Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52815.t1 | XP_003603813.1 | 98.9 | 461 | 5 | 0 | 1 | 461 | 1 | 461 | 2.00E-255 | 891.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52815.t1 | Q06364 | 84.7 | 463 | 66 | 2 | 1 | 461 | 1 | 460 | 2.7e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52815.t1 | G7J5U6 | 98.9 | 461 | 5 | 0 | 1 | 461 | 1 | 461 | 1.4e-255 | 891.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene52815 | 0.840543 | 8.16E-58 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52815.t1 | MTR_3g114480 | 98.980 | 490 | 5 | 0 | 1 | 490 | 1 | 490 | 0.0 | 1002 |
| MS.gene52815.t1 | MTR_3g114480 | 99.000 | 400 | 4 | 0 | 91 | 490 | 54 | 453 | 0.0 | 825 |
| MS.gene52815.t1 | MTR_3g114480 | 97.549 | 408 | 10 | 0 | 83 | 490 | 16 | 423 | 0.0 | 825 |
| MS.gene52815.t1 | MTR_1g026030 | 85.567 | 485 | 56 | 5 | 1 | 482 | 1 | 474 | 0.0 | 792 |
| MS.gene52815.t1 | MTR_1g107545 | 51.500 | 200 | 33 | 4 | 138 | 337 | 25 | 160 | 4.91e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52815.t1 | AT1G20200 | 82.653 | 490 | 83 | 1 | 1 | 490 | 1 | 488 | 0.0 | 810 |
| MS.gene52815.t1 | AT1G75990 | 81.633 | 490 | 87 | 1 | 1 | 490 | 1 | 487 | 0.0 | 785 |
Find 102 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGATCTGGCTGAAATTC+GGG | 0.287672 | 3.1:-90695478 | MS.gene52815:CDS |
| GGCTGTCCGCATTGGAGATT+TGG | 0.288995 | 3.1:-90693162 | MS.gene52815:CDS |
| TTGGAGATTTGGAGCTGTTT+AGG | 0.292663 | 3.1:-90693151 | MS.gene52815:CDS |
| CTCGATCATGTTCTCACTCC+TGG | 0.302582 | 3.1:-90696824 | MS.gene52815:CDS |
| TCATATAGCCATGAACTTAC+TGG | 0.313557 | 3.1:-90695498 | MS.gene52815:CDS |
| GAGCTTTACGAGCAGCTTGC+AGG | 0.339070 | 3.1:+90694805 | None:intergenic |
| CTGGAGATCTGGCTGAAATT+CGG | 0.352735 | 3.1:-90695479 | MS.gene52815:CDS |
| CCAGATCTCCAGTAAGTTCA+TGG | 0.361028 | 3.1:+90695490 | None:intergenic |
| CGAAAACCCCGAGCTGCAAC+TGG | 0.373967 | 3.1:+90694783 | None:intergenic |
| GAAAATTCGGACTATTCAAT+TGG | 0.381260 | 3.1:-90694853 | MS.gene52815:CDS |
| TCAGCATCAGCAACAGGATT+TGG | 0.384636 | 3.1:+90692966 | None:intergenic |
| TCTTCTACCTCGGGAAAATT+CGG | 0.396222 | 3.1:-90694866 | MS.gene52815:CDS |
| TAAAGCTCCAGTTGCAGCTC+GGG | 0.397705 | 3.1:-90694790 | MS.gene52815:CDS |
| TTCTTACGCTGCAAAGTAGA+TGG | 0.406026 | 3.1:+90697052 | None:intergenic |
| ATCATAGTGCGTTTACTGTT+GGG | 0.406603 | 3.1:-90694738 | MS.gene52815:CDS |
| CACTCTTCGCCATGATGAGT+TGG | 0.420792 | 3.1:-90695315 | MS.gene52815:CDS |
| ATCCTCCTCTGCAATATGTT+TGG | 0.422847 | 3.1:+90692686 | None:intergenic |
| GTTCTTCAGCTAGTGTTGCT+TGG | 0.427729 | 3.1:-90695581 | MS.gene52815:CDS |
| ACTTCTCTGCCTGGTCATAT+AGG | 0.427888 | 3.1:+90695166 | None:intergenic |
| ATTGTGATTCATAGATTTGA+AGG | 0.432257 | 3.1:-90696966 | MS.gene52815:intron |
| TGTCGTTATCTCTTCTACCT+CGG | 0.432513 | 3.1:-90694876 | MS.gene52815:CDS |
| GTCGTTATCTCTTCTACCTC+GGG | 0.434794 | 3.1:-90694875 | MS.gene52815:CDS |
| CCATGAACTTACTGGAGATC+TGG | 0.437963 | 3.1:-90695490 | MS.gene52815:CDS |
| TAACAGTAAATTTCTAGCTC+AGG | 0.444215 | 3.1:+90695748 | None:intergenic |
| AAATGGGTGGATGGTGTCTA+AGG | 0.451020 | 3.1:-90692886 | MS.gene52815:CDS |
| TTGACCTCAACTTCTCTGCC+TGG | 0.452207 | 3.1:+90695157 | None:intergenic |
| TCGCCATGATGAGTTGGGTC+AGG | 0.453949 | 3.1:-90695309 | MS.gene52815:intron |
| ATGCTCTCAGCATCAGCAAC+AGG | 0.456927 | 3.1:+90692960 | None:intergenic |
| TATCATAGTGCGTTTACTGT+TGG | 0.459477 | 3.1:-90694739 | MS.gene52815:CDS |
| TGGATGGTGTCTAAGGAAAC+AGG | 0.461685 | 3.1:-90692879 | MS.gene52815:CDS |
| ACTAGCTGAAGAACAAGCTT+TGG | 0.471713 | 3.1:+90695590 | None:intergenic |
| AGTGTTTAGCTGTAGGGGTA+GGG | 0.475084 | 3.1:+90695776 | None:intergenic |
| GTGTTTAGCTGTAGGGGTAG+GGG | 0.484533 | 3.1:+90695777 | None:intergenic |
| TGCGAAGCAGCAAATTAAGA+AGG | 0.487151 | 3.1:+90695205 | None:intergenic |
| GCAACAAGTGTTTAGCTGTA+GGG | 0.489547 | 3.1:+90695770 | None:intergenic |
| AACTTCCTTCGAGTAAGAAC+CGG | 0.493423 | 3.1:+90696922 | None:intergenic |
| GCTACATTGGATCATGCAAA+TGG | 0.497010 | 3.1:-90692903 | MS.gene52815:CDS |
| CTGTCGATGTTATTGCATCT+AGG | 0.500017 | 3.1:-90695536 | MS.gene52815:CDS |
| AGATGGAACTTGTGGAGAAA+CGG | 0.500179 | 3.1:+90697069 | None:intergenic |
| CTCCACGCATGAGCCTCAGC+TGG | 0.501442 | 3.1:-90692847 | MS.gene52815:CDS |
| GTCTCCGACATAATGTCATC+AGG | 0.501605 | 3.1:-90693067 | MS.gene52815:CDS |
| ACTCTTCGCCATGATGAGTT+GGG | 0.503587 | 3.1:-90695314 | MS.gene52815:CDS |
| ACAACAGCAAGAGCAGGAAC+TGG | 0.505747 | 3.1:-90692709 | MS.gene52815:CDS |
| GAATTCCAGGCTGTCCGCAT+TGG | 0.508181 | 3.1:-90693170 | MS.gene52815:intron |
| GTGTCGAAGGCTATTCGTGA+TGG | 0.511320 | 3.1:-90692936 | MS.gene52815:CDS |
| ACATTTGTAAGCTCAAAGTA+AGG | 0.517576 | 3.1:+90694660 | None:intergenic |
| ATGAGTTCCGTCTGCACTGA+AGG | 0.520485 | 3.1:+90693103 | None:intergenic |
| GTAAAGCTCCAGTTGCAGCT+CGG | 0.520793 | 3.1:-90694791 | MS.gene52815:CDS |
| TGTCGAAGGCTATTCGTGAT+GGG | 0.522093 | 3.1:-90692935 | MS.gene52815:CDS |
| GTAAGAACCGGTCTCAATAA+CGG | 0.524017 | 3.1:+90696934 | None:intergenic |
| AGAGAGACAACAGCAAGAGC+AGG | 0.524456 | 3.1:-90692715 | MS.gene52815:CDS |
| GAAACCTACTTGCATTGCAT+CGG | 0.524818 | 3.1:-90695343 | MS.gene52815:CDS |
| GGAGGATGATCATGAGATGG+AGG | 0.525489 | 3.1:-90695827 | MS.gene52815:CDS |
| AAGTGTTTAGCTGTAGGGGT+AGG | 0.526202 | 3.1:+90695775 | None:intergenic |
| AGCTAGTGAGATGCGAGAAT+AGG | 0.527722 | 3.1:+90693019 | None:intergenic |
| ATTGTGCATGTTAAGACAGA+AGG | 0.528644 | 3.1:+90692806 | None:intergenic |
| TGAAGCACATTCAAACCAGC+AGG | 0.534748 | 3.1:-90695121 | MS.gene52815:intron |
| CGAACTGTCTTTATGCAGAA+AGG | 0.537836 | 3.1:-90694702 | MS.gene52815:CDS |
| TGTAGGGGTAGGGGTTTGAA+TGG | 0.543905 | 3.1:+90695786 | None:intergenic |
| TTCGAATTCAATGTAACAAG+TGG | 0.544110 | 3.1:-90694764 | MS.gene52815:CDS |
| TGCATAAAGACAGTTCGCTC+AGG | 0.545859 | 3.1:+90694708 | None:intergenic |
| CGACATAATGTCATCAGGAC+TGG | 0.551358 | 3.1:-90693062 | MS.gene52815:CDS |
| GGCAGAGAAGTTGAGGTCAA+AGG | 0.552276 | 3.1:-90695154 | MS.gene52815:CDS |
| GGCAACAAGTGTTTAGCTGT+AGG | 0.555242 | 3.1:+90695769 | None:intergenic |
| TGTCTTTATGCAGAAAGGAA+TGG | 0.555289 | 3.1:-90694697 | MS.gene52815:CDS |
| AAACCTGACCCAACTCATCA+TGG | 0.555876 | 3.1:+90695306 | None:intergenic |
| TTAGCATGAGGTTCAGAACC+AGG | 0.559671 | 3.1:+90696806 | None:intergenic |
| GCGAAGCAGCAAATTAAGAA+GGG | 0.562737 | 3.1:+90695206 | None:intergenic |
| TGCTGAGAGCATTGTGTCGA+AGG | 0.568158 | 3.1:-90692949 | MS.gene52815:CDS |
| GGATGATCATGAGATGGAGG+TGG | 0.570304 | 3.1:-90695824 | MS.gene52815:CDS |
| TCGAATTCAATGTAACAAGT+GGG | 0.570948 | 3.1:-90694763 | MS.gene52815:CDS |
| ATGACCAGGCAGAGAAGTTG+AGG | 0.578368 | 3.1:-90695161 | MS.gene52815:CDS |
| ATAGGAGGATGATCATGAGA+TGG | 0.579908 | 3.1:-90695830 | MS.gene52815:intron |
| CAACAAGTGTTTAGCTGTAG+GGG | 0.588492 | 3.1:+90695771 | None:intergenic |
| ATAGCGTCCGTTATTGAGAC+CGG | 0.589430 | 3.1:-90696941 | MS.gene52815:CDS |
| GGCCAAACATATTGCAGAGG+AGG | 0.589837 | 3.1:-90692688 | MS.gene52815:CDS |
| CAACTCATCATGGCGAAGAG+TGG | 0.590059 | 3.1:+90695316 | None:intergenic |
| GCAACCACCTTCAGTGCAGA+CGG | 0.594746 | 3.1:-90693110 | MS.gene52815:CDS |
| TGGGGCAATTGATGCTACAT+TGG | 0.595169 | 3.1:-90692916 | MS.gene52815:CDS |
| CTACATTGGATCATGCAAAT+GGG | 0.597867 | 3.1:-90692902 | MS.gene52815:CDS |
| CAATCCGATGCAATGCAAGT+AGG | 0.600803 | 3.1:+90695339 | None:intergenic |
| AAAGCTCCAGTTGCAGCTCG+GGG | 0.611705 | 3.1:-90694789 | MS.gene52815:CDS |
| TACGCAGACAATTTAGCATG+AGG | 0.613498 | 3.1:+90696794 | None:intergenic |
| AGCCAGCTGAGGCTCATGCG+TGG | 0.615404 | 3.1:+90692845 | None:intergenic |
| GGTTTGAATGGAAGATGTTG+TGG | 0.620968 | 3.1:+90695798 | None:intergenic |
| GGATCATGCAAATGGGTGGA+TGG | 0.621270 | 3.1:-90692895 | MS.gene52815:CDS |
| TTTGAATGTGCTTCAAATCG+TGG | 0.621618 | 3.1:+90695129 | None:intergenic |
| TGAGACCGGTTCTTACTCGA+AGG | 0.622392 | 3.1:-90696927 | MS.gene52815:CDS |
| ATTGTCTGCGTATCTTCCCA+AGG | 0.623168 | 3.1:-90696783 | MS.gene52815:intron |
| GGAGATCTGGCTGAAATTCG+GGG | 0.623695 | 3.1:-90695477 | MS.gene52815:CDS |
| TGCAAAGTAGATGGAACTTG+TGG | 0.628606 | 3.1:+90697061 | None:intergenic |
| CGAGAATTGAAAGCCAGCTG+AGG | 0.642823 | 3.1:+90692834 | None:intergenic |
| GTCGAAGGCTATTCGTGATG+GGG | 0.643333 | 3.1:-90692934 | MS.gene52815:CDS |
| CAGTCCTGATGACATTATGT+CGG | 0.646136 | 3.1:+90693063 | None:intergenic |
| TCACTACAACCTATATGACC+AGG | 0.647246 | 3.1:-90695175 | MS.gene52815:CDS |
| TGTGGAGAAACGGAATTCGA+AGG | 0.647707 | 3.1:+90697079 | None:intergenic |
| TTCGTCTTACAATTGCATTG+AGG | 0.658485 | 3.1:-90696880 | MS.gene52815:CDS |
| GAGATCTGGCTGAAATTCGG+GGG | 0.660656 | 3.1:-90695476 | MS.gene52815:intron |
| CATTGGATCATGCAAATGGG+TGG | 0.661664 | 3.1:-90692899 | MS.gene52815:CDS |
| AGTTCCGTCTGCACTGAAGG+TGG | 0.692083 | 3.1:+90693106 | None:intergenic |
| ACTGGCCAAACATATTGCAG+AGG | 0.692977 | 3.1:-90692691 | MS.gene52815:CDS |
| ACAGCTCCAAATCTCCAATG+CGG | 0.755080 | 3.1:+90693156 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATTATAGATTCAAT+TGG | + | chr3.1:90696352-90696371 | None:intergenic | 10.0% |
| !!! | CTTTTTTAATAAAGAAAAAT+TGG | + | chr3.1:90695615-90695634 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTGTACTTTT+TGG | - | chr3.1:90694797-90694816 | MS.gene52815:CDS | 10.0% |
| !! | AATTCTTAATCTAAATTACT+AGG | - | chr3.1:90693725-90693744 | MS.gene52815:intron | 15.0% |
| !! | GTAATTTAGATTAAGAATTA+AGG | + | chr3.1:90693724-90693743 | None:intergenic | 15.0% |
| !! | TAATTATTAATGTTATCTCA+AGG | - | chr3.1:90696362-90696381 | MS.gene52815:intron | 15.0% |
| !! | TATTAAAAAAGTCAAAACAA+GGG | - | chr3.1:90695624-90695643 | MS.gene52815:intron | 15.0% |
| !! | TCTATATAATCAATAAATCA+AGG | - | chr3.1:90694352-90694371 | MS.gene52815:intron | 15.0% |
| !! | TTATTAAAAAAGTCAAAACA+AGG | - | chr3.1:90695623-90695642 | MS.gene52815:intron | 15.0% |
| !!! | AAATGCATAAAATATTCTTT+TGG | + | chr3.1:90696449-90696468 | None:intergenic | 15.0% |
| !!! | ATGAATTAGTTTTTTTTTGT+TGG | - | chr3.1:90693147-90693166 | MS.gene52815:CDS | 15.0% |
| !!! | TGTCTGATTTTTTATATTTT+AGG | - | chr3.1:90694173-90694192 | MS.gene52815:intron | 15.0% |
| !!! | TTTTTTTTGTTGGTTATTTA+GGG | - | chr3.1:90693157-90693176 | MS.gene52815:CDS | 15.0% |
| !!! | TTTTTTTTTGTTGGTTATTT+AGG | - | chr3.1:90693156-90693175 | MS.gene52815:CDS | 15.0% |
| !! | ATATAATCAATAAATCAAGG+AGG | - | chr3.1:90694355-90694374 | MS.gene52815:intron | 20.0% |
| !! | CAAAATTCACAAATTGAAAA+CGG | + | chr3.1:90692798-90692817 | None:intergenic | 20.0% |
| !! | CTAACAAACATCTAATTTAT+AGG | + | chr3.1:90695564-90695583 | None:intergenic | 20.0% |
| !! | GATAAGTTATAACTAAAATG+TGG | + | chr3.1:90695310-90695329 | None:intergenic | 20.0% |
| !! | GCAACAATTAACTATATTTA+GGG | + | chr3.1:90696196-90696215 | None:intergenic | 20.0% |
| !! | GTAGTTTCAATTAAGAATTA+GGG | + | chr3.1:90693336-90693355 | None:intergenic | 20.0% |
| !! | TAAACACTTAAATGATAATC+AGG | - | chr3.1:90693659-90693678 | MS.gene52815:intron | 20.0% |
| !! | TAAACTCTTAATCTCTTTAA+TGG | + | chr3.1:90696038-90696057 | None:intergenic | 20.0% |
| !! | TATCTTCATCAGAAAATATT+AGG | - | chr3.1:90693863-90693882 | MS.gene52815:intron | 20.0% |
| !! | TGAGAGATAGAAAATAAATA+AGG | - | chr3.1:90696148-90696167 | MS.gene52815:intron | 20.0% |
| !!! | AACTTGTTTAAATCTTTTTG+TGG | - | chr3.1:90694406-90694425 | MS.gene52815:intron | 20.0% |
| !!! | AGAATATTTTATGCATTTGT+TGG | - | chr3.1:90696451-90696470 | MS.gene52815:intron | 20.0% |
| !!! | GAGAAGATTTTTTTATGTTA+GGG | - | chr3.1:90694517-90694536 | MS.gene52815:intron | 20.0% |
| !!! | GAGTACTTTTTGTATATAAA+TGG | - | chr3.1:90695821-90695840 | MS.gene52815:CDS | 20.0% |
| !!! | GTTTTCTATGATTGTATTTA+GGG | - | chr3.1:90693436-90693455 | MS.gene52815:intron | 20.0% |
| !!! | TGTTTTCTATGATTGTATTT+AGG | - | chr3.1:90693435-90693454 | MS.gene52815:intron | 20.0% |
| !!! | TTTTTGAATGTTCTAAATAC+AGG | - | chr3.1:90695994-90696013 | MS.gene52815:intron | 20.0% |
| ! | AAACACTCCTAAAAAATAAG+CGG | + | chr3.1:90695406-90695425 | None:intergenic | 25.0% |
| ! | AAGGAGTAAGAATTAACAAA+AGG | + | chr3.1:90694850-90694869 | None:intergenic | 25.0% |
| ! | AATACTCCATAAAAACTAGT+CGG | + | chr3.1:90695257-90695276 | None:intergenic | 25.0% |
| ! | AATAGTCCTAAACAATAAGT+GGG | - | chr3.1:90695499-90695518 | MS.gene52815:CDS | 25.0% |
| ! | AATTCTTAATTGAAACTACG+AGG | - | chr3.1:90693337-90693356 | MS.gene52815:intron | 25.0% |
| ! | ACAAACATCTAATTTATAGG+TGG | + | chr3.1:90695561-90695580 | None:intergenic | 25.0% |
| ! | ACTACTACTAAAAAAAGAAG+TGG | - | chr3.1:90695339-90695358 | MS.gene52815:CDS | 25.0% |
| ! | AGCAAGTTAAAACTAAAAAG+TGG | + | chr3.1:90695477-90695496 | None:intergenic | 25.0% |
| ! | ATAAGCATTTCATTACATCT+CGG | + | chr3.1:90695902-90695921 | None:intergenic | 25.0% |
| ! | ATTCTTAATTGAAACTACGA+GGG | - | chr3.1:90693338-90693357 | MS.gene52815:intron | 25.0% |
| ! | ATTGTGATTCATAGATTTGA+AGG | - | chr3.1:90692820-90692839 | MS.gene52815:CDS | 25.0% |
| ! | CAAACATCTAATTTATAGGT+GGG | + | chr3.1:90695560-90695579 | None:intergenic | 25.0% |
| ! | CGCAACAATTAACTATATTT+AGG | + | chr3.1:90696197-90696216 | None:intergenic | 25.0% |
| ! | CGTAGTTTCAATTAAGAATT+AGG | + | chr3.1:90693337-90693356 | None:intergenic | 25.0% |
| ! | CTACTACTAAAAAAAGAAGT+GGG | - | chr3.1:90695340-90695359 | MS.gene52815:CDS | 25.0% |
| ! | GAAGAAAGAAAATGGTTTAT+TGG | - | chr3.1:90696216-90696235 | MS.gene52815:intron | 25.0% |
| ! | GATTAAGAATTAAGGATGTT+TGG | + | chr3.1:90693716-90693735 | None:intergenic | 25.0% |
| ! | TAAATCTACCATTGCATTTA+GGG | - | chr3.1:90693124-90693143 | MS.gene52815:CDS | 25.0% |
| ! | TATAGCAAATAACACAAGTA+TGG | + | chr3.1:90696566-90696585 | None:intergenic | 25.0% |
| ! | TGAAAACATAAAAGCAATAC+AGG | + | chr3.1:90694117-90694136 | None:intergenic | 25.0% |
| ! | TTAAATCTACCATTGCATTT+AGG | - | chr3.1:90693123-90693142 | MS.gene52815:CDS | 25.0% |
| !! | ATAAAATATTCTTTTGGCAC+AGG | + | chr3.1:90696443-90696462 | None:intergenic | 25.0% |
| !! | ATTTTCATAACCTATCATAG+AGG | + | chr3.1:90693595-90693614 | None:intergenic | 25.0% |
| !! | ATTTTCTGATGAAGATAGAA+AGG | + | chr3.1:90693860-90693879 | None:intergenic | 25.0% |
| !! | CGTTTTCAATTTGTGAATTT+TGG | - | chr3.1:90692796-90692815 | MS.gene52815:CDS | 25.0% |
| !! | GACTATTTTCATACAGTTTA+TGG | + | chr3.1:90693251-90693270 | None:intergenic | 25.0% |
| !! | TCATTTGTTAATTCTCCATT+TGG | - | chr3.1:90696536-90696555 | MS.gene52815:intron | 25.0% |
| !! | TTTTCTGATGAAGATAGAAA+GGG | + | chr3.1:90693859-90693878 | None:intergenic | 25.0% |
| !!! | AATTTTGTCACTGATTGTAT+AGG | - | chr3.1:90693938-90693957 | MS.gene52815:intron | 25.0% |
| !!! | GGAGAAGATTTTTTTATGTT+AGG | - | chr3.1:90694516-90694535 | MS.gene52815:intron | 25.0% |
| !!! | TACAAAAAGTACTCATCATT+TGG | + | chr3.1:90695815-90695834 | None:intergenic | 25.0% |
| AAAGAAAGATGACAATGTGA+AGG | + | chr3.1:90695733-90695752 | None:intergenic | 30.0% | |
| AACACTCCTAAAAAATAAGC+GGG | + | chr3.1:90695405-90695424 | None:intergenic | 30.0% | |
| AATCAATAAGCTTCATCACA+AGG | + | chr3.1:90694779-90694798 | None:intergenic | 30.0% | |
| ACAAATGTAAGTCCACATTA+TGG | - | chr3.1:90695141-90695160 | MS.gene52815:CDS | 30.0% | |
| ACATTTGTAAGCTCAAAGTA+AGG | + | chr3.1:90695129-90695148 | None:intergenic | 30.0% | |
| ATCAATAAGCTTCATCACAA+GGG | + | chr3.1:90694778-90694797 | None:intergenic | 30.0% | |
| ATTAACACAAGTTTGTACCT+TGG | + | chr3.1:90693023-90693042 | None:intergenic | 30.0% | |
| ATTCCTTCTCAGATAAACTA+TGG | + | chr3.1:90696295-90696314 | None:intergenic | 30.0% | |
| ATTGTTGCGAAGAAAGAAAA+TGG | - | chr3.1:90696208-90696227 | MS.gene52815:intron | 30.0% | |
| CAATAGTCCTAAACAATAAG+TGG | - | chr3.1:90695498-90695517 | MS.gene52815:CDS | 30.0% | |
| GAAAATTCGGACTATTCAAT+TGG | - | chr3.1:90694933-90694952 | MS.gene52815:intron | 30.0% | |
| TAATTCATCCCTAAATGCAA+TGG | + | chr3.1:90693135-90693154 | None:intergenic | 30.0% | |
| TCGAATTCAATGTAACAAGT+GGG | - | chr3.1:90695023-90695042 | MS.gene52815:intron | 30.0% | |
| TGATCAGAAAAAATACAACG+AGG | - | chr3.1:90694085-90694104 | MS.gene52815:intron | 30.0% | |
| TTAACACAAGTTTGTACCTT+GGG | + | chr3.1:90693022-90693041 | None:intergenic | 30.0% | |
| TTAGAAACTGTTAACTGAAG+TGG | - | chr3.1:90695425-90695444 | MS.gene52815:intron | 30.0% | |
| TTCGAATTCAATGTAACAAG+TGG | - | chr3.1:90695022-90695041 | MS.gene52815:intron | 30.0% | |
| TTCTTAATTGAAACTACGAG+GGG | - | chr3.1:90693339-90693358 | MS.gene52815:intron | 30.0% | |
| ! | ATGTTTTCAACTATGCAAAC+TGG | - | chr3.1:90694128-90694147 | MS.gene52815:intron | 30.0% |
| ! | CACCTTTTAATGTTATCTCA+AGG | - | chr3.1:90696269-90696288 | MS.gene52815:intron | 30.0% |
| ! | CACTTATTGTTTAGGACTAT+TGG | + | chr3.1:90695500-90695519 | None:intergenic | 30.0% |
| ! | GACTTTTTGACAGATCTTTT+AGG | - | chr3.1:90693545-90693564 | MS.gene52815:intron | 30.0% |
| ! | TCTTTTTCTTTGTGTGTGTT+TGG | + | chr3.1:90697033-90697052 | None:intergenic | 30.0% |
| ! | TGTTAGTTTAGCTTATGTTG+TGG | - | chr3.1:90696594-90696613 | MS.gene52815:intron | 30.0% |
| ! | TTCACTATTTTCTGAGCATT+TGG | + | chr3.1:90695792-90695811 | None:intergenic | 30.0% |
| ! | TTTTCTTCAACAATTGAGCT+AGG | + | chr3.1:90695762-90695781 | None:intergenic | 30.0% |
| !! | TAACAGTAAATTTCTAGCTC+AGG | + | chr3.1:90694041-90694060 | None:intergenic | 30.0% |
| !!! | GGTTCTATTTTTTCAGTCTT+TGG | - | chr3.1:90696472-90696491 | MS.gene52815:intron | 30.0% |
| !!! | TTCTCTTCCTTTGTTTTTGA+CGG | - | chr3.1:90693889-90693908 | MS.gene52815:intron | 30.0% |
| !!! | TTTACACCCGCTTATTTTTT+AGG | - | chr3.1:90695396-90695415 | MS.gene52815:intron | 30.0% |
| AAAGTCACAAGCAGTAAATG+GGG | + | chr3.1:90693778-90693797 | None:intergenic | 35.0% | |
| AACAACGTTGAACCATAATG+TGG | + | chr3.1:90695156-90695175 | None:intergenic | 35.0% | |
| AACCTATCATAGAGGACTTA+TGG | + | chr3.1:90693587-90693606 | None:intergenic | 35.0% | |
| AAGTGTTTATGTCAGGAGAT+AGG | + | chr3.1:90693521-90693540 | None:intergenic | 35.0% | |
| ACAAAGTCACAAGCAGTAAA+TGG | + | chr3.1:90693780-90693799 | None:intergenic | 35.0% | |
| ACACTTGTGGAAACAACTTA+AGG | - | chr3.1:90693220-90693239 | MS.gene52815:intron | 35.0% | |
| ATAAAAACTAGTCGGTGTAG+TGG | + | chr3.1:90695249-90695268 | None:intergenic | 35.0% | |
| ATCATAGTGCGTTTACTGTT+GGG | - | chr3.1:90695048-90695067 | MS.gene52815:intron | 35.0% | |
| ATGAAGATAGAAAGGGAAAG+AGG | + | chr3.1:90693852-90693871 | None:intergenic | 35.0% | |
| ATTGTGCATGTTAAGACAGA+AGG | + | chr3.1:90696983-90697002 | None:intergenic | 35.0% | |
| CAAAGTCACAAGCAGTAAAT+GGG | + | chr3.1:90693779-90693798 | None:intergenic | 35.0% | |
| CAACCTTTCTTGCACAATTT+AGG | - | chr3.1:90696400-90696419 | MS.gene52815:intron | 35.0% | |
| CACAAGTATGGATATCCAAA+TGG | + | chr3.1:90696554-90696573 | None:intergenic | 35.0% | |
| CTACATTGGATCATGCAAAT+GGG | - | chr3.1:90696884-90696903 | MS.gene52815:CDS | 35.0% | |
| CTATTTCCCGTCAAAAACAA+AGG | + | chr3.1:90693899-90693918 | None:intergenic | 35.0% | |
| CTGATGTTGCTAAAAAGTTG+AGG | - | chr3.1:90696788-90696807 | MS.gene52815:CDS | 35.0% | |
| CTTACCTGTTGATGTATTTC+AGG | - | chr3.1:90694554-90694573 | MS.gene52815:intron | 35.0% | |
| GGCAAATAATTGAATGCTCA+TGG | - | chr3.1:90694149-90694168 | MS.gene52815:intron | 35.0% | |
| GGCCTTGAGATAACATTAAA+AGG | + | chr3.1:90696274-90696293 | None:intergenic | 35.0% | |
| GGTTTATTGGTCCATGTAAA+AGG | - | chr3.1:90696229-90696248 | MS.gene52815:intron | 35.0% | |
| GTATTCTAGCAAATGCCTAT+GGG | - | chr3.1:90695364-90695383 | MS.gene52815:intron | 35.0% | |
| GTTATTTAGGGATGTTTGGA+TGG | - | chr3.1:90693169-90693188 | MS.gene52815:intron | 35.0% | |
| GTTGGTTATTTAGGGATGTT+TGG | - | chr3.1:90693165-90693184 | MS.gene52815:intron | 35.0% | |
| GTTTCCTGAAATACATCAAC+AGG | + | chr3.1:90694561-90694580 | None:intergenic | 35.0% | |
| TATCATAGTGCGTTTACTGT+TGG | - | chr3.1:90695047-90695066 | MS.gene52815:intron | 35.0% | |
| TCAGAAAAAGTAGTACAAGC+AGG | + | chr3.1:90694064-90694083 | None:intergenic | 35.0% | |
| TCAGGTTTGTGTTCTACTTA+TGG | - | chr3.1:90694495-90694514 | MS.gene52815:intron | 35.0% | |
| TCATATAGCCATGAACTTAC+TGG | - | chr3.1:90694288-90694307 | MS.gene52815:intron | 35.0% | |
| TGAAGATAGAAAGGGAAAGA+GGG | + | chr3.1:90693851-90693870 | None:intergenic | 35.0% | |
| TGAGATGTGAAATCGATAGA+CGG | + | chr3.1:90692763-90692782 | None:intergenic | 35.0% | |
| TGTAAATTAGTAGCTCCCAT+AGG | + | chr3.1:90695382-90695401 | None:intergenic | 35.0% | |
| TGTATTCTAGCAAATGCCTA+TGG | - | chr3.1:90695363-90695382 | MS.gene52815:intron | 35.0% | |
| TGTCTTTATGCAGAAAGGAA+TGG | - | chr3.1:90695089-90695108 | MS.gene52815:intron | 35.0% | |
| TGTTGCTAAAAAGTTGAGGT+TGG | - | chr3.1:90696792-90696811 | MS.gene52815:CDS | 35.0% | |
| TTCCATAAGTCCTCTATGAT+AGG | - | chr3.1:90693582-90693601 | MS.gene52815:intron | 35.0% | |
| TTCGTCTTACAATTGCATTG+AGG | - | chr3.1:90692906-90692925 | MS.gene52815:CDS | 35.0% | |
| TTTGAATGTGCTTCAAATCG+TGG | + | chr3.1:90694660-90694679 | None:intergenic | 35.0% | |
| ! | AAATATTCTTTTGGCACAGG+TGG | + | chr3.1:90696440-90696459 | None:intergenic | 35.0% |
| ! | ACGAATTTCTTTTGTGCTCA+TGG | + | chr3.1:90694707-90694726 | None:intergenic | 35.0% |
| ! | CTTTCTTGTTCTGCTGTTTA+GGG | - | chr3.1:90693481-90693500 | MS.gene52815:intron | 35.0% |
| ! | GAATGTTCTAAATACAGGTG+TGG | - | chr3.1:90695999-90696018 | MS.gene52815:intron | 35.0% |
| ! | TACTTGCAACTTTTGCAACA+TGG | - | chr3.1:90693394-90693413 | MS.gene52815:intron | 35.0% |
| ! | TCTTTCTTGTTCTGCTGTTT+AGG | - | chr3.1:90693480-90693499 | MS.gene52815:intron | 35.0% |
| ! | TTTGTCACTGATTGTATAGG+AGG | - | chr3.1:90693941-90693960 | MS.gene52815:intron | 35.0% |
| ! | TTTTAGCAACATGCACCTTA+GGG | - | chr3.1:90695275-90695294 | MS.gene52815:intron | 35.0% |
| ! | TTTTCTTCATCCATGTGTTG+TGG | + | chr3.1:90695851-90695870 | None:intergenic | 35.0% |
| ! | TTTTCTTTGTGTGTGTTTGG+TGG | + | chr3.1:90697030-90697049 | None:intergenic | 35.0% |
| ! | TTTTTGACGGGAAATAGCAA+TGG | - | chr3.1:90693902-90693921 | MS.gene52815:intron | 35.0% |
| !! | ATTTTAGCAACATGCACCTT+AGG | - | chr3.1:90695274-90695293 | MS.gene52815:intron | 35.0% |
| !! | GAGCACTGGAATAAAAAGTA+TGG | + | chr3.1:90694737-90694756 | None:intergenic | 35.0% |
| !!! | ACTACACCGACTAGTTTTTA+TGG | - | chr3.1:90695248-90695267 | MS.gene52815:intron | 35.0% |
| !!! | TCTCTTCCTTTGTTTTTGAC+GGG | - | chr3.1:90693890-90693909 | MS.gene52815:intron | 35.0% |
| AACTTCCTTCGAGTAAGAAC+CGG | + | chr3.1:90692867-90692886 | None:intergenic | 40.0% | |
| AAGTGGTTAAATGCACCTCA+AGG | - | chr3.1:90695442-90695461 | MS.gene52815:intron | 40.0% | |
| ACTAGCTGAAGAACAAGCTT+TGG | + | chr3.1:90694199-90694218 | None:intergenic | 40.0% | |
| ACTTATTTGAGCTTGCCTAC+TGG | - | chr3.1:90693192-90693211 | MS.gene52815:intron | 40.0% | |
| AGAACAAGTGTGCACATGAA+AGG | + | chr3.1:90694869-90694888 | None:intergenic | 40.0% | |
| AGATGGAACTTGTGGAGAAA+CGG | + | chr3.1:90692720-90692739 | None:intergenic | 40.0% | |
| AGCTTATGTTGTGGAATTCC+AGG | - | chr3.1:90696603-90696622 | MS.gene52815:intron | 40.0% | |
| AGGCCATAGTTTATCTGAGA+AGG | - | chr3.1:90696289-90696308 | MS.gene52815:intron | 40.0% | |
| ATAGGAGGATGATCATGAGA+TGG | - | chr3.1:90693956-90693975 | MS.gene52815:intron | 40.0% | |
| ATCCTCCTCTGCAATATGTT+TGG | + | chr3.1:90697103-90697122 | None:intergenic | 40.0% | |
| ATCTTGTCCAACTAACGTGT+TGG | + | chr3.1:90695590-90695609 | None:intergenic | 40.0% | |
| ATGTGGTTAAATGCACCCTA+AGG | + | chr3.1:90695293-90695312 | None:intergenic | 40.0% | |
| CAACAAGTGTTTAGCTGTAG+GGG | + | chr3.1:90694018-90694037 | None:intergenic | 40.0% | |
| CAGTCCTGATGACATTATGT+CGG | + | chr3.1:90696726-90696745 | None:intergenic | 40.0% | |
| CGAACTGTCTTTATGCAGAA+AGG | - | chr3.1:90695084-90695103 | MS.gene52815:intron | 40.0% | |
| CGATTTCCCAGTGGAAAAAA+CGG | + | chr3.1:90696115-90696134 | None:intergenic | 40.0% | |
| CGTACACCCACTTATTGTTT+AGG | + | chr3.1:90695508-90695527 | None:intergenic | 40.0% | |
| CTAGTTTAACGATTTCCCAG+TGG | + | chr3.1:90696124-90696143 | None:intergenic | 40.0% | |
| CTGTCGATGTTATTGCATCT+AGG | - | chr3.1:90694250-90694269 | MS.gene52815:intron | 40.0% | |
| CTTCAACAATTGAGCTAGGA+AGG | + | chr3.1:90695758-90695777 | None:intergenic | 40.0% | |
| GAAACCTACTTGCATTGCAT+CGG | - | chr3.1:90694443-90694462 | MS.gene52815:intron | 40.0% | |
| GAAAGATGACAATGTGAAGG+AGG | + | chr3.1:90695730-90695749 | None:intergenic | 40.0% | |
| GAGATAACGACAGAACTGAA+AGG | + | chr3.1:90694902-90694921 | None:intergenic | 40.0% | |
| GATAGAACTAACATACCTGC+TGG | + | chr3.1:90694683-90694702 | None:intergenic | 40.0% | |
| GCAACAAGTGTTTAGCTGTA+GGG | + | chr3.1:90694019-90694038 | None:intergenic | 40.0% | |
| GCGAAGCAGCAAATTAAGAA+GGG | + | chr3.1:90694583-90694602 | None:intergenic | 40.0% | |
| GCTACATTGGATCATGCAAA+TGG | - | chr3.1:90696883-90696902 | MS.gene52815:CDS | 40.0% | |
| GGAAAAAACGGAAGGGAAAA+AGG | + | chr3.1:90696103-90696122 | None:intergenic | 40.0% | |
| GGTTTGAATGGAAGATGTTG+TGG | + | chr3.1:90693991-90694010 | None:intergenic | 40.0% | |
| GTAAGAACCGGTCTCAATAA+CGG | + | chr3.1:90692855-90692874 | None:intergenic | 40.0% | |
| GTTGGAGGAAGATGAAACAA+CGG | + | chr3.1:90695704-90695723 | None:intergenic | 40.0% | |
| TACGCAGACAATTTAGCATG+AGG | + | chr3.1:90692995-90693014 | None:intergenic | 40.0% | |
| TCACTACAACCTATATGACC+AGG | - | chr3.1:90694611-90694630 | MS.gene52815:intron | 40.0% | |
| TCTTCTACCTCGGGAAAATT+CGG | - | chr3.1:90694920-90694939 | MS.gene52815:intron | 40.0% | |
| TCTTGTCCAACTAACGTGTT+GGG | + | chr3.1:90695589-90695608 | None:intergenic | 40.0% | |
| TGCAAAGTAGATGGAACTTG+TGG | + | chr3.1:90692728-90692747 | None:intergenic | 40.0% | |
| TGCGAAGCAGCAAATTAAGA+AGG | + | chr3.1:90694584-90694603 | None:intergenic | 40.0% | |
| TGTCGTTATCTCTTCTACCT+CGG | - | chr3.1:90694910-90694929 | MS.gene52815:intron | 40.0% | |
| TTCTTACGCTGCAAAGTAGA+TGG | + | chr3.1:90692737-90692756 | None:intergenic | 40.0% | |
| TTGGAGGAAGATGAAACAAC+GGG | + | chr3.1:90695703-90695722 | None:intergenic | 40.0% | |
| ! | AGTACCCAACACCTTTTACA+TGG | + | chr3.1:90696243-90696262 | None:intergenic | 40.0% |
| ! | TTGGAGATTTGGAGCTGTTT+AGG | - | chr3.1:90696635-90696654 | MS.gene52815:intron | 40.0% |
| ! | TTGGTCCATGTAAAAGGTGT+TGG | - | chr3.1:90696235-90696254 | MS.gene52815:intron | 40.0% |
| !! | TGGTCCATGTAAAAGGTGTT+GGG | - | chr3.1:90696236-90696255 | MS.gene52815:intron | 40.0% |
| !!! | GGAAAAAGGCGCTTTTTTCT+GGG | + | chr3.1:90696089-90696108 | None:intergenic | 40.0% |
| AAACCTGACCCAACTCATCA+TGG | + | chr3.1:90694483-90694502 | None:intergenic | 45.0% | |
| AAAGGTTGACCACTAGGCTA+TGG | + | chr3.1:90696388-90696407 | None:intergenic | 45.0% | |
| AAATGGCACACCACAACACA+TGG | - | chr3.1:90695838-90695857 | MS.gene52815:intron | 45.0% | |
| AAATGGGTGGATGGTGTCTA+AGG | - | chr3.1:90696900-90696919 | MS.gene52815:CDS | 45.0% | |
| AAGTGTTTAGCTGTAGGGGT+AGG | + | chr3.1:90694014-90694033 | None:intergenic | 45.0% | |
| ACAATGTGAAGGAGGATGGT+TGG | + | chr3.1:90695722-90695741 | None:intergenic | 45.0% | |
| ACAGCTCCAAATCTCCAATG+CGG | + | chr3.1:90696633-90696652 | None:intergenic | 45.0% | |
| ACTAGTCGGTGTAGTGGTTA+AGG | + | chr3.1:90695243-90695262 | None:intergenic | 45.0% | |
| ACTCTTCGCCATGATGAGTT+GGG | - | chr3.1:90694472-90694491 | MS.gene52815:intron | 45.0% | |
| ACTGGCCAAACATATTGCAG+AGG | - | chr3.1:90697095-90697114 | MS.gene52815:CDS | 45.0% | |
| ACTTCTCTGCCTGGTCATAT+AGG | + | chr3.1:90694623-90694642 | None:intergenic | 45.0% | |
| AGCTAGTGAGATGCGAGAAT+AGG | + | chr3.1:90696770-90696789 | None:intergenic | 45.0% | |
| AGTGTTTAGCTGTAGGGGTA+GGG | + | chr3.1:90694013-90694032 | None:intergenic | 45.0% | |
| ATAGCGTCCGTTATTGAGAC+CGG | - | chr3.1:90692845-90692864 | MS.gene52815:CDS | 45.0% | |
| ATCTCGGTCTATCTACAGAC+TGG | + | chr3.1:90695886-90695905 | None:intergenic | 45.0% | |
| ATTGTCTGCGTATCTTCCCA+AGG | - | chr3.1:90693003-90693022 | MS.gene52815:CDS | 45.0% | |
| CAATCCGATGCAATGCAAGT+AGG | + | chr3.1:90694450-90694469 | None:intergenic | 45.0% | |
| CACAGGTGGTAACTAACTCA+GGG | + | chr3.1:90696426-90696445 | None:intergenic | 45.0% | |
| CATTGGATCATGCAAATGGG+TGG | - | chr3.1:90696887-90696906 | MS.gene52815:CDS | 45.0% | |
| CCACAAGTGTTTATGCCAGT+AGG | + | chr3.1:90693210-90693229 | None:intergenic | 45.0% | |
| CCAGATCTCCAGTAAGTTCA+TGG | + | chr3.1:90694299-90694318 | None:intergenic | 45.0% | |
| CCATGAACTTACTGGAGATC+TGG | - | chr3.1:90694296-90694315 | MS.gene52815:intron | 45.0% | |
| CCTACTGGCATAAACACTTG+TGG | - | chr3.1:90693207-90693226 | MS.gene52815:intron | 45.0% | |
| CGACATAATGTCATCAGGAC+TGG | - | chr3.1:90696724-90696743 | MS.gene52815:intron | 45.0% | |
| CTAGTCGGTGTAGTGGTTAA+GGG | + | chr3.1:90695242-90695261 | None:intergenic | 45.0% | |
| CTGGAGATCTGGCTGAAATT+CGG | - | chr3.1:90694307-90694326 | MS.gene52815:intron | 45.0% | |
| GATGACAATGTGAAGGAGGA+TGG | + | chr3.1:90695726-90695745 | None:intergenic | 45.0% | |
| GGCAACAAGTGTTTAGCTGT+AGG | + | chr3.1:90694020-90694039 | None:intergenic | 45.0% | |
| GGGCCTAAATTGTGCAAGAA+AGG | + | chr3.1:90696406-90696425 | None:intergenic | 45.0% | |
| GTCGTTATCTCTTCTACCTC+GGG | - | chr3.1:90694911-90694930 | MS.gene52815:intron | 45.0% | |
| GTCTCCGACATAATGTCATC+AGG | - | chr3.1:90696719-90696738 | MS.gene52815:intron | 45.0% | |
| GTCTCGCAAGTGTTTATGTC+AGG | + | chr3.1:90693528-90693547 | None:intergenic | 45.0% | |
| GTGTAGTGGTTAAGGGAGAT+AGG | + | chr3.1:90695235-90695254 | None:intergenic | 45.0% | |
| TCAGCATCAGCAACAGGATT+TGG | + | chr3.1:90696823-90696842 | None:intergenic | 45.0% | |
| TCCCAGTGGAAAAAACGGAA+GGG | + | chr3.1:90696110-90696129 | None:intergenic | 45.0% | |
| TGAAGCACATTCAAACCAGC+AGG | - | chr3.1:90694665-90694684 | MS.gene52815:CDS | 45.0% | |
| TGCAAGAAAGGTTGACCACT+AGG | + | chr3.1:90696394-90696413 | None:intergenic | 45.0% | |
| TGCATAAAGACAGTTCGCTC+AGG | + | chr3.1:90695081-90695100 | None:intergenic | 45.0% | |
| TGGAGATCTGGCTGAAATTC+GGG | - | chr3.1:90694308-90694327 | MS.gene52815:intron | 45.0% | |
| TGGATGGTGTCTAAGGAAAC+AGG | - | chr3.1:90696907-90696926 | MS.gene52815:CDS | 45.0% | |
| TGGGGCAATTGATGCTACAT+TGG | - | chr3.1:90696870-90696889 | MS.gene52815:CDS | 45.0% | |
| TGGGTGTACGTTAGCAAATC+CGG | - | chr3.1:90695518-90695537 | MS.gene52815:CDS | 45.0% | |
| TGTCGAAGGCTATTCGTGAT+GGG | - | chr3.1:90696851-90696870 | MS.gene52815:CDS | 45.0% | |
| TGTGGAGAAACGGAATTCGA+AGG | + | chr3.1:90692710-90692729 | None:intergenic | 45.0% | |
| TTAGCACCCAACACGTTAGT+TGG | - | chr3.1:90695580-90695599 | MS.gene52815:CDS | 45.0% | |
| TTAGCATGAGGTTCAGAACC+AGG | + | chr3.1:90692983-90693002 | None:intergenic | 45.0% | |
| TTCCCAGTGGAAAAAACGGA+AGG | + | chr3.1:90696111-90696130 | None:intergenic | 45.0% | |
| ! | GAATAGTCCGAATTTTCCCG+AGG | + | chr3.1:90694930-90694949 | None:intergenic | 45.0% |
| ! | GTTCTTCAGCTAGTGTTGCT+TGG | - | chr3.1:90694205-90694224 | MS.gene52815:intron | 45.0% |
| !!! | GGGAAAAAGGCGCTTTTTTC+TGG | + | chr3.1:90696090-90696109 | None:intergenic | 45.0% |
| !!! | TCCCTTCCGTTTTTTCCACT+GGG | - | chr3.1:90696106-90696125 | MS.gene52815:intron | 45.0% |
| !!! | TTCCCTTCCGTTTTTTCCAC+TGG | - | chr3.1:90696105-90696124 | MS.gene52815:intron | 45.0% |
| !! | AATATATAAGATTTATAAAT+AGG | + | chr3.1:90693077-90693096 | None:intergenic | 5.0% |
| !!! | TTAAATTTTTTATACAAATT+AGG | - | chr3.1:90693310-90693329 | MS.gene52815:intron | 5.0% |
| !!! | TTTTTTAATAAAGAAAAATT+GGG | + | chr3.1:90695614-90695633 | None:intergenic | 5.0% |
| AAGTGGTTGCATACGCCTTG+AGG | + | chr3.1:90695460-90695479 | None:intergenic | 50.0% | |
| ACAACAGCAAGAGCAGGAAC+TGG | - | chr3.1:90697077-90697096 | MS.gene52815:CDS | 50.0% | |
| AGAGAGACAACAGCAAGAGC+AGG | - | chr3.1:90697071-90697090 | MS.gene52815:CDS | 50.0% | |
| ATCTCAAGGCCATAGCCTAG+TGG | - | chr3.1:90696376-90696395 | MS.gene52815:intron | 50.0% | |
| ATGACCAGGCAGAGAAGTTG+AGG | - | chr3.1:90694625-90694644 | MS.gene52815:intron | 50.0% | |
| ATGAGTTCCGTCTGCACTGA+AGG | + | chr3.1:90696686-90696705 | None:intergenic | 50.0% | |
| ATGCTCTCAGCATCAGCAAC+AGG | + | chr3.1:90696829-90696848 | None:intergenic | 50.0% | |
| ATGTGAAGGAGGATGGTTGG+AGG | + | chr3.1:90695719-90695738 | None:intergenic | 50.0% | |
| CAACTCATCATGGCGAAGAG+TGG | + | chr3.1:90694473-90694492 | None:intergenic | 50.0% | |
| CACTCTTCGCCATGATGAGT+TGG | - | chr3.1:90694471-90694490 | MS.gene52815:intron | 50.0% | |
| CGAGAATTGAAAGCCAGCTG+AGG | + | chr3.1:90696955-90696974 | None:intergenic | 50.0% | |
| CTCGATCATGTTCTCACTCC+TGG | - | chr3.1:90692962-90692981 | MS.gene52815:CDS | 50.0% | |
| GAGATCTGGCTGAAATTCGG+GGG | - | chr3.1:90694310-90694329 | MS.gene52815:intron | 50.0% | |
| GCACAGGTGGTAACTAACTC+AGG | + | chr3.1:90696427-90696446 | None:intergenic | 50.0% | |
| GGAGATCTGGCTGAAATTCG+GGG | - | chr3.1:90694309-90694328 | MS.gene52815:intron | 50.0% | |
| GGAGGATGATCATGAGATGG+AGG | - | chr3.1:90693959-90693978 | MS.gene52815:intron | 50.0% | |
| GGATCATGCAAATGGGTGGA+TGG | - | chr3.1:90696891-90696910 | MS.gene52815:CDS | 50.0% | |
| GGATGATCATGAGATGGAGG+TGG | - | chr3.1:90693962-90693981 | MS.gene52815:intron | 50.0% | |
| GGCAGAGAAGTTGAGGTCAA+AGG | - | chr3.1:90694632-90694651 | MS.gene52815:intron | 50.0% | |
| GGCCAAACATATTGCAGAGG+AGG | - | chr3.1:90697098-90697117 | MS.gene52815:CDS | 50.0% | |
| GGGTGTACGTTAGCAAATCC+GGG | - | chr3.1:90695519-90695538 | MS.gene52815:CDS | 50.0% | |
| GGGTGTGCAATAGCATTACC+CGG | + | chr3.1:90695540-90695559 | None:intergenic | 50.0% | |
| GTAAAGCTCCAGTTGCAGCT+CGG | - | chr3.1:90694995-90695014 | MS.gene52815:intron | 50.0% | |
| GTCGAAGGCTATTCGTGATG+GGG | - | chr3.1:90696852-90696871 | MS.gene52815:CDS | 50.0% | |
| GTGTCGAAGGCTATTCGTGA+TGG | - | chr3.1:90696850-90696869 | MS.gene52815:CDS | 50.0% | |
| GTGTTTAGCTGTAGGGGTAG+GGG | + | chr3.1:90694012-90694031 | None:intergenic | 50.0% | |
| TAAAGCTCCAGTTGCAGCTC+GGG | - | chr3.1:90694996-90695015 | MS.gene52815:intron | 50.0% | |
| TATTCCAGTGCTCACAGCTG+TGG | - | chr3.1:90694744-90694763 | MS.gene52815:CDS | 50.0% | |
| TGTAGGGGTAGGGGTTTGAA+TGG | + | chr3.1:90694003-90694022 | None:intergenic | 50.0% | |
| TTGACCTCAACTTCTCTGCC+TGG | + | chr3.1:90694632-90694651 | None:intergenic | 50.0% | |
| ! | TGAGACCGGTTCTTACTCGA+AGG | - | chr3.1:90692859-90692878 | MS.gene52815:CDS | 50.0% |
| !! | TGCTGAGAGCATTGTGTCGA+AGG | - | chr3.1:90696837-90696856 | MS.gene52815:CDS | 50.0% |
| AAAGCTCCAGTTGCAGCTCG+GGG | - | chr3.1:90694997-90695016 | MS.gene52815:intron | 55.0% | |
| AATCTCCAATGCGGACAGCC+TGG | + | chr3.1:90696624-90696643 | None:intergenic | 55.0% | |
| AGTTCCGTCTGCACTGAAGG+TGG | + | chr3.1:90696683-90696702 | None:intergenic | 55.0% | |
| ATCACCACAGCTGTGAGCAC+TGG | + | chr3.1:90694751-90694770 | None:intergenic | 55.0% | |
| GAATTCCAGGCTGTCCGCAT+TGG | - | chr3.1:90696616-90696635 | MS.gene52815:intron | 55.0% | |
| GAGCTTTACGAGCAGCTTGC+AGG | + | chr3.1:90694984-90695003 | None:intergenic | 55.0% | |
| GCAACCACCTTCAGTGCAGA+CGG | - | chr3.1:90696676-90696695 | MS.gene52815:intron | 55.0% | |
| GGCTGTCCGCATTGGAGATT+TGG | - | chr3.1:90696624-90696643 | MS.gene52815:intron | 55.0% | |
| ! | TCGCCATGATGAGTTGGGTC+AGG | - | chr3.1:90694477-90694496 | MS.gene52815:intron | 55.0% |
| CGAAAACCCCGAGCTGCAAC+TGG | + | chr3.1:90695006-90695025 | None:intergenic | 60.0% | |
| AGCCAGCTGAGGCTCATGCG+TGG | + | chr3.1:90696944-90696963 | None:intergenic | 65.0% | |
| CTCCACGCATGAGCCTCAGC+TGG | - | chr3.1:90696939-90696958 | MS.gene52815:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 90692671 | 90697137 | 90692671 | ID=MS.gene52815 |
| chr3.1 | mRNA | 90692671 | 90697137 | 90692671 | ID=MS.gene52815.t1;Parent=MS.gene52815 |
| chr3.1 | exon | 90697059 | 90697137 | 90697059 | ID=MS.gene52815.t1.exon1;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90697059 | 90697137 | 90697059 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90696784 | 90696974 | 90696784 | ID=MS.gene52815.t1.exon2;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90696784 | 90696974 | 90696784 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90695702 | 90695848 | 90695702 | ID=MS.gene52815.t1.exon3;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90695702 | 90695848 | 90695702 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90695477 | 90695613 | 90695477 | ID=MS.gene52815.t1.exon4;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90695477 | 90695613 | 90695477 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90695310 | 90695364 | 90695310 | ID=MS.gene52815.t1.exon5;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90695310 | 90695364 | 90695310 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90695122 | 90695232 | 90695122 | ID=MS.gene52815.t1.exon6;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90695122 | 90695232 | 90695122 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90694662 | 90694901 | 90694662 | ID=MS.gene52815.t1.exon7;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90694662 | 90694901 | 90694662 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| chr3.1 | exon | 90692671 | 90693183 | 90692671 | ID=MS.gene52815.t1.exon8;Parent=MS.gene52815.t1 |
| chr3.1 | CDS | 90692671 | 90693183 | 90692671 | ID=cds.MS.gene52815.t1;Parent=MS.gene52815.t1 |
| Gene Sequence |
| Protein sequence |
