Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053596.t1 | XP_003608372.2 | 98 | 537 | 11 | 0 | 1 | 537 | 1 | 537 | 1.40E-291 | 1011.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053596.t1 | Q0WM29 | 78.1 | 526 | 112 | 2 | 12 | 536 | 83 | 606 | 8.6e-237 | 820.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053596.t1 | G7JU35 | 98.0 | 537 | 11 | 0 | 1 | 537 | 1 | 537 | 1.0e-291 | 1011.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050800 | MS.gene053596 | 0.821488 | 3.93E-53 | -1.69E-46 |
MS.gene053596 | MS.gene063746 | 0.811301 | 7.50E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053596.t1 | MTR_4g093170 | 97.952 | 537 | 11 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1089 |
MS.gene053596.t1 | MTR_2g009750 | 84.630 | 514 | 73 | 1 | 24 | 537 | 3 | 510 | 0.0 | 911 |
MS.gene053596.t1 | MTR_2g009750 | 84.436 | 514 | 73 | 2 | 24 | 537 | 3 | 509 | 0.0 | 905 |
MS.gene053596.t1 | MTR_2g009750 | 84.436 | 514 | 72 | 2 | 24 | 537 | 3 | 508 | 0.0 | 904 |
MS.gene053596.t1 | MTR_2g067660 | 30.608 | 477 | 320 | 7 | 41 | 514 | 46 | 514 | 5.64e-66 | 223 |
MS.gene053596.t1 | MTR_6g086300 | 31.185 | 481 | 307 | 11 | 45 | 514 | 25 | 492 | 3.21e-59 | 204 |
MS.gene053596.t1 | MTR_6g086300 | 31.185 | 481 | 307 | 11 | 45 | 514 | 25 | 492 | 3.21e-59 | 204 |
MS.gene053596.t1 | MTR_6g086340 | 31.643 | 493 | 311 | 12 | 37 | 514 | 9 | 490 | 7.84e-58 | 201 |
MS.gene053596.t1 | MTR_3g078170 | 32.422 | 512 | 316 | 14 | 25 | 520 | 41 | 538 | 1.59e-57 | 201 |
MS.gene053596.t1 | MTR_8g083530 | 30.943 | 488 | 315 | 12 | 36 | 514 | 19 | 493 | 2.40e-57 | 199 |
MS.gene053596.t1 | MTR_8g064170 | 30.829 | 519 | 316 | 14 | 25 | 520 | 39 | 537 | 2.34e-56 | 197 |
MS.gene053596.t1 | MTR_4g107040 | 32.112 | 464 | 294 | 10 | 24 | 474 | 42 | 497 | 2.54e-55 | 195 |
MS.gene053596.t1 | MTR_3g078550 | 27.824 | 478 | 319 | 10 | 59 | 518 | 25 | 494 | 1.27e-53 | 189 |
MS.gene053596.t1 | MTR_3g078170 | 33.803 | 426 | 255 | 12 | 25 | 434 | 41 | 455 | 5.70e-52 | 184 |
MS.gene053596.t1 | MTR_8g083520 | 29.314 | 481 | 283 | 12 | 45 | 514 | 17 | 451 | 4.20e-50 | 179 |
MS.gene053596.t1 | MTR_3g078550 | 28.017 | 464 | 308 | 10 | 73 | 518 | 9 | 464 | 6.19e-50 | 179 |
MS.gene053596.t1 | MTR_3g078490 | 26.939 | 490 | 315 | 9 | 59 | 524 | 55 | 525 | 2.95e-48 | 175 |
MS.gene053596.t1 | MTR_4g106510 | 28.601 | 479 | 321 | 9 | 59 | 524 | 25 | 495 | 3.23e-47 | 172 |
MS.gene053596.t1 | MTR_1g014320 | 28.000 | 475 | 320 | 9 | 48 | 513 | 22 | 483 | 8.16e-47 | 171 |
MS.gene053596.t1 | MTR_3g078170 | 33.333 | 405 | 243 | 12 | 25 | 413 | 41 | 434 | 1.58e-45 | 166 |
MS.gene053596.t1 | MTR_3g078170 | 33.416 | 401 | 240 | 12 | 25 | 409 | 41 | 430 | 1.74e-45 | 166 |
MS.gene053596.t1 | MTR_4g131180 | 27.459 | 488 | 325 | 11 | 37 | 513 | 14 | 483 | 2.39e-45 | 167 |
MS.gene053596.t1 | MTR_4g131180 | 27.394 | 449 | 299 | 10 | 37 | 474 | 14 | 446 | 1.23e-43 | 161 |
MS.gene053596.t1 | MTR_8g064170 | 28.324 | 519 | 297 | 15 | 25 | 520 | 39 | 505 | 1.88e-42 | 159 |
MS.gene053596.t1 | MTR_2g042330 | 25.918 | 463 | 325 | 7 | 42 | 495 | 22 | 475 | 4.13e-41 | 155 |
MS.gene053596.t1 | MTR_8g083520 | 29.257 | 417 | 240 | 11 | 107 | 514 | 1 | 371 | 3.13e-39 | 147 |
MS.gene053596.t1 | MTR_1690s0010 | 32.164 | 342 | 216 | 8 | 45 | 376 | 12 | 347 | 1.15e-38 | 145 |
MS.gene053596.t1 | MTR_8g083530 | 31.118 | 331 | 217 | 8 | 36 | 359 | 19 | 345 | 4.67e-35 | 135 |
MS.gene053596.t1 | MTR_3g078490 | 27.217 | 327 | 204 | 5 | 59 | 363 | 25 | 339 | 1.77e-28 | 117 |
MS.gene053596.t1 | MTR_1399s0020 | 26.142 | 394 | 236 | 5 | 125 | 517 | 1 | 340 | 1.85e-28 | 116 |
MS.gene053596.t1 | MTR_2g034160 | 25.116 | 430 | 311 | 7 | 54 | 474 | 61 | 488 | 1.38e-27 | 117 |
MS.gene053596.t1 | MTR_8g094600 | 27.479 | 353 | 238 | 9 | 174 | 521 | 166 | 505 | 2.83e-22 | 100 |
MS.gene053596.t1 | MTR_8g076480 | 25.558 | 403 | 281 | 10 | 80 | 474 | 8 | 399 | 6.59e-22 | 99.4 |
MS.gene053596.t1 | MTR_1g029840 | 26.075 | 372 | 249 | 11 | 174 | 537 | 113 | 466 | 7.89e-20 | 92.8 |
MS.gene053596.t1 | MTR_1g029840 | 26.075 | 372 | 249 | 11 | 174 | 537 | 113 | 466 | 9.04e-20 | 92.8 |
MS.gene053596.t1 | MTR_3g088150 | 26.885 | 305 | 208 | 8 | 174 | 474 | 115 | 408 | 3.52e-18 | 87.8 |
MS.gene053596.t1 | MTR_2g097950 | 27.010 | 311 | 203 | 9 | 174 | 474 | 117 | 413 | 3.36e-17 | 84.7 |
MS.gene053596.t1 | MTR_1222s0010 | 28.114 | 281 | 186 | 6 | 175 | 453 | 104 | 370 | 1.12e-15 | 80.5 |
MS.gene053596.t1 | MTR_4g065040 | 26.837 | 313 | 201 | 10 | 174 | 474 | 102 | 398 | 1.78e-15 | 79.3 |
MS.gene053596.t1 | MTR_1314s0010 | 24.069 | 349 | 241 | 8 | 177 | 514 | 1 | 336 | 6.14e-13 | 70.5 |
MS.gene053596.t1 | MTR_2g097950 | 25.490 | 306 | 179 | 9 | 174 | 474 | 117 | 378 | 9.82e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053596.t1 | AT2G14170 | 78.327 | 526 | 111 | 2 | 12 | 536 | 83 | 606 | 0.0 | 862 |
MS.gene053596.t1 | AT2G14170 | 81.250 | 496 | 91 | 1 | 41 | 536 | 4 | 497 | 0.0 | 852 |
MS.gene053596.t1 | AT2G14170 | 79.268 | 492 | 101 | 1 | 12 | 502 | 83 | 574 | 0.0 | 818 |
MS.gene053596.t1 | AT1G79440 | 32.427 | 478 | 310 | 8 | 41 | 514 | 52 | 520 | 3.26e-59 | 205 |
MS.gene053596.t1 | AT1G23800 | 31.481 | 486 | 311 | 13 | 45 | 520 | 57 | 530 | 3.12e-55 | 194 |
MS.gene053596.t1 | AT3G24503 | 28.926 | 484 | 329 | 9 | 45 | 521 | 23 | 498 | 6.29e-55 | 193 |
MS.gene053596.t1 | AT3G48170 | 29.065 | 492 | 330 | 9 | 45 | 524 | 11 | 495 | 2.52e-54 | 191 |
MS.gene053596.t1 | AT3G48000 | 30.099 | 505 | 327 | 11 | 22 | 514 | 38 | 528 | 6.86e-53 | 188 |
MS.gene053596.t1 | AT1G74920 | 28.719 | 484 | 324 | 11 | 45 | 515 | 11 | 486 | 1.93e-51 | 183 |
MS.gene053596.t1 | AT1G74920 | 28.512 | 484 | 320 | 12 | 45 | 515 | 11 | 481 | 2.42e-48 | 175 |
MS.gene053596.t1 | AT2G24270 | 26.415 | 477 | 325 | 10 | 48 | 513 | 22 | 483 | 1.33e-44 | 165 |
MS.gene053596.t1 | AT2G24270 | 26.415 | 477 | 325 | 10 | 48 | 513 | 22 | 483 | 1.47e-44 | 164 |
MS.gene053596.t1 | AT2G24270 | 26.415 | 477 | 325 | 10 | 48 | 513 | 22 | 483 | 1.47e-44 | 164 |
MS.gene053596.t1 | AT2G24270 | 26.255 | 518 | 350 | 12 | 7 | 513 | 27 | 523 | 1.63e-44 | 165 |
MS.gene053596.t1 | AT1G54100 | 25.446 | 448 | 316 | 7 | 58 | 495 | 35 | 474 | 3.07e-41 | 155 |
MS.gene053596.t1 | AT1G54100 | 25.446 | 448 | 316 | 7 | 58 | 495 | 35 | 474 | 3.07e-41 | 155 |
MS.gene053596.t1 | AT1G23800 | 34.395 | 314 | 193 | 9 | 45 | 350 | 57 | 365 | 8.86e-36 | 138 |
MS.gene053596.t1 | AT3G66658 | 23.953 | 430 | 316 | 6 | 54 | 474 | 61 | 488 | 4.21e-29 | 121 |
MS.gene053596.t1 | AT3G66658 | 23.953 | 430 | 316 | 6 | 54 | 474 | 61 | 488 | 5.72e-29 | 121 |
MS.gene053596.t1 | AT1G44170 | 25.143 | 350 | 242 | 11 | 174 | 517 | 46 | 381 | 3.87e-21 | 96.3 |
MS.gene053596.t1 | AT1G44170 | 25.143 | 350 | 242 | 11 | 174 | 517 | 109 | 444 | 5.24e-21 | 96.7 |
MS.gene053596.t1 | AT1G44170 | 25.143 | 350 | 242 | 11 | 174 | 517 | 109 | 444 | 5.24e-21 | 96.7 |
MS.gene053596.t1 | AT4G36250 | 25.959 | 443 | 297 | 13 | 89 | 516 | 16 | 442 | 7.21e-20 | 93.2 |
MS.gene053596.t1 | AT4G34240 | 27.778 | 306 | 204 | 9 | 174 | 474 | 30 | 323 | 1.10e-17 | 85.9 |
MS.gene053596.t1 | AT4G34240 | 24.939 | 409 | 271 | 14 | 79 | 474 | 80 | 465 | 1.45e-17 | 86.3 |
MS.gene053596.t1 | AT4G34240 | 24.939 | 409 | 271 | 14 | 79 | 474 | 65 | 450 | 1.58e-17 | 86.3 |
Find 125 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAAGGGTTCCCAATCTTAT+TGG | 0.207386 | 4.4:-21527811 | MS.gene053596:CDS |
ATTTGGTGTGCAGTCTAATA+TGG | 0.210485 | 4.4:-21525979 | MS.gene053596:intron |
GCTTTAGTTGCTGCTGGTTT+TGG | 0.210605 | 4.4:-21525900 | MS.gene053596:CDS |
CTTCCACTGATCGCTATAAA+AGG | 0.210956 | 4.4:-21527828 | MS.gene053596:CDS |
AAAGGGTTCCCAATCTTATT+GGG | 0.284247 | 4.4:-21527810 | MS.gene053596:CDS |
GGAGATGTGTTTCGTGGTTT+AGG | 0.290732 | 4.4:-21527298 | MS.gene053596:intron |
ACTTCTATATTTACTTCTTC+TGG | 0.306729 | 4.4:-21524214 | MS.gene053596:CDS |
CAAACCTGTTTGCTGATAAC+TGG | 0.309419 | 4.4:+21525361 | None:intergenic |
TTCTATGATGCTTGCAGAAT+TGG | 0.311099 | 4.4:-21526723 | MS.gene053596:CDS |
GGCAACAAGGCGTCATTTGC+TGG | 0.335914 | 4.4:-21523905 | MS.gene053596:CDS |
ACACGTTGGCGCGTCGTAAC+TGG | 0.345070 | 4.4:+21527542 | None:intergenic |
CTTCAGTGTCTTTCCTTGTT+CGG | 0.357016 | 4.4:+21527330 | None:intergenic |
AGCGTTTACTTTAAGAGCTT+TGG | 0.358538 | 4.4:+21525411 | None:intergenic |
ATGCCTCAGATCTCTGCTTT+CGG | 0.359917 | 4.4:-21527883 | MS.gene053596:CDS |
ACCTCCATGAAAAGAAGAAC+TGG | 0.370811 | 4.4:+21524482 | None:intergenic |
GTGCACAGATTAGTTCAATC+TGG | 0.390956 | 4.4:-21525216 | MS.gene053596:CDS |
ATTGGAGCCAACAAATGATA+TGG | 0.397690 | 4.4:+21526376 | None:intergenic |
TGTTGAATTGCAGGCAAAGC+AGG | 0.397895 | 4.4:-21523244 | MS.gene053596:intron |
GTGGAACATGCTTGTGGAAT+GGG | 0.416900 | 4.4:-21527163 | MS.gene053596:CDS |
TTTATATCATTTAGAGGTGG+TGG | 0.417923 | 4.4:-21527182 | MS.gene053596:intron |
TCTTCCATCAAGCAGTAGTC+TGG | 0.420204 | 4.4:+21525179 | None:intergenic |
AGCTAAAGGGAAGCGTGTTC+AGG | 0.424616 | 4.4:-21526083 | MS.gene053596:intron |
ATCCACAATGGAATCATTGC+GGG | 0.425299 | 4.4:+21527034 | None:intergenic |
ATCAAAGCCATATCATTTGT+TGG | 0.429517 | 4.4:-21526383 | MS.gene053596:CDS |
GCAGAATTGGCACTGGAAGC+TGG | 0.430921 | 4.4:-21526710 | MS.gene053596:CDS |
CTTCTTCTGGTGTTGCTGCT+AGG | 0.433241 | 4.4:-21524201 | MS.gene053596:CDS |
TGGTCCAGTTATCAGCAAAC+AGG | 0.440028 | 4.4:-21525365 | MS.gene053596:intron |
GTAAATGCTTTAGTTGCTGC+TGG | 0.441142 | 4.4:-21525906 | MS.gene053596:CDS |
TCACCTGGGTCTTTCTCTGA+TGG | 0.443595 | 4.4:+21526968 | None:intergenic |
AAATTGCCAGATTCATATCC+TGG | 0.446066 | 4.4:+21524685 | None:intergenic |
TAGGTCCCAGGATATGAATC+TGG | 0.446613 | 4.4:-21524691 | MS.gene053596:CDS |
GACTGAGATTGAGGCTGGGC+AGG | 0.446706 | 4.4:-21524170 | MS.gene053596:intron |
GGTGTCTTAAATGTTGTTCA+TGG | 0.452942 | 4.4:-21526677 | MS.gene053596:CDS |
GGTGCCAGACTACTGCTTGA+TGG | 0.455239 | 4.4:-21525183 | MS.gene053596:CDS |
TTTCAGACTGAGATTGAGGC+TGG | 0.456700 | 4.4:-21524175 | MS.gene053596:CDS |
GTTGAGCCGCTGTTGAGAAA+TGG | 0.457193 | 4.4:+21527854 | None:intergenic |
AGCTGCTGGGCAAAGGTGCA+TGG | 0.458588 | 4.4:-21525877 | MS.gene053596:CDS |
ACGGAACCTGATGCAGATCT+TGG | 0.459081 | 4.4:-21525385 | MS.gene053596:CDS |
TTTGGTGTGCAGTCTAATAT+GGG | 0.459672 | 4.4:-21525978 | MS.gene053596:intron |
GGAGCTTATACGCAGAGATA+TGG | 0.460147 | 4.4:-21527504 | MS.gene053596:intron |
TGCTGTATCTGCAGCTAAGA+AGG | 0.460432 | 4.4:-21527588 | MS.gene053596:CDS |
TATTCAAGAGCAGCAGCTAA+AGG | 0.462757 | 4.4:-21526097 | MS.gene053596:CDS |
ATCCCAGCACAAACACCAAT+TGG | 0.470380 | 4.4:+21527073 | None:intergenic |
AACGGCAAAGGAACTGGAAT+AGG | 0.471453 | 4.4:+21523941 | None:intergenic |
ATTCAAGAGCAGCAGCTAAA+GGG | 0.475145 | 4.4:-21526096 | MS.gene053596:CDS |
AACTCATCATCCGTAGTCAA+TGG | 0.477816 | 4.4:+21527617 | None:intergenic |
ATTTCCAACAGGTATGGAAA+TGG | 0.479189 | 4.4:-21524238 | MS.gene053596:intron |
GAACCAATTGGTGTTTGTGC+TGG | 0.479759 | 4.4:-21527076 | MS.gene053596:CDS |
TGGAATGGGAACTCTACAAA+TGG | 0.483756 | 4.4:-21527149 | MS.gene053596:CDS |
CTGGAAGCTGGTTTGCCTGA+GGG | 0.487867 | 4.4:-21526698 | MS.gene053596:CDS |
CACTTACAGGGTTTAAAACA+TGG | 0.492044 | 4.4:+21527752 | None:intergenic |
TGCACAGATTAGTTCAATCT+GGG | 0.495573 | 4.4:-21525215 | MS.gene053596:CDS |
GAAATTTCAGACTGAGATTG+AGG | 0.497380 | 4.4:-21524179 | MS.gene053596:CDS |
GGAATGGGAACTCTACAAAT+GGG | 0.498031 | 4.4:-21527148 | MS.gene053596:CDS |
TATCTCTGCGTATAAGCTCC+TGG | 0.499342 | 4.4:+21527507 | None:intergenic |
TTATCTTCAGGCTGATAGCT+TGG | 0.499596 | 4.4:-21524364 | MS.gene053596:intron |
GATATCGTCATCATCACAAA+TGG | 0.501231 | 4.4:+21526403 | None:intergenic |
TTATAGCGATCAGTGGAAGA+TGG | 0.504808 | 4.4:+21527832 | None:intergenic |
ACGTGTTATGTTGAAGCTCC+AGG | 0.512753 | 4.4:-21527525 | MS.gene053596:CDS |
AGTGATATTTGATAAGATAG+TGG | 0.516177 | 4.4:+21524654 | None:intergenic |
TATAAGACAACTTACAACAT+TGG | 0.520923 | 4.4:+21526358 | None:intergenic |
TTCCACTGATCGCTATAAAA+GGG | 0.522326 | 4.4:-21527827 | MS.gene053596:CDS |
TTGAGCCGCTGTTGAGAAAT+GGG | 0.523015 | 4.4:+21527855 | None:intergenic |
GTGATATTTGATAAGATAGT+GGG | 0.524228 | 4.4:+21524655 | None:intergenic |
ACTGGAAGCTGGTTTGCCTG+AGG | 0.526090 | 4.4:-21526699 | MS.gene053596:CDS |
AACCAATTGGTGTTTGTGCT+GGG | 0.527195 | 4.4:-21527075 | MS.gene053596:CDS |
GTTGAATTGCAGGCAAAGCA+GGG | 0.528548 | 4.4:-21523243 | MS.gene053596:intron |
GTAGCATCAACATTTGCGTC+TGG | 0.531607 | 4.4:+21525930 | None:intergenic |
GCTCAAGGAGATGTGTTTCG+TGG | 0.534549 | 4.4:-21527304 | MS.gene053596:CDS |
TCGTGGGAGGTTCACAAGCA+TGG | 0.539389 | 4.4:-21525836 | MS.gene053596:intron |
GATGCTTGCAGAATTGGCAC+TGG | 0.542376 | 4.4:-21526717 | MS.gene053596:CDS |
GCTTGATGGAAGAAATATAG+TGG | 0.542955 | 4.4:-21525169 | MS.gene053596:intron |
CAGTGGAAGGATTCAGTTGG+TGG | 0.545276 | 4.4:-21523184 | MS.gene053596:CDS |
GGTGGAACATGCTTGTGGAA+TGG | 0.548358 | 4.4:-21527164 | MS.gene053596:CDS |
TTCGCAAGTTCCATTGACTA+CGG | 0.550198 | 4.4:-21527627 | MS.gene053596:CDS |
CAGTGTCTTTCCTTGTTCGG+TGG | 0.551950 | 4.4:+21527333 | None:intergenic |
CTAAGAAGGCATTTCCGTCA+TGG | 0.551971 | 4.4:-21527574 | MS.gene053596:CDS |
ACTGGACCAAGATCTGCATC+AGG | 0.552636 | 4.4:+21525379 | None:intergenic |
AACAATAACTCAGCAGTGGA+AGG | 0.553106 | 4.4:-21523197 | MS.gene053596:CDS |
GCTGGCGATCTCAATTTCTA+CGG | 0.557024 | 4.4:-21523887 | MS.gene053596:intron |
CTTAATATAACCACCGAACA+AGG | 0.558754 | 4.4:-21527343 | MS.gene053596:CDS |
AAGGGTTCCCAATCTTATTG+GGG | 0.562322 | 4.4:-21527809 | MS.gene053596:CDS |
TTTCCCGTGGCTGTTACTTG+TGG | 0.569235 | 4.4:-21527010 | MS.gene053596:CDS |
ATCATTGCGGGAAAGTTGAA+AGG | 0.571825 | 4.4:+21527046 | None:intergenic |
ACAACATTTAAGACACCCTC+AGG | 0.576285 | 4.4:+21526683 | None:intergenic |
TTTCTCATTTACTGGCAACA+AGG | 0.578740 | 4.4:-21523918 | MS.gene053596:CDS |
TCTTAAAGTAAACGCTGGAA+CGG | 0.592374 | 4.4:-21525404 | MS.gene053596:CDS |
TACAGCGTCAGAGAACCAAT+TGG | 0.593935 | 4.4:-21527088 | MS.gene053596:CDS |
TTCAGACTGAGATTGAGGCT+GGG | 0.595013 | 4.4:-21524174 | MS.gene053596:CDS |
TGCCGACATGGAGTGCTACA+AGG | 0.595715 | 4.4:-21524632 | MS.gene053596:intron |
ATCAAATATCACTGCCGACA+TGG | 0.599985 | 4.4:-21524644 | MS.gene053596:CDS |
TTGCCACAAGTAACAGCCAC+GGG | 0.603658 | 4.4:+21527007 | None:intergenic |
ACTGGAGTGTTACGCCATGA+CGG | 0.604165 | 4.4:+21527560 | None:intergenic |
GTGCATGACAAATAGGTCCC+AGG | 0.604335 | 4.4:-21524703 | MS.gene053596:intron |
TTCCCGCAATGATTCCATTG+TGG | 0.604636 | 4.4:-21527036 | MS.gene053596:CDS |
TATGTTTCAAATGTTTCACA+TGG | 0.608715 | 4.4:-21527121 | MS.gene053596:CDS |
CAGCAGTGGAAGGATTCAGT+TGG | 0.610522 | 4.4:-21523187 | MS.gene053596:CDS |
CCTCCATGAAAAGAAGAACT+GGG | 0.614002 | 4.4:+21524483 | None:intergenic |
AATTGCCAGATTCATATCCT+GGG | 0.614209 | 4.4:+21524686 | None:intergenic |
TTGGTGTGCAGTCTAATATG+GGG | 0.615382 | 4.4:-21525977 | MS.gene053596:intron |
TCAAAACAATAACTCAGCAG+TGG | 0.623442 | 4.4:-21523201 | MS.gene053596:CDS |
AAACCATCAGAGAAAGACCC+AGG | 0.627538 | 4.4:-21526971 | MS.gene053596:intron |
TTGAATTGCAGGCAAAGCAG+GGG | 0.628248 | 4.4:-21523242 | MS.gene053596:intron |
AAGACACTGAAGGATGCTCA+AGG | 0.637657 | 4.4:-21527319 | MS.gene053596:CDS |
GTTCAATCTGGGGTCGACAG+TGG | 0.639096 | 4.4:-21525204 | MS.gene053596:CDS |
AAAGCTCTTAAAGTAAACGC+TGG | 0.643147 | 4.4:-21525409 | MS.gene053596:CDS |
CATCCACAATGGAATCATTG+CGG | 0.648293 | 4.4:+21527033 | None:intergenic |
GCCACGGGAAACATCCACAA+TGG | 0.653277 | 4.4:+21527022 | None:intergenic |
AGGGTTCCCAATCTTATTGG+GGG | 0.654274 | 4.4:-21527808 | MS.gene053596:CDS |
TCCATTGTGGATGTTTCCCG+TGG | 0.654647 | 4.4:-21527023 | MS.gene053596:CDS |
GAATGGGAACTCTACAAATG+GGG | 0.655252 | 4.4:-21527147 | MS.gene053596:CDS |
GTTCCGAAAGCAGAGATCTG+AGG | 0.658576 | 4.4:+21527880 | None:intergenic |
TGGTGGTAGCAAGATTAACA+TGG | 0.672084 | 4.4:-21523167 | MS.gene053596:CDS |
TACCTTGTAGCACTCCATGT+CGG | 0.672475 | 4.4:+21524630 | None:intergenic |
CGAACAAGGAAAGACACTGA+AGG | 0.677513 | 4.4:-21527329 | MS.gene053596:CDS |
ATTGCCACAAGTAACAGCCA+CGG | 0.678517 | 4.4:+21527006 | None:intergenic |
TGATATTTGATAAGATAGTG+GGG | 0.681135 | 4.4:+21524656 | None:intergenic |
AGCCGCTGTTGAGAAATGGG+AGG | 0.683940 | 4.4:+21527858 | None:intergenic |
TGGTGTGCAGTCTAATATGG+GGG | 0.686626 | 4.4:-21525976 | MS.gene053596:intron |
AACCTCCCATTTCTCAACAG+CGG | 0.687198 | 4.4:-21527860 | MS.gene053596:CDS |
AATGGGAACTCTACAAATGG+GGG | 0.689460 | 4.4:-21527146 | MS.gene053596:CDS |
GAGGTGGTGGAACATGCTTG+TGG | 0.694713 | 4.4:-21527169 | MS.gene053596:CDS |
GCACAGATTAGTTCAATCTG+GGG | 0.697298 | 4.4:-21525214 | MS.gene053596:CDS |
GGAGCTTCAACATAACACGT+TGG | 0.699352 | 4.4:+21527528 | None:intergenic |
TCGCAGCTTTCTATTCAACG+AGG | 0.767158 | 4.4:-21528017 | MS.gene053596:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATTTGTTTAAATACAT+TGG | - | chr4.4:21527338-21527357 | MS.gene053596:CDS | 10.0% |
!!! | TTTTAATTTATATCATTTAG+AGG | - | chr4.4:21523973-21523992 | MS.gene053596:intron | 10.0% |
!! | AAAACAAAAACTGTAAATTA+AGG | + | chr4.4:21523445-21523464 | None:intergenic | 15.0% |
!! | AAACAAAAACTGTAAATTAA+GGG | + | chr4.4:21523444-21523463 | None:intergenic | 15.0% |
!! | AAAGTAAAATAAACAATAGT+AGG | - | chr4.4:21526291-21526310 | MS.gene053596:intron | 15.0% |
!! | ACAATAATCTATCATTATAT+GGG | + | chr4.4:21526382-21526401 | None:intergenic | 15.0% |
!! | ATACTAAAAATACAACATAA+AGG | + | chr4.4:21524997-21525016 | None:intergenic | 15.0% |
!! | TAATAAATCTAGATCAATTT+CGG | + | chr4.4:21525452-21525471 | None:intergenic | 15.0% |
!! | TACTAAAAATACAACATAAA+GGG | + | chr4.4:21524996-21525015 | None:intergenic | 15.0% |
!!! | TCATTCAAAAATTATTTCTA+CGG | - | chr4.4:21525841-21525860 | MS.gene053596:CDS | 15.0% |
!!! | TTAACATTATAATGGAAAAA+GGG | - | chr4.4:21524268-21524287 | MS.gene053596:intron | 15.0% |
!!! | TTTAACATTATAATGGAAAA+AGG | - | chr4.4:21524267-21524286 | MS.gene053596:intron | 15.0% |
!!! | TTTTATGATAATTCCAATAT+TGG | - | chr4.4:21525519-21525538 | MS.gene053596:intron | 15.0% |
!! | AATAAACAATAGTAGGAAAT+AGG | - | chr4.4:21526298-21526317 | MS.gene053596:intron | 20.0% |
!! | AGCATAGTTTAACATTATAA+TGG | - | chr4.4:21524260-21524279 | MS.gene053596:intron | 20.0% |
!! | ATATATAGCTGTTTAACATA+AGG | + | chr4.4:21526885-21526904 | None:intergenic | 20.0% |
!! | ATGTTTCTTAAAATTCTTAC+CGG | - | chr4.4:21525902-21525921 | MS.gene053596:CDS | 20.0% |
!! | CACAATAATCTATCATTATA+TGG | + | chr4.4:21526383-21526402 | None:intergenic | 20.0% |
!! | CTTAATATAAAAAGAGATGA+TGG | + | chr4.4:21524522-21524541 | None:intergenic | 20.0% |
!! | TAATTTATATCATTTAGAGG+TGG | - | chr4.4:21523976-21523995 | MS.gene053596:intron | 20.0% |
!! | TGATCTAGATTTATTAAATG+TGG | - | chr4.4:21525456-21525475 | MS.gene053596:intron | 20.0% |
!! | TTAGAAAGATATATAGAAGA+GGG | - | chr4.4:21524931-21524950 | MS.gene053596:intron | 20.0% |
!! | TTGTTTAAATACATTGGAAA+GGG | - | chr4.4:21527344-21527363 | MS.gene053596:CDS | 20.0% |
!! | TTTCATTAAGTATATGCATT+AGG | - | chr4.4:21527066-21527085 | MS.gene053596:CDS | 20.0% |
!! | TTTGTTTAAATACATTGGAA+AGG | - | chr4.4:21527343-21527362 | MS.gene053596:CDS | 20.0% |
!!! | AGAATAATATTTGTTTTCAC+CGG | - | chr4.4:21526723-21526742 | MS.gene053596:CDS | 20.0% |
!!! | ATAGTTATGCTCATAATTTT+TGG | - | chr4.4:21523931-21523950 | MS.gene053596:CDS | 20.0% |
!!! | ATTATGTTTTGTTTTTCTCA+CGG | - | chr4.4:21524695-21524714 | MS.gene053596:intron | 20.0% |
!!! | ATTTTCTGCATAATCATATA+GGG | - | chr4.4:21525490-21525509 | MS.gene053596:intron | 20.0% |
!!! | TAATCAAAATCAATTTTCCA+AGG | + | chr4.4:21525667-21525686 | None:intergenic | 20.0% |
!!! | TACAGCAAAATTTGTTTAAA+AGG | + | chr4.4:21524335-21524354 | None:intergenic | 20.0% |
!!! | TCTATTTCAACTTTGTTTTT+AGG | - | chr4.4:21523784-21523803 | MS.gene053596:intron | 20.0% |
!!! | TTGTTTTTTTTTTAAACGGA+AGG | + | chr4.4:21525564-21525583 | None:intergenic | 20.0% |
!!! | TTTACTGATTATACCAATAT+TGG | + | chr4.4:21525535-21525554 | None:intergenic | 20.0% |
!!! | TTTATTTTATCTTATCCTGT+CGG | + | chr4.4:21526247-21526266 | None:intergenic | 20.0% |
!!! | TTTTAACATTAAAAGAGTGT+GGG | + | chr4.4:21527665-21527684 | None:intergenic | 20.0% |
!!! | TTTTTAACATTAAAAGAGTG+TGG | + | chr4.4:21527666-21527685 | None:intergenic | 20.0% |
!!! | TTTTTCTTATGATATACTGT+AGG | - | chr4.4:21527874-21527893 | MS.gene053596:CDS | 20.0% |
! | AAATGTGAAAGTTGTTCAAA+GGG | - | chr4.4:21524633-21524652 | MS.gene053596:CDS | 25.0% |
! | AACATGTAATGATATGAAGT+TGG | - | chr4.4:21525147-21525166 | MS.gene053596:intron | 25.0% |
! | AATACAATGAAAACACCAAA+TGG | + | chr4.4:21524606-21524625 | None:intergenic | 25.0% |
! | AATCATATTGCATTATGACA+TGG | - | chr4.4:21527107-21527126 | MS.gene053596:CDS | 25.0% |
! | ACAAGTATTTATCAAACATG+CGG | - | chr4.4:21526847-21526866 | MS.gene053596:intron | 25.0% |
! | ACTTCTATATTTACTTCTTC+TGG | - | chr4.4:21526947-21526966 | MS.gene053596:intron | 25.0% |
! | AGTGATATTTGATAAGATAG+TGG | + | chr4.4:21526510-21526529 | None:intergenic | 25.0% |
! | ATACAATAACTCAGTTGAAA+AGG | + | chr4.4:21526040-21526059 | None:intergenic | 25.0% |
! | ATCATTATATGGGAAAACAA+AGG | + | chr4.4:21526372-21526391 | None:intergenic | 25.0% |
! | ATGTCATAATGCAATATGAT+TGG | + | chr4.4:21527108-21527127 | None:intergenic | 25.0% |
! | CAGATTGAGAAAATAATACA+AGG | + | chr4.4:21524239-21524258 | None:intergenic | 25.0% |
! | CTATCTAATATTTGTCTGAT+TGG | - | chr4.4:21523484-21523503 | MS.gene053596:intron | 25.0% |
! | GATAAGCAATCCTTAAAATT+GGG | + | chr4.4:21526429-21526448 | None:intergenic | 25.0% |
! | GTGATATTTGATAAGATAGT+GGG | + | chr4.4:21526509-21526528 | None:intergenic | 25.0% |
! | GTTAGAAAGATATATAGAAG+AGG | - | chr4.4:21524930-21524949 | MS.gene053596:intron | 25.0% |
! | GTTGGCCAATTAATAAAATT+TGG | - | chr4.4:21525165-21525184 | MS.gene053596:intron | 25.0% |
! | TAAAAATACAACATAAAGGG+AGG | + | chr4.4:21524993-21525012 | None:intergenic | 25.0% |
! | TAAATGTGAAAGTTGTTCAA+AGG | - | chr4.4:21524632-21524651 | MS.gene053596:intron | 25.0% |
! | TAAGAAAAATGAATCCACAA+TGG | + | chr4.4:21527863-21527882 | None:intergenic | 25.0% |
! | TACAATAACTCAGTTGAAAA+GGG | + | chr4.4:21526039-21526058 | None:intergenic | 25.0% |
! | TATAAGACAACTTACAACAT+TGG | + | chr4.4:21524806-21524825 | None:intergenic | 25.0% |
! | TATGTTTCAAATGTTTCACA+TGG | - | chr4.4:21524040-21524059 | MS.gene053596:intron | 25.0% |
! | TGATAAGCAATCCTTAAAAT+TGG | + | chr4.4:21526430-21526449 | None:intergenic | 25.0% |
! | TGATATTTGATAAGATAGTG+GGG | + | chr4.4:21526508-21526527 | None:intergenic | 25.0% |
! | TGTTTAAATACATTGGAAAG+GGG | - | chr4.4:21527345-21527364 | MS.gene053596:CDS | 25.0% |
!! | ACAATACATTATGCTATTTG+TGG | + | chr4.4:21527148-21527167 | None:intergenic | 25.0% |
!! | AGTGATAATGATACTCATTA+TGG | - | chr4.4:21527170-21527189 | MS.gene053596:CDS | 25.0% |
!! | AGTTATTGATAGTTGATTAG+TGG | - | chr4.4:21527706-21527725 | MS.gene053596:intron | 25.0% |
!! | CATTTTCTGCATAATCATAT+AGG | - | chr4.4:21525489-21525508 | MS.gene053596:intron | 25.0% |
!! | CTTGTATTATTTTCTCAATC+TGG | - | chr4.4:21524237-21524256 | MS.gene053596:intron | 25.0% |
!! | GCACACCAAATTTTATTAAT+TGG | + | chr4.4:21525173-21525192 | None:intergenic | 25.0% |
!! | GTTATTGATAGTTGATTAGT+GGG | - | chr4.4:21527707-21527726 | MS.gene053596:intron | 25.0% |
!! | TGTGTATAAATTGATTCACT+AGG | - | chr4.4:21526109-21526128 | MS.gene053596:CDS | 25.0% |
!!! | AAACAAATTTTGCTGTAGTT+GGG | - | chr4.4:21524338-21524357 | MS.gene053596:CDS | 25.0% |
!!! | TAAACAAATTTTGCTGTAGT+TGG | - | chr4.4:21524337-21524356 | MS.gene053596:CDS | 25.0% |
!!! | TCTGTTTTGTTTTTATCTTC+AGG | - | chr4.4:21526785-21526804 | MS.gene053596:intron | 25.0% |
!!! | TTATATTTGTTGTTTGTTCC+AGG | - | chr4.4:21524412-21524431 | MS.gene053596:intron | 25.0% |
!!! | TTTTTTTAATCTTTTGGCCT+TGG | - | chr4.4:21525647-21525666 | MS.gene053596:intron | 25.0% |
AAACCATGTATCTAATGCAT+TGG | + | chr4.4:21526180-21526199 | None:intergenic | 30.0% | |
AACCATGTATCTAATGCATT+GGG | + | chr4.4:21526179-21526198 | None:intergenic | 30.0% | |
AATCTTTACTACTTCTTGGA+AGG | - | chr4.4:21527016-21527035 | MS.gene053596:CDS | 30.0% | |
AGGGAAAAAAAAACACTTAC+AGG | + | chr4.4:21523425-21523444 | None:intergenic | 30.0% | |
ATCAAAGCCATATCATTTGT+TGG | - | chr4.4:21524778-21524797 | MS.gene053596:intron | 30.0% | |
ATGATACTCATTATGGATCT+TGG | - | chr4.4:21527177-21527196 | MS.gene053596:intron | 30.0% | |
CAAATTGCTCCAAGTAAAAA+AGG | + | chr4.4:21525406-21525425 | None:intergenic | 30.0% | |
CACTAATTAAATGTGCTCAT+GGG | - | chr4.4:21524572-21524591 | MS.gene053596:intron | 30.0% | |
CAGTTGAAAAGGGAAATTAA+GGG | + | chr4.4:21526029-21526048 | None:intergenic | 30.0% | |
CGGTTGTAAAATGATCATTA+AGG | + | chr4.4:21527394-21527413 | None:intergenic | 30.0% | |
GAAGTCCCTATTTGTATTAA+AGG | - | chr4.4:21525027-21525046 | MS.gene053596:intron | 30.0% | |
GATGCATAACTTTATTCTAC+AGG | - | chr4.4:21526325-21526344 | MS.gene053596:intron | 30.0% | |
GATTTGAATTGTTGAATTGC+AGG | - | chr4.4:21527908-21527927 | MS.gene053596:intron | 30.0% | |
GGATTGATATCCTTGATTAT+TGG | - | chr4.4:21524716-21524735 | MS.gene053596:intron | 30.0% | |
GGGAAAAAAAAACACTTACA+GGG | + | chr4.4:21523424-21523443 | None:intergenic | 30.0% | |
GGTAAATCTTTACTACTTCT+TGG | - | chr4.4:21527012-21527031 | MS.gene053596:CDS | 30.0% | |
GTTTAAATACATTGGAAAGG+GGG | - | chr4.4:21527346-21527365 | MS.gene053596:CDS | 30.0% | |
TAAAATCGATCATGCTAAAC+AGG | - | chr4.4:21526268-21526287 | MS.gene053596:intron | 30.0% | |
TAAAATTGGGCAGAAGAAAT+GGG | + | chr4.4:21526416-21526435 | None:intergenic | 30.0% | |
TAATCAAAGGAGTGAAAACA+AGG | + | chr4.4:21526219-21526238 | None:intergenic | 30.0% | |
TAGTGAGTATCAAAAGAAAC+AGG | + | chr4.4:21524557-21524576 | None:intergenic | 30.0% | |
TCACTAATTAAATGTGCTCA+TGG | - | chr4.4:21524571-21524590 | MS.gene053596:intron | 30.0% | |
TCAGTTGAAAAGGGAAATTA+AGG | + | chr4.4:21526030-21526049 | None:intergenic | 30.0% | |
TCCAGCCTTTAATACAAATA+GGG | + | chr4.4:21525035-21525054 | None:intergenic | 30.0% | |
TCTAACTAAGCACATTCAAA+CGG | + | chr4.4:21524916-21524935 | None:intergenic | 30.0% | |
TTAAAATTGGGCAGAAGAAA+TGG | + | chr4.4:21526417-21526436 | None:intergenic | 30.0% | |
TTACTCTTATCATTTCCAAC+AGG | - | chr4.4:21526912-21526931 | MS.gene053596:intron | 30.0% | |
TTCCAGCCTTTAATACAAAT+AGG | + | chr4.4:21525036-21525055 | None:intergenic | 30.0% | |
TTGCCAGTAAATGAGAAAAA+CGG | + | chr4.4:21527241-21527260 | None:intergenic | 30.0% | |
TTTAAATACATTGGAAAGGG+GGG | - | chr4.4:21527347-21527366 | MS.gene053596:CDS | 30.0% | |
TTTATATCATTTAGAGGTGG+TGG | - | chr4.4:21523979-21523998 | MS.gene053596:intron | 30.0% | |
! | AATGATCATTTTACAACCGT+CGG | - | chr4.4:21527395-21527414 | MS.gene053596:intron | 30.0% |
! | ACATTATAATGGAAAAAGGG+AGG | - | chr4.4:21524271-21524290 | MS.gene053596:intron | 30.0% |
! | ATTTCTTCTGCCCAATTTTA+AGG | - | chr4.4:21526416-21526435 | MS.gene053596:CDS | 30.0% |
! | CATTATAATGGAAAAAGGGA+GGG | - | chr4.4:21524272-21524291 | MS.gene053596:intron | 30.0% |
! | TATGAATCTGGCAATTTTGT+TGG | - | chr4.4:21526482-21526501 | MS.gene053596:intron | 30.0% |
!! | CTCTAACATCGTTTTTCATT+CGG | - | chr4.4:21524296-21524315 | MS.gene053596:intron | 30.0% |
!! | TTCTGACAAGATTGCTTTTA+AGG | + | chr4.4:21524877-21524896 | None:intergenic | 30.0% |
!!! | CCATTTTTGGGTTCTTAAAT+GGG | + | chr4.4:21527834-21527853 | None:intergenic | 30.0% |
!!! | GTTTTTGTTGATGATGCTTA+TGG | + | chr4.4:21526829-21526848 | None:intergenic | 30.0% |
!!! | TCCATTTTTGGGTTCTTAAA+TGG | + | chr4.4:21527835-21527854 | None:intergenic | 30.0% |
AAAAATGGATGTCTCCATTG+TGG | - | chr4.4:21527846-21527865 | MS.gene053596:CDS | 35.0% | |
AAAAGGGTTCCCAATCTTAT+TGG | - | chr4.4:21523350-21523369 | MS.gene053596:intron | 35.0% | |
AAAATTGGGCAGAAGAAATG+GGG | + | chr4.4:21526415-21526434 | None:intergenic | 35.0% | |
AAAGCTCTTAAAGTAAACGC+TGG | - | chr4.4:21525752-21525771 | MS.gene053596:intron | 35.0% | |
AAAGGGTTCCCAATCTTATT+GGG | - | chr4.4:21523351-21523370 | MS.gene053596:intron | 35.0% | |
AAATTGCCAGATTCATATCC+TGG | + | chr4.4:21526479-21526498 | None:intergenic | 35.0% | |
AACACAGAAATCGTGGTAAA+CGG | + | chr4.4:21525381-21525400 | None:intergenic | 35.0% | |
AATTGCCAGATTCATATCCT+GGG | + | chr4.4:21526478-21526497 | None:intergenic | 35.0% | |
ACATCAACTCTCTATTCTGA+AGG | + | chr4.4:21526601-21526620 | None:intergenic | 35.0% | |
ACCATGTATCTAATGCATTG+GGG | + | chr4.4:21526178-21526197 | None:intergenic | 35.0% | |
ACTTCTTGGAAGGACATTAA+TGG | - | chr4.4:21527026-21527045 | MS.gene053596:CDS | 35.0% | |
AGAGTGATTTCTCCAAAATC+TGG | - | chr4.4:21527298-21527317 | MS.gene053596:intron | 35.0% | |
ATTGGAGCCAACAAATGATA+TGG | + | chr4.4:21524788-21524807 | None:intergenic | 35.0% | |
ATTTCCAACAGGTATGGAAA+TGG | - | chr4.4:21526923-21526942 | MS.gene053596:intron | 35.0% | |
CACTTTCACAATAAGCATGA+CGG | + | chr4.4:21523752-21523771 | None:intergenic | 35.0% | |
CCCATTTAAGAACCCAAAAA+TGG | - | chr4.4:21527831-21527850 | MS.gene053596:CDS | 35.0% | |
CTAGAGAAAATACCTTGTGA+TGG | - | chr4.4:21525592-21525611 | MS.gene053596:intron | 35.0% | |
CTCACACAAAGTTCGTAAAT+AGG | + | chr4.4:21527734-21527753 | None:intergenic | 35.0% | |
CTTAATATAACCACCGAACA+AGG | - | chr4.4:21523818-21523837 | MS.gene053596:intron | 35.0% | |
CTTACCAATCTCAAATCTCA+AGG | - | chr4.4:21526558-21526577 | MS.gene053596:intron | 35.0% | |
CTTATCATTTCCAACAGGTA+TGG | - | chr4.4:21526917-21526936 | MS.gene053596:intron | 35.0% | |
GAAATTTCAGACTGAGATTG+AGG | - | chr4.4:21526982-21527001 | MS.gene053596:CDS | 35.0% | |
GATATCGTCATCATCACAAA+TGG | + | chr4.4:21524761-21524780 | None:intergenic | 35.0% | |
GCTTGATGGAAGAAATATAG+TGG | - | chr4.4:21525992-21526011 | MS.gene053596:intron | 35.0% | |
GGTGTCTTAAATGTTGTTCA+TGG | - | chr4.4:21524484-21524503 | MS.gene053596:CDS | 35.0% | |
GTAAATGAGAAAAACGGCAA+AGG | + | chr4.4:21527235-21527254 | None:intergenic | 35.0% | |
GTCTTTAACATTACACACAC+AGG | - | chr4.4:21526642-21526661 | MS.gene053596:intron | 35.0% | |
TAGTGGTAAGTGTTTGACTA+AGG | + | chr4.4:21527442-21527461 | None:intergenic | 35.0% | |
TCAAAACAATAACTCAGCAG+TGG | - | chr4.4:21527960-21527979 | MS.gene053596:intron | 35.0% | |
TCCCTATTTGTATTAAAGGC+TGG | - | chr4.4:21525031-21525050 | MS.gene053596:intron | 35.0% | |
TCTTAAAGTAAACGCTGGAA+CGG | - | chr4.4:21525757-21525776 | MS.gene053596:intron | 35.0% | |
TTAAGACCCCCAACTTTAAA+CGG | - | chr4.4:21527637-21527656 | MS.gene053596:CDS | 35.0% | |
TTCATACGTGCATGACAAAT+AGG | - | chr4.4:21526451-21526470 | MS.gene053596:intron | 35.0% | |
TTCCACTGATCGCTATAAAA+GGG | - | chr4.4:21523334-21523353 | MS.gene053596:intron | 35.0% | |
TTCTATGATGCTTGCAGAAT+TGG | - | chr4.4:21524438-21524457 | MS.gene053596:intron | 35.0% | |
TTCTGCATAATCATATAGGG+TGG | - | chr4.4:21525493-21525512 | MS.gene053596:intron | 35.0% | |
TTTAACATTACACACACAGG+AGG | - | chr4.4:21526645-21526664 | MS.gene053596:intron | 35.0% | |
TTTACGCTAAACAACCAAGT+GGG | - | chr4.4:21524370-21524389 | MS.gene053596:intron | 35.0% | |
TTTCTCATTTACTGGCAACA+AGG | - | chr4.4:21527243-21527262 | MS.gene053596:intron | 35.0% | |
! | AAAAGAGATGATGGCATACA+TGG | + | chr4.4:21524513-21524532 | None:intergenic | 35.0% |
! | AAAGAGATGATGGCATACAT+GGG | + | chr4.4:21524512-21524531 | None:intergenic | 35.0% |
! | ACAATGGAGACATCCATTTT+TGG | + | chr4.4:21527847-21527866 | None:intergenic | 35.0% |
! | AGCGTTTACTTTAAGAGCTT+TGG | + | chr4.4:21525753-21525772 | None:intergenic | 35.0% |
! | CACTTACAGGGTTTAAAACA+TGG | + | chr4.4:21523412-21523431 | None:intergenic | 35.0% |
! | CATGACGATTGCATGATTTT+TGG | + | chr4.4:21525211-21525230 | None:intergenic | 35.0% |
! | GAAACCTTGAGATTTGAGAT+TGG | + | chr4.4:21526565-21526584 | None:intergenic | 35.0% |
! | TATCCTTGATTATTGGTGAC+AGG | - | chr4.4:21524723-21524742 | MS.gene053596:intron | 35.0% |
! | TGCACAGATTAGTTCAATCT+GGG | - | chr4.4:21525946-21525965 | MS.gene053596:CDS | 35.0% |
! | TTTGGTGTGCAGTCTAATAT+GGG | - | chr4.4:21525183-21525202 | MS.gene053596:CDS | 35.0% |
!! | ATTTGGTGTGCAGTCTAATA+TGG | - | chr4.4:21525182-21525201 | MS.gene053596:CDS | 35.0% |
!! | CAATGGAGACATCCATTTTT+GGG | + | chr4.4:21527846-21527865 | None:intergenic | 35.0% |
!! | TTCTTTAAGACCATCTCCAA+CGG | - | chr4.4:21527523-21527542 | MS.gene053596:CDS | 35.0% |
!!! | TGCTTTTAAGGTCACAAAAG+AGG | + | chr4.4:21524865-21524884 | None:intergenic | 35.0% |
!!! | TTGCCGTTTTTCTCATTTAC+TGG | - | chr4.4:21527235-21527254 | MS.gene053596:intron | 35.0% |
AAAAAGATTCTCCCCAATGG+GGG | + | chr4.4:21527588-21527607 | None:intergenic | 40.0% | |
AAACCTTCCCCCAATAAGAT+TGG | + | chr4.4:21523363-21523382 | None:intergenic | 40.0% | |
AAATTGGGCAGAAGAAATGG+GGG | + | chr4.4:21526414-21526433 | None:intergenic | 40.0% | |
AACAATAACTCAGCAGTGGA+AGG | - | chr4.4:21527964-21527983 | MS.gene053596:intron | 40.0% | |
AACCTTCCCCCAATAAGATT+GGG | + | chr4.4:21523362-21523381 | None:intergenic | 40.0% | |
AACTCATCATCCGTAGTCAA+TGG | + | chr4.4:21523547-21523566 | None:intergenic | 40.0% | |
AAGGGTTCCCAATCTTATTG+GGG | - | chr4.4:21523352-21523371 | MS.gene053596:intron | 40.0% | |
AATGGGAACTCTACAAATGG+GGG | - | chr4.4:21524015-21524034 | MS.gene053596:intron | 40.0% | |
ACACAAATGTCTGTCTCATC+CGG | + | chr4.4:21526745-21526764 | None:intergenic | 40.0% | |
ACCTCCATGAAAAGAAGAAC+TGG | + | chr4.4:21526682-21526701 | None:intergenic | 40.0% | |
ACGAACTTTGTGTGAGATCT+GGG | - | chr4.4:21527738-21527757 | MS.gene053596:intron | 40.0% | |
ATAGAAAGCCAACATCACCT+GGG | + | chr4.4:21524210-21524229 | None:intergenic | 40.0% | |
ATCAAATATCACTGCCGACA+TGG | - | chr4.4:21526517-21526536 | MS.gene053596:intron | 40.0% | |
ATCATTGCGGGAAAGTTGAA+AGG | + | chr4.4:21524118-21524137 | None:intergenic | 40.0% | |
ATCCACAATGGAATCATTGC+GGG | + | chr4.4:21524130-21524149 | None:intergenic | 40.0% | |
ATCCTCCACAATATTTGTGC+AGG | - | chr4.4:21525705-21525724 | MS.gene053596:intron | 40.0% | |
ATGTGTTTCGTGGTTTAGGT+TGG | - | chr4.4:21523867-21523886 | MS.gene053596:intron | 40.0% | |
ATTCAAGAGCAGCAGCTAAA+GGG | - | chr4.4:21525065-21525084 | MS.gene053596:intron | 40.0% | |
CATCCACAATGGAATCATTG+CGG | + | chr4.4:21524131-21524150 | None:intergenic | 40.0% | |
CATCCTGTCACCAATAATCA+AGG | + | chr4.4:21524729-21524748 | None:intergenic | 40.0% | |
CCTCCATGAAAAGAAGAACT+GGG | + | chr4.4:21526681-21526700 | None:intergenic | 40.0% | |
CTTCAGTGTCTTTCCTTGTT+CGG | + | chr4.4:21523834-21523853 | None:intergenic | 40.0% | |
CTTCCACTGATCGCTATAAA+AGG | - | chr4.4:21523333-21523352 | MS.gene053596:intron | 40.0% | |
CTTTACGCTAAACAACCAAG+TGG | - | chr4.4:21524369-21524388 | MS.gene053596:intron | 40.0% | |
GAAAAAGATTCTCCCCAATG+GGG | + | chr4.4:21527589-21527608 | None:intergenic | 40.0% | |
GAATGGGAACTCTACAAATG+GGG | - | chr4.4:21524014-21524033 | MS.gene053596:intron | 40.0% | |
GAGAAAATACCTTGTGATGG+AGG | - | chr4.4:21525595-21525614 | MS.gene053596:intron | 40.0% | |
GATGAGACAGACATTTGTGT+TGG | - | chr4.4:21526745-21526764 | MS.gene053596:intron | 40.0% | |
GGAAAAAGATTCTCCCCAAT+GGG | + | chr4.4:21527590-21527609 | None:intergenic | 40.0% | |
GGAATGGGAACTCTACAAAT+GGG | - | chr4.4:21524013-21524032 | MS.gene053596:intron | 40.0% | |
GGAGGGATTGAGTGTTTATT+AGG | - | chr4.4:21527763-21527782 | MS.gene053596:CDS | 40.0% | |
GTAAATGCTTTAGTTGCTGC+TGG | - | chr4.4:21525255-21525274 | MS.gene053596:intron | 40.0% | |
GTTTACCACGATTTCTGTGT+TGG | - | chr4.4:21525380-21525399 | MS.gene053596:CDS | 40.0% | |
TAAGACCCCCAACTTTAAAC+GGG | - | chr4.4:21527638-21527657 | MS.gene053596:CDS | 40.0% | |
TACGAACTTTGTGTGAGATC+TGG | - | chr4.4:21527737-21527756 | MS.gene053596:intron | 40.0% | |
TATTCAAGAGCAGCAGCTAA+AGG | - | chr4.4:21525064-21525083 | MS.gene053596:intron | 40.0% | |
TCCAAGATGTGTCAACTTAG+TGG | + | chr4.4:21527459-21527478 | None:intergenic | 40.0% | |
TCCTCCACAATATTTGTGCA+GGG | - | chr4.4:21525706-21525725 | MS.gene053596:intron | 40.0% | |
TGATCGATGATCGTGTATCT+GGG | + | chr4.4:21523210-21523229 | None:intergenic | 40.0% | |
TGGAAAAAGATTCTCCCCAA+TGG | + | chr4.4:21527591-21527610 | None:intergenic | 40.0% | |
TGGAATGGGAACTCTACAAA+TGG | - | chr4.4:21524012-21524031 | MS.gene053596:intron | 40.0% | |
TGGTGGTAGCAAGATTAACA+TGG | - | chr4.4:21527994-21528013 | MS.gene053596:intron | 40.0% | |
TTATAGCGATCAGTGGAAGA+TGG | + | chr4.4:21523332-21523351 | None:intergenic | 40.0% | |
TTATCTTCAGGCTGATAGCT+TGG | - | chr4.4:21526797-21526816 | MS.gene053596:intron | 40.0% | |
TTGGTGTGCAGTCTAATATG+GGG | - | chr4.4:21525184-21525203 | MS.gene053596:CDS | 40.0% | |
! | AACCAATTGGTGTTTGTGCT+GGG | - | chr4.4:21524086-21524105 | MS.gene053596:intron | 40.0% |
! | AACCCTTTTATAGCGATCAG+TGG | + | chr4.4:21523339-21523358 | None:intergenic | 40.0% |
! | ACAACATTTAAGACACCCTC+AGG | + | chr4.4:21524481-21524500 | None:intergenic | 40.0% |
! | ACAGGTTTGTTTACTCTCTC+TGG | - | chr4.4:21525814-21525833 | MS.gene053596:intron | 40.0% |
! | ACCACTAAGTTGACACATCT+TGG | - | chr4.4:21527455-21527474 | MS.gene053596:intron | 40.0% |
! | ATGGAGGTGTATGGATTCAT+TGG | - | chr4.4:21525611-21525630 | MS.gene053596:intron | 40.0% |
! | ATTGCAGACAAGCCAGATTT+TGG | + | chr4.4:21527313-21527332 | None:intergenic | 40.0% |
! | ATTGGGGAGAATCTTTTTCC+AGG | - | chr4.4:21527590-21527609 | MS.gene053596:CDS | 40.0% |
! | ATTTTACAACCGTCGGTGAA+GGG | - | chr4.4:21527402-21527421 | MS.gene053596:intron | 40.0% |
! | CAAACCTGTTTGCTGATAAC+TGG | + | chr4.4:21525803-21525822 | None:intergenic | 40.0% |
! | CACACACAGGAGGAAATTTT+TGG | - | chr4.4:21526655-21526674 | MS.gene053596:intron | 40.0% |
! | GCACAGATTAGTTCAATCTG+GGG | - | chr4.4:21525947-21525966 | MS.gene053596:CDS | 40.0% |
! | GTGCACAGATTAGTTCAATC+TGG | - | chr4.4:21525945-21525964 | MS.gene053596:CDS | 40.0% |
! | TTCGCAAGTTCCATTGACTA+CGG | - | chr4.4:21523534-21523553 | MS.gene053596:intron | 40.0% |
! | TTGGGGAGAATCTTTTTCCA+GGG | - | chr4.4:21527591-21527610 | MS.gene053596:CDS | 40.0% |
! | TTGTCTGATTGGCTGATCAT+AGG | - | chr4.4:21523495-21523514 | MS.gene053596:intron | 40.0% |
! | TTTAAGACCCGGTACCTATT+AGG | - | chr4.4:21527560-21527579 | MS.gene053596:CDS | 40.0% |
!! | AAAATTCTTACCGGCTTCAC+AGG | - | chr4.4:21525911-21525930 | MS.gene053596:CDS | 40.0% |
!! | AGTTCATTTTTCCTGCTCTC+AGG | - | chr4.4:21525108-21525127 | MS.gene053596:intron | 40.0% |
!! | CTCAGTACAGTTGTTTTCGT+GGG | - | chr4.4:21525309-21525328 | MS.gene053596:intron | 40.0% |
!! | GTTCATTTTTCCTGCTCTCA+GGG | - | chr4.4:21525109-21525128 | MS.gene053596:intron | 40.0% |
!! | TCTCAGTACAGTTGTTTTCG+TGG | - | chr4.4:21525308-21525327 | MS.gene053596:intron | 40.0% |
!! | TCTTTAAGACCATCTCCAAC+GGG | - | chr4.4:21527524-21527543 | MS.gene053596:CDS | 40.0% |
!!! | CTGTGTTGGCCTTTTTTACT+TGG | - | chr4.4:21525394-21525413 | MS.gene053596:CDS | 40.0% |
!!! | TCATGGGCACTTTTTCCATT+TGG | - | chr4.4:21524588-21524607 | MS.gene053596:intron | 40.0% |
AAACCATCAGAGAAAGACCC+AGG | - | chr4.4:21524190-21524209 | MS.gene053596:CDS | 45.0% | |
AAAGGCCAACACAGAAATCG+TGG | + | chr4.4:21525388-21525407 | None:intergenic | 45.0% | |
AAATGAGTGATGTGTACGCG+TGG | - | chr4.4:21527806-21527825 | MS.gene053596:CDS | 45.0% | |
AACCTCCCATTTCTCAACAG+CGG | - | chr4.4:21523301-21523320 | MS.gene053596:intron | 45.0% | |
AACGGCAAAGGAACTGGAAT+AGG | + | chr4.4:21527223-21527242 | None:intergenic | 45.0% | |
AAGACACTGAAGGATGCTCA+AGG | - | chr4.4:21523842-21523861 | MS.gene053596:intron | 45.0% | |
AATGAGTGATGTGTACGCGT+GGG | - | chr4.4:21527807-21527826 | MS.gene053596:CDS | 45.0% | |
AATTGGGCAGAAGAAATGGG+GGG | + | chr4.4:21526413-21526432 | None:intergenic | 45.0% | |
ACCTATTAGGTACCCCCATT+GGG | - | chr4.4:21527573-21527592 | MS.gene053596:CDS | 45.0% | |
ACGTGTTATGTTGAAGCTCC+AGG | - | chr4.4:21523636-21523655 | MS.gene053596:intron | 45.0% | |
ACTTTGTGTGAGATCTGGGT+TGG | - | chr4.4:21527742-21527761 | MS.gene053596:intron | 45.0% | |
AGGGTTCCCAATCTTATTGG+GGG | - | chr4.4:21523353-21523372 | MS.gene053596:intron | 45.0% | |
AGTTCAAATCCCTTCACCGA+CGG | + | chr4.4:21527414-21527433 | None:intergenic | 45.0% | |
ATCCATACACCTCCATCACA+AGG | + | chr4.4:21525607-21525626 | None:intergenic | 45.0% | |
ATCCCAGCACAAACACCAAT+TGG | + | chr4.4:21524091-21524110 | None:intergenic | 45.0% | |
ATGCCTCAGATCTCTGCTTT+CGG | - | chr4.4:21523278-21523297 | MS.gene053596:intron | 45.0% | |
ATTGCCACAAGTAACAGCCA+CGG | + | chr4.4:21524158-21524177 | None:intergenic | 45.0% | |
CCTGTCGGACACATAATCAA+AGG | + | chr4.4:21526232-21526251 | None:intergenic | 45.0% | |
CCTTTGATTATGTGTCCGAC+AGG | - | chr4.4:21526229-21526248 | MS.gene053596:intron | 45.0% | |
CGAACAAGGAAAGACACTGA+AGG | - | chr4.4:21523832-21523851 | MS.gene053596:intron | 45.0% | |
CTAAACAACCAAGTGGGATG+AGG | - | chr4.4:21524376-21524395 | MS.gene053596:intron | 45.0% | |
CTCATTATGGATCTTGGACC+AGG | - | chr4.4:21527183-21527202 | MS.gene053596:intron | 45.0% | |
GAGAAAAACGGCAAAGGAAC+TGG | + | chr4.4:21527229-21527248 | None:intergenic | 45.0% | |
GAGGGCAAGTGATTAACATG+CGG | - | chr4.4:21524949-21524968 | MS.gene053596:intron | 45.0% | |
GATAGAAAGCCAACATCACC+TGG | + | chr4.4:21524211-21524230 | None:intergenic | 45.0% | |
GCCCCAATGCATTAGATACA+TGG | - | chr4.4:21526174-21526193 | MS.gene053596:intron | 45.0% | |
GCTGGCGATCTCAATTTCTA+CGG | - | chr4.4:21527274-21527293 | MS.gene053596:intron | 45.0% | |
GGAAAACAAAGGCCTACTCA+AGG | + | chr4.4:21526361-21526380 | None:intergenic | 45.0% | |
GGAAATCAGTCGAAGCAGAA+TGG | + | chr4.4:21525360-21525379 | None:intergenic | 45.0% | |
GGAGATGTGTTTCGTGGTTT+AGG | - | chr4.4:21523863-21523882 | MS.gene053596:intron | 45.0% | |
GGAGCTTATACGCAGAGATA+TGG | - | chr4.4:21523657-21523676 | MS.gene053596:intron | 45.0% | |
GGAGCTTCAACATAACACGT+TGG | + | chr4.4:21523636-21523655 | None:intergenic | 45.0% | |
GTAGCATCAACATTTGCGTC+TGG | + | chr4.4:21525234-21525253 | None:intergenic | 45.0% | |
GTGATCGATGATCGTGTATC+TGG | + | chr4.4:21523211-21523230 | None:intergenic | 45.0% | |
GTGGAACATGCTTGTGGAAT+GGG | - | chr4.4:21523998-21524017 | MS.gene053596:intron | 45.0% | |
GTTGAATTGCAGGCAAAGCA+GGG | - | chr4.4:21527918-21527937 | MS.gene053596:intron | 45.0% | |
GTTGCCCTGCACAAATATTG+TGG | + | chr4.4:21525713-21525732 | None:intergenic | 45.0% | |
TAACCAATTTCCCTGAGAGC+AGG | + | chr4.4:21525122-21525141 | None:intergenic | 45.0% | |
TACAGCGTCAGAGAACCAAT+TGG | - | chr4.4:21524073-21524092 | MS.gene053596:intron | 45.0% | |
TACCTATTAGGTACCCCCAT+TGG | - | chr4.4:21527572-21527591 | MS.gene053596:CDS | 45.0% | |
TACCTTGTAGCACTCCATGT+CGG | + | chr4.4:21526534-21526553 | None:intergenic | 45.0% | |
TAGGAACATTGATGCCAACC+TGG | + | chr4.4:21527204-21527223 | None:intergenic | 45.0% | |
TAGGTCCCAGGATATGAATC+TGG | - | chr4.4:21526470-21526489 | MS.gene053596:intron | 45.0% | |
TATCTCTGCGTATAAGCTCC+TGG | + | chr4.4:21523657-21523676 | None:intergenic | 45.0% | |
TCGCAGCTTTCTATTCAACG+AGG | - | chr4.4:21523144-21523163 | MS.gene053596:CDS | 45.0% | |
TCTTCCATCAAGCAGTAGTC+TGG | + | chr4.4:21525985-21526004 | None:intergenic | 45.0% | |
TGCTGTATCTGCAGCTAAGA+AGG | - | chr4.4:21523573-21523592 | MS.gene053596:intron | 45.0% | |
TGGTCCAGTTATCAGCAAAC+AGG | - | chr4.4:21525796-21525815 | MS.gene053596:intron | 45.0% | |
TGGTGTGCAGTCTAATATGG+GGG | - | chr4.4:21525185-21525204 | MS.gene053596:CDS | 45.0% | |
TGTTGAATTGCAGGCAAAGC+AGG | - | chr4.4:21527917-21527936 | MS.gene053596:intron | 45.0% | |
TTATGGATCTTGGACCAGGT+TGG | - | chr4.4:21527187-21527206 | MS.gene053596:intron | 45.0% | |
TTCAGACTGAGATTGAGGCT+GGG | - | chr4.4:21526987-21527006 | MS.gene053596:CDS | 45.0% | |
TTCCCAATCTTATTGGGGGA+AGG | - | chr4.4:21523357-21523376 | MS.gene053596:intron | 45.0% | |
TTCCCGCAATGATTCCATTG+TGG | - | chr4.4:21524125-21524144 | MS.gene053596:intron | 45.0% | |
TTGAATTGCAGGCAAAGCAG+GGG | - | chr4.4:21527919-21527938 | MS.gene053596:intron | 45.0% | |
TTGAGCCGCTGTTGAGAAAT+GGG | + | chr4.4:21523309-21523328 | None:intergenic | 45.0% | |
TTTCAGACTGAGATTGAGGC+TGG | - | chr4.4:21526986-21527005 | MS.gene053596:CDS | 45.0% | |
TTTCCTGCTCTCAGGGAAAT+TGG | - | chr4.4:21525116-21525135 | MS.gene053596:intron | 45.0% | |
! | CATTTTACAACCGTCGGTGA+AGG | - | chr4.4:21527401-21527420 | MS.gene053596:intron | 45.0% |
! | CCCAGTTCTTCTTTTCATGG+AGG | - | chr4.4:21526678-21526697 | MS.gene053596:CDS | 45.0% |
! | GAACCAATTGGTGTTTGTGC+TGG | - | chr4.4:21524085-21524104 | MS.gene053596:intron | 45.0% |
! | GGTCTTGGACATTTAAGACC+CGG | - | chr4.4:21527549-21527568 | MS.gene053596:CDS | 45.0% |
! | TACCTTGTGATGGAGGTGTA+TGG | - | chr4.4:21525602-21525621 | MS.gene053596:intron | 45.0% |
! | TGGCCCAGTTCTTCTTTTCA+TGG | - | chr4.4:21526675-21526694 | MS.gene053596:CDS | 45.0% |
! | TGTGGGTCCCGTTTAAAGTT+GGG | + | chr4.4:21527648-21527667 | None:intergenic | 45.0% |
! | TTCCAGGGTCTTATAAGACC+CGG | - | chr4.4:21527606-21527625 | MS.gene053596:CDS | 45.0% |
!! | AGTACAGTTGTTTTCGTGGG+AGG | - | chr4.4:21525312-21525331 | MS.gene053596:intron | 45.0% |
!! | AGTGCCATTTCCATACCTGT+TGG | + | chr4.4:21526930-21526949 | None:intergenic | 45.0% |
!! | CTAAGAAGGCATTTCCGTCA+TGG | - | chr4.4:21523587-21523606 | MS.gene053596:intron | 45.0% |
!!! | GCTTTAGTTGCTGCTGGTTT+TGG | - | chr4.4:21525261-21525280 | MS.gene053596:intron | 45.0% |
!!! | TATTTTGTTTTTTTTTTAAA+CGG | + | chr4.4:21525568-21525587 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTAATCTTT+TGG | - | chr4.4:21525641-21525660 | MS.gene053596:intron | 5.0% |
ACGGAACCTGATGCAGATCT+TGG | - | chr4.4:21525776-21525795 | MS.gene053596:intron | 50.0% | |
ACTGGACCAAGATCTGCATC+AGG | + | chr4.4:21525785-21525804 | None:intergenic | 50.0% | |
CAGCAGTGGAAGGATTCAGT+TGG | - | chr4.4:21527974-21527993 | MS.gene053596:intron | 50.0% | |
CAGTGGAAGGATTCAGTTGG+TGG | - | chr4.4:21527977-21527996 | MS.gene053596:intron | 50.0% | |
CAGTGTCTTTCCTTGTTCGG+TGG | + | chr4.4:21523831-21523850 | None:intergenic | 50.0% | |
CCTATTAGGTACCCCCATTG+GGG | - | chr4.4:21527574-21527593 | MS.gene053596:CDS | 50.0% | |
GAGAAAGACCCAGGTGATGT+TGG | - | chr4.4:21524199-21524218 | MS.gene053596:CDS | 50.0% | |
GATGCTTGCAGAATTGGCAC+TGG | - | chr4.4:21524444-21524463 | MS.gene053596:intron | 50.0% | |
GCCCTGCACAAATATTGTGG+AGG | + | chr4.4:21525710-21525729 | None:intergenic | 50.0% | |
GCTCAAGGAGATGTGTTTCG+TGG | - | chr4.4:21523857-21523876 | MS.gene053596:intron | 50.0% | |
GGCTAGAACAGTCCTTGAGT+AGG | - | chr4.4:21526346-21526365 | MS.gene053596:intron | 50.0% | |
GGTGGAACATGCTTGTGGAA+TGG | - | chr4.4:21523997-21524016 | MS.gene053596:intron | 50.0% | |
GTGCATGACAAATAGGTCCC+AGG | - | chr4.4:21526458-21526477 | MS.gene053596:intron | 50.0% | |
GTTCCGAAAGCAGAGATCTG+AGG | + | chr4.4:21523284-21523303 | None:intergenic | 50.0% | |
GTTGAGCCGCTGTTGAGAAA+TGG | + | chr4.4:21523310-21523329 | None:intergenic | 50.0% | |
TAAGACCATCTCCAACGGGA+GGG | - | chr4.4:21527528-21527547 | MS.gene053596:CDS | 50.0% | |
TCACCTGGGTCTTTCTCTGA+TGG | + | chr4.4:21524196-21524215 | None:intergenic | 50.0% | |
TCCATTGTGGATGTTTCCCG+TGG | - | chr4.4:21524138-21524157 | MS.gene053596:intron | 50.0% | |
TTAAGACCATCTCCAACGGG+AGG | - | chr4.4:21527527-21527546 | MS.gene053596:CDS | 50.0% | |
TTGCCACAAGTAACAGCCAC+GGG | + | chr4.4:21524157-21524176 | None:intergenic | 50.0% | |
! | AAAGGGAAGCGTGTTCAGGT+AGG | - | chr4.4:21525082-21525101 | MS.gene053596:intron | 50.0% |
! | ACTGGAGTGTTACGCCATGA+CGG | + | chr4.4:21523604-21523623 | None:intergenic | 50.0% |
! | AGCTAAAGGGAAGCGTGTTC+AGG | - | chr4.4:21525078-21525097 | MS.gene053596:intron | 50.0% |
! | GTGGGTCCCGTTTAAAGTTG+GGG | + | chr4.4:21527647-21527666 | None:intergenic | 50.0% |
! | GTGTGGGTCCCGTTTAAAGT+TGG | + | chr4.4:21527649-21527668 | None:intergenic | 50.0% |
! | TCCAGGGTCTTATAAGACCC+GGG | - | chr4.4:21527607-21527626 | MS.gene053596:CDS | 50.0% |
! | TGGGTCCCGTTTAAAGTTGG+GGG | + | chr4.4:21527646-21527665 | None:intergenic | 50.0% |
! | TGTGTGAGATCTGGGTTGGA+GGG | - | chr4.4:21527746-21527765 | MS.gene053596:intron | 50.0% |
! | TTGTGTGAGATCTGGGTTGG+AGG | - | chr4.4:21527745-21527764 | MS.gene053596:intron | 50.0% |
! | TTTCCCGTGGCTGTTACTTG+TGG | - | chr4.4:21524151-21524170 | MS.gene053596:intron | 50.0% |
!! | CTTCTTCTGGTGTTGCTGCT+AGG | - | chr4.4:21526960-21526979 | MS.gene053596:intron | 50.0% |
!! | GCAAGCATCATAGAAGCACC+TGG | + | chr4.4:21524433-21524452 | None:intergenic | 50.0% |
!! | TGGGGGTACCTAATAGGTAC+CGG | + | chr4.4:21527571-21527590 | None:intergenic | 50.0% |
AATGTCCAAGACCCTCCCGT+TGG | + | chr4.4:21527542-21527561 | None:intergenic | 55.0% | |
AGCCGCTGTTGAGAAATGGG+AGG | + | chr4.4:21523306-21523325 | None:intergenic | 55.0% | |
CAACCAAGCCTCATCCCACT+TGG | + | chr4.4:21524387-21524406 | None:intergenic | 55.0% | |
CAACCAAGTGGGATGAGGCT+TGG | - | chr4.4:21524381-21524400 | MS.gene053596:intron | 55.0% | |
GCCACGGGAAACATCCACAA+TGG | + | chr4.4:21524142-21524161 | None:intergenic | 55.0% | |
GGGGGTCTTAAGTAAGACCC+CGG | + | chr4.4:21527628-21527647 | None:intergenic | 55.0% | |
GGGGTCTTAAGTAAGACCCC+GGG | + | chr4.4:21527627-21527646 | None:intergenic | 55.0% | |
GGTGCCAGACTACTGCTTGA+TGG | - | chr4.4:21525978-21525997 | MS.gene053596:intron | 55.0% | |
TCGTGGGAGGTTCACAAGCA+TGG | - | chr4.4:21525325-21525344 | MS.gene053596:intron | 55.0% | |
! | CCAGGGTCTTATAAGACCCG+GGG | - | chr4.4:21527608-21527627 | MS.gene053596:CDS | 55.0% |
! | GCAGAATTGGCACTGGAAGC+TGG | - | chr4.4:21524451-21524470 | MS.gene053596:intron | 55.0% |
! | GGCAACAAGGCGTCATTTGC+TGG | - | chr4.4:21527256-21527275 | MS.gene053596:intron | 55.0% |
! | GTTCAATCTGGGGTCGACAG+TGG | - | chr4.4:21525957-21525976 | MS.gene053596:CDS | 55.0% |
! | TGCCGACATGGAGTGCTACA+AGG | - | chr4.4:21526529-21526548 | MS.gene053596:intron | 55.0% |
!! | ACTGGAAGCTGGTTTGCCTG+AGG | - | chr4.4:21524462-21524481 | MS.gene053596:intron | 55.0% |
!! | CCCCAATGGGGGTACCTAAT+AGG | + | chr4.4:21527577-21527596 | None:intergenic | 55.0% |
!! | CTGGAAGCTGGTTTGCCTGA+GGG | - | chr4.4:21524463-21524482 | MS.gene053596:intron | 55.0% |
!! | CTTACCGGCTTCACAGGCAA+AGG | - | chr4.4:21525917-21525936 | MS.gene053596:CDS | 55.0% |
!! | GAGGTGGTGGAACATGCTTG+TGG | - | chr4.4:21523992-21524011 | MS.gene053596:intron | 55.0% |
!! | GGGGGTACCTAATAGGTACC+GGG | + | chr4.4:21527570-21527589 | None:intergenic | 55.0% |
!!! | CTGCTGGTTTTGGAGCTGCT+GGG | - | chr4.4:21525271-21525290 | MS.gene053596:intron | 55.0% |
!!! | GTTTTGGAGCTGCTGGGCAA+AGG | - | chr4.4:21525277-21525296 | MS.gene053596:intron | 55.0% |
ACACGTTGGCGCGTCGTAAC+TGG | + | chr4.4:21523622-21523641 | None:intergenic | 60.0% | |
CAAGACCCTCCCGTTGGAGA+TGG | + | chr4.4:21527536-21527555 | None:intergenic | 60.0% | |
CATCTCCAACGGGAGGGTCT+TGG | - | chr4.4:21527534-21527553 | MS.gene053596:CDS | 60.0% | |
CGCTCCTTTGCCTGTGAAGC+CGG | + | chr4.4:21525924-21525943 | None:intergenic | 60.0% | |
GACTGAGATTGAGGCTGGGC+AGG | - | chr4.4:21526991-21527010 | MS.gene053596:CDS | 60.0% | |
! | AGCTGCTGGGCAAAGGTGCA+TGG | - | chr4.4:21525284-21525303 | MS.gene053596:intron | 60.0% |
! | CCCCGGGTCTTATAAGACCC+TGG | + | chr4.4:21527611-21527630 | None:intergenic | 60.0% |
!!! | GCTGCTGGTTTTGGAGCTGC+TGG | - | chr4.4:21525270-21525289 | MS.gene053596:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 21523141 | 21528042 | 21523141 | ID=MS.gene053596 |
chr4.4 | mRNA | 21523141 | 21528042 | 21523141 | ID=MS.gene053596.t1;Parent=MS.gene053596 |
chr4.4 | exon | 21528018 | 21528042 | 21528018 | ID=MS.gene053596.t1.exon1;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21528018 | 21528042 | 21528018 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21527759 | 21527925 | 21527759 | ID=MS.gene053596.t1.exon2;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21527759 | 21527925 | 21527759 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21527505 | 21527666 | 21527505 | ID=MS.gene053596.t1.exon3;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21527505 | 21527666 | 21527505 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21527299 | 21527377 | 21527299 | ID=MS.gene053596.t1.exon4;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21527299 | 21527377 | 21527299 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21526972 | 21527190 | 21526972 | ID=MS.gene053596.t1.exon5;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21526972 | 21527190 | 21526972 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21526670 | 21526749 | 21526670 | ID=MS.gene053596.t1.exon6;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21526670 | 21526749 | 21526670 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21526373 | 21526438 | 21526373 | ID=MS.gene053596.t1.exon7;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21526373 | 21526438 | 21526373 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21526084 | 21526134 | 21526084 | ID=MS.gene053596.t1.exon8;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21526084 | 21526134 | 21526084 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21525837 | 21525988 | 21525837 | ID=MS.gene053596.t1.exon9;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21525837 | 21525988 | 21525837 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21525366 | 21525456 | 21525366 | ID=MS.gene053596.t1.exon10;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21525366 | 21525456 | 21525366 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21525170 | 21525250 | 21525170 | ID=MS.gene053596.t1.exon11;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21525170 | 21525250 | 21525170 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21524633 | 21524710 | 21524633 | ID=MS.gene053596.t1.exon12;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21524633 | 21524710 | 21524633 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21524484 | 21524519 | 21524484 | ID=MS.gene053596.t1.exon13;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21524484 | 21524519 | 21524484 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21524333 | 21524376 | 21524333 | ID=MS.gene053596.t1.exon14;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21524333 | 21524376 | 21524333 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21524171 | 21524249 | 21524171 | ID=MS.gene053596.t1.exon15;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21524171 | 21524249 | 21524171 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21523888 | 21523978 | 21523888 | ID=MS.gene053596.t1.exon16;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21523888 | 21523978 | 21523888 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
chr4.4 | exon | 21523141 | 21523253 | 21523141 | ID=MS.gene053596.t1.exon17;Parent=MS.gene053596.t1 |
chr4.4 | CDS | 21523141 | 21523253 | 21523141 | ID=cds.MS.gene053596.t1;Parent=MS.gene053596.t1 |
Gene Sequence |
Protein sequence |