Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044658.t1 | XP_003598694.1 | 97.3 | 291 | 8 | 0 | 1 | 291 | 1 | 291 | 7.00E-160 | 573.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044658.t1 | Q0VD01 | 54.8 | 292 | 127 | 3 | 1 | 291 | 1 | 288 | 2.3e-87 | 323.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044658.t1 | G7IW56 | 97.3 | 291 | 8 | 0 | 1 | 291 | 1 | 291 | 5.1e-160 | 573.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044658.t1 | MTR_3g019370 | 97.251 | 291 | 8 | 0 | 1 | 291 | 1 | 291 | 0.0 | 586 |
| MS.gene044658.t1 | MTR_8g023820 | 33.219 | 292 | 142 | 7 | 50 | 291 | 66 | 354 | 3.38e-41 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044658.t1 | AT1G63780 | 73.288 | 292 | 77 | 1 | 1 | 291 | 1 | 292 | 5.16e-164 | 457 |
| MS.gene044658.t1 | AT4G01560 | 34.437 | 302 | 162 | 9 | 14 | 291 | 54 | 343 | 1.46e-41 | 147 |
Find 54 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGTCCTACTGCATATTT+TGG | 0.152617 | 3.1:+11642319 | MS.gene044658:CDS |
| TCCTTCAATTCTACAGATTT+AGG | 0.221306 | 3.1:-11644256 | None:intergenic |
| CATTCTAAAACATCTGTTTC+CGG | 0.297484 | 3.1:+11644016 | MS.gene044658:CDS |
| CGATTCATTCTTTCAGCATT+GGG | 0.364675 | 3.1:-11641195 | None:intergenic |
| TCATCATCAATGTGTGATCT+TGG | 0.367314 | 3.1:-11640941 | None:intergenic |
| AATAATATGCGGATAAGCTT+CGG | 0.371784 | 3.1:-11642471 | None:intergenic |
| TCTGTAGAATTGAAGGAAAT+TGG | 0.387754 | 3.1:+11644262 | MS.gene044658:CDS |
| ATAGTTTGTCATCTACCATA+TGG | 0.392644 | 3.1:+11642301 | MS.gene044658:CDS |
| TGACTATACAGATGTTATCT+TGG | 0.414988 | 3.1:+11642246 | MS.gene044658:CDS |
| CGAGATATAGTCAGACTTGT+TGG | 0.426562 | 3.1:-11644075 | None:intergenic |
| AGTCTGACTATATCTCGTTC+AGG | 0.430003 | 3.1:+11644081 | MS.gene044658:CDS |
| ATAATATGCGGATAAGCTTC+GGG | 0.448452 | 3.1:-11642470 | None:intergenic |
| TCCTAAATCTGTAGAATTGA+AGG | 0.458118 | 3.1:+11644255 | MS.gene044658:CDS |
| AACTGTTTGAGTGGAGCGCT+TGG | 0.459070 | 3.1:-11641019 | None:intergenic |
| GAGTGGAGCGCTTGGATCCC+TGG | 0.464338 | 3.1:-11641011 | None:intergenic |
| ACGATTCATTCTTTCAGCAT+TGG | 0.464351 | 3.1:-11641196 | None:intergenic |
| TGACAAACTATTAAACCATC+TGG | 0.466080 | 3.1:-11642289 | None:intergenic |
| GTTGTTCCTTGCAGGTTACA+AGG | 0.469398 | 3.1:+11642411 | MS.gene044658:intron |
| AAATATGCAGTAGGACCATA+TGG | 0.471997 | 3.1:-11642316 | None:intergenic |
| CATCATCAATGTGTGATCTT+GGG | 0.478264 | 3.1:-11640940 | None:intergenic |
| AAATTCTGCTGACCACATCC+AGG | 0.485156 | 3.1:+11640993 | MS.gene044658:CDS |
| TTCCGTGTAGTGTTCATGTA+AGG | 0.489124 | 3.1:-11644976 | None:intergenic |
| ACTTCGTCGCGAAATTGATC+TGG | 0.491295 | 3.1:+11638967 | MS.gene044658:CDS |
| CTGGAGGATGAAAACACATC+TGG | 0.494752 | 3.1:+11638986 | MS.gene044658:CDS |
| TCCACTCAAACAGTTTGTAA+AGG | 0.502089 | 3.1:+11641027 | MS.gene044658:CDS |
| ACCTTTACAAACTGTTTGAG+TGG | 0.503052 | 3.1:-11641028 | None:intergenic |
| ATCAATTTCGCGACGAAGTG+CGG | 0.507344 | 3.1:-11638963 | None:intergenic |
| AAAGTTAGAGAAGCTCTTCG+AGG | 0.508327 | 3.1:+11638799 | MS.gene044658:CDS |
| AAGAATGAATCGTGGTGGTC+AGG | 0.523960 | 3.1:+11641206 | MS.gene044658:CDS |
| AGCTTCGGGCATGGTTCCAA+CGG | 0.525645 | 3.1:-11642456 | None:intergenic |
| GCAGATAAAATTAGGAACAG+TGG | 0.540090 | 3.1:+11644918 | MS.gene044658:intron |
| GCATCATATATATGAAAAGC+AGG | 0.552365 | 3.1:+11644228 | MS.gene044658:CDS |
| ACATGAACACTACACGGAAG+AGG | 0.568800 | 3.1:+11644980 | MS.gene044658:CDS |
| GATACTCTCTTCGCAAACGT+TGG | 0.576621 | 3.1:-11638723 | None:intergenic |
| AGCGCTTGGATCCCTGGATG+TGG | 0.588133 | 3.1:-11641005 | None:intergenic |
| AGTAATCCAAAATATGCAGT+AGG | 0.590553 | 3.1:-11642325 | None:intergenic |
| TCCTCGTTTCTCAGCTCAGT+AGG | 0.592322 | 3.1:-11638938 | None:intergenic |
| GCTGTAACCAGTTAGGTGAA+AGG | 0.593902 | 3.1:+11643985 | MS.gene044658:intron |
| ATTAGAGACAGAAAAGCCGT+TGG | 0.603528 | 3.1:+11642440 | MS.gene044658:CDS |
| CATCTGTATAGTCATGTGAT+CGG | 0.609305 | 3.1:-11642237 | None:intergenic |
| TCGTCGCGAAATTGATCTGG+AGG | 0.623681 | 3.1:+11638970 | MS.gene044658:CDS |
| AATTCTGCTGACCACATCCA+GGG | 0.624410 | 3.1:+11640994 | MS.gene044658:CDS |
| CATATATATGAAAAGCAGGC+GGG | 0.633112 | 3.1:+11644232 | MS.gene044658:CDS |
| ATGCGGATAAGCTTCGGGCA+TGG | 0.635152 | 3.1:-11642465 | None:intergenic |
| GAACACCGAGGTGTGCCAGA+TGG | 0.638084 | 3.1:+11642274 | MS.gene044658:CDS |
| GACCTTACATGAACACTACA+CGG | 0.644746 | 3.1:+11644974 | MS.gene044658:CDS |
| TCATATATATGAAAAGCAGG+CGG | 0.651248 | 3.1:+11644231 | MS.gene044658:CDS |
| ACCTACTGAGCTGAGAAACG+AGG | 0.675140 | 3.1:+11638937 | MS.gene044658:CDS |
| TTAAACCATCTGGCACACCT+CGG | 0.692377 | 3.1:-11642279 | None:intergenic |
| TATAGACGCAACTCAAAACG+TGG | 0.698081 | 3.1:-11644286 | None:intergenic |
| AAATTATCAAGAATAATATG+CGG | 0.698309 | 3.1:-11642482 | None:intergenic |
| GCTGAAAGAATGAATCGTGG+TGG | 0.764437 | 3.1:+11641201 | MS.gene044658:CDS |
| AATGCTGAAAGAATGAATCG+TGG | 0.776928 | 3.1:+11641198 | MS.gene044658:CDS |
| ATCTTGGTTCATGAACACCG+AGG | 0.787086 | 3.1:+11642262 | MS.gene044658:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAATATTGAATTATTAT+TGG | - | chr3.1:11644467-11644486 | None:intergenic | 10.0% |
| !! | ATTAAAAACATTAATAAATC+AGG | - | chr3.1:11641878-11641897 | None:intergenic | 10.0% |
| !! | TTAAAAACATTAATAAATCA+GGG | - | chr3.1:11641877-11641896 | None:intergenic | 10.0% |
| !! | TTTATAGTATTATTTAAGAA+AGG | + | chr3.1:11640511-11640530 | MS.gene044658:intron | 10.0% |
| !!! | AATAATAATTCAATATTTTC+TGG | + | chr3.1:11644466-11644485 | MS.gene044658:intron | 10.0% |
| !!! | AATATCATCATTATTTTTTT+AGG | - | chr3.1:11642177-11642196 | None:intergenic | 10.0% |
| !!! | GTTTATTTATTTTTTGAATT+GGG | + | chr3.1:11639400-11639419 | MS.gene044658:intron | 10.0% |
| !!! | TGTTTATTTATTTTTTGAAT+TGG | + | chr3.1:11639399-11639418 | MS.gene044658:intron | 10.0% |
| !! | AAATTATCAAGAATAATATG+CGG | - | chr3.1:11642485-11642504 | None:intergenic | 15.0% |
| !! | AATATGGAAAATTGATTATT+TGG | + | chr3.1:11641280-11641299 | MS.gene044658:intron | 15.0% |
| !! | ACAAGAAAATATTGAATTAT+TGG | - | chr3.1:11644526-11644545 | None:intergenic | 15.0% |
| !! | AGTATTATAATTGATATAGA+TGG | - | chr3.1:11643693-11643712 | None:intergenic | 15.0% |
| !! | ATAAATAATAATTGCATGAA+AGG | + | chr3.1:11640314-11640333 | MS.gene044658:intron | 15.0% |
| !! | ATTTCTATAACAAAAGATAA+AGG | + | chr3.1:11639528-11639547 | MS.gene044658:intron | 15.0% |
| !! | GGCATATAATTAAAAAAATA+TGG | - | chr3.1:11643348-11643367 | None:intergenic | 15.0% |
| !! | TAATATTAGATAATATGCTT+GGG | + | chr3.1:11641496-11641515 | MS.gene044658:intron | 15.0% |
| !! | TATGTGAAGTATAAAATATT+TGG | - | chr3.1:11641084-11641103 | None:intergenic | 15.0% |
| !! | TTAATATTAGATAATATGCT+TGG | + | chr3.1:11641495-11641514 | MS.gene044658:intron | 15.0% |
| !!! | AAATAATTTATTTGCTATTG+TGG | + | chr3.1:11641952-11641971 | MS.gene044658:intron | 15.0% |
| !!! | ATAGCAAATAAATTATTTTG+AGG | - | chr3.1:11641950-11641969 | None:intergenic | 15.0% |
| !!! | ATTTTTTGGTATTAAACTTT+AGG | - | chr3.1:11644888-11644907 | None:intergenic | 15.0% |
| !!! | GCTTTTATGTTAATTTATAA+TGG | - | chr3.1:11639174-11639193 | None:intergenic | 15.0% |
| !!! | TCATTGTTTTATTTATATTG+AGG | - | chr3.1:11643225-11643244 | None:intergenic | 15.0% |
| !!! | TCATTTTTTTTTTTTTGTGT+AGG | + | chr3.1:11641155-11641174 | MS.gene044658:intron | 15.0% |
| !!! | TGAGTAAATTTTGTAAATAA+TGG | + | chr3.1:11639044-11639063 | MS.gene044658:intron | 15.0% |
| !! | AAATGTAATGTGTAAAATGT+TGG | - | chr3.1:11641604-11641623 | None:intergenic | 20.0% |
| !! | AACATTAGAAATACTTCATT+TGG | + | chr3.1:11642772-11642791 | MS.gene044658:intron | 20.0% |
| !! | AATATTAGATAATATGCTTG+GGG | + | chr3.1:11641497-11641516 | MS.gene044658:intron | 20.0% |
| !! | ACAAAAACTATATAGAGATA+TGG | - | chr3.1:11641690-11641709 | None:intergenic | 20.0% |
| !! | ATCAAAATATAGAATGATTG+TGG | + | chr3.1:11642650-11642669 | MS.gene044658:intron | 20.0% |
| !! | ATGGTTAATATTAATAACAC+AGG | - | chr3.1:11643329-11643348 | None:intergenic | 20.0% |
| !! | CTAATCAACTCTTATTATTA+GGG | - | chr3.1:11643133-11643152 | None:intergenic | 20.0% |
| !! | CTTAATCTTATTATGTAAGT+CGG | - | chr3.1:11643017-11643036 | None:intergenic | 20.0% |
| !! | GCAATTATTATTTATTTCAG+TGG | - | chr3.1:11640309-11640328 | None:intergenic | 20.0% |
| !! | GGAATTATAGTTATTTACTT+CGG | + | chr3.1:11640742-11640761 | MS.gene044658:intron | 20.0% |
| !! | TAAGTAAAATTAAACGATGT+AGG | + | chr3.1:11642716-11642735 | MS.gene044658:intron | 20.0% |
| !! | TAATCAACTCTTATTATTAG+GGG | - | chr3.1:11643132-11643151 | None:intergenic | 20.0% |
| !! | TAATTGCTAAAAAAAACTCA+TGG | - | chr3.1:11640084-11640103 | None:intergenic | 20.0% |
| !! | TATATTGAGGTTATATTCAA+TGG | - | chr3.1:11643212-11643231 | None:intergenic | 20.0% |
| !! | TATTACTATTTAAACCACAT+TGG | + | chr3.1:11640102-11640121 | MS.gene044658:intron | 20.0% |
| !! | TATTAGTATATTAACTTCAG+AGG | - | chr3.1:11641464-11641483 | None:intergenic | 20.0% |
| !! | TATTTGCATAAGCTTAAAAT+AGG | - | chr3.1:11639103-11639122 | None:intergenic | 20.0% |
| !! | TCATAAAAACCAAATTTCAA+AGG | - | chr3.1:11640805-11640824 | None:intergenic | 20.0% |
| !! | TCTAATCAACTCTTATTATT+AGG | - | chr3.1:11643134-11643153 | None:intergenic | 20.0% |
| !! | TTCAAGAGAATATCTATTAT+TGG | - | chr3.1:11644563-11644582 | None:intergenic | 20.0% |
| !!! | AATATCTTGAATTTTATGAG+TGG | + | chr3.1:11640685-11640704 | MS.gene044658:intron | 20.0% |
| !!! | AATTTTGTTGTTTTTGTAGA+GGG | + | chr3.1:11638905-11638924 | MS.gene044658:intron | 20.0% |
| !!! | ATATATTCCATATGTTTTTG+TGG | + | chr3.1:11643495-11643514 | MS.gene044658:intron | 20.0% |
| !!! | ATTTGGATTTTCAATTCTTT+TGG | - | chr3.1:11641361-11641380 | None:intergenic | 20.0% |
| !!! | CAATGCAAAAATATTTTCAA+GGG | - | chr3.1:11641795-11641814 | None:intergenic | 20.0% |
| !!! | CTTTTTTGCATTATTGTTAA+TGG | + | chr3.1:11640049-11640068 | MS.gene044658:intron | 20.0% |
| !!! | TAATTTTGTTGTTTTTGTAG+AGG | + | chr3.1:11638904-11638923 | MS.gene044658:intron | 20.0% |
| !!! | TATATTCCATATGTTTTTGT+GGG | + | chr3.1:11643496-11643515 | MS.gene044658:intron | 20.0% |
| !!! | TCTTGATAATTTTGAAACTA+AGG | + | chr3.1:11642493-11642512 | MS.gene044658:CDS | 20.0% |
| !!! | TTAAACTTTAGGAATAAGAT+TGG | - | chr3.1:11644877-11644896 | None:intergenic | 20.0% |
| !!! | TTAATTTTCACACTGTTATT+TGG | + | chr3.1:11641893-11641912 | MS.gene044658:intron | 20.0% |
| !!! | TTATGTAGAAAGTACAATAA+TGG | - | chr3.1:11641652-11641671 | None:intergenic | 20.0% |
| !!! | TTGTAAATAATGGTTCTATT+TGG | + | chr3.1:11639054-11639073 | MS.gene044658:intron | 20.0% |
| !!! | TTTATTTTTTGAATTGGGAA+AGG | + | chr3.1:11639405-11639424 | MS.gene044658:intron | 20.0% |
| !!! | TTTGTACATACTAATTTTAC+TGG | + | chr3.1:11642546-11642565 | MS.gene044658:intron | 20.0% |
| ! | AAAGATGAAATGAAGTAAAG+TGG | + | chr3.1:11639637-11639656 | MS.gene044658:intron | 25.0% |
| ! | AAAGTCCAAAAATTATCAGA+AGG | - | chr3.1:11642607-11642626 | None:intergenic | 25.0% |
| ! | AAGCACTTATTAAATGTAGT+TGG | - | chr3.1:11643639-11643658 | None:intergenic | 25.0% |
| ! | AATGTAGTTGGGAAATAAAA+AGG | - | chr3.1:11643627-11643646 | None:intergenic | 25.0% |
| ! | AATTGATATAGATGGTGATT+AGG | - | chr3.1:11643685-11643704 | None:intergenic | 25.0% |
| ! | AGCACTTATTAAATGTAGTT+GGG | - | chr3.1:11643638-11643657 | None:intergenic | 25.0% |
| ! | GCACATATAGAAAATGATAA+CGG | - | chr3.1:11641256-11641275 | None:intergenic | 25.0% |
| ! | GCATGTTATATCATATATAC+TGG | + | chr3.1:11641814-11641833 | MS.gene044658:intron | 25.0% |
| ! | GCTTAAACCAAAAAAAATGT+TGG | - | chr3.1:11642061-11642080 | None:intergenic | 25.0% |
| ! | TATAACGCTGATGAATAAAT+TGG | + | chr3.1:11640652-11640671 | MS.gene044658:intron | 25.0% |
| ! | TCAGTACTTCAATCATAATT+TGG | - | chr3.1:11642934-11642953 | None:intergenic | 25.0% |
| ! | TGAAATAACCTGAAATGAAA+GGG | - | chr3.1:11642200-11642219 | None:intergenic | 25.0% |
| ! | TGTTGCATTAGCAAAAATAT+GGG | + | chr3.1:11641390-11641409 | MS.gene044658:intron | 25.0% |
| ! | TTATGTCAGTTAAGAATCAT+GGG | + | chr3.1:11640409-11640428 | MS.gene044658:intron | 25.0% |
| ! | TTCTATATGTGCTTGTAATA+TGG | + | chr3.1:11641264-11641283 | MS.gene044658:intron | 25.0% |
| ! | TTGTGATTATTGATCATGTT+TGG | + | chr3.1:11639318-11639337 | MS.gene044658:intron | 25.0% |
| ! | TTTATGTCAGTTAAGAATCA+TGG | + | chr3.1:11640408-11640427 | MS.gene044658:intron | 25.0% |
| !! | AAAAAGTTGATTATCCAAAC+AGG | - | chr3.1:11639555-11639574 | None:intergenic | 25.0% |
| !! | AACCATTTTGTATCAACTTT+CGG | + | chr3.1:11644621-11644640 | MS.gene044658:intron | 25.0% |
| !! | AACCTTTTGCAGATAAAATT+AGG | + | chr3.1:11644910-11644929 | MS.gene044658:intron | 25.0% |
| !! | AACTATTACTGATTAGTTAG+AGG | - | chr3.1:11642131-11642150 | None:intergenic | 25.0% |
| !! | ATTTAACTTTGTCTCTCATA+TGG | + | chr3.1:11640868-11640887 | MS.gene044658:intron | 25.0% |
| !! | CTGCTCATAAAATTTCTTTT+TGG | + | chr3.1:11643963-11643982 | MS.gene044658:intron | 25.0% |
| !! | CTTATGCAAATAAGCTTTTA+TGG | + | chr3.1:11639111-11639130 | MS.gene044658:intron | 25.0% |
| !! | GCAATGCAAAAATATTTTCA+AGG | - | chr3.1:11641796-11641815 | None:intergenic | 25.0% |
| !! | GTGTTAACTCTATAGATTTT+AGG | + | chr3.1:11642371-11642390 | MS.gene044658:intron | 25.0% |
| !! | TTCCTAATTTTATCTGCAAA+AGG | - | chr3.1:11644915-11644934 | None:intergenic | 25.0% |
| !! | TTTAACTTTGTCTCTCATAT+GGG | + | chr3.1:11640869-11640888 | MS.gene044658:intron | 25.0% |
| !!! | AAACAGATGTTTTAGAATGT+TGG | - | chr3.1:11644015-11644034 | None:intergenic | 25.0% |
| !!! | AGAGCACTTTTATCAATTTT+TGG | + | chr3.1:11640721-11640740 | MS.gene044658:intron | 25.0% |
| !!! | ATATTTTGGATTACTCAATG+TGG | + | chr3.1:11642333-11642352 | MS.gene044658:CDS | 25.0% |
| !!! | ATTTTGTTGTTTTTGTAGAG+GGG | + | chr3.1:11638906-11638925 | MS.gene044658:intron | 25.0% |
| !!! | CAGAAAGGTAATTATTTTTG+CGG | - | chr3.1:11643783-11643802 | None:intergenic | 25.0% |
| !!! | TCAACTTTTTTGTAGCTTAT+AGG | + | chr3.1:11639565-11639584 | MS.gene044658:intron | 25.0% |
| !!! | TGTTTTAAAATGTTAGTGTG+TGG | + | chr3.1:11640017-11640036 | MS.gene044658:intron | 25.0% |
| !!! | TGTTTTGAATACTGCAAAAA+AGG | - | chr3.1:11642683-11642702 | None:intergenic | 25.0% |
| AAACATAAAAGCTTATAGCG+TGG | + | chr3.1:11639230-11639249 | MS.gene044658:intron | 30.0% | |
| AACCAAAAAAAATGTTGGAC+AGG | - | chr3.1:11642056-11642075 | None:intergenic | 30.0% | |
| AATAATATGCGGATAAGCTT+CGG | - | chr3.1:11642474-11642493 | None:intergenic | 30.0% | |
| ACTATTTAAACCACATTGGT+TGG | + | chr3.1:11640106-11640125 | MS.gene044658:intron | 30.0% | |
| ACTGTAAACAGTTATGTGAA+AGG | + | chr3.1:11643859-11643878 | MS.gene044658:intron | 30.0% | |
| AGGTCAATTTGGAAAAGATT+AGG | + | chr3.1:11643421-11643440 | MS.gene044658:intron | 30.0% | |
| AGTAATCCAAAATATGCAGT+AGG | - | chr3.1:11642328-11642347 | None:intergenic | 30.0% | |
| ATGATATTCCCTTTCATTTC+AGG | + | chr3.1:11642189-11642208 | MS.gene044658:intron | 30.0% | |
| ATGCAACAGCAGTAAATATT+TGG | - | chr3.1:11641378-11641397 | None:intergenic | 30.0% | |
| CAACTTATGACATTGTTCAT+AGG | - | chr3.1:11639720-11639739 | None:intergenic | 30.0% | |
| CTATACAGAAAAAGCTTAGA+AGG | + | chr3.1:11638745-11638764 | MS.gene044658:CDS | 30.0% | |
| CTGAAATAACCTGAAATGAA+AGG | - | chr3.1:11642201-11642220 | None:intergenic | 30.0% | |
| CTGTTAACTTTCTCTTGTTA+CGG | + | chr3.1:11644163-11644182 | MS.gene044658:intron | 30.0% | |
| CTGTTGCATTAGCAAAAATA+TGG | + | chr3.1:11641389-11641408 | MS.gene044658:intron | 30.0% | |
| GAAATACTTCATTTGGAGAA+TGG | + | chr3.1:11642779-11642798 | MS.gene044658:intron | 30.0% | |
| GATAAGCACTTATCATGATA+AGG | - | chr3.1:11639260-11639279 | None:intergenic | 30.0% | |
| GCATCATATATATGAAAAGC+AGG | + | chr3.1:11644228-11644247 | MS.gene044658:CDS | 30.0% | |
| GCTAGTAGATAAGCTTAAAT+AGG | + | chr3.1:11639935-11639954 | MS.gene044658:intron | 30.0% | |
| GTTATATTGCTCCAATTACA+AGG | - | chr3.1:11640638-11640657 | None:intergenic | 30.0% | |
| TAAAATAGGCCTAATCCAAA+CGG | - | chr3.1:11639089-11639108 | None:intergenic | 30.0% | |
| TAAGCTCAGTAGAATGATTA+AGG | + | chr3.1:11643160-11643179 | MS.gene044658:intron | 30.0% | |
| TATAATTGATATCCGACCTT+AGG | + | chr3.1:11643401-11643420 | MS.gene044658:intron | 30.0% | |
| TATAGCATATACGCAGTTTA+TGG | + | chr3.1:11644676-11644695 | MS.gene044658:intron | 30.0% | |
| TCAATTAAGCCAATGCAAAT+AGG | + | chr3.1:11639792-11639811 | MS.gene044658:intron | 30.0% | |
| TCAGTTAAGGTTGAATTGAT+CGG | + | chr3.1:11640154-11640173 | MS.gene044658:intron | 30.0% | |
| TCATATATATGAAAAGCAGG+CGG | + | chr3.1:11644231-11644250 | MS.gene044658:CDS | 30.0% | |
| TCCAAAAATTATCAGAAGGT+CGG | - | chr3.1:11642603-11642622 | None:intergenic | 30.0% | |
| TCCTAAATCTGTAGAATTGA+AGG | + | chr3.1:11644255-11644274 | MS.gene044658:CDS | 30.0% | |
| TCCTTCAATTCTACAGATTT+AGG | - | chr3.1:11644259-11644278 | None:intergenic | 30.0% | |
| TCTGTAGAATTGAAGGAAAT+TGG | + | chr3.1:11644262-11644281 | MS.gene044658:CDS | 30.0% | |
| TCTTGGAGAACTTATGAAAA+CGG | + | chr3.1:11639694-11639713 | MS.gene044658:intron | 30.0% | |
| TGACAAACTATTAAACCATC+TGG | - | chr3.1:11642292-11642311 | None:intergenic | 30.0% | |
| TGACTATACAGATGTTATCT+TGG | + | chr3.1:11642246-11642265 | MS.gene044658:CDS | 30.0% | |
| TTAACTTTGTCTCTCATATG+GGG | + | chr3.1:11640870-11640889 | MS.gene044658:intron | 30.0% | |
| TTACCTTTAGTTAGCATCTT+AGG | + | chr3.1:11639483-11639502 | MS.gene044658:intron | 30.0% | |
| TTCAATCATAATTTGGACCA+GGG | - | chr3.1:11642927-11642946 | None:intergenic | 30.0% | |
| TTTCAATGTGAACATATGCT+TGG | - | chr3.1:11643541-11643560 | None:intergenic | 30.0% | |
| TTTCTTCCCACAAAAACATA+TGG | - | chr3.1:11643505-11643524 | None:intergenic | 30.0% | |
| ! | AAGCAGTGTTACTATTGTTA+TGG | - | chr3.1:11643927-11643946 | None:intergenic | 30.0% |
| ! | ACGCTATAAGCTTTTATGTT+TGG | - | chr3.1:11639231-11639250 | None:intergenic | 30.0% |
| ! | ACTCATAAAAGCCTTGTAAT+TGG | + | chr3.1:11640624-11640643 | MS.gene044658:intron | 30.0% |
| ! | AGTACAATAATGGAACATAG+TGG | - | chr3.1:11641642-11641661 | None:intergenic | 30.0% |
| ! | AGTGTTACTATTGTTATGGA+TGG | - | chr3.1:11643923-11643942 | None:intergenic | 30.0% |
| ! | ATAGTTTGTCATCTACCATA+TGG | + | chr3.1:11642301-11642320 | MS.gene044658:CDS | 30.0% |
| ! | ATCTTTTCCAAATTGACCTA+AGG | - | chr3.1:11643420-11643439 | None:intergenic | 30.0% |
| ! | CATACTAATTTTACTGGCAA+TGG | + | chr3.1:11642552-11642571 | MS.gene044658:intron | 30.0% |
| ! | CTATTTAAACCACATTGGTT+GGG | + | chr3.1:11640107-11640126 | MS.gene044658:intron | 30.0% |
| ! | GAACAAAATTGTTCTAGCTA+TGG | - | chr3.1:11640197-11640216 | None:intergenic | 30.0% |
| ! | TGGCATTCCAAATCTATTTT+AGG | - | chr3.1:11640769-11640788 | None:intergenic | 30.0% |
| ! | TGGCTTATTTAGAGTTTCTA+TGG | + | chr3.1:11641834-11641853 | MS.gene044658:intron | 30.0% |
| ! | TTTTGGACTTTCAGTATCAT+TGG | + | chr3.1:11642616-11642635 | MS.gene044658:intron | 30.0% |
| !! | AACCGAAAGTTGATACAAAA+TGG | - | chr3.1:11644626-11644645 | None:intergenic | 30.0% |
| !! | AATGATAACGGAGGATAAAA+TGG | - | chr3.1:11641244-11641263 | None:intergenic | 30.0% |
| !! | CATATAGAAAATGATAACGG+AGG | - | chr3.1:11641253-11641272 | None:intergenic | 30.0% |
| !! | CATTCTAAAACATCTGTTTC+CGG | + | chr3.1:11644016-11644035 | MS.gene044658:CDS | 30.0% |
| !! | CTTTGTTGTTAGCAATTGTA+TGG | + | chr3.1:11644343-11644362 | MS.gene044658:intron | 30.0% |
| !! | TCAGGTTAGTTTCATTTATC+TGG | + | chr3.1:11644099-11644118 | MS.gene044658:intron | 30.0% |
| !!! | AATGTTTTAGCCAAATGCTA+TGG | - | chr3.1:11642758-11642777 | None:intergenic | 30.0% |
| !!! | AATTTTTTTGAAATCGACGC+AGG | + | chr3.1:11644816-11644835 | MS.gene044658:intron | 30.0% |
| !!! | ACTTTTGAGCCTTTGAAATT+TGG | + | chr3.1:11640793-11640812 | MS.gene044658:intron | 30.0% |
| !!! | ATTATTTTGAGGCATACATG+AGG | - | chr3.1:11641939-11641958 | None:intergenic | 30.0% |
| !!! | CAGAATTTTAGGATCTTTCT+CGG | - | chr3.1:11640981-11641000 | None:intergenic | 30.0% |
| !!! | CTGCAAAAGGTTTCATTTTT+TGG | - | chr3.1:11644902-11644921 | None:intergenic | 30.0% |
| !!! | GCTTTTTTCATAAGCTTTCT+TGG | + | chr3.1:11639677-11639696 | MS.gene044658:intron | 30.0% |
| AAAATAGGCCTAATCCAAAC+GGG | - | chr3.1:11639088-11639107 | None:intergenic | 35.0% | |
| AAATATGCAGTAGGACCATA+TGG | - | chr3.1:11642319-11642338 | None:intergenic | 35.0% | |
| AACGGAGGATAAAATGGTAA+AGG | - | chr3.1:11641238-11641257 | None:intergenic | 35.0% | |
| AAGAAACAGATCAATCATGC+AGG | - | chr3.1:11642824-11642843 | None:intergenic | 35.0% | |
| AAGCTGTTTACAGTCCAAAT+TGG | - | chr3.1:11643725-11643744 | None:intergenic | 35.0% | |
| AATGACCTTCAGTTCAGTTA+AGG | + | chr3.1:11640141-11640160 | MS.gene044658:intron | 35.0% | |
| AATGCTGAAAGAATGAATCG+TGG | + | chr3.1:11641198-11641217 | MS.gene044658:CDS | 35.0% | |
| AATTATATGCCGTGTACTCA+TGG | + | chr3.1:11643357-11643376 | MS.gene044658:intron | 35.0% | |
| AATTTGGACTGTAAACAGCT+TGG | + | chr3.1:11643724-11643743 | MS.gene044658:intron | 35.0% | |
| ACAAGTCTAGCAATCAATCA+TGG | + | chr3.1:11642885-11642904 | MS.gene044658:intron | 35.0% | |
| ACACCTAAGATGCTAACTAA+AGG | - | chr3.1:11639489-11639508 | None:intergenic | 35.0% | |
| ACCTTTACAAACTGTTTGAG+TGG | - | chr3.1:11641031-11641050 | None:intergenic | 35.0% | |
| ACGATTCATTCTTTCAGCAT+TGG | - | chr3.1:11641199-11641218 | None:intergenic | 35.0% | |
| AGAAAGGTGACATTTCATTC+AGG | + | chr3.1:11640527-11640546 | MS.gene044658:intron | 35.0% | |
| AGCATCTAATGAGGAAAAGA+TGG | + | chr3.1:11643059-11643078 | MS.gene044658:intron | 35.0% | |
| ATAAATAGCCCGTTTGGATT+AGG | + | chr3.1:11639077-11639096 | MS.gene044658:intron | 35.0% | |
| ATAATATGCGGATAAGCTTC+GGG | - | chr3.1:11642473-11642492 | None:intergenic | 35.0% | |
| ATATTGTATCTGCTGCATAC+AGG | + | chr3.1:11644206-11644225 | MS.gene044658:intron | 35.0% | |
| ATGACTCTGTTTATTCGATC+TGG | + | chr3.1:11642013-11642032 | MS.gene044658:intron | 35.0% | |
| ATGTATTTACAGCTTCTCGA+AGG | + | chr3.1:11640472-11640491 | MS.gene044658:intron | 35.0% | |
| ATTATATGCCGTGTACTCAT+GGG | + | chr3.1:11643358-11643377 | MS.gene044658:intron | 35.0% | |
| ATTTGGATAAATAGCCCGTT+TGG | + | chr3.1:11639071-11639090 | MS.gene044658:intron | 35.0% | |
| CAAAAGATAAAGGTCCTGTT+TGG | + | chr3.1:11639538-11639557 | MS.gene044658:intron | 35.0% | |
| CAGTTAAGGTTGAATTGATC+GGG | + | chr3.1:11640155-11640174 | MS.gene044658:intron | 35.0% | |
| CATAACATCCTCTTTGAATC+AGG | + | chr3.1:11641438-11641457 | MS.gene044658:intron | 35.0% | |
| CATATATATGAAAAGCAGGC+GGG | + | chr3.1:11644232-11644251 | MS.gene044658:CDS | 35.0% | |
| CATCATCAATGTGTGATCTT+GGG | - | chr3.1:11640943-11640962 | None:intergenic | 35.0% | |
| CATCTGTATAGTCATGTGAT+CGG | - | chr3.1:11642240-11642259 | None:intergenic | 35.0% | |
| CCTCGAAGACAATTGTAAAA+TGG | + | chr3.1:11640274-11640293 | MS.gene044658:intron | 35.0% | |
| CGATTCATTCTTTCAGCATT+GGG | - | chr3.1:11641198-11641217 | None:intergenic | 35.0% | |
| CTTATTATTAGGGGCTTCTA+GGG | - | chr3.1:11643123-11643142 | None:intergenic | 35.0% | |
| CTTCAATCATAATTTGGACC+AGG | - | chr3.1:11642928-11642947 | None:intergenic | 35.0% | |
| CTTCGGACCTAAAATAGATT+TGG | + | chr3.1:11640759-11640778 | MS.gene044658:intron | 35.0% | |
| GCAGATAAAATTAGGAACAG+TGG | + | chr3.1:11644918-11644937 | MS.gene044658:intron | 35.0% | |
| TCAGAAGGTCGGATAAATAA+CGG | - | chr3.1:11642592-11642611 | None:intergenic | 35.0% | |
| TCATCATCAATGTGTGATCT+TGG | - | chr3.1:11640944-11640963 | None:intergenic | 35.0% | |
| TCCACTCAAACAGTTTGTAA+AGG | + | chr3.1:11641027-11641046 | MS.gene044658:CDS | 35.0% | |
| TCGAGAAGCTGTAAATACAT+TGG | - | chr3.1:11640472-11640491 | None:intergenic | 35.0% | |
| TCTTATTATTAGGGGCTTCT+AGG | - | chr3.1:11643124-11643143 | None:intergenic | 35.0% | |
| TGTTGTTAGCAATTGTATGG+AGG | + | chr3.1:11644346-11644365 | MS.gene044658:intron | 35.0% | |
| TTCAACCTTAACTGAACTGA+AGG | - | chr3.1:11640149-11640168 | None:intergenic | 35.0% | |
| TTGTGTCTCTTGTAGTTACA+TGG | - | chr3.1:11640245-11640264 | None:intergenic | 35.0% | |
| TTTCCAAATTGACCTAAGGT+CGG | - | chr3.1:11643416-11643435 | None:intergenic | 35.0% | |
| ! | AATAATGGAACATAGTGGTC+TGG | - | chr3.1:11641637-11641656 | None:intergenic | 35.0% |
| ! | ATAATGGAACATAGTGGTCT+GGG | - | chr3.1:11641636-11641655 | None:intergenic | 35.0% |
| ! | CCATTTTACAATTGTCTTCG+AGG | - | chr3.1:11640277-11640296 | None:intergenic | 35.0% |
| ! | GAGATATGGTTTTTGTGCTA+TGG | - | chr3.1:11641676-11641695 | None:intergenic | 35.0% |
| ! | GTGTCACTAGTATTACAGAA+AGG | - | chr3.1:11643798-11643817 | None:intergenic | 35.0% |
| ! | TATGGTCCTACTGCATATTT+TGG | + | chr3.1:11642319-11642338 | MS.gene044658:CDS | 35.0% |
| ! | TCCGACCTTCTGATAATTTT+TGG | + | chr3.1:11642599-11642618 | MS.gene044658:intron | 35.0% |
| !! | ATACGTTTTGTGTCTGGTTT+TGG | - | chr3.1:11644044-11644063 | None:intergenic | 35.0% |
| !! | ATACTGCTTTTGTGCCAATT+TGG | + | chr3.1:11643708-11643727 | MS.gene044658:intron | 35.0% |
| !! | ATTTGGAGAATGGTTTTACG+AGG | + | chr3.1:11642789-11642808 | MS.gene044658:intron | 35.0% |
| !! | GCTGTTTTCATAGACTATCT+TGG | + | chr3.1:11639853-11639872 | MS.gene044658:intron | 35.0% |
| !!! | TGCCTGTCCAACATTTTTTT+TGG | + | chr3.1:11642051-11642070 | MS.gene044658:intron | 35.0% |
| !!! | TTTTGAGTTGCGTCTATATC+AGG | + | chr3.1:11644291-11644310 | MS.gene044658:CDS | 35.0% |
| AAAGTTAGAGAAGCTCTTCG+AGG | + | chr3.1:11638799-11638818 | MS.gene044658:CDS | 40.0% | |
| AACCATACAATGGGCATGTT+TGG | - | chr3.1:11639966-11639985 | None:intergenic | 40.0% | |
| AAGATTAGGTGCTCTATCAC+TGG | + | chr3.1:11643435-11643454 | MS.gene044658:intron | 40.0% | |
| ACTAAAGGTAAGAGACCTCA+AGG | - | chr3.1:11639474-11639493 | None:intergenic | 40.0% | |
| AGACCAACTCAAGAACAGAT+CGG | - | chr3.1:11644495-11644514 | None:intergenic | 40.0% | |
| AGTCTGACTATATCTCGTTC+AGG | + | chr3.1:11644081-11644100 | MS.gene044658:CDS | 40.0% | |
| ATAACCCTTGTGAGACTGTT+TGG | - | chr3.1:11639915-11639934 | None:intergenic | 40.0% | |
| ATCCAAACATGCCCATTGTA+TGG | + | chr3.1:11639961-11639980 | MS.gene044658:intron | 40.0% | |
| ATGCAGAGTAGCATCTAATG+AGG | + | chr3.1:11643050-11643069 | MS.gene044658:intron | 40.0% | |
| ATTAGAGACAGAAAAGCCGT+TGG | + | chr3.1:11642440-11642459 | MS.gene044658:CDS | 40.0% | |
| CAATGTGAACATATGCTTGG+TGG | - | chr3.1:11643538-11643557 | None:intergenic | 40.0% | |
| CACTTAACTTATGCTCTTGC+AGG | - | chr3.1:11642969-11642988 | None:intergenic | 40.0% | |
| CACTTTGAGCCTATTTGCAT+TGG | - | chr3.1:11639804-11639823 | None:intergenic | 40.0% | |
| CAGAAGGTCGGATAAATAAC+GGG | - | chr3.1:11642591-11642610 | None:intergenic | 40.0% | |
| CAGTGAGTTCAGTGTAACTA+CGG | - | chr3.1:11641122-11641141 | None:intergenic | 40.0% | |
| CGAGATATAGTCAGACTTGT+TGG | - | chr3.1:11644078-11644097 | None:intergenic | 40.0% | |
| CTCTATCACTGGAATACTTG+TGG | + | chr3.1:11643446-11643465 | MS.gene044658:intron | 40.0% | |
| CTTCTTTGACAAGAAGCAAG+AGG | - | chr3.1:11641549-11641568 | None:intergenic | 40.0% | |
| CTTTGAATTGTGCTGCAACT+GGG | + | chr3.1:11644417-11644436 | MS.gene044658:intron | 40.0% | |
| GACCTTACATGAACACTACA+CGG | + | chr3.1:11644974-11644993 | MS.gene044658:CDS | 40.0% | |
| GCTAATATGTTGTTCCTTGC+AGG | + | chr3.1:11642403-11642422 | MS.gene044658:intron | 40.0% | |
| TAACCCTTGTGAGACTGTTT+GGG | - | chr3.1:11639914-11639933 | None:intergenic | 40.0% | |
| TACAATGGGCATGTTTGGAT+TGG | - | chr3.1:11639961-11639980 | None:intergenic | 40.0% | |
| TATAGACGCAACTCAAAACG+TGG | - | chr3.1:11644289-11644308 | None:intergenic | 40.0% | |
| TATCCGACCTTAGGTCAATT+TGG | + | chr3.1:11643410-11643429 | MS.gene044658:intron | 40.0% | |
| TCAAAGGCTCAAAAGTCTTC+TGG | - | chr3.1:11640789-11640808 | None:intergenic | 40.0% | |
| TCAAATACCCCATGAGTACA+CGG | - | chr3.1:11643369-11643388 | None:intergenic | 40.0% | |
| TGTTTCTTGCGTCTCTAACT+TGG | + | chr3.1:11644589-11644608 | MS.gene044658:intron | 40.0% | |
| TTATATGCCGTGTACTCATG+GGG | + | chr3.1:11643359-11643378 | MS.gene044658:intron | 40.0% | |
| TTCCGTGTAGTGTTCATGTA+AGG | - | chr3.1:11644979-11644998 | None:intergenic | 40.0% | |
| TTTCCGATCTGTTCTTGAGT+TGG | + | chr3.1:11644489-11644508 | MS.gene044658:intron | 40.0% | |
| ! | ACTGTAAACAGCTTGGTGAA+AGG | + | chr3.1:11643731-11643750 | MS.gene044658:intron | 40.0% |
| ! | CTGTAAACAGCTTGGTGAAA+GGG | + | chr3.1:11643732-11643751 | MS.gene044658:intron | 40.0% |
| ! | GATGTGGTCAGCAGAATTTT+AGG | - | chr3.1:11640992-11641011 | None:intergenic | 40.0% |
| ! | GTGACAATACGTTTTGTGTC+TGG | - | chr3.1:11644050-11644069 | None:intergenic | 40.0% |
| ! | TCAATCATGGTTCTGTTGAC+AGG | + | chr3.1:11642898-11642917 | MS.gene044658:intron | 40.0% |
| !! | AAAGCATTTTTCCACGAGGT+CGG | - | chr3.1:11643266-11643285 | None:intergenic | 40.0% |
| !! | CAACAAAGCATTTTTCCACG+AGG | - | chr3.1:11643270-11643289 | None:intergenic | 40.0% |
| !! | TCGGATAAATAACGGGTGAA+AGG | - | chr3.1:11642584-11642603 | None:intergenic | 40.0% |
| !!! | CTTTTTGGCTGTAACCAGTT+AGG | + | chr3.1:11643978-11643997 | MS.gene044658:intron | 40.0% |
| !!! | GTGACGCTGTTTTGAAGAAT+TGG | - | chr3.1:11639749-11639768 | None:intergenic | 40.0% |
| AAATTCTGCTGACCACATCC+AGG | + | chr3.1:11640993-11641012 | MS.gene044658:CDS | 45.0% | |
| AAGAATGAATCGTGGTGGTC+AGG | + | chr3.1:11641206-11641225 | MS.gene044658:CDS | 45.0% | |
| AATTCTGCTGACCACATCCA+GGG | + | chr3.1:11640994-11641013 | MS.gene044658:CDS | 45.0% | |
| ACATGAACACTACACGGAAG+AGG | + | chr3.1:11644980-11644999 | MS.gene044658:CDS | 45.0% | |
| ACCGTGATGTCCATAGCATT+TGG | + | chr3.1:11642745-11642764 | MS.gene044658:intron | 45.0% | |
| ACGTGTACAGTAGTTTAGCC+AGG | + | chr3.1:11643089-11643108 | MS.gene044658:intron | 45.0% | |
| ACTGGAATACTTGTGGACGT+AGG | + | chr3.1:11643453-11643472 | MS.gene044658:intron | 45.0% | |
| ACTTCGTCGCGAAATTGATC+TGG | + | chr3.1:11638967-11638986 | MS.gene044658:CDS | 45.0% | |
| AGATCAATCATGCAGGAGAC+TGG | - | chr3.1:11642817-11642836 | None:intergenic | 45.0% | |
| ATCAATTTCGCGACGAAGTG+CGG | - | chr3.1:11638966-11638985 | None:intergenic | 45.0% | |
| ATCTTGGTTCATGAACACCG+AGG | + | chr3.1:11642262-11642281 | MS.gene044658:CDS | 45.0% | |
| CTGGAGGATGAAAACACATC+TGG | + | chr3.1:11638986-11639005 | MS.gene044658:CDS | 45.0% | |
| GACAAGAAGCAAGAGGAGTA+AGG | - | chr3.1:11641542-11641561 | None:intergenic | 45.0% | |
| GAGCTGTAGTAGTTAGAGCA+TGG | + | chr3.1:11640219-11640238 | MS.gene044658:intron | 45.0% | |
| GATACTCTCTTCGCAAACGT+TGG | - | chr3.1:11638726-11638745 | None:intergenic | 45.0% | |
| GATTCATATAACCGACCTCG+TGG | + | chr3.1:11643252-11643271 | MS.gene044658:intron | 45.0% | |
| GCCAAATGCTATGGACATCA+CGG | - | chr3.1:11642749-11642768 | None:intergenic | 45.0% | |
| GCTGAAAGAATGAATCGTGG+TGG | + | chr3.1:11641201-11641220 | MS.gene044658:CDS | 45.0% | |
| GCTGTAACCAGTTAGGTGAA+AGG | + | chr3.1:11643985-11644004 | MS.gene044658:intron | 45.0% | |
| GTTGTTCCTTGCAGGTTACA+AGG | + | chr3.1:11642411-11642430 | MS.gene044658:intron | 45.0% | |
| TACTGAAACTCAGCACCTTG+AGG | + | chr3.1:11639456-11639475 | MS.gene044658:intron | 45.0% | |
| TCCCTCAGCAACCATACAAT+GGG | - | chr3.1:11639975-11639994 | None:intergenic | 45.0% | |
| TCTCCCAAACAGTCTCACAA+GGG | + | chr3.1:11639908-11639927 | MS.gene044658:intron | 45.0% | |
| TTAAACCATCTGGCACACCT+CGG | - | chr3.1:11642282-11642301 | None:intergenic | 45.0% | |
| TTATGCTCTTGCAGGCGATT+AGG | - | chr3.1:11642961-11642980 | None:intergenic | 45.0% | |
| TTCAGAGGCCTGATTCAAAG+AGG | - | chr3.1:11641449-11641468 | None:intergenic | 45.0% | |
| TTCATGCCTTGTAACCTGCA+AGG | - | chr3.1:11642420-11642439 | None:intergenic | 45.0% | |
| TTCCCTCAGCAACCATACAA+TGG | - | chr3.1:11639976-11639995 | None:intergenic | 45.0% | |
| TTCTCCCAAACAGTCTCACA+AGG | + | chr3.1:11639907-11639926 | MS.gene044658:intron | 45.0% | |
| TTGAGGCATACATGAGGAAC+AGG | - | chr3.1:11641933-11641952 | None:intergenic | 45.0% | |
| TTGTCTCTCATATGGGGAGT+GGG | + | chr3.1:11640876-11640895 | MS.gene044658:intron | 45.0% | |
| TTGTGTTCATCCACGTGTAC+TGG | + | chr3.1:11643303-11643322 | MS.gene044658:intron | 45.0% | |
| TTTGTCTCTCATATGGGGAG+TGG | + | chr3.1:11640875-11640894 | MS.gene044658:intron | 45.0% | |
| ! | GCTTTGAATTGTGCTGCAAC+TGG | + | chr3.1:11644416-11644435 | MS.gene044658:intron | 45.0% |
| !!! | TTTGTGTCTGGTTTTGGCAC+CGG | - | chr3.1:11644038-11644057 | None:intergenic | 45.0% |
| !! | TTAATGAATTATTATATTTA+AGG | - | chr3.1:11642099-11642118 | None:intergenic | 5.0% |
| ACCTACTGAGCTGAGAAACG+AGG | + | chr3.1:11638937-11638956 | MS.gene044658:CDS | 50.0% | |
| ATAACACAGGCCAGTACACG+TGG | - | chr3.1:11643316-11643335 | None:intergenic | 50.0% | |
| ATATGGGGAGTGGGGTTTGA+TGG | + | chr3.1:11640885-11640904 | MS.gene044658:intron | 50.0% | |
| ATGAATCGTGGTGGTCAGGT+TGG | + | chr3.1:11641210-11641229 | MS.gene044658:intron | 50.0% | |
| GCCCATTGTATGGTTGCTGA+GGG | + | chr3.1:11639971-11639990 | MS.gene044658:intron | 50.0% | |
| GTTCTGTTGACAGGTTACCC+TGG | + | chr3.1:11642907-11642926 | MS.gene044658:intron | 50.0% | |
| GTTGCTGAGGGAATGAGCAT+GGG | + | chr3.1:11639983-11640002 | MS.gene044658:intron | 50.0% | |
| TATGGGGAGTGGGGTTTGAT+GGG | + | chr3.1:11640886-11640905 | MS.gene044658:intron | 50.0% | |
| TCCTCGTTTCTCAGCTCAGT+AGG | - | chr3.1:11638941-11638960 | None:intergenic | 50.0% | |
| TCGTCGCGAAATTGATCTGG+AGG | + | chr3.1:11638970-11638989 | MS.gene044658:CDS | 50.0% | |
| TGCCCATTGTATGGTTGCTG+AGG | + | chr3.1:11639970-11639989 | MS.gene044658:intron | 50.0% | |
| TGGCAGTCCTTTCACCTAAC+TGG | - | chr3.1:11643995-11644014 | None:intergenic | 50.0% | |
| TGTCTCTCATATGGGGAGTG+GGG | + | chr3.1:11640877-11640896 | MS.gene044658:intron | 50.0% | |
| ! | AACTGTTTGAGTGGAGCGCT+TGG | - | chr3.1:11641022-11641041 | None:intergenic | 50.0% |
| AGCTTCGGGCATGGTTCCAA+CGG | - | chr3.1:11642459-11642478 | None:intergenic | 55.0% | |
| ATGCGGATAAGCTTCGGGCA+TGG | - | chr3.1:11642468-11642487 | None:intergenic | 55.0% | |
| GCTCTTGCAGGCGATTAGGT+GGG | - | chr3.1:11642957-11642976 | None:intergenic | 55.0% | |
| GGTTGCTGAGGGAATGAGCA+TGG | + | chr3.1:11639982-11640001 | MS.gene044658:intron | 55.0% | |
| TGCTCTTGCAGGCGATTAGG+TGG | - | chr3.1:11642958-11642977 | None:intergenic | 55.0% | |
| !! | GCTTCTAGGGTCTTCTCACC+TGG | - | chr3.1:11643110-11643129 | None:intergenic | 55.0% |
| AGCGCTTGGATCCCTGGATG+TGG | - | chr3.1:11641008-11641027 | None:intergenic | 60.0% | |
| CCACTCGAGCCCAACCAATG+TGG | - | chr3.1:11640119-11640138 | None:intergenic | 60.0% | |
| GAACACCGAGGTGTGCCAGA+TGG | + | chr3.1:11642274-11642293 | MS.gene044658:CDS | 60.0% | |
| ! | CCACATTGGTTGGGCTCGAG+TGG | + | chr3.1:11640116-11640135 | MS.gene044658:intron | 60.0% |
| ! | GAGTGGAGCGCTTGGATCCC+TGG | - | chr3.1:11641014-11641033 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 11638709 | 11645014 | 11638709 | ID=MS.gene044658 |
| chr3.1 | mRNA | 11638709 | 11645014 | 11638709 | ID=MS.gene044658.t1;Parent=MS.gene044658 |
| chr3.1 | exon | 11638709 | 11638820 | 11638709 | ID=MS.gene044658.t1.exon1;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11638709 | 11638820 | 11638709 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11638924 | 11639007 | 11638924 | ID=MS.gene044658.t1.exon2;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11638924 | 11639007 | 11638924 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11640939 | 11641048 | 11640939 | ID=MS.gene044658.t1.exon3;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11640939 | 11641048 | 11640939 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11641177 | 11641227 | 11641177 | ID=MS.gene044658.t1.exon4;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11641177 | 11641227 | 11641177 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11642211 | 11642354 | 11642211 | ID=MS.gene044658.t1.exon5;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11642211 | 11642354 | 11642211 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11642425 | 11642514 | 11642425 | ID=MS.gene044658.t1.exon6;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11642425 | 11642514 | 11642425 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11643996 | 11644102 | 11643996 | ID=MS.gene044658.t1.exon7;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11643996 | 11644102 | 11643996 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11644228 | 11644312 | 11644228 | ID=MS.gene044658.t1.exon8;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11644228 | 11644312 | 11644228 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| chr3.1 | exon | 11644922 | 11645014 | 11644922 | ID=MS.gene044658.t1.exon9;Parent=MS.gene044658.t1 |
| chr3.1 | CDS | 11644922 | 11645014 | 11644922 | ID=cds.MS.gene044658.t1;Parent=MS.gene044658.t1 |
| Gene Sequence |
| Protein sequence |
