Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014393.t1 | XP_003603813.1 | 98.9 | 461 | 5 | 0 | 1 | 461 | 1 | 461 | 2.00E-255 | 891.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014393.t1 | Q06364 | 84.7 | 463 | 66 | 2 | 1 | 461 | 1 | 460 | 2.7e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014393.t1 | G7J5U6 | 98.9 | 461 | 5 | 0 | 1 | 461 | 1 | 461 | 1.4e-255 | 891.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014393.t1 | MTR_3g114480 | 98.980 | 490 | 5 | 0 | 1 | 490 | 1 | 490 | 0.0 | 1002 |
| MS.gene014393.t1 | MTR_3g114480 | 99.000 | 400 | 4 | 0 | 91 | 490 | 54 | 453 | 0.0 | 825 |
| MS.gene014393.t1 | MTR_3g114480 | 97.549 | 408 | 10 | 0 | 83 | 490 | 16 | 423 | 0.0 | 825 |
| MS.gene014393.t1 | MTR_1g026030 | 85.567 | 485 | 56 | 5 | 1 | 482 | 1 | 474 | 0.0 | 792 |
| MS.gene014393.t1 | MTR_1g107545 | 51.500 | 200 | 33 | 4 | 138 | 337 | 25 | 160 | 4.91e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014393.t1 | AT1G20200 | 82.653 | 490 | 83 | 1 | 1 | 490 | 1 | 488 | 0.0 | 810 |
| MS.gene014393.t1 | AT1G75990 | 81.633 | 490 | 87 | 1 | 1 | 490 | 1 | 487 | 0.0 | 785 |
Find 102 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGATCTGGCTGAAATTC+GGG | 0.287672 | 3.2:-90616723 | MS.gene014393:CDS |
| GGCTGTCCGCATTGGAGATT+TGG | 0.288995 | 3.2:-90614403 | MS.gene014393:CDS |
| TTGGAGATTTGGAGCTGTTT+AGG | 0.292663 | 3.2:-90614392 | MS.gene014393:CDS |
| CTCGATCATGTTCTCACTCC+TGG | 0.302582 | 3.2:-90618067 | MS.gene014393:CDS |
| TCATATAGCCATGAACTTAC+TGG | 0.313557 | 3.2:-90616743 | MS.gene014393:CDS |
| GAGCTTTACGAGCAGCTTGC+AGG | 0.339070 | 3.2:+90616048 | None:intergenic |
| CTGGAGATCTGGCTGAAATT+CGG | 0.352735 | 3.2:-90616724 | MS.gene014393:CDS |
| CCAGATCTCCAGTAAGTTCA+TGG | 0.361028 | 3.2:+90616735 | None:intergenic |
| CGAAAACCCCGAGCTGCAAC+TGG | 0.373967 | 3.2:+90616026 | None:intergenic |
| GAAAATTCGGACTATTCAAT+TGG | 0.381260 | 3.2:-90616096 | MS.gene014393:CDS |
| TCAGCATCAGCAACAGGATT+TGG | 0.384636 | 3.2:+90614207 | None:intergenic |
| TCTTCTACCTCGGGAAAATT+CGG | 0.396222 | 3.2:-90616109 | MS.gene014393:CDS |
| TAAAGCTCCAGTTGCAGCTC+GGG | 0.397705 | 3.2:-90616033 | MS.gene014393:CDS |
| TTCTTACGCTGCAAAGTAGA+TGG | 0.406026 | 3.2:+90618295 | None:intergenic |
| ATCATAGTGCGTTTACTGTT+GGG | 0.406603 | 3.2:-90615981 | MS.gene014393:CDS |
| CACTCTTCGCCATGATGAGT+TGG | 0.420792 | 3.2:-90616560 | MS.gene014393:CDS |
| ATCCTCCTCTGCAATATGTT+TGG | 0.422847 | 3.2:+90613927 | None:intergenic |
| GTTCTTCAGCTAGTGTTGCT+TGG | 0.427729 | 3.2:-90616826 | MS.gene014393:CDS |
| ACTTCTCTGCCTGGTCATAT+AGG | 0.427888 | 3.2:+90616411 | None:intergenic |
| ATTGTGATTCATAGATTTGA+AGG | 0.432257 | 3.2:-90618209 | MS.gene014393:intron |
| TGTCGTTATCTCTTCTACCT+CGG | 0.432513 | 3.2:-90616119 | MS.gene014393:CDS |
| GTCGTTATCTCTTCTACCTC+GGG | 0.434794 | 3.2:-90616118 | MS.gene014393:CDS |
| CCATGAACTTACTGGAGATC+TGG | 0.437963 | 3.2:-90616735 | MS.gene014393:CDS |
| TAACAGTAAATTTCTAGCTC+AGG | 0.444215 | 3.2:+90616993 | None:intergenic |
| AAATGGGTGGATGGTGTCTA+AGG | 0.451020 | 3.2:-90614127 | MS.gene014393:CDS |
| TTGACCTCAACTTCTCTGCC+TGG | 0.452207 | 3.2:+90616402 | None:intergenic |
| TCGCCATGATGAGTTGGGTC+AGG | 0.453949 | 3.2:-90616554 | MS.gene014393:intron |
| ATGCTCTCAGCATCAGCAAC+AGG | 0.456927 | 3.2:+90614201 | None:intergenic |
| TATCATAGTGCGTTTACTGT+TGG | 0.459477 | 3.2:-90615982 | MS.gene014393:CDS |
| TGGATGGTGTCTAAGGAAAC+AGG | 0.461685 | 3.2:-90614120 | MS.gene014393:CDS |
| ACTAGCTGAAGAACAAGCTT+TGG | 0.471713 | 3.2:+90616835 | None:intergenic |
| AGTGTTTAGCTGTAGGGGTA+GGG | 0.475084 | 3.2:+90617021 | None:intergenic |
| GTGTTTAGCTGTAGGGGTAG+GGG | 0.484533 | 3.2:+90617022 | None:intergenic |
| TGCGAAGCAGCAAATTAAGA+AGG | 0.487151 | 3.2:+90616450 | None:intergenic |
| GCAACAAGTGTTTAGCTGTA+GGG | 0.489547 | 3.2:+90617015 | None:intergenic |
| AACTTCCTTCGAGTAAGAAC+CGG | 0.493423 | 3.2:+90618165 | None:intergenic |
| GCTACATTGGATCATGCAAA+TGG | 0.497010 | 3.2:-90614144 | MS.gene014393:CDS |
| CTGTCGATGTTATTGCATCT+AGG | 0.500017 | 3.2:-90616781 | MS.gene014393:CDS |
| AGATGGAACTTGTGGAGAAA+CGG | 0.500179 | 3.2:+90618312 | None:intergenic |
| CTCCACGCATGAGCCTCAGC+TGG | 0.501442 | 3.2:-90614088 | MS.gene014393:CDS |
| GTCTCCGACATAATGTCATC+AGG | 0.501605 | 3.2:-90614308 | MS.gene014393:CDS |
| ACTCTTCGCCATGATGAGTT+GGG | 0.503587 | 3.2:-90616559 | MS.gene014393:CDS |
| ACAACAGCAAGAGCAGGAAC+TGG | 0.505747 | 3.2:-90613950 | MS.gene014393:CDS |
| GAATTCCAGGCTGTCCGCAT+TGG | 0.508181 | 3.2:-90614411 | MS.gene014393:intron |
| GTGTCGAAGGCTATTCGTGA+TGG | 0.511320 | 3.2:-90614177 | MS.gene014393:CDS |
| ACATTTGTAAGCTCAAAGTA+AGG | 0.517576 | 3.2:+90615903 | None:intergenic |
| ATGAGTTCCGTCTGCACTGA+AGG | 0.520485 | 3.2:+90614344 | None:intergenic |
| GTAAAGCTCCAGTTGCAGCT+CGG | 0.520793 | 3.2:-90616034 | MS.gene014393:CDS |
| TGTCGAAGGCTATTCGTGAT+GGG | 0.522093 | 3.2:-90614176 | MS.gene014393:CDS |
| GTAAGAACCGGTCTCAATAA+CGG | 0.524017 | 3.2:+90618177 | None:intergenic |
| AGAGAGACAACAGCAAGAGC+AGG | 0.524456 | 3.2:-90613956 | MS.gene014393:CDS |
| GAAACCTACTTGCATTGCAT+CGG | 0.524818 | 3.2:-90616588 | MS.gene014393:CDS |
| GGAGGATGATCATGAGATGG+AGG | 0.525489 | 3.2:-90617072 | MS.gene014393:CDS |
| AAGTGTTTAGCTGTAGGGGT+AGG | 0.526202 | 3.2:+90617020 | None:intergenic |
| AGCTAGTGAGATGCGAGAAT+AGG | 0.527722 | 3.2:+90614260 | None:intergenic |
| ATTGTGCATGTTAAGACAGA+AGG | 0.528644 | 3.2:+90614047 | None:intergenic |
| TGAAGCACATTCAAACCAGC+AGG | 0.534748 | 3.2:-90616366 | MS.gene014393:intron |
| CGAACTGTCTTTATGCAGAA+AGG | 0.537836 | 3.2:-90615945 | MS.gene014393:CDS |
| TGTAGGGGTAGGGGTTTGAA+TGG | 0.543905 | 3.2:+90617031 | None:intergenic |
| TTCGAATTCAATGTAACAAG+TGG | 0.544110 | 3.2:-90616007 | MS.gene014393:CDS |
| TGCATAAAGACAGTTCGCTC+AGG | 0.545859 | 3.2:+90615951 | None:intergenic |
| CGACATAATGTCATCAGGAC+TGG | 0.551358 | 3.2:-90614303 | MS.gene014393:CDS |
| GGCAGAGAAGTTGAGGTCAA+AGG | 0.552276 | 3.2:-90616399 | MS.gene014393:CDS |
| GGCAACAAGTGTTTAGCTGT+AGG | 0.555242 | 3.2:+90617014 | None:intergenic |
| TGTCTTTATGCAGAAAGGAA+TGG | 0.555289 | 3.2:-90615940 | MS.gene014393:CDS |
| AAACCTGACCCAACTCATCA+TGG | 0.555876 | 3.2:+90616551 | None:intergenic |
| TTAGCATGAGGTTCAGAACC+AGG | 0.559671 | 3.2:+90618049 | None:intergenic |
| GCGAAGCAGCAAATTAAGAA+GGG | 0.562737 | 3.2:+90616451 | None:intergenic |
| TGCTGAGAGCATTGTGTCGA+AGG | 0.568158 | 3.2:-90614190 | MS.gene014393:CDS |
| GGATGATCATGAGATGGAGG+TGG | 0.570304 | 3.2:-90617069 | MS.gene014393:CDS |
| TCGAATTCAATGTAACAAGT+GGG | 0.570948 | 3.2:-90616006 | MS.gene014393:CDS |
| ATGACCAGGCAGAGAAGTTG+AGG | 0.578368 | 3.2:-90616406 | MS.gene014393:CDS |
| ATAGGAGGATGATCATGAGA+TGG | 0.579908 | 3.2:-90617075 | MS.gene014393:intron |
| CAACAAGTGTTTAGCTGTAG+GGG | 0.588492 | 3.2:+90617016 | None:intergenic |
| ATAGCGTCCGTTATTGAGAC+CGG | 0.589430 | 3.2:-90618184 | MS.gene014393:CDS |
| GGCCAAACATATTGCAGAGG+AGG | 0.589837 | 3.2:-90613929 | MS.gene014393:CDS |
| CAACTCATCATGGCGAAGAG+TGG | 0.590059 | 3.2:+90616561 | None:intergenic |
| GCAACCACCTTCAGTGCAGA+CGG | 0.594746 | 3.2:-90614351 | MS.gene014393:CDS |
| TGGGGCAATTGATGCTACAT+TGG | 0.595169 | 3.2:-90614157 | MS.gene014393:CDS |
| CTACATTGGATCATGCAAAT+GGG | 0.597867 | 3.2:-90614143 | MS.gene014393:CDS |
| CAATCCGATGCAATGCAAGT+AGG | 0.600803 | 3.2:+90616584 | None:intergenic |
| AAAGCTCCAGTTGCAGCTCG+GGG | 0.611705 | 3.2:-90616032 | MS.gene014393:CDS |
| TACGCAGACAATTTAGCATG+AGG | 0.613498 | 3.2:+90618037 | None:intergenic |
| AGCCAGCTGAGGCTCATGCG+TGG | 0.615404 | 3.2:+90614086 | None:intergenic |
| GGTTTGAATGGAAGATGTTG+TGG | 0.620968 | 3.2:+90617043 | None:intergenic |
| GGATCATGCAAATGGGTGGA+TGG | 0.621270 | 3.2:-90614136 | MS.gene014393:CDS |
| TTTGAATGTGCTTCAAATCG+TGG | 0.621618 | 3.2:+90616374 | None:intergenic |
| TGAGACCGGTTCTTACTCGA+AGG | 0.622392 | 3.2:-90618170 | MS.gene014393:CDS |
| ATTGTCTGCGTATCTTCCCA+AGG | 0.623168 | 3.2:-90618026 | MS.gene014393:intron |
| GGAGATCTGGCTGAAATTCG+GGG | 0.623695 | 3.2:-90616722 | MS.gene014393:CDS |
| TGCAAAGTAGATGGAACTTG+TGG | 0.628606 | 3.2:+90618304 | None:intergenic |
| CGAGAATTGAAAGCCAGCTG+AGG | 0.642823 | 3.2:+90614075 | None:intergenic |
| GTCGAAGGCTATTCGTGATG+GGG | 0.643333 | 3.2:-90614175 | MS.gene014393:CDS |
| CAGTCCTGATGACATTATGT+CGG | 0.646136 | 3.2:+90614304 | None:intergenic |
| TCACTACAACCTATATGACC+AGG | 0.647246 | 3.2:-90616420 | MS.gene014393:CDS |
| TGTGGAGAAACGGAATTCGA+AGG | 0.647707 | 3.2:+90618322 | None:intergenic |
| TTCGTCTTACAATTGCATTG+AGG | 0.658485 | 3.2:-90618123 | MS.gene014393:CDS |
| GAGATCTGGCTGAAATTCGG+GGG | 0.660656 | 3.2:-90616721 | MS.gene014393:intron |
| CATTGGATCATGCAAATGGG+TGG | 0.661664 | 3.2:-90614140 | MS.gene014393:CDS |
| AGTTCCGTCTGCACTGAAGG+TGG | 0.692083 | 3.2:+90614347 | None:intergenic |
| ACTGGCCAAACATATTGCAG+AGG | 0.692977 | 3.2:-90613932 | MS.gene014393:CDS |
| ACAGCTCCAAATCTCCAATG+CGG | 0.755080 | 3.2:+90614397 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATTATAGATTCAAT+TGG | + | chr3.2:90617595-90617614 | None:intergenic | 10.0% |
| !!! | CTTTTTTAATAAAGAAAAAT+TGG | + | chr3.2:90616856-90616875 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTGTACTTTT+TGG | - | chr3.2:90616038-90616057 | MS.gene014393:CDS | 10.0% |
| !! | AATTCTTAATCTAAATTACT+AGG | - | chr3.2:90614964-90614983 | MS.gene014393:intron | 15.0% |
| !! | ATATATTATTATGACAAACA+AGG | + | chr3.2:90616413-90616432 | None:intergenic | 15.0% |
| !! | ATTAAAAAAGTCAAAACAAA+GGG | - | chr3.2:90616866-90616885 | MS.gene014393:intron | 15.0% |
| !! | GTAATTTAGATTAAGAATTA+AGG | + | chr3.2:90614963-90614982 | None:intergenic | 15.0% |
| !! | TAATTATTAATGTTATCTCA+AGG | - | chr3.2:90617605-90617624 | MS.gene014393:intron | 15.0% |
| !! | TATTAAAAAAGTCAAAACAA+AGG | - | chr3.2:90616865-90616884 | MS.gene014393:intron | 15.0% |
| !! | TCTATATAATCAATAAATCA+AGG | - | chr3.2:90615591-90615610 | MS.gene014393:intron | 15.0% |
| !!! | AAATGCATAAAATATTCTTT+TGG | + | chr3.2:90617692-90617711 | None:intergenic | 15.0% |
| !!! | TGTCTGATTTTTTATATTTT+AGG | - | chr3.2:90615412-90615431 | MS.gene014393:intron | 15.0% |
| !!! | TTTTTTTTGTTGGTTATTTA+GGG | - | chr3.2:90614397-90614416 | MS.gene014393:CDS | 15.0% |
| !! | ATATAATCAATAAATCAAGG+AGG | - | chr3.2:90615594-90615613 | MS.gene014393:intron | 20.0% |
| !! | CAAAATTCACAAATTGAAAA+CGG | + | chr3.2:90614039-90614058 | None:intergenic | 20.0% |
| !! | CTAACAAACATCTAATTTAT+AGG | + | chr3.2:90616805-90616824 | None:intergenic | 20.0% |
| !! | GATAAGTTATAACTAAAAAG+TGG | + | chr3.2:90616551-90616570 | None:intergenic | 20.0% |
| !! | GCAACAATTAACTATATTTA+GGG | + | chr3.2:90617439-90617458 | None:intergenic | 20.0% |
| !! | GTAGTTTCAATTAAGAATTA+GGG | + | chr3.2:90614576-90614595 | None:intergenic | 20.0% |
| !! | TAAACACTTAAATGATAATC+AGG | - | chr3.2:90614898-90614917 | MS.gene014393:intron | 20.0% |
| !! | TAAACTCTTAATCTCTTTAA+TGG | + | chr3.2:90617281-90617300 | None:intergenic | 20.0% |
| !! | TAACTTAGATTTAGCATTTA+GGG | - | chr3.2:90614286-90614305 | MS.gene014393:CDS | 20.0% |
| !! | TATCTTCATCAGAAAATATT+AGG | - | chr3.2:90615102-90615121 | MS.gene014393:intron | 20.0% |
| !! | TGAGAGATAGAAAATAAATA+AGG | - | chr3.2:90617391-90617410 | MS.gene014393:intron | 20.0% |
| !! | TTAAAAAAGTCAAAACAAAG+GGG | - | chr3.2:90616867-90616886 | MS.gene014393:intron | 20.0% |
| !! | TTAACTTAGATTTAGCATTT+AGG | - | chr3.2:90614285-90614304 | MS.gene014393:CDS | 20.0% |
| !!! | AACTTGTTTAAATCTTTTTG+TGG | - | chr3.2:90615645-90615664 | MS.gene014393:intron | 20.0% |
| !!! | AGAATATTTTATGCATTTGT+TGG | - | chr3.2:90617694-90617713 | MS.gene014393:intron | 20.0% |
| !!! | GAGAAGATTTTTTTATGTTA+GGG | - | chr3.2:90615756-90615775 | MS.gene014393:intron | 20.0% |
| !!! | GAGTACTTTTTGTATATAAA+TGG | - | chr3.2:90617064-90617083 | MS.gene014393:CDS | 20.0% |
| !!! | GATGAATTAGTTTTTTTTGT+TGG | - | chr3.2:90614387-90614406 | MS.gene014393:CDS | 20.0% |
| !!! | GTTTTTTTTGTTGGTTATTT+AGG | - | chr3.2:90614396-90614415 | MS.gene014393:CDS | 20.0% |
| !!! | TTTTTGAATGTTCTAAATAC+AGG | - | chr3.2:90617237-90617256 | MS.gene014393:intron | 20.0% |
| ! | AAACACTCCTAAAAAATAAG+CGG | + | chr3.2:90616647-90616666 | None:intergenic | 25.0% |
| ! | AAGGAGTAAGAATTAACAAA+AGG | + | chr3.2:90616091-90616110 | None:intergenic | 25.0% |
| ! | AATACTCCATAAAAACTAGT+CGG | + | chr3.2:90616498-90616517 | None:intergenic | 25.0% |
| ! | AATAGTCCTAAACAATAAGT+GGG | - | chr3.2:90616740-90616759 | MS.gene014393:CDS | 25.0% |
| ! | AATTCTTAATTGAAACTACG+AGG | - | chr3.2:90614577-90614596 | MS.gene014393:intron | 25.0% |
| ! | ACAAACATCTAATTTATAGG+TGG | + | chr3.2:90616802-90616821 | None:intergenic | 25.0% |
| ! | ACTACTACTAAAAAAAGAAG+TGG | - | chr3.2:90616580-90616599 | MS.gene014393:CDS | 25.0% |
| ! | AGCAAGTTAAAACTAAAAAG+TGG | + | chr3.2:90616718-90616737 | None:intergenic | 25.0% |
| ! | ATAAGCATTTCATTACATCT+CGG | + | chr3.2:90617145-90617164 | None:intergenic | 25.0% |
| ! | ATTCTTAATTGAAACTACGA+GGG | - | chr3.2:90614578-90614597 | MS.gene014393:intron | 25.0% |
| ! | ATTGTGATTCATAGATTTGA+AGG | - | chr3.2:90614061-90614080 | MS.gene014393:CDS | 25.0% |
| ! | CAAACATCTAATTTATAGGT+GGG | + | chr3.2:90616801-90616820 | None:intergenic | 25.0% |
| ! | CAAGAAAGAAAAAAAGCTAA+CGG | + | chr3.2:90614708-90614727 | None:intergenic | 25.0% |
| ! | CGCAACAATTAACTATATTT+AGG | + | chr3.2:90617440-90617459 | None:intergenic | 25.0% |
| ! | CGTAGTTTCAATTAAGAATT+AGG | + | chr3.2:90614577-90614596 | None:intergenic | 25.0% |
| ! | CTACTACTAAAAAAAGAAGT+GGG | - | chr3.2:90616581-90616600 | MS.gene014393:CDS | 25.0% |
| ! | GAAGAAAGAAAATGGTTTAT+TGG | - | chr3.2:90617459-90617478 | MS.gene014393:intron | 25.0% |
| ! | GATTAAGAATTAAGGATGTT+TGG | + | chr3.2:90614955-90614974 | None:intergenic | 25.0% |
| ! | TAAATCTACCATTGCATTTA+GGG | - | chr3.2:90614365-90614384 | MS.gene014393:CDS | 25.0% |
| ! | TATAGCAAATAACACAAGTA+TGG | + | chr3.2:90617809-90617828 | None:intergenic | 25.0% |
| ! | TGAAAACATAAAAGCAATAC+AGG | + | chr3.2:90615356-90615375 | None:intergenic | 25.0% |
| ! | TTAAATCTACCATTGCATTT+AGG | - | chr3.2:90614364-90614383 | MS.gene014393:CDS | 25.0% |
| !! | ATAAAATATTCTTTTGGCAC+AGG | + | chr3.2:90617686-90617705 | None:intergenic | 25.0% |
| !! | ATTTTCATAACCTATCATAG+AGG | + | chr3.2:90614834-90614853 | None:intergenic | 25.0% |
| !! | ATTTTCTGATGAAGATAGAA+AGG | + | chr3.2:90615099-90615118 | None:intergenic | 25.0% |
| !! | CGTTTTCAATTTGTGAATTT+TGG | - | chr3.2:90614037-90614056 | MS.gene014393:CDS | 25.0% |
| !! | GACTATTTTCATACAGTTTA+TGG | + | chr3.2:90614491-90614510 | None:intergenic | 25.0% |
| !! | GTTTTCTATGATTGCATTTA+GGG | - | chr3.2:90614676-90614695 | MS.gene014393:intron | 25.0% |
| !! | TCATTTGTTAATTCTCCATT+TGG | - | chr3.2:90617779-90617798 | MS.gene014393:intron | 25.0% |
| !! | TGTTTTCTATGATTGCATTT+AGG | - | chr3.2:90614675-90614694 | MS.gene014393:intron | 25.0% |
| !! | TTTTCTGATGAAGATAGAAA+GGG | + | chr3.2:90615098-90615117 | None:intergenic | 25.0% |
| !!! | AATTTTGTCACTGATTGTAT+AGG | - | chr3.2:90615177-90615196 | MS.gene014393:intron | 25.0% |
| !!! | GGAGAAGATTTTTTTATGTT+AGG | - | chr3.2:90615755-90615774 | MS.gene014393:intron | 25.0% |
| !!! | TACAAAAAGTACTCATCATT+TGG | + | chr3.2:90617058-90617077 | None:intergenic | 25.0% |
| AAAGAAAGATGACAATGTGA+AGG | + | chr3.2:90616976-90616995 | None:intergenic | 30.0% | |
| AACACTCCTAAAAAATAAGC+GGG | + | chr3.2:90616646-90616665 | None:intergenic | 30.0% | |
| AATCAATAAGCTTCATCACA+AGG | + | chr3.2:90616018-90616037 | None:intergenic | 30.0% | |
| ACAAATGTAAGTCCACATTA+TGG | - | chr3.2:90616382-90616401 | MS.gene014393:CDS | 30.0% | |
| ACATTTGTAAGCTCAAAGTA+AGG | + | chr3.2:90616370-90616389 | None:intergenic | 30.0% | |
| ATCAATAAGCTTCATCACAA+GGG | + | chr3.2:90616017-90616036 | None:intergenic | 30.0% | |
| ATTAACACAAGTTTGTACCT+TGG | + | chr3.2:90614264-90614283 | None:intergenic | 30.0% | |
| ATTCCTTCTCAGATAAACTA+TGG | + | chr3.2:90617538-90617557 | None:intergenic | 30.0% | |
| ATTGTTGCGAAGAAAGAAAA+TGG | - | chr3.2:90617451-90617470 | MS.gene014393:intron | 30.0% | |
| CAATAGTCCTAAACAATAAG+TGG | - | chr3.2:90616739-90616758 | MS.gene014393:CDS | 30.0% | |
| GAAAATTCGGACTATTCAAT+TGG | - | chr3.2:90616174-90616193 | MS.gene014393:intron | 30.0% | |
| TAATTCATCCCTAAATGCAA+TGG | + | chr3.2:90614376-90614395 | None:intergenic | 30.0% | |
| TCGAATTCAATGTAACAAGT+GGG | - | chr3.2:90616264-90616283 | MS.gene014393:intron | 30.0% | |
| TGATCAGAAAAAATACAACG+AGG | - | chr3.2:90615324-90615343 | MS.gene014393:intron | 30.0% | |
| TTAACACAAGTTTGTACCTT+GGG | + | chr3.2:90614263-90614282 | None:intergenic | 30.0% | |
| TTAGAAACTGTTAACTGAAG+TGG | - | chr3.2:90616666-90616685 | MS.gene014393:intron | 30.0% | |
| TTCGAATTCAATGTAACAAG+TGG | - | chr3.2:90616263-90616282 | MS.gene014393:intron | 30.0% | |
| TTCTTAATTGAAACTACGAG+GGG | - | chr3.2:90614579-90614598 | MS.gene014393:intron | 30.0% | |
| ! | ATGTTTTCAACTATGCAAAC+TGG | - | chr3.2:90615367-90615386 | MS.gene014393:intron | 30.0% |
| ! | CACCTTTTAATGTTATCTCA+AGG | - | chr3.2:90617512-90617531 | MS.gene014393:intron | 30.0% |
| ! | CACTTATTGTTTAGGACTAT+TGG | + | chr3.2:90616741-90616760 | None:intergenic | 30.0% |
| ! | GACTTTTTGACAGATCTTTT+AGG | - | chr3.2:90614784-90614803 | MS.gene014393:intron | 30.0% |
| ! | TCTTTTTCTTTGTGTGTGTT+TGG | + | chr3.2:90618276-90618295 | None:intergenic | 30.0% |
| ! | TGTTAGTTTAGCTTATGTTG+TGG | - | chr3.2:90617837-90617856 | MS.gene014393:intron | 30.0% |
| ! | TTCACTATTTTCTGAGCATT+TGG | + | chr3.2:90617035-90617054 | None:intergenic | 30.0% |
| ! | TTTTCTTCAACAATTGAGCT+AGG | + | chr3.2:90617005-90617024 | None:intergenic | 30.0% |
| !! | TAACAGTAAATTTCTAGCTC+AGG | + | chr3.2:90615280-90615299 | None:intergenic | 30.0% |
| !!! | GGTTCTATTTTTTCAGTCTT+TGG | - | chr3.2:90617715-90617734 | MS.gene014393:intron | 30.0% |
| !!! | TTCTCTTCCTTTGTTTTTGA+CGG | - | chr3.2:90615128-90615147 | MS.gene014393:intron | 30.0% |
| !!! | TTTACACCCGCTTATTTTTT+AGG | - | chr3.2:90616637-90616656 | MS.gene014393:intron | 30.0% |
| AAAGTCACAAGCAGTAAATG+GGG | + | chr3.2:90615017-90615036 | None:intergenic | 35.0% | |
| AACAAGGTTGAACCATAATG+TGG | + | chr3.2:90616397-90616416 | None:intergenic | 35.0% | |
| AACCTATCATAGAGGACTTA+TGG | + | chr3.2:90614826-90614845 | None:intergenic | 35.0% | |
| AAGTGTTTATGTCAGGAGAT+AGG | + | chr3.2:90614760-90614779 | None:intergenic | 35.0% | |
| ACAAAGTCACAAGCAGTAAA+TGG | + | chr3.2:90615019-90615038 | None:intergenic | 35.0% | |
| ACACTTGTGGAAACAACTTA+AGG | - | chr3.2:90614460-90614479 | MS.gene014393:intron | 35.0% | |
| ATAAAAACTAGTCGGTGTAG+TGG | + | chr3.2:90616490-90616509 | None:intergenic | 35.0% | |
| ATCATAGTGCGTTTACTGTT+GGG | - | chr3.2:90616289-90616308 | MS.gene014393:intron | 35.0% | |
| ATGAAGATAGAAAGGGAAAG+AGG | + | chr3.2:90615091-90615110 | None:intergenic | 35.0% | |
| ATTGTGCATGTTAAGACAGA+AGG | + | chr3.2:90618226-90618245 | None:intergenic | 35.0% | |
| CAAAGTCACAAGCAGTAAAT+GGG | + | chr3.2:90615018-90615037 | None:intergenic | 35.0% | |
| CAACCTTTCTTGCACAATTT+AGG | - | chr3.2:90617643-90617662 | MS.gene014393:intron | 35.0% | |
| CACAAGTATGGATATCCAAA+TGG | + | chr3.2:90617797-90617816 | None:intergenic | 35.0% | |
| CTACATTGGATCATGCAAAT+GGG | - | chr3.2:90618127-90618146 | MS.gene014393:CDS | 35.0% | |
| CTATTTCCCGTCAAAAACAA+AGG | + | chr3.2:90615138-90615157 | None:intergenic | 35.0% | |
| CTGATGTTGCTAAAAAGTTG+AGG | - | chr3.2:90618031-90618050 | MS.gene014393:CDS | 35.0% | |
| CTTACCTGTTGATGTATTTC+AGG | - | chr3.2:90615793-90615812 | MS.gene014393:intron | 35.0% | |
| GGCAAATAATTGAATGCTCA+TGG | - | chr3.2:90615388-90615407 | MS.gene014393:intron | 35.0% | |
| GGCCTTGAGATAACATTAAA+AGG | + | chr3.2:90617517-90617536 | None:intergenic | 35.0% | |
| GGTTTATTGGTCCATGTAAA+AGG | - | chr3.2:90617472-90617491 | MS.gene014393:intron | 35.0% | |
| GTATTCTAGCAAATGCCTAT+GGG | - | chr3.2:90616605-90616624 | MS.gene014393:intron | 35.0% | |
| GTTATTTAGGGATGTTTGGA+TGG | - | chr3.2:90614409-90614428 | MS.gene014393:intron | 35.0% | |
| GTTGGTTATTTAGGGATGTT+TGG | - | chr3.2:90614405-90614424 | MS.gene014393:CDS | 35.0% | |
| GTTTCCTGAAATACATCAAC+AGG | + | chr3.2:90615800-90615819 | None:intergenic | 35.0% | |
| TATCATAGTGCGTTTACTGT+TGG | - | chr3.2:90616288-90616307 | MS.gene014393:intron | 35.0% | |
| TCAGAAAAAGTAGTACAAGC+AGG | + | chr3.2:90615303-90615322 | None:intergenic | 35.0% | |
| TCAGGTTTGTGTTCTACTTA+TGG | - | chr3.2:90615734-90615753 | MS.gene014393:intron | 35.0% | |
| TCATATAGCCATGAACTTAC+TGG | - | chr3.2:90615527-90615546 | MS.gene014393:intron | 35.0% | |
| TGAAGATAGAAAGGGAAAGA+GGG | + | chr3.2:90615090-90615109 | None:intergenic | 35.0% | |
| TGAGATGTGAAATCGATAGA+CGG | + | chr3.2:90614004-90614023 | None:intergenic | 35.0% | |
| TGTAAATTAGTAGCTCCCAT+AGG | + | chr3.2:90616623-90616642 | None:intergenic | 35.0% | |
| TGTATTCTAGCAAATGCCTA+TGG | - | chr3.2:90616604-90616623 | MS.gene014393:intron | 35.0% | |
| TGTCTTTATGCAGAAAGGAA+TGG | - | chr3.2:90616330-90616349 | MS.gene014393:intron | 35.0% | |
| TGTTGCTAAAAAGTTGAGGT+TGG | - | chr3.2:90618035-90618054 | MS.gene014393:CDS | 35.0% | |
| TTCCATAAGTCCTCTATGAT+AGG | - | chr3.2:90614821-90614840 | MS.gene014393:intron | 35.0% | |
| TTCGTCTTACAATTGCATTG+AGG | - | chr3.2:90614147-90614166 | MS.gene014393:CDS | 35.0% | |
| TTGGAGGAAGATGAAACAAT+GGG | + | chr3.2:90616946-90616965 | None:intergenic | 35.0% | |
| TTTGAATGTGCTTCAAATCG+TGG | + | chr3.2:90615899-90615918 | None:intergenic | 35.0% | |
| ! | AAATATTCTTTTGGCACAGG+TGG | + | chr3.2:90617683-90617702 | None:intergenic | 35.0% |
| ! | ACGAATTTCTTTTGTGCTCA+TGG | + | chr3.2:90615946-90615965 | None:intergenic | 35.0% |
| ! | GAATGTTCTAAATACAGGTG+TGG | - | chr3.2:90617242-90617261 | MS.gene014393:intron | 35.0% |
| ! | TACTTGCAACTTTTGCAACA+TGG | - | chr3.2:90614634-90614653 | MS.gene014393:intron | 35.0% |
| ! | TTTGTCACTGATTGTATAGG+AGG | - | chr3.2:90615180-90615199 | MS.gene014393:intron | 35.0% |
| ! | TTTTAGCAACATGCACCTTA+GGG | - | chr3.2:90616516-90616535 | MS.gene014393:intron | 35.0% |
| ! | TTTTCTTCATCCATGTGTTG+TGG | + | chr3.2:90617094-90617113 | None:intergenic | 35.0% |
| ! | TTTTCTTTGTGTGTGTTTGG+TGG | + | chr3.2:90618273-90618292 | None:intergenic | 35.0% |
| ! | TTTTTGACGGGAAATAGCAA+TGG | - | chr3.2:90615141-90615160 | MS.gene014393:intron | 35.0% |
| !! | ATTTTAGCAACATGCACCTT+AGG | - | chr3.2:90616515-90616534 | MS.gene014393:intron | 35.0% |
| !! | GAGCACTGGAATAAAAAGTA+TGG | + | chr3.2:90615976-90615995 | None:intergenic | 35.0% |
| !! | TCTTTCTTGTTCTGCTGTTT+TGG | - | chr3.2:90614719-90614738 | MS.gene014393:intron | 35.0% |
| !!! | ACTACACCGACTAGTTTTTA+TGG | - | chr3.2:90616489-90616508 | MS.gene014393:intron | 35.0% |
| !!! | CTTTCTTGTTCTGCTGTTTT+GGG | - | chr3.2:90614720-90614739 | MS.gene014393:intron | 35.0% |
| !!! | GGAAAAAGGTGCTTTTTTCT+GGG | + | chr3.2:90617332-90617351 | None:intergenic | 35.0% |
| !!! | TCTCTTCCTTTGTTTTTGAC+GGG | - | chr3.2:90615129-90615148 | MS.gene014393:intron | 35.0% |
| AACTTCCTTCGAGTAAGAAC+CGG | + | chr3.2:90614108-90614127 | None:intergenic | 40.0% | |
| AAGTGGTTAAATGCACCCTA+AGG | + | chr3.2:90616534-90616553 | None:intergenic | 40.0% | |
| AAGTGGTTAAATGCACCTCA+AGG | - | chr3.2:90616683-90616702 | MS.gene014393:intron | 40.0% | |
| ACTAGCTGAAGAACAAGCTT+TGG | + | chr3.2:90615438-90615457 | None:intergenic | 40.0% | |
| ACTTATTTGAGCTTGCCTAC+TGG | - | chr3.2:90614432-90614451 | MS.gene014393:intron | 40.0% | |
| AGAACAAGTGTGCACATGAA+AGG | + | chr3.2:90616110-90616129 | None:intergenic | 40.0% | |
| AGATGGAACTTGTGGAGAAA+CGG | + | chr3.2:90613961-90613980 | None:intergenic | 40.0% | |
| AGCTTATGTTGTGGAATTCC+AGG | - | chr3.2:90617846-90617865 | MS.gene014393:intron | 40.0% | |
| AGGCCATAGTTTATCTGAGA+AGG | - | chr3.2:90617532-90617551 | MS.gene014393:intron | 40.0% | |
| ATAGGAGGATGATCATGAGA+TGG | - | chr3.2:90615195-90615214 | MS.gene014393:intron | 40.0% | |
| ATCCTCCTCTGCAATATGTT+TGG | + | chr3.2:90618346-90618365 | None:intergenic | 40.0% | |
| ATCTTGTCCAACTAACGTGT+TGG | + | chr3.2:90616831-90616850 | None:intergenic | 40.0% | |
| CAACAAGTGTTTAGCTGTAG+GGG | + | chr3.2:90615257-90615276 | None:intergenic | 40.0% | |
| CAGTCCTGATGACATTATGT+CGG | + | chr3.2:90617969-90617988 | None:intergenic | 40.0% | |
| CGAACTGTCTTTATGCAGAA+AGG | - | chr3.2:90616325-90616344 | MS.gene014393:intron | 40.0% | |
| CGATTTCCCAGTGGAAAAAA+CGG | + | chr3.2:90617358-90617377 | None:intergenic | 40.0% | |
| CGTACACCCACTTATTGTTT+AGG | + | chr3.2:90616749-90616768 | None:intergenic | 40.0% | |
| CTAGTTTAACGATTTCCCAG+TGG | + | chr3.2:90617367-90617386 | None:intergenic | 40.0% | |
| CTGTCGATGTTATTGCATCT+AGG | - | chr3.2:90615489-90615508 | MS.gene014393:intron | 40.0% | |
| CTTCAACAATTGAGCTAGGA+AGG | + | chr3.2:90617001-90617020 | None:intergenic | 40.0% | |
| GAAACCTACTTGCATTGCAT+CGG | - | chr3.2:90615682-90615701 | MS.gene014393:intron | 40.0% | |
| GAAAGATGACAATGTGAAGG+AGG | + | chr3.2:90616973-90616992 | None:intergenic | 40.0% | |
| GAGATAACGACAGAACTGAA+AGG | + | chr3.2:90616143-90616162 | None:intergenic | 40.0% | |
| GATAGAACTAACATACCTGC+TGG | + | chr3.2:90615922-90615941 | None:intergenic | 40.0% | |
| GCAACAAGTGTTTAGCTGTA+GGG | + | chr3.2:90615258-90615277 | None:intergenic | 40.0% | |
| GCGAAGCAGCAAATTAAGAA+GGG | + | chr3.2:90615822-90615841 | None:intergenic | 40.0% | |
| GCTACATTGGATCATGCAAA+TGG | - | chr3.2:90618126-90618145 | MS.gene014393:CDS | 40.0% | |
| GGAAAAAACGGAAGGGAAAA+AGG | + | chr3.2:90617346-90617365 | None:intergenic | 40.0% | |
| GGTTTGAATGGAAGATGTTG+TGG | + | chr3.2:90615230-90615249 | None:intergenic | 40.0% | |
| GTAAGAACCGGTCTCAATAA+CGG | + | chr3.2:90614096-90614115 | None:intergenic | 40.0% | |
| GTTGGAGGAAGATGAAACAA+TGG | + | chr3.2:90616947-90616966 | None:intergenic | 40.0% | |
| TACGCAGACAATTTAGCATG+AGG | + | chr3.2:90614236-90614255 | None:intergenic | 40.0% | |
| TCACTACAACCTATATGACC+AGG | - | chr3.2:90615850-90615869 | MS.gene014393:intron | 40.0% | |
| TCTTCTACCTCGGGAAAATT+CGG | - | chr3.2:90616161-90616180 | MS.gene014393:intron | 40.0% | |
| TCTTGTCCAACTAACGTGTT+GGG | + | chr3.2:90616830-90616849 | None:intergenic | 40.0% | |
| TGCAAAGTAGATGGAACTTG+TGG | + | chr3.2:90613969-90613988 | None:intergenic | 40.0% | |
| TGCGAAGCAGCAAATTAAGA+AGG | + | chr3.2:90615823-90615842 | None:intergenic | 40.0% | |
| TGTCGTTATCTCTTCTACCT+CGG | - | chr3.2:90616151-90616170 | MS.gene014393:intron | 40.0% | |
| TTCTTACGCTGCAAAGTAGA+TGG | + | chr3.2:90613978-90613997 | None:intergenic | 40.0% | |
| ! | AGTACCCAACACCTTTTACA+TGG | + | chr3.2:90617486-90617505 | None:intergenic | 40.0% |
| ! | TTGGAGATTTGGAGCTGTTT+AGG | - | chr3.2:90617878-90617897 | MS.gene014393:intron | 40.0% |
| ! | TTGGTCCATGTAAAAGGTGT+TGG | - | chr3.2:90617478-90617497 | MS.gene014393:intron | 40.0% |
| !! | TGGTCCATGTAAAAGGTGTT+GGG | - | chr3.2:90617479-90617498 | MS.gene014393:intron | 40.0% |
| !!! | GGGAAAAAGGTGCTTTTTTC+TGG | + | chr3.2:90617333-90617352 | None:intergenic | 40.0% |
| AAACCTGACCCAACTCATCA+TGG | + | chr3.2:90615722-90615741 | None:intergenic | 45.0% | |
| AAAGGTTGACCACTAGGCTA+TGG | + | chr3.2:90617631-90617650 | None:intergenic | 45.0% | |
| AAATGGCACACCACAACACA+TGG | - | chr3.2:90617081-90617100 | MS.gene014393:intron | 45.0% | |
| AAATGGGTGGATGGTGTCTA+AGG | - | chr3.2:90618143-90618162 | MS.gene014393:CDS | 45.0% | |
| AAGTGTTTAGCTGTAGGGGT+AGG | + | chr3.2:90615253-90615272 | None:intergenic | 45.0% | |
| ACAATGTGAAGGAGGATGGT+TGG | + | chr3.2:90616965-90616984 | None:intergenic | 45.0% | |
| ACAGCTCCAAATCTCCAATG+CGG | + | chr3.2:90617876-90617895 | None:intergenic | 45.0% | |
| ACTAGTCGGTGTAGTGGTTA+AGG | + | chr3.2:90616484-90616503 | None:intergenic | 45.0% | |
| ACTCTTCGCCATGATGAGTT+GGG | - | chr3.2:90615711-90615730 | MS.gene014393:intron | 45.0% | |
| ACTGGCCAAACATATTGCAG+AGG | - | chr3.2:90618338-90618357 | MS.gene014393:CDS | 45.0% | |
| ACTTCTCTGCCTGGTCATAT+AGG | + | chr3.2:90615862-90615881 | None:intergenic | 45.0% | |
| AGCTAGTGAGATGCGAGAAT+AGG | + | chr3.2:90618013-90618032 | None:intergenic | 45.0% | |
| AGTGTTTAGCTGTAGGGGTA+GGG | + | chr3.2:90615252-90615271 | None:intergenic | 45.0% | |
| ATAGCGTCCGTTATTGAGAC+CGG | - | chr3.2:90614086-90614105 | MS.gene014393:CDS | 45.0% | |
| ATCTCGGTCTATCTACAGAC+TGG | + | chr3.2:90617129-90617148 | None:intergenic | 45.0% | |
| ATTGTCTGCGTATCTTCCCA+AGG | - | chr3.2:90614244-90614263 | MS.gene014393:CDS | 45.0% | |
| CAATCCGATGCAATGCAAGT+AGG | + | chr3.2:90615689-90615708 | None:intergenic | 45.0% | |
| CACAGGTGGTAACTAACTCA+GGG | + | chr3.2:90617669-90617688 | None:intergenic | 45.0% | |
| CATTGGATCATGCAAATGGG+TGG | - | chr3.2:90618130-90618149 | MS.gene014393:CDS | 45.0% | |
| CCACAAGTGTTTATGCCAGT+AGG | + | chr3.2:90614450-90614469 | None:intergenic | 45.0% | |
| CCAGATCTCCAGTAAGTTCA+TGG | + | chr3.2:90615538-90615557 | None:intergenic | 45.0% | |
| CCATGAACTTACTGGAGATC+TGG | - | chr3.2:90615535-90615554 | MS.gene014393:intron | 45.0% | |
| CCTACTGGCATAAACACTTG+TGG | - | chr3.2:90614447-90614466 | MS.gene014393:intron | 45.0% | |
| CGACATAATGTCATCAGGAC+TGG | - | chr3.2:90617967-90617986 | MS.gene014393:intron | 45.0% | |
| CTAGTCGGTGTAGTGGTTAA+GGG | + | chr3.2:90616483-90616502 | None:intergenic | 45.0% | |
| CTGGAGATCTGGCTGAAATT+CGG | - | chr3.2:90615546-90615565 | MS.gene014393:intron | 45.0% | |
| GATGACAATGTGAAGGAGGA+TGG | + | chr3.2:90616969-90616988 | None:intergenic | 45.0% | |
| GGCAACAAGTGTTTAGCTGT+AGG | + | chr3.2:90615259-90615278 | None:intergenic | 45.0% | |
| GGGCCTAAATTGTGCAAGAA+AGG | + | chr3.2:90617649-90617668 | None:intergenic | 45.0% | |
| GTCGTTATCTCTTCTACCTC+GGG | - | chr3.2:90616152-90616171 | MS.gene014393:intron | 45.0% | |
| GTCTCCGACATAATGTCATC+AGG | - | chr3.2:90617962-90617981 | MS.gene014393:intron | 45.0% | |
| GTCTCGCAAGTGTTTATGTC+AGG | + | chr3.2:90614767-90614786 | None:intergenic | 45.0% | |
| GTGTAGTGGTTAAGGGAGAT+AGG | + | chr3.2:90616476-90616495 | None:intergenic | 45.0% | |
| TCAGCATCAGCAACAGGATT+TGG | + | chr3.2:90618066-90618085 | None:intergenic | 45.0% | |
| TCCCAGTGGAAAAAACGGAA+GGG | + | chr3.2:90617353-90617372 | None:intergenic | 45.0% | |
| TGAAGCACATTCAAACCAGC+AGG | - | chr3.2:90615904-90615923 | MS.gene014393:intron | 45.0% | |
| TGCAAGAAAGGTTGACCACT+AGG | + | chr3.2:90617637-90617656 | None:intergenic | 45.0% | |
| TGCATAAAGACAGTTCGCTC+AGG | + | chr3.2:90616322-90616341 | None:intergenic | 45.0% | |
| TGGAGATCTGGCTGAAATTC+GGG | - | chr3.2:90615547-90615566 | MS.gene014393:intron | 45.0% | |
| TGGATGGTGTCTAAGGAAAC+AGG | - | chr3.2:90618150-90618169 | MS.gene014393:CDS | 45.0% | |
| TGGGGCAATTGATGCTACAT+TGG | - | chr3.2:90618113-90618132 | MS.gene014393:CDS | 45.0% | |
| TGGGTGTACGTTAGCAAATC+CGG | - | chr3.2:90616759-90616778 | MS.gene014393:CDS | 45.0% | |
| TGTCGAAGGCTATTCGTGAT+GGG | - | chr3.2:90618094-90618113 | MS.gene014393:CDS | 45.0% | |
| TGTGGAGAAACGGAATTCGA+AGG | + | chr3.2:90613951-90613970 | None:intergenic | 45.0% | |
| TTAGCACCCAACACGTTAGT+TGG | - | chr3.2:90616821-90616840 | MS.gene014393:CDS | 45.0% | |
| TTAGCATGAGGTTCAGAACC+AGG | + | chr3.2:90614224-90614243 | None:intergenic | 45.0% | |
| TTCCCAGTGGAAAAAACGGA+AGG | + | chr3.2:90617354-90617373 | None:intergenic | 45.0% | |
| ! | GAATAGTCCGAATTTTCCCG+AGG | + | chr3.2:90616171-90616190 | None:intergenic | 45.0% |
| ! | GTTCTTCAGCTAGTGTTGCT+TGG | - | chr3.2:90615444-90615463 | MS.gene014393:intron | 45.0% |
| !!! | TCCCTTCCGTTTTTTCCACT+GGG | - | chr3.2:90617349-90617368 | MS.gene014393:intron | 45.0% |
| !!! | TTCCCTTCCGTTTTTTCCAC+TGG | - | chr3.2:90617348-90617367 | MS.gene014393:intron | 45.0% |
| !! | AATATATAAGATTTATAAAT+AGG | + | chr3.2:90614318-90614337 | None:intergenic | 5.0% |
| !!! | TTAAATTTTTTATACAAATT+AGG | - | chr3.2:90614550-90614569 | MS.gene014393:intron | 5.0% |
| !!! | TTTTTTAATAAAGAAAAATT+GGG | + | chr3.2:90616855-90616874 | None:intergenic | 5.0% |
| AAGTGGTTGCATACGCCTTG+AGG | + | chr3.2:90616701-90616720 | None:intergenic | 50.0% | |
| ACAACAGCAAGAGCAGGAAC+TGG | - | chr3.2:90618320-90618339 | MS.gene014393:CDS | 50.0% | |
| AGAGAGACAACAGCAAGAGC+AGG | - | chr3.2:90618314-90618333 | MS.gene014393:CDS | 50.0% | |
| ATCTCAAGGCCATAGCCTAG+TGG | - | chr3.2:90617619-90617638 | MS.gene014393:intron | 50.0% | |
| ATGACCAGGCAGAGAAGTTG+AGG | - | chr3.2:90615864-90615883 | MS.gene014393:intron | 50.0% | |
| ATGAGTTCCGTCTGCACTGA+AGG | + | chr3.2:90617929-90617948 | None:intergenic | 50.0% | |
| ATGCTCTCAGCATCAGCAAC+AGG | + | chr3.2:90618072-90618091 | None:intergenic | 50.0% | |
| ATGTGAAGGAGGATGGTTGG+AGG | + | chr3.2:90616962-90616981 | None:intergenic | 50.0% | |
| CAACTCATCATGGCGAAGAG+TGG | + | chr3.2:90615712-90615731 | None:intergenic | 50.0% | |
| CACTCTTCGCCATGATGAGT+TGG | - | chr3.2:90615710-90615729 | MS.gene014393:intron | 50.0% | |
| CGAGAATTGAAAGCCAGCTG+AGG | + | chr3.2:90618198-90618217 | None:intergenic | 50.0% | |
| CTCGATCATGTTCTCACTCC+TGG | - | chr3.2:90614203-90614222 | MS.gene014393:CDS | 50.0% | |
| GAGATCTGGCTGAAATTCGG+GGG | - | chr3.2:90615549-90615568 | MS.gene014393:intron | 50.0% | |
| GCACAGGTGGTAACTAACTC+AGG | + | chr3.2:90617670-90617689 | None:intergenic | 50.0% | |
| GGAGATCTGGCTGAAATTCG+GGG | - | chr3.2:90615548-90615567 | MS.gene014393:intron | 50.0% | |
| GGAGGATGATCATGAGATGG+AGG | - | chr3.2:90615198-90615217 | MS.gene014393:intron | 50.0% | |
| GGATCATGCAAATGGGTGGA+TGG | - | chr3.2:90618134-90618153 | MS.gene014393:CDS | 50.0% | |
| GGATGATCATGAGATGGAGG+TGG | - | chr3.2:90615201-90615220 | MS.gene014393:intron | 50.0% | |
| GGCAGAGAAGTTGAGGTCAA+AGG | - | chr3.2:90615871-90615890 | MS.gene014393:intron | 50.0% | |
| GGCCAAACATATTGCAGAGG+AGG | - | chr3.2:90618341-90618360 | MS.gene014393:CDS | 50.0% | |
| GGGTGTACGTTAGCAAATCC+GGG | - | chr3.2:90616760-90616779 | MS.gene014393:CDS | 50.0% | |
| GGGTGTGCAATAGCATTACC+CGG | + | chr3.2:90616781-90616800 | None:intergenic | 50.0% | |
| GTAAAGCTCCAGTTGCAGCT+CGG | - | chr3.2:90616236-90616255 | MS.gene014393:intron | 50.0% | |
| GTCGAAGGCTATTCGTGATG+GGG | - | chr3.2:90618095-90618114 | MS.gene014393:CDS | 50.0% | |
| GTGTCGAAGGCTATTCGTGA+TGG | - | chr3.2:90618093-90618112 | MS.gene014393:CDS | 50.0% | |
| GTGTTTAGCTGTAGGGGTAG+GGG | + | chr3.2:90615251-90615270 | None:intergenic | 50.0% | |
| TAAAGCTCCAGTTGCAGCTC+GGG | - | chr3.2:90616237-90616256 | MS.gene014393:intron | 50.0% | |
| TATTCCAGTGCTCACAGCTG+TGG | - | chr3.2:90615983-90616002 | MS.gene014393:CDS | 50.0% | |
| TGTAGGGGTAGGGGTTTGAA+TGG | + | chr3.2:90615242-90615261 | None:intergenic | 50.0% | |
| TTGACCTCAACTTCTCTGCC+TGG | + | chr3.2:90615871-90615890 | None:intergenic | 50.0% | |
| ! | TGAGACCGGTTCTTACTCGA+AGG | - | chr3.2:90614100-90614119 | MS.gene014393:CDS | 50.0% |
| !! | TGCTGAGAGCATTGTGTCGA+AGG | - | chr3.2:90618080-90618099 | MS.gene014393:CDS | 50.0% |
| AAAGCTCCAGTTGCAGCTCG+GGG | - | chr3.2:90616238-90616257 | MS.gene014393:intron | 55.0% | |
| AATCTCCAATGCGGACAGCC+TGG | + | chr3.2:90617867-90617886 | None:intergenic | 55.0% | |
| AGTTCCGTCTGCACTGAAGG+TGG | + | chr3.2:90617926-90617945 | None:intergenic | 55.0% | |
| ATCACCACAGCTGTGAGCAC+TGG | + | chr3.2:90615990-90616009 | None:intergenic | 55.0% | |
| GAATTCCAGGCTGTCCGCAT+TGG | - | chr3.2:90617859-90617878 | MS.gene014393:intron | 55.0% | |
| GAGCTTTACGAGCAGCTTGC+AGG | + | chr3.2:90616225-90616244 | None:intergenic | 55.0% | |
| GCAACCACCTTCAGTGCAGA+CGG | - | chr3.2:90617919-90617938 | MS.gene014393:intron | 55.0% | |
| GGCTGTCCGCATTGGAGATT+TGG | - | chr3.2:90617867-90617886 | MS.gene014393:intron | 55.0% | |
| ! | TCGCCATGATGAGTTGGGTC+AGG | - | chr3.2:90615716-90615735 | MS.gene014393:intron | 55.0% |
| CGAAAACCCCGAGCTGCAAC+TGG | + | chr3.2:90616247-90616266 | None:intergenic | 60.0% | |
| AGCCAGCTGAGGCTCATGCG+TGG | + | chr3.2:90618187-90618206 | None:intergenic | 65.0% | |
| CTCCACGCATGAGCCTCAGC+TGG | - | chr3.2:90618182-90618201 | MS.gene014393:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 90613912 | 90618380 | 90613912 | ID=MS.gene014393 |
| chr3.2 | mRNA | 90613912 | 90618380 | 90613912 | ID=MS.gene014393.t1;Parent=MS.gene014393 |
| chr3.2 | exon | 90618302 | 90618380 | 90618302 | ID=MS.gene014393.t1.exon1;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90618302 | 90618380 | 90618302 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90618027 | 90618217 | 90618027 | ID=MS.gene014393.t1.exon2;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90618027 | 90618217 | 90618027 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90616947 | 90617093 | 90616947 | ID=MS.gene014393.t1.exon3;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90616947 | 90617093 | 90616947 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90616722 | 90616858 | 90616722 | ID=MS.gene014393.t1.exon4;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90616722 | 90616858 | 90616722 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90616555 | 90616609 | 90616555 | ID=MS.gene014393.t1.exon5;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90616555 | 90616609 | 90616555 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90616367 | 90616477 | 90616367 | ID=MS.gene014393.t1.exon6;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90616367 | 90616477 | 90616367 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90615905 | 90616144 | 90615905 | ID=MS.gene014393.t1.exon7;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90615905 | 90616144 | 90615905 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| chr3.2 | exon | 90613912 | 90614424 | 90613912 | ID=MS.gene014393.t1.exon8;Parent=MS.gene014393.t1 |
| chr3.2 | CDS | 90613912 | 90614424 | 90613912 | ID=cds.MS.gene014393.t1;Parent=MS.gene014393.t1 |
| Gene Sequence |
| Protein sequence |
