |
MS.gene003290.t1 | AT5G52820 | 32.520 | 123 | 82 | 1 | 86 | 207 | 350 | 472 | 8.67e-16 | 79.3 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 506 | 715 | 3.92e-15 | 77.8 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 527 | 736 | 4.38e-15 | 77.4 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 508 | 717 | 4.53e-15 | 77.4 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 508 | 717 | 4.53e-15 | 77.4 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 508 | 717 | 4.53e-15 | 77.4 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 508 | 717 | 4.53e-15 | 77.4 |
MS.gene003290.t1 | AT2G32700 | 24.286 | 210 | 116 | 4 | 94 | 260 | 508 | 717 | 4.53e-15 | 77.4 |
MS.gene003290.t1 | AT3G21540 | 32.911 | 158 | 86 | 4 | 56 | 212 | 85 | 223 | 1.07e-14 | 76.6 |
MS.gene003290.t1 | AT5G16750 | 32.787 | 183 | 95 | 7 | 38 | 212 | 63 | 225 | 1.43e-14 | 75.9 |
MS.gene003290.t1 | AT1G18080 | 24.786 | 234 | 151 | 4 | 31 | 258 | 59 | 273 | 1.06e-13 | 72.0 |
MS.gene003290.t1 | AT1G18080 | 25.322 | 233 | 151 | 5 | 34 | 257 | 14 | 232 | 6.12e-11 | 63.5 |
MS.gene003290.t1 | AT5G67320 | 26.293 | 232 | 162 | 5 | 31 | 258 | 261 | 487 | 5.50e-13 | 70.9 |
MS.gene003290.t1 | AT2G05720 | 30.625 | 160 | 105 | 4 | 34 | 187 | 105 | 264 | 1.25e-12 | 68.2 |
MS.gene003290.t1 | AT1G61210 | 29.487 | 156 | 89 | 2 | 52 | 206 | 117 | 252 | 3.98e-12 | 68.6 |
MS.gene003290.t1 | AT1G24130 | 27.957 | 186 | 104 | 7 | 32 | 207 | 189 | 354 | 4.05e-12 | 67.8 |
MS.gene003290.t1 | AT4G15900 | 25.114 | 219 | 143 | 3 | 30 | 246 | 213 | 412 | 4.54e-12 | 67.8 |
MS.gene003290.t1 | AT1G61210 | 29.487 | 156 | 89 | 2 | 52 | 206 | 117 | 252 | 5.56e-12 | 68.2 |
MS.gene003290.t1 | AT1G61210 | 29.487 | 156 | 89 | 2 | 52 | 206 | 117 | 252 | 5.97e-12 | 68.2 |
MS.gene003290.t1 | AT1G11160 | 26.108 | 203 | 125 | 4 | 28 | 206 | 9 | 210 | 2.24e-11 | 66.2 |
MS.gene003290.t1 | AT3G49660 | 25.309 | 162 | 107 | 1 | 29 | 190 | 18 | 165 | 2.69e-11 | 64.7 |
MS.gene003290.t1 | AT1G15440 | 28.125 | 160 | 96 | 3 | 28 | 186 | 424 | 565 | 2.92e-11 | 65.9 |
MS.gene003290.t1 | AT1G15440 | 28.125 | 160 | 96 | 3 | 28 | 186 | 384 | 525 | 3.14e-11 | 65.5 |
MS.gene003290.t1 | AT2G43770 | 23.482 | 247 | 147 | 8 | 28 | 257 | 89 | 310 | 3.36e-11 | 64.7 |
MS.gene003290.t1 | AT1G11160 | 26.368 | 201 | 123 | 4 | 30 | 206 | 53 | 252 | 3.51e-11 | 65.5 |
MS.gene003290.t1 | AT1G24530 | 26.506 | 249 | 124 | 11 | 32 | 253 | 192 | 408 | 3.57e-11 | 64.7 |
MS.gene003290.t1 | AT1G11160 | 26.368 | 201 | 123 | 4 | 30 | 206 | 53 | 252 | 3.85e-11 | 65.5 |
MS.gene003290.t1 | AT1G11160 | 26.368 | 201 | 123 | 4 | 30 | 206 | 53 | 252 | 3.89e-11 | 65.5 |
MS.gene003290.t1 | AT5G50230 | 22.318 | 233 | 162 | 7 | 111 | 328 | 240 | 468 | 4.21e-11 | 64.7 |
Find 97 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGTAGTATGCAGTTGTTTA+AGG | 0.158441 | 2.4:-59634794 | MS.gene003290:intron |
TTGATCGTCATATTCATATA+TGG | 0.249177 | 2.4:-59635516 | MS.gene003290:CDS |
TTTATCTGAGGATGATTCTA+AGG | 0.255607 | 2.4:-59635737 | MS.gene003290:CDS |
GGTTGGGTTTGTCAATTCTT+TGG | 0.267712 | 2.4:-59633792 | MS.gene003290:CDS |
ATGAAGCGGTTTAATGTCTT+TGG | 0.274416 | 2.4:+59633938 | None:intergenic |
TGATGGTAGCATTGAGCTTT+GGG | 0.320486 | 2.4:-59634446 | MS.gene003290:CDS |
GATGGTCGCTATTTGGCAAC+TGG | 0.323491 | 2.4:-59635544 | MS.gene003290:CDS |
TGTGTTATTTAGGGTTAAAC+TGG | 0.332866 | 2.4:-59635818 | MS.gene003290:intron |
AAGTTCAGATGGTCGCTATT+TGG | 0.336260 | 2.4:-59635551 | MS.gene003290:CDS |
AACAAAACAACAGCATTCTA+AGG | 0.349174 | 2.4:+59634498 | None:intergenic |
GCCGCATCTGGTGCGGGTAA+TGG | 0.356528 | 2.4:-59633993 | MS.gene003290:CDS |
TAGAGGTCCTGTTTCTTCTC+TGG | 0.361793 | 2.4:-59634983 | MS.gene003290:CDS |
TCAGCAAAATTCCTAGTTGC+TGG | 0.374225 | 2.4:-59633758 | MS.gene003290:CDS |
GCGCACTAGGGAGCATCTTC+AGG | 0.377779 | 2.4:-59635488 | MS.gene003290:intron |
TTGATCGAACGATTAAGATA+TGG | 0.379793 | 2.4:-59634921 | MS.gene003290:CDS |
ATGATGGTAGCATTGAGCTT+TGG | 0.379946 | 2.4:-59634447 | MS.gene003290:CDS |
AACAGTGACCTTGCCGCATC+TGG | 0.381669 | 2.4:-59634005 | MS.gene003290:CDS |
AATAATGAGGAATTCTTGTC+TGG | 0.393333 | 2.4:-59634475 | MS.gene003290:CDS |
ATTGTTCGTCAGTACACTCT+TGG | 0.407718 | 2.4:-59634052 | MS.gene003290:CDS |
TCAGAAAAGCTATTGCTTCA+AGG | 0.412080 | 2.4:-59636158 | MS.gene003290:intron |
AAATTCCTAGTTGCTGGAGT+TGG | 0.422760 | 2.4:-59633752 | MS.gene003290:CDS |
TGAGGAATTCTTGTCTGGTT+CGG | 0.438253 | 2.4:-59634470 | MS.gene003290:CDS |
TTGATTGTTTACGCAAAGAA+AGG | 0.438257 | 2.4:-59634837 | MS.gene003290:CDS |
TTCTTGTCTGGTTCGGATGA+TGG | 0.442227 | 2.4:-59634463 | MS.gene003290:CDS |
TACTTAATACTTCACTTTGG+TGG | 0.445587 | 2.4:+59634860 | None:intergenic |
ACTTACATGAATACTCTGTT+TGG | 0.448065 | 2.4:-59634883 | MS.gene003290:CDS |
TCTGAAGTCCCATGGCTTGA+AGG | 0.451032 | 2.4:-59635626 | MS.gene003290:CDS |
AATTCCTAGTTGCTGGAGTT+GGG | 0.454442 | 2.4:-59633751 | MS.gene003290:CDS |
GGACTTCAGAACCGAATCAA+TGG | 0.457791 | 2.4:+59635639 | None:intergenic |
GCTATCGACGAAGATGATAA+AGG | 0.458031 | 2.4:-59636205 | None:intergenic |
TGATCGTCATATTCATATAT+GGG | 0.461527 | 2.4:-59635515 | MS.gene003290:CDS |
GTATAAGTGGCCCATTGATT+CGG | 0.462919 | 2.4:-59635650 | MS.gene003290:CDS |
GCATTCCTCAAAATATGAAT+AGG | 0.478685 | 2.4:+59634406 | None:intergenic |
TCTCATGATGACAATTTAAG+TGG | 0.478829 | 2.4:+59632107 | None:intergenic |
TGACGAACAATGGTGATTCT+CGG | 0.481332 | 2.4:+59634064 | None:intergenic |
GACCTTGCCGCATCTGGTGC+GGG | 0.481462 | 2.4:-59633999 | MS.gene003290:CDS |
CCTAGTTGCTGGAGTTGGGC+AGG | 0.482464 | 2.4:-59633747 | MS.gene003290:intron |
GACGAACAATGGTGATTCTC+GGG | 0.482880 | 2.4:+59634065 | None:intergenic |
TGACCTTGCCGCATCTGGTG+CGG | 0.500692 | 2.4:-59634000 | MS.gene003290:CDS |
GACTTCAGAACCGAATCAAT+GGG | 0.500825 | 2.4:+59635640 | None:intergenic |
CTAAAAGCCAGAGAAGAAAC+AGG | 0.502189 | 2.4:+59634976 | None:intergenic |
AGATGGAAGCATTGTGCAAT+GGG | 0.503563 | 2.4:-59635698 | MS.gene003290:CDS |
TTGTTCGTCAGTACACTCTT+GGG | 0.515002 | 2.4:-59634051 | MS.gene003290:CDS |
CAATACTTAATACTTCACTT+TGG | 0.525590 | 2.4:+59634857 | None:intergenic |
TTATTTAGGGTTAAACTGGA+TGG | 0.527005 | 2.4:-59635814 | MS.gene003290:intron |
ATATATGGGATACGCGCACT+AGG | 0.531446 | 2.4:-59635501 | MS.gene003290:CDS |
ACTTTGGCTGCAAGTTCAGA+TGG | 0.532678 | 2.4:-59635562 | MS.gene003290:CDS |
ATGGTCGCTATTTGGCAACT+GGG | 0.534092 | 2.4:-59635543 | MS.gene003290:CDS |
CCTGCCCAACTCCAGCAACT+AGG | 0.543124 | 2.4:+59633747 | None:intergenic |
AAAGAAAGGGTATTATCTGC+TGG | 0.543326 | 2.4:-59634823 | MS.gene003290:CDS |
GATTCGGTTCTGAAGTCCCA+TGG | 0.547975 | 2.4:-59635634 | MS.gene003290:CDS |
AGGTTTACCTAGGTTACCGT+TGG | 0.548172 | 2.4:+59634327 | None:intergenic |
TGATTGTTTACGCAAAGAAA+GGG | 0.549662 | 2.4:-59634836 | MS.gene003290:CDS |
AGAATACGTGAAGCTCGTAA+TGG | 0.550611 | 2.4:-59632143 | MS.gene003290:CDS |
AGGAACCTCGTCTAGGAAGG+TGG | 0.554796 | 2.4:-59632169 | MS.gene003290:CDS |
TACAGGAACCTCGTCTAGGA+AGG | 0.557034 | 2.4:-59632172 | MS.gene003290:intron |
TTATCTGAGGATGATTCTAA+GGG | 0.562293 | 2.4:-59635736 | MS.gene003290:CDS |
CAGCATTCTAAGGAAGATGC+AGG | 0.563049 | 2.4:+59634508 | None:intergenic |
ATACTACCCAACGGTAACCT+AGG | 0.563236 | 2.4:-59634334 | MS.gene003290:intron |
CTTGAGGATCCTTCAAGCCA+TGG | 0.567504 | 2.4:+59635617 | None:intergenic |
GGAACCTCGTCTAGGAAGGT+GGG | 0.567525 | 2.4:-59632168 | MS.gene003290:CDS |
ACCGCTTCATAATGTACCGT+TGG | 0.569065 | 2.4:-59633925 | MS.gene003290:intron |
ACCATTACCCGCACCAGATG+CGG | 0.576457 | 2.4:+59633992 | None:intergenic |
AAGATGGAAGCATTGTGCAA+TGG | 0.576859 | 2.4:-59635699 | MS.gene003290:CDS |
CTTCCCCACCTTCCTAGACG+AGG | 0.577906 | 2.4:+59632164 | None:intergenic |
TTGAGGATCCTTCAAGCCAT+GGG | 0.579870 | 2.4:+59635618 | None:intergenic |
AGGGTTAAACTGGATGGTCA+TGG | 0.580849 | 2.4:-59635808 | MS.gene003290:CDS |
AACAATGGTGATTCTCGGGA+TGG | 0.581006 | 2.4:+59634069 | None:intergenic |
GGTTTACCTAGGTTACCGTT+GGG | 0.589730 | 2.4:+59634328 | None:intergenic |
GGAAATGTGAGAGGTATAAG+TGG | 0.597715 | 2.4:-59635663 | MS.gene003290:CDS |
TACCCGCACCAGATGCGGCA+AGG | 0.597735 | 2.4:+59633997 | None:intergenic |
TACTGCGGTGGCTTTATCTG+AGG | 0.604178 | 2.4:-59635749 | MS.gene003290:CDS |
GAACCTCGTCTAGGAAGGTG+GGG | 0.608130 | 2.4:-59632167 | MS.gene003290:CDS |
TCAGTGCAGTGACCGTCTGT+AGG | 0.612967 | 2.4:-59634028 | MS.gene003290:CDS |
TGCAATGGGATGTTGAGAGT+GGG | 0.616349 | 2.4:-59635684 | MS.gene003290:CDS |
ACAACTGCATACTACGATCA+CGG | 0.616853 | 2.4:+59634800 | None:intergenic |
TTGAGAGTGGGAAATGTGAG+AGG | 0.619145 | 2.4:-59635672 | MS.gene003290:CDS |
ACCAACGGTACATTATGAAG+CGG | 0.619771 | 2.4:+59633924 | None:intergenic |
TGCTTTGTAGCAGAACCTTG+AGG | 0.621073 | 2.4:+59635601 | None:intergenic |
TATATGGGATACGCGCACTA+GGG | 0.624499 | 2.4:-59635500 | MS.gene003290:CDS |
GATGATAAAGGAGCAGCAAG+AGG | 0.629548 | 2.4:-59636193 | MS.gene003290:CDS |
TGGTCGCTATTTGGCAACTG+GGG | 0.630469 | 2.4:-59635542 | MS.gene003290:CDS |
AAGGTCACTGTTCCTACAGA+CGG | 0.637361 | 2.4:+59634016 | None:intergenic |
AAGAGTGTACTGACGAACAA+TGG | 0.638794 | 2.4:+59634054 | None:intergenic |
AAACGATCCAGAAAATAGCT+CGG | 0.640991 | 2.4:+59634942 | None:intergenic |
GGTCGCTATTTGGCAACTGG+GGG | 0.641423 | 2.4:-59635541 | MS.gene003290:CDS |
GAAACAGGACCTCTATGACC+AGG | 0.641871 | 2.4:+59634991 | None:intergenic |
AAGGAGCAGCAAGAGGAGAG+TGG | 0.643486 | 2.4:-59636186 | MS.gene003290:CDS |
GATTAAGATATGGAATGTTG+AGG | 0.643891 | 2.4:-59634911 | MS.gene003290:CDS |
TAAACAATGTGTTACTGCGG+TGG | 0.645198 | 2.4:-59635761 | MS.gene003290:CDS |
AATGGTGATTCTCGGGATGG+TGG | 0.653592 | 2.4:+59634072 | None:intergenic |
GTGCAATGGGATGTTGAGAG+TGG | 0.654323 | 2.4:-59635685 | MS.gene003290:CDS |
GTTAAACTGGATGGTCATGG+TGG | 0.654394 | 2.4:-59635805 | MS.gene003290:CDS |
CATGGCTTGAAGGATCCTCA+AGG | 0.657629 | 2.4:-59635616 | MS.gene003290:CDS |
GATGGTAGCATTGAGCTTTG+GGG | 0.661259 | 2.4:-59634445 | MS.gene003290:CDS |
GATAGTGAAATACTACCCAA+CGG | 0.686398 | 2.4:-59634343 | MS.gene003290:CDS |
GCATAAACAATGTGTTACTG+CGG | 0.761595 | 2.4:-59635764 | MS.gene003290:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTAAGTGATTAATTAAT+AGG | - | chr2.4:59633631-59633650 | MS.gene003290:intron | 10.0% |
!!! | ATTAGTATATTGTTTTTTAA+TGG | - | chr2.4:59635952-59635971 | MS.gene003290:intron | 10.0% |
!!! | TTAGTATATTGTTTTTTAAT+GGG | - | chr2.4:59635953-59635972 | MS.gene003290:intron | 10.0% |
!! | AAATGAAAATATAATCATTG+AGG | + | chr2.4:59634096-59634115 | None:intergenic | 15.0% |
!! | AACTAAACTCATTTATTTAT+TGG | - | chr2.4:59634415-59634434 | MS.gene003290:CDS | 15.0% |
!! | AATTATTCAATTAAACCAAA+AGG | + | chr2.4:59632297-59632316 | None:intergenic | 15.0% |
!! | AATTATTCATTTAAACCAAA+AGG | + | chr2.4:59632355-59632374 | None:intergenic | 15.0% |
!! | AATTGAATAATTAAAGCAAT+GGG | - | chr2.4:59632406-59632425 | MS.gene003290:intron | 15.0% |
!! | AATTTGTATTTAGTAATTCT+TGG | - | chr2.4:59633174-59633193 | MS.gene003290:intron | 15.0% |
!! | ATATTCAAAAATACAATTGT+TGG | - | chr2.4:59632895-59632914 | MS.gene003290:intron | 15.0% |
!! | ATTATTCAATTAAACCAAAA+GGG | + | chr2.4:59632296-59632315 | None:intergenic | 15.0% |
!! | ATTATTCATTTAAACCAAAA+GGG | + | chr2.4:59632354-59632373 | None:intergenic | 15.0% |
!! | GAATTACTAAATACAAATTA+AGG | + | chr2.4:59633173-59633192 | None:intergenic | 15.0% |
!! | TAAAAAATTGTATTGTAGAA+GGG | + | chr2.4:59635008-59635027 | None:intergenic | 15.0% |
!! | TAATTGAATAATTAAAGCAA+TGG | - | chr2.4:59632405-59632424 | MS.gene003290:intron | 15.0% |
!! | TTAGTATATGCATATTAATA+TGG | - | chr2.4:59635280-59635299 | MS.gene003290:intron | 15.0% |
!! | TTGAATAATTATTGAAACAA+TGG | - | chr2.4:59632307-59632326 | MS.gene003290:intron | 15.0% |
!!! | ATCCAAAGTATAAATTTTTA+AGG | + | chr2.4:59635209-59635228 | None:intergenic | 15.0% |
!!! | ATTTTACTTAATTTTCTCTT+TGG | - | chr2.4:59634632-59634651 | MS.gene003290:intron | 15.0% |
!! | AAACAAGCAATTTAACAAAA+AGG | + | chr2.4:59632245-59632264 | None:intergenic | 20.0% |
!! | AAATGAATAATTGAAGCAAT+GGG | - | chr2.4:59632363-59632382 | MS.gene003290:intron | 20.0% |
!! | AACAAGCAATTTAACAAAAA+GGG | + | chr2.4:59632244-59632263 | None:intergenic | 20.0% |
!! | AATCACTATTTCAAAAAAGA+TGG | + | chr2.4:59634736-59634755 | None:intergenic | 20.0% |
!! | ACAAATGACAGATATATTTA+CGG | + | chr2.4:59634122-59634141 | None:intergenic | 20.0% |
!! | ACTATCAATACAGTATTTAA+AGG | + | chr2.4:59633997-59634016 | None:intergenic | 20.0% |
!! | AGAAGATAGTTAATTGTTAT+GGG | - | chr2.4:59635256-59635275 | MS.gene003290:intron | 20.0% |
!! | ATGTTATATGTTAACATAAG+CGG | - | chr2.4:59633139-59633158 | MS.gene003290:intron | 20.0% |
!! | CTAAAAAATTGTATTGTAGA+AGG | + | chr2.4:59635009-59635028 | None:intergenic | 20.0% |
!! | GAAGGAATTAATAACATTAA+GGG | - | chr2.4:59635480-59635499 | MS.gene003290:intron | 20.0% |
!! | TAAATGAATAATTGAAGCAA+TGG | - | chr2.4:59632362-59632381 | MS.gene003290:intron | 20.0% |
!! | TAGAAGATAGTTAATTGTTA+TGG | - | chr2.4:59635255-59635274 | MS.gene003290:intron | 20.0% |
!! | TGAAGGAATTAATAACATTA+AGG | - | chr2.4:59635479-59635498 | MS.gene003290:intron | 20.0% |
!! | TGCCTTAAAAATTTATACTT+TGG | - | chr2.4:59635204-59635223 | MS.gene003290:intron | 20.0% |
!! | TGTTTGTATTTACAGATTAA+GGG | - | chr2.4:59632975-59632994 | MS.gene003290:intron | 20.0% |
!! | TTCTAAATGGAGTTTAATAA+AGG | + | chr2.4:59635602-59635621 | None:intergenic | 20.0% |
!! | TTGTTTGTATTTACAGATTA+AGG | - | chr2.4:59632974-59632993 | MS.gene003290:intron | 20.0% |
!! | TTTATTAAACTCCATTTAGA+AGG | - | chr2.4:59635601-59635620 | MS.gene003290:CDS | 20.0% |
!!! | AATTGTTGGATATTTTTTTG+GGG | - | chr2.4:59632909-59632928 | MS.gene003290:intron | 20.0% |
!!! | ACAATTGTTGGATATTTTTT+TGG | - | chr2.4:59632907-59632926 | MS.gene003290:intron | 20.0% |
!!! | CAATTGTTGGATATTTTTTT+GGG | - | chr2.4:59632908-59632927 | MS.gene003290:intron | 20.0% |
!!! | TAATAAATCTTTTGTATCAC+AGG | - | chr2.4:59634488-59634507 | MS.gene003290:CDS | 20.0% |
!!! | TACAATTTTTGTTTAGATTG+AGG | - | chr2.4:59635910-59635929 | MS.gene003290:intron | 20.0% |
!!! | TTAACAAAATGTCTTTTTAC+AGG | - | chr2.4:59636112-59636131 | MS.gene003290:intron | 20.0% |
! | AAGATGAAGTCTTAAGTATA+TGG | - | chr2.4:59633540-59633559 | MS.gene003290:intron | 25.0% |
! | AATGAACAACAAGGTTATAT+AGG | - | chr2.4:59632868-59632887 | MS.gene003290:intron | 25.0% |
! | AATTTCTTTCCTATCTTCAA+AGG | - | chr2.4:59633655-59633674 | MS.gene003290:intron | 25.0% |
! | ATATACTTAAGACTTCATCT+TGG | + | chr2.4:59633541-59633560 | None:intergenic | 25.0% |
! | ATATTGAGAAAAGTAAGCAA+AGG | + | chr2.4:59634062-59634081 | None:intergenic | 25.0% |
! | ATGAACAACAAGGTTATATA+GGG | - | chr2.4:59632869-59632888 | MS.gene003290:intron | 25.0% |
! | ATGTGTATTCTCTGTAATTT+AGG | - | chr2.4:59633738-59633757 | MS.gene003290:intron | 25.0% |
! | ATGTTAAGTGATTAAAGTGA+AGG | - | chr2.4:59635462-59635481 | MS.gene003290:intron | 25.0% |
! | CAAAACCATATTGTATATGT+CGG | - | chr2.4:59633566-59633585 | MS.gene003290:intron | 25.0% |
! | CAAAGTTTCAAAGAATGAAA+AGG | + | chr2.4:59632847-59632866 | None:intergenic | 25.0% |
! | CAATACTTAATACTTCACTT+TGG | + | chr2.4:59633447-59633466 | None:intergenic | 25.0% |
! | CATAAGAAGTAAATTTCTGA+AGG | + | chr2.4:59634021-59634040 | None:intergenic | 25.0% |
! | GTTATAGTTAGCATTATGTT+AGG | - | chr2.4:59634162-59634181 | MS.gene003290:intron | 25.0% |
! | TGATCGTCATATTCATATAT+GGG | - | chr2.4:59632786-59632805 | MS.gene003290:intron | 25.0% |
! | TTGATCGTCATATTCATATA+TGG | - | chr2.4:59632785-59632804 | MS.gene003290:intron | 25.0% |
! | TTTGGCTAAATTGATTGATT+TGG | - | chr2.4:59632459-59632478 | MS.gene003290:intron | 25.0% |
!! | AAAAGAAATAAAGAAGTGCA+AGG | + | chr2.4:59635110-59635129 | None:intergenic | 25.0% |
!! | AAAGAAATAAAGAAGTGCAA+GGG | + | chr2.4:59635109-59635128 | None:intergenic | 25.0% |
!! | AACTAAATTTTCAGCGATTA+TGG | - | chr2.4:59635303-59635322 | MS.gene003290:intron | 25.0% |
!! | AATAGTGATTTTGTAGAGAA+TGG | - | chr2.4:59634746-59634765 | MS.gene003290:intron | 25.0% |
!! | CAAAAGTACAAGCATATTTA+TGG | - | chr2.4:59633203-59633222 | MS.gene003290:intron | 25.0% |
!! | CTAAAGCAATAGAGTTTTTA+GGG | + | chr2.4:59635370-59635389 | None:intergenic | 25.0% |
!! | GTAGTATTTCACTATCTTTT+TGG | + | chr2.4:59633954-59633973 | None:intergenic | 25.0% |
!! | TTGGCTAAATTGATTGATTT+GGG | - | chr2.4:59632460-59632479 | MS.gene003290:intron | 25.0% |
!! | TTTTCTGTCAATAGAGTTTA+AGG | + | chr2.4:59635179-59635198 | None:intergenic | 25.0% |
!!! | AAACTTTGAAATGAACAACA+AGG | - | chr2.4:59632859-59632878 | MS.gene003290:intron | 25.0% |
!!! | AACTATCTTCTAAAGTAGTT+CGG | + | chr2.4:59635247-59635266 | None:intergenic | 25.0% |
!!! | AATGAAATTAGCCTTCTAAA+TGG | + | chr2.4:59635615-59635634 | None:intergenic | 25.0% |
!!! | CTGTTGTTTTGTTAATAATG+AGG | - | chr2.4:59633813-59633832 | MS.gene003290:intron | 25.0% |
!!! | GTAATGGTTTTGTTAGATTA+TGG | - | chr2.4:59634324-59634343 | MS.gene003290:intron | 25.0% |
!!! | TAAAGCAATAGAGTTTTTAG+GGG | + | chr2.4:59635369-59635388 | None:intergenic | 25.0% |
!!! | TCTAAAGCAATAGAGTTTTT+AGG | + | chr2.4:59635371-59635390 | None:intergenic | 25.0% |
!!! | TTACTCTGTTTTTTCTTCTT+TGG | - | chr2.4:59634604-59634623 | MS.gene003290:intron | 25.0% |
AACAAAACAACAGCATTCTA+AGG | + | chr2.4:59633806-59633825 | None:intergenic | 30.0% | |
AACATCCGACATATACAATA+TGG | + | chr2.4:59633574-59633593 | None:intergenic | 30.0% | |
AAGGTTAAAAGCAAGAGTTA+GGG | + | chr2.4:59635821-59635840 | None:intergenic | 30.0% | |
AATAATGAGGAATTCTTGTC+TGG | - | chr2.4:59633826-59633845 | MS.gene003290:intron | 30.0% | |
AATACAAAATCCCCTCAAAA+TGG | + | chr2.4:59635037-59635056 | None:intergenic | 30.0% | |
ACATGCATTATTATATGCAG+GGG | + | chr2.4:59634885-59634904 | None:intergenic | 30.0% | |
ACCACAATTAAATCCCAAAA+TGG | - | chr2.4:59635553-59635572 | MS.gene003290:CDS | 30.0% | |
ACTTACATGAATACTCTGTT+TGG | - | chr2.4:59633418-59633437 | MS.gene003290:intron | 30.0% | |
ATACAAAATCCCCTCAAAAT+GGG | + | chr2.4:59635036-59635055 | None:intergenic | 30.0% | |
ATATTTATGGCCAAATCTGT+AGG | - | chr2.4:59633216-59633235 | MS.gene003290:intron | 30.0% | |
ATTGGATTCATATTCATGCT+TGG | - | chr2.4:59634433-59634452 | MS.gene003290:CDS | 30.0% | |
CAGTATTTAAAGGTTTACCT+AGG | + | chr2.4:59633987-59634006 | None:intergenic | 30.0% | |
GACATGCATTATTATATGCA+GGG | + | chr2.4:59634886-59634905 | None:intergenic | 30.0% | |
GATTAAGATATGGAATGTTG+AGG | - | chr2.4:59633390-59633409 | MS.gene003290:intron | 30.0% | |
GATTTACAGAAAGGATGTTT+AGG | - | chr2.4:59635870-59635889 | MS.gene003290:intron | 30.0% | |
GCATTCCTCAAAATATGAAT+AGG | + | chr2.4:59633898-59633917 | None:intergenic | 30.0% | |
TAAGGTTAAAAGCAAGAGTT+AGG | + | chr2.4:59635822-59635841 | None:intergenic | 30.0% | |
TACTTAATACTTCACTTTGG+TGG | + | chr2.4:59633444-59633463 | None:intergenic | 30.0% | |
TATCTTCACTATGCAGAAAA+TGG | - | chr2.4:59634203-59634222 | MS.gene003290:intron | 30.0% | |
TATTTATGGCCAAATCTGTA+GGG | - | chr2.4:59633217-59633236 | MS.gene003290:intron | 30.0% | |
TCAAACAATTTGATCGTCAA+TGG | + | chr2.4:59635769-59635788 | None:intergenic | 30.0% | |
TGATTGTTTACGCAAAGAAA+GGG | - | chr2.4:59633465-59633484 | MS.gene003290:intron | 30.0% | |
TTAATAACATTAAGGGTCTC+AGG | - | chr2.4:59635487-59635506 | MS.gene003290:intron | 30.0% | |
TTATCTGAGGATGATTCTAA+GGG | - | chr2.4:59632565-59632584 | MS.gene003290:intron | 30.0% | |
TTGATCGAACGATTAAGATA+TGG | - | chr2.4:59633380-59633399 | MS.gene003290:intron | 30.0% | |
TTGATTGTTTACGCAAAGAA+AGG | - | chr2.4:59633464-59633483 | MS.gene003290:intron | 30.0% | |
TTTATCTGAGGATGATTCTA+AGG | - | chr2.4:59632564-59632583 | MS.gene003290:intron | 30.0% | |
TTTCTGCATAGTGAAGATAA+TGG | + | chr2.4:59634202-59634221 | None:intergenic | 30.0% | |
! | AAATCTTTTGTATCACAGGT+TGG | - | chr2.4:59634492-59634511 | MS.gene003290:CDS | 30.0% |
! | AATCTTTTGTATCACAGGTT+GGG | - | chr2.4:59634493-59634512 | MS.gene003290:CDS | 30.0% |
! | AGAAGCCTATTCATATTTTG+AGG | - | chr2.4:59633890-59633909 | MS.gene003290:intron | 30.0% |
! | ATTGTATTGTAGAAGGGTTT+TGG | + | chr2.4:59635002-59635021 | None:intergenic | 30.0% |
! | ATTTTCCAAAAACAGAGCAA+TGG | + | chr2.4:59633612-59633631 | None:intergenic | 30.0% |
! | GAGAGTATGATAACATAGAT+TGG | - | chr2.4:59634952-59634971 | MS.gene003290:CDS | 30.0% |
! | TGATTTCAATGTAACCCTTT+TGG | - | chr2.4:59632337-59632356 | MS.gene003290:intron | 30.0% |
! | TGATTTCAATGTGACTCTTT+TGG | - | chr2.4:59632441-59632460 | MS.gene003290:intron | 30.0% |
! | TTATTTAGGGTTAAACTGGA+TGG | - | chr2.4:59632487-59632506 | MS.gene003290:intron | 30.0% |
! | TTTTGTCCATTGTCTTTTAC+AGG | - | chr2.4:59633282-59633301 | MS.gene003290:intron | 30.0% |
!! | AAAGCAATAGAGTTTTTAGG+GGG | + | chr2.4:59635368-59635387 | None:intergenic | 30.0% |
!! | TGATTTGGGTGTGTTATTTA+GGG | - | chr2.4:59632474-59632493 | MS.gene003290:intron | 30.0% |
!! | TGTGTTATTTAGGGTTAAAC+TGG | - | chr2.4:59632483-59632502 | MS.gene003290:intron | 30.0% |
!! | TTGATTTGGGTGTGTTATTT+AGG | - | chr2.4:59632473-59632492 | MS.gene003290:intron | 30.0% |
!!! | AAGTAGACAGATTTTGACTT+TGG | - | chr2.4:59632723-59632742 | MS.gene003290:intron | 30.0% |
!!! | ATTTTGGGATTTAATTGTGG+TGG | + | chr2.4:59635554-59635573 | None:intergenic | 30.0% |
!!! | CTTTTTCAAGGAGAATAAGT+GGG | - | chr2.4:59634837-59634856 | MS.gene003290:CDS | 30.0% |
!!! | TCCATTTTGGGATTTAATTG+TGG | + | chr2.4:59635557-59635576 | None:intergenic | 30.0% |
!!! | TTTTAGTTTCCCCATTTTGA+GGG | - | chr2.4:59635023-59635042 | MS.gene003290:intron | 30.0% |
!!! | TTTTTAGTTTCCCCATTTTG+AGG | - | chr2.4:59635022-59635041 | MS.gene003290:intron | 30.0% |
!!! | TTTTTCAAGGAGAATAAGTG+GGG | - | chr2.4:59634838-59634857 | MS.gene003290:CDS | 30.0% |
AAACGATCCAGAAAATAGCT+CGG | + | chr2.4:59633362-59633381 | None:intergenic | 35.0% | |
AACTAACAGCTTTGCATAAG+TGG | - | chr2.4:59636052-59636071 | MS.gene003290:intron | 35.0% | |
ACAAGTCTACTTCGTATAAC+TGG | + | chr2.4:59635658-59635677 | None:intergenic | 35.0% | |
ATGAAGCGGTTTAATGTCTT+TGG | + | chr2.4:59634366-59634385 | None:intergenic | 35.0% | |
ATTGCAGTTGGAAATTTCAC+TGG | - | chr2.4:59634461-59634480 | MS.gene003290:CDS | 35.0% | |
CAAAATGGATATTGCTACAG+CGG | - | chr2.4:59635568-59635587 | MS.gene003290:CDS | 35.0% | |
CATAGCTGAAGTCAAATGTT+GGG | - | chr2.4:59635844-59635863 | MS.gene003290:intron | 35.0% | |
CATTCAGAAAAAGTCTCATG+AGG | + | chr2.4:59633711-59633730 | None:intergenic | 35.0% | |
CCACTTATTCTCCTTGAAAA+AGG | + | chr2.4:59634839-59634858 | None:intergenic | 35.0% | |
GAAAAAGTCTCATGAGGAAA+TGG | + | chr2.4:59633705-59633724 | None:intergenic | 35.0% | |
GAAAAGCCTGTAAAAGACAA+TGG | + | chr2.4:59633291-59633310 | None:intergenic | 35.0% | |
GAATAGATTAGTACAGCTCT+AGG | - | chr2.4:59632934-59632953 | MS.gene003290:intron | 35.0% | |
GATAGTGAAATACTACCCAA+CGG | - | chr2.4:59633958-59633977 | MS.gene003290:CDS | 35.0% | |
GGACATGCATTATTATATGC+AGG | + | chr2.4:59634887-59634906 | None:intergenic | 35.0% | |
TACAAAATCCCCTCAAAATG+GGG | + | chr2.4:59635035-59635054 | None:intergenic | 35.0% | |
TCAGAAAAGCTATTGCTTCA+AGG | - | chr2.4:59632143-59632162 | MS.gene003290:CDS | 35.0% | |
TCGTAGTATGCAGTTGTTTA+AGG | - | chr2.4:59633507-59633526 | MS.gene003290:intron | 35.0% | |
TGAATAATTGCAGCTGTTGT+TGG | - | chr2.4:59635732-59635751 | MS.gene003290:CDS | 35.0% | |
TTAGAGTGCATTTGATAGAG+TGG | - | chr2.4:59635386-59635405 | MS.gene003290:intron | 35.0% | |
TTATACTCCTTTCCCTTGTT+TGG | - | chr2.4:59633002-59633021 | MS.gene003290:intron | 35.0% | |
! | AAGAAACAGCCTTTGAAGAT+AGG | + | chr2.4:59633667-59633686 | None:intergenic | 35.0% |
! | GCATAAACAATGTGTTACTG+CGG | - | chr2.4:59632537-59632556 | MS.gene003290:intron | 35.0% |
! | GCTGTAGCAATATCCATTTT+GGG | + | chr2.4:59635569-59635588 | None:intergenic | 35.0% |
! | TCAAGTGAGATGATTGATTC+AGG | + | chr2.4:59636013-59636032 | None:intergenic | 35.0% |
! | TGATTTCAATGTGACCCTTT+TGG | - | chr2.4:59632279-59632298 | MS.gene003290:intron | 35.0% |
! | TTTGACTTCAGCTATGCTTA+AGG | + | chr2.4:59635840-59635859 | None:intergenic | 35.0% |
!! | AAAGAAAGGGTATTATCTGC+TGG | - | chr2.4:59633478-59633497 | MS.gene003290:intron | 35.0% |
!! | ACGTTCATTAGTTTGTTGTC+TGG | - | chr2.4:59635980-59635999 | MS.gene003290:intron | 35.0% |
!! | ATCTTCAAAGGCTGTTTCTT+GGG | - | chr2.4:59633667-59633686 | MS.gene003290:intron | 35.0% |
!! | GCTAGAATTCACCTTTTTCA+AGG | - | chr2.4:59634825-59634844 | MS.gene003290:CDS | 35.0% |
!! | TAGTTGGGACTTGTTATTGT+TGG | - | chr2.4:59633252-59633271 | MS.gene003290:intron | 35.0% |
!! | TATCTTCAAAGGCTGTTTCT+TGG | - | chr2.4:59633666-59633685 | MS.gene003290:intron | 35.0% |
!! | TTTAGTTTCCCCATTTTGAG+GGG | - | chr2.4:59635024-59635043 | MS.gene003290:intron | 35.0% |
!!! | AATGGGTTGTTTGACACTTT+TGG | - | chr2.4:59632380-59632399 | MS.gene003290:intron | 35.0% |
!!! | CCTTTTTCAAGGAGAATAAG+TGG | - | chr2.4:59634836-59634855 | MS.gene003290:CDS | 35.0% |
!!! | TATTGTAGAAGGGTTTTGGA+GGG | + | chr2.4:59634998-59635017 | None:intergenic | 35.0% |
!!! | TGTTGGATATTTTTTTGGGG+TGG | - | chr2.4:59632912-59632931 | MS.gene003290:intron | 35.0% |
!!! | TGTTTCTTCTCTGGCTTTTA+GGG | - | chr2.4:59633327-59633346 | MS.gene003290:intron | 35.0% |
!!! | TTTTAGGGGGTAAGAGTATT+AGG | + | chr2.4:59635355-59635374 | None:intergenic | 35.0% |
AAAGCAAGAGTTAGGGTTGA+CGG | + | chr2.4:59635814-59635833 | None:intergenic | 40.0% | |
AAAGGTGAATTCTAGCCACT+AGG | + | chr2.4:59634821-59634840 | None:intergenic | 40.0% | |
AAATTCCTAGTTGCTGGAGT+TGG | - | chr2.4:59634549-59634568 | MS.gene003290:intron | 40.0% | |
AACGTTACCAAACAAGGGAA+AGG | + | chr2.4:59633012-59633031 | None:intergenic | 40.0% | |
AAGTTCAGATGGTCGCTATT+TGG | - | chr2.4:59632750-59632769 | MS.gene003290:intron | 40.0% | |
AATTCCTAGTTGCTGGAGTT+GGG | - | chr2.4:59634550-59634569 | MS.gene003290:intron | 40.0% | |
ACAACTGCATACTACGATCA+CGG | + | chr2.4:59633504-59633523 | None:intergenic | 40.0% | |
ACCAACGGTACATTATGAAG+CGG | + | chr2.4:59634380-59634399 | None:intergenic | 40.0% | |
AGAACGAACGTTACCAAACA+AGG | + | chr2.4:59633018-59633037 | None:intergenic | 40.0% | |
AGAATACGTGAAGCTCGTAA+TGG | - | chr2.4:59636158-59636177 | MS.gene003290:intron | 40.0% | |
AGTCCAATACCCTACAGATT+TGG | + | chr2.4:59633229-59633248 | None:intergenic | 40.0% | |
ATTGTTCGTCAGTACACTCT+TGG | - | chr2.4:59634249-59634268 | MS.gene003290:intron | 40.0% | |
CTAAAAGCCAGAGAAGAAAC+AGG | + | chr2.4:59633328-59633347 | None:intergenic | 40.0% | |
CTCTGTTTGCAAGTTTAGAG+GGG | + | chr2.4:59635156-59635175 | None:intergenic | 40.0% | |
GAACGAACGTTACCAAACAA+GGG | + | chr2.4:59633017-59633036 | None:intergenic | 40.0% | |
GACTTCAGAACCGAATCAAT+GGG | + | chr2.4:59632664-59632683 | None:intergenic | 40.0% | |
GCATAGCTGAAGTCAAATGT+TGG | - | chr2.4:59635843-59635862 | MS.gene003290:intron | 40.0% | |
GCTATCCTTCTACTTACCAA+CGG | + | chr2.4:59634395-59634414 | None:intergenic | 40.0% | |
GCTCTGTTTGCAAGTTTAGA+GGG | + | chr2.4:59635157-59635176 | None:intergenic | 40.0% | |
GGTTGGGTTTGTCAATTCTT+TGG | - | chr2.4:59634509-59634528 | MS.gene003290:CDS | 40.0% | |
GTTGGGAGTGATTTACAGAA+AGG | - | chr2.4:59635861-59635880 | MS.gene003290:intron | 40.0% | |
TCAGCAAAATTCCTAGTTGC+TGG | - | chr2.4:59634543-59634562 | MS.gene003290:CDS | 40.0% | |
TCCAAAAACAGAGCAATGGT+GGG | + | chr2.4:59633608-59633627 | None:intergenic | 40.0% | |
TGACGAACAATGGTGATTCT+CGG | + | chr2.4:59634240-59634259 | None:intergenic | 40.0% | |
TGAGGAATTCTTGTCTGGTT+CGG | - | chr2.4:59633831-59633850 | MS.gene003290:intron | 40.0% | |
TTCCAAAAACAGAGCAATGG+TGG | + | chr2.4:59633609-59633628 | None:intergenic | 40.0% | |
TTGTTCGTCAGTACACTCTT+GGG | - | chr2.4:59634250-59634269 | MS.gene003290:intron | 40.0% | |
TTTGCAAGTTTAGAGGGGAA+GGG | + | chr2.4:59635151-59635170 | None:intergenic | 40.0% | |
! | AAAGAAGTGCAAGGGATGAA+GGG | + | chr2.4:59635101-59635120 | None:intergenic | 40.0% |
! | AAGAGTGTACTGACGAACAA+TGG | + | chr2.4:59634250-59634269 | None:intergenic | 40.0% |
! | ATGATGGTAGCATTGAGCTT+TGG | - | chr2.4:59633854-59633873 | MS.gene003290:intron | 40.0% |
! | ATGTACCGTTGGTAAGTAGA+AGG | - | chr2.4:59634387-59634406 | MS.gene003290:CDS | 40.0% |
! | CGCTGTAGCAATATCCATTT+TGG | + | chr2.4:59635570-59635589 | None:intergenic | 40.0% |
! | GGAAATGTGAGAGGTATAAG+TGG | - | chr2.4:59632638-59632657 | MS.gene003290:intron | 40.0% |
! | GGATTTTCAGCTTCGAAAGA+TGG | - | chr2.4:59632586-59632605 | MS.gene003290:intron | 40.0% |
! | GTATAAGTGGCCCATTGATT+CGG | - | chr2.4:59632651-59632670 | MS.gene003290:intron | 40.0% |
! | TAAACAATGTGTTACTGCGG+TGG | - | chr2.4:59632540-59632559 | MS.gene003290:intron | 40.0% |
! | TAAAGAAGTGCAAGGGATGA+AGG | + | chr2.4:59635102-59635121 | None:intergenic | 40.0% |
! | TGATGGTAGCATTGAGCTTT+GGG | - | chr2.4:59633855-59633874 | MS.gene003290:intron | 40.0% |
! | TGTCTTTTACAGGCTTTTCC+TGG | - | chr2.4:59633292-59633311 | MS.gene003290:intron | 40.0% |
! | TTTTTACAGGAACCTCGTCT+AGG | - | chr2.4:59636125-59636144 | MS.gene003290:intron | 40.0% |
!! | AAGATGGAAGCATTGTGCAA+TGG | - | chr2.4:59632602-59632621 | MS.gene003290:intron | 40.0% |
!! | AGATGGAAGCATTGTGCAAT+GGG | - | chr2.4:59632603-59632622 | MS.gene003290:intron | 40.0% |
!! | AGGGTATTGGACTGTTTAGT+TGG | - | chr2.4:59633236-59633255 | MS.gene003290:intron | 40.0% |
!! | GGGTATTGGACTGTTTAGTT+GGG | - | chr2.4:59633237-59633256 | MS.gene003290:intron | 40.0% |
!! | GTATTGTAGAAGGGTTTTGG+AGG | + | chr2.4:59634999-59635018 | None:intergenic | 40.0% |
!! | TTTCTCTTTGGCTCTGCTTA+CGG | - | chr2.4:59634644-59634663 | MS.gene003290:intron | 40.0% |
!! | TTTTTGGTCAAGTAGCCTAG+TGG | - | chr2.4:59634803-59634822 | MS.gene003290:CDS | 40.0% |
!!! | CTGTTTCTTCTCTGGCTTTT+AGG | - | chr2.4:59633326-59633345 | MS.gene003290:intron | 40.0% |
AACAATGGTGATTCTCGGGA+TGG | + | chr2.4:59634235-59634254 | None:intergenic | 45.0% | |
AAGGGTCTCAGGTCTAGATT+TGG | - | chr2.4:59635498-59635517 | MS.gene003290:CDS | 45.0% | |
AAGGTCACTGTTCCTACAGA+CGG | + | chr2.4:59634288-59634307 | None:intergenic | 45.0% | |
AAGTTTAGAGGGGAAGGGAT+AGG | + | chr2.4:59635146-59635165 | None:intergenic | 45.0% | |
ACCGCTTCATAATGTACCGT+TGG | - | chr2.4:59634376-59634395 | MS.gene003290:CDS | 45.0% | |
ACTTTGGCTGCAAGTTCAGA+TGG | - | chr2.4:59632739-59632758 | MS.gene003290:intron | 45.0% | |
AGGGTTAAACTGGATGGTCA+TGG | - | chr2.4:59632493-59632512 | MS.gene003290:intron | 45.0% | |
AGGTTTACCTAGGTTACCGT+TGG | + | chr2.4:59633977-59633996 | None:intergenic | 45.0% | |
AGTTTAGAGGGGAAGGGATA+GGG | + | chr2.4:59635145-59635164 | None:intergenic | 45.0% | |
ATACTACCCAACGGTAACCT+AGG | - | chr2.4:59633967-59633986 | MS.gene003290:CDS | 45.0% | |
ATATATGGGATACGCGCACT+AGG | - | chr2.4:59632800-59632819 | MS.gene003290:intron | 45.0% | |
ATGGTCGCTATTTGGCAACT+GGG | - | chr2.4:59632758-59632777 | MS.gene003290:intron | 45.0% | |
ATTATTATATGCAGGGGCCG+GGG | + | chr2.4:59634879-59634898 | None:intergenic | 45.0% | |
CACTCACTCAGTTAGGTTTC+AGG | - | chr2.4:59635524-59635543 | MS.gene003290:CDS | 45.0% | |
CATTATTATATGCAGGGGCC+GGG | + | chr2.4:59634880-59634899 | None:intergenic | 45.0% | |
GACGAACAATGGTGATTCTC+GGG | + | chr2.4:59634239-59634258 | None:intergenic | 45.0% | |
GCATTATTATATGCAGGGGC+CGG | + | chr2.4:59634881-59634900 | None:intergenic | 45.0% | |
GGACTTCAGAACCGAATCAA+TGG | + | chr2.4:59632665-59632684 | None:intergenic | 45.0% | |
GGCTCTGTTTGCAAGTTTAG+AGG | + | chr2.4:59635158-59635177 | None:intergenic | 45.0% | |
GGTTTACCTAGGTTACCGTT+GGG | + | chr2.4:59633976-59633995 | None:intergenic | 45.0% | |
GTTAAACTGGATGGTCATGG+TGG | - | chr2.4:59632496-59632515 | MS.gene003290:intron | 45.0% | |
GTTTGCAAGTTTAGAGGGGA+AGG | + | chr2.4:59635152-59635171 | None:intergenic | 45.0% | |
TATATGGGATACGCGCACTA+GGG | - | chr2.4:59632801-59632820 | MS.gene003290:intron | 45.0% | |
TGCAATGGGATGTTGAGAGT+GGG | - | chr2.4:59632617-59632636 | MS.gene003290:intron | 45.0% | |
TGCTTGGCTGTAATTGCAGT+TGG | - | chr2.4:59634449-59634468 | MS.gene003290:CDS | 45.0% | |
TGCTTTGTAGCAGAACCTTG+AGG | + | chr2.4:59632703-59632722 | None:intergenic | 45.0% | |
TGGCCAAATCTGTAGGGTAT+TGG | - | chr2.4:59633223-59633242 | MS.gene003290:intron | 45.0% | |
TTGAGAGTGGGAAATGTGAG+AGG | - | chr2.4:59632629-59632648 | MS.gene003290:intron | 45.0% | |
TTGAGGATCCTTCAAGCCAT+GGG | + | chr2.4:59632686-59632705 | None:intergenic | 45.0% | |
! | CAGCATTCTAAGGAAGATGC+AGG | + | chr2.4:59633796-59633815 | None:intergenic | 45.0% |
! | GATGGTAGCATTGAGCTTTG+GGG | - | chr2.4:59633856-59633875 | MS.gene003290:intron | 45.0% |
! | TAGAGGTCCTGTTTCTTCTC+TGG | - | chr2.4:59633318-59633337 | MS.gene003290:intron | 45.0% |
! | TCCCACCATTGCTCTGTTTT+TGG | - | chr2.4:59633604-59633623 | MS.gene003290:intron | 45.0% |
! | TGCAAGGGATGAAGGGTTTT+GGG | + | chr2.4:59635094-59635113 | None:intergenic | 45.0% |
!! | TTCTCTTTGGCTCTGCTTAC+GGG | - | chr2.4:59634645-59634664 | MS.gene003290:intron | 45.0% |
!! | TTCTTGTCTGGTTCGGATGA+TGG | - | chr2.4:59633838-59633857 | MS.gene003290:intron | 45.0% |
!!! | GGAAGTACCGAGCTATTTTC+TGG | - | chr2.4:59633352-59633371 | MS.gene003290:intron | 45.0% |
!!! | TCTTCTCTGGCTTTTAGGGA+AGG | - | chr2.4:59633331-59633350 | MS.gene003290:intron | 45.0% |
!!! | TCAATATATATTTTTTTTTT+TGG | - | chr2.4:59634787-59634806 | MS.gene003290:intron | 5.0% |
AATGGTGATTCTCGGGATGG+TGG | + | chr2.4:59634232-59634251 | None:intergenic | 50.0% | |
CATGGCTTGAAGGATCCTCA+AGG | - | chr2.4:59632685-59632704 | MS.gene003290:intron | 50.0% | |
CTTGAGGATCCTTCAAGCCA+TGG | + | chr2.4:59632687-59632706 | None:intergenic | 50.0% | |
GAAACAGGACCTCTATGACC+AGG | + | chr2.4:59633313-59633332 | None:intergenic | 50.0% | |
GAAGGGATAGGGAGAGCTTT+GGG | + | chr2.4:59635134-59635153 | None:intergenic | 50.0% | |
GATATTGCTACAGCGGCTGA+CGG | - | chr2.4:59635575-59635594 | MS.gene003290:CDS | 50.0% | |
GATGGTCGCTATTTGGCAAC+TGG | - | chr2.4:59632757-59632776 | MS.gene003290:intron | 50.0% | |
GTGCAATGGGATGTTGAGAG+TGG | - | chr2.4:59632616-59632635 | MS.gene003290:intron | 50.0% | |
TACAGGAACCTCGTCTAGGA+AGG | - | chr2.4:59636129-59636148 | MS.gene003290:intron | 50.0% | |
TCCCAACTGAGCTATGCTCA+CGG | - | chr2.4:59634908-59634927 | MS.gene003290:CDS | 50.0% | |
TGAGCATAGCTCAGTTGGGA+GGG | + | chr2.4:59634908-59634927 | None:intergenic | 50.0% | |
TGGTCGCTATTTGGCAACTG+GGG | - | chr2.4:59632759-59632778 | MS.gene003290:intron | 50.0% | |
TTGGCTGCACTCACTCAGTT+AGG | - | chr2.4:59635517-59635536 | MS.gene003290:CDS | 50.0% | |
! | AGGAGAATAAGTGGGGTGTC+CGG | - | chr2.4:59634845-59634864 | MS.gene003290:CDS | 50.0% |
! | CAGGCTTTTCCTGGTCATAG+AGG | - | chr2.4:59633301-59633320 | MS.gene003290:intron | 50.0% |
! | GTGCAAGGGATGAAGGGTTT+TGG | + | chr2.4:59635095-59635114 | None:intergenic | 50.0% |
! | TCTGAAGTCCCATGGCTTGA+AGG | - | chr2.4:59632675-59632694 | MS.gene003290:intron | 50.0% |
!! | GATTCGGTTCTGAAGTCCCA+TGG | - | chr2.4:59632667-59632686 | MS.gene003290:intron | 50.0% |
!! | TACTGCGGTGGCTTTATCTG+AGG | - | chr2.4:59632552-59632571 | MS.gene003290:intron | 50.0% |
!! | TTTGGCTCTGCTTACGGGTT+CGG | - | chr2.4:59634650-59634669 | MS.gene003290:intron | 50.0% |
!!! | AAGGGATGAAGGGTTTTGGG+AGG | + | chr2.4:59635091-59635110 | None:intergenic | 50.0% |
!!! | AGGGATGAAGGGTTTTGGGA+GGG | + | chr2.4:59635090-59635109 | None:intergenic | 50.0% |
AACAGTGACCTTGCCGCATC+TGG | - | chr2.4:59634296-59634315 | MS.gene003290:intron | 55.0% | |
AAGGAGCAGCAAGAGGAGAG+TGG | - | chr2.4:59632115-59632134 | MS.gene003290:CDS | 55.0% | |
ACCATTACCCGCACCAGATG+CGG | + | chr2.4:59634312-59634331 | None:intergenic | 55.0% | |
AGGAACCTCGTCTAGGAAGG+TGG | - | chr2.4:59636132-59636151 | MS.gene003290:intron | 55.0% | |
CCAACTGAGCTATGCTCACG+GGG | - | chr2.4:59634910-59634929 | MS.gene003290:CDS | 55.0% | |
CCCAACTGAGCTATGCTCAC+GGG | - | chr2.4:59634909-59634928 | MS.gene003290:CDS | 55.0% | |
CCCGTGAGCATAGCTCAGTT+GGG | + | chr2.4:59634912-59634931 | None:intergenic | 55.0% | |
CTTACGGGTTCGGAGAGAAG+GGG | - | chr2.4:59634660-59634679 | MS.gene003290:intron | 55.0% | |
GAACCTCGTCTAGGAAGGTG+GGG | - | chr2.4:59636134-59636153 | MS.gene003290:intron | 55.0% | |
GCTTACGGGTTCGGAGAGAA+GGG | - | chr2.4:59634659-59634678 | MS.gene003290:intron | 55.0% | |
GGAACCTCGTCTAGGAAGGT+GGG | - | chr2.4:59636133-59636152 | MS.gene003290:intron | 55.0% | |
GGAAGGGATAGGGAGAGCTT+TGG | + | chr2.4:59635135-59635154 | None:intergenic | 55.0% | |
GGTCGCTATTTGGCAACTGG+GGG | - | chr2.4:59632760-59632779 | MS.gene003290:intron | 55.0% | |
GTGAGCATAGCTCAGTTGGG+AGG | + | chr2.4:59634909-59634928 | None:intergenic | 55.0% | |
TCAGTGCAGTGACCGTCTGT+AGG | - | chr2.4:59634273-59634292 | MS.gene003290:intron | 55.0% | |
TGCTTACGGGTTCGGAGAGA+AGG | - | chr2.4:59634658-59634677 | MS.gene003290:intron | 55.0% | |
! | GAGAATAAGTGGGGTGTCCG+GGG | - | chr2.4:59634847-59634866 | MS.gene003290:CDS | 55.0% |
! | GGAGAATAAGTGGGGTGTCC+GGG | - | chr2.4:59634846-59634865 | MS.gene003290:CDS | 55.0% |
! | TTTGGGAGGGGATGGCTTTG+AGG | + | chr2.4:59635077-59635096 | None:intergenic | 55.0% |
!! | TTGGGAGGGGATGGCTTTGA+GGG | + | chr2.4:59635076-59635095 | None:intergenic | 55.0% |
!!! | GGGATGAAGGGTTTTGGGAG+GGG | + | chr2.4:59635089-59635108 | None:intergenic | 55.0% |
!!! | TGAAGGGTTTTGGGAGGGGA+TGG | + | chr2.4:59635085-59635104 | None:intergenic | 55.0% |
AAGGGGAGGGGAAGGCTTTG+GGG | - | chr2.4:59634677-59634696 | MS.gene003290:intron | 60.0% | |
AGAAGGGGAGGGGAAGGCTT+TGG | - | chr2.4:59634675-59634694 | MS.gene003290:intron | 60.0% | |
CCCCGTGAGCATAGCTCAGT+TGG | + | chr2.4:59634913-59634932 | None:intergenic | 60.0% | |
CCTAGTTGCTGGAGTTGGGC+AGG | - | chr2.4:59634554-59634573 | MS.gene003290:intron | 60.0% | |
CCTGCCCAACTCCAGCAACT+AGG | + | chr2.4:59634557-59634576 | None:intergenic | 60.0% | |
CTTCCCCACCTTCCTAGACG+AGG | + | chr2.4:59636140-59636159 | None:intergenic | 60.0% | |
GAAGGGGAGGGGAAGGCTTT+GGG | - | chr2.4:59634676-59634695 | MS.gene003290:intron | 60.0% | |
TGACCTTGCCGCATCTGGTG+CGG | - | chr2.4:59634301-59634320 | MS.gene003290:intron | 60.0% | |
!! | GCGCACTAGGGAGCATCTTC+AGG | - | chr2.4:59632813-59632832 | MS.gene003290:intron | 60.0% |
!! | TGGGAGGGGATGGCTTTGAG+GGG | + | chr2.4:59635075-59635094 | None:intergenic | 60.0% |
ACGGGTTCGGAGAGAAGGGG+AGG | - | chr2.4:59634663-59634682 | MS.gene003290:intron | 65.0% | |
CGGGTTCGGAGAGAAGGGGA+GGG | - | chr2.4:59634664-59634683 | MS.gene003290:intron | 65.0% | |
GACCTTGCCGCATCTGGTGC+GGG | - | chr2.4:59634302-59634321 | MS.gene003290:intron | 65.0% | |
GCCGCATCTGGTGCGGGTAA+TGG | - | chr2.4:59634308-59634327 | MS.gene003290:intron | 65.0% | |
GGGTTCGGAGAGAAGGGGAG+GGG | - | chr2.4:59634665-59634684 | MS.gene003290:intron | 65.0% | |
TACCCGCACCAGATGCGGCA+AGG | + | chr2.4:59634307-59634326 | None:intergenic | 65.0% | |
TCGGAGAGAAGGGGAGGGGA+AGG | - | chr2.4:59634669-59634688 | MS.gene003290:intron | 65.0% | |
! | AGGGGAGGGGAAGGCTTTGG+GGG | - | chr2.4:59634678-59634697 | MS.gene003290:intron | 65.0% |
!! | AGGGGAAGGCTTTGGGGGGA+TGG | - | chr2.4:59634683-59634702 | MS.gene003290:intron | 65.0% |
!! | GGGGAAGGCTTTGGGGGGAT+GGG | - | chr2.4:59634684-59634703 | MS.gene003290:intron | 65.0% |
GGTGTCCGGGGTTCGAACCC+CGG | - | chr2.4:59634859-59634878 | MS.gene003290:CDS | 70.0% | |
!! | GGGGAGGGGAAGGCTTTGGG+GGG | - | chr2.4:59634679-59634698 | MS.gene003290:intron | 70.0% |
AGGGGCCGGGGTTCGAACCC+CGG | + | chr2.4:59634867-59634886 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 59632109 | 59636214 | 59632109 | ID=MS.gene003290 |
chr2.4 | mRNA | 59632109 | 59636214 | 59632109 | ID=MS.gene003290.t1;Parent=MS.gene003290 |
chr2.4 | exon | 59636159 | 59636214 | 59636159 | ID=MS.gene003290.t1.exon1;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59636159 | 59636214 | 59636159 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
chr2.4 | exon | 59635489 | 59635828 | 59635489 | ID=MS.gene003290.t1.exon2;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59635489 | 59635828 | 59635489 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
chr2.4 | exon | 59634795 | 59635019 | 59634795 | ID=MS.gene003290.t1.exon3;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59634795 | 59635019 | 59634795 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
chr2.4 | exon | 59634335 | 59634563 | 59634335 | ID=MS.gene003290.t1.exon4;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59634335 | 59634563 | 59634335 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
chr2.4 | exon | 59633926 | 59634104 | 59633926 | ID=MS.gene003290.t1.exon5;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59633926 | 59634104 | 59633926 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
chr2.4 | exon | 59633748 | 59633813 | 59633748 | ID=MS.gene003290.t1.exon6;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59633748 | 59633813 | 59633748 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
chr2.4 | exon | 59632109 | 59632189 | 59632109 | ID=MS.gene003290.t1.exon7;Parent=MS.gene003290.t1 |
chr2.4 | CDS | 59632109 | 59632189 | 59632109 | ID=cds.MS.gene003290.t1;Parent=MS.gene003290.t1 |
Gene Sequence |
Protein sequence |