Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63539.t1 | XP_024635317.1 | 95.3 | 448 | 20 | 1 | 1 | 448 | 1 | 447 | 2.60E-246 | 860.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63539.t1 | Q9Y7K5 | 29.0 | 383 | 245 | 10 | 66 | 444 | 66 | 425 | 3.3e-32 | 141.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63539.t1 | G7J0E2 | 95.3 | 448 | 20 | 1 | 1 | 448 | 1 | 447 | 1.9e-246 | 860.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene63539 | 0.854194 | 1.45E-61 | -1.69E-46 |
| MS.gene049378 | MS.gene63539 | 0.834864 | 2.34E-56 | -1.69E-46 |
| MS.gene049419 | MS.gene63539 | -0.864542 | 1.13E-64 | -1.69E-46 |
| MS.gene049669 | MS.gene63539 | 0.829905 | 3.96E-55 | -1.69E-46 |
| MS.gene050105 | MS.gene63539 | 0.89423 | 3.00E-75 | -1.69E-46 |
| MS.gene050312 | MS.gene63539 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene050508 | MS.gene63539 | 0.834374 | 3.11E-56 | -1.69E-46 |
| MS.gene050750 | MS.gene63539 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene63539 | 0.816788 | 4.62E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene63539 | 0.833854 | 4.20E-56 | -1.69E-46 |
| MS.gene051122 | MS.gene63539 | 0.864909 | 8.66E-65 | -1.69E-46 |
| MS.gene051368 | MS.gene63539 | 0.829944 | 3.88E-55 | -1.69E-46 |
| MS.gene051926 | MS.gene63539 | -0.818704 | 1.71E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene63539 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene052108 | MS.gene63539 | 0.817098 | 3.93E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene63539 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene63539 | 0.848349 | 6.49E-60 | -1.69E-46 |
| MS.gene052333 | MS.gene63539 | 0.826073 | 3.31E-54 | -1.69E-46 |
| MS.gene052389 | MS.gene63539 | 0.81088 | 9.25E-51 | -1.69E-46 |
| MS.gene052500 | MS.gene63539 | 0.810518 | 1.11E-50 | -1.69E-46 |
| MS.gene052502 | MS.gene63539 | 0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene63539 | 0.8141 | 1.83E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene63539 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene63539 | 0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene63539 | 0.816758 | 4.69E-52 | -1.69E-46 |
| MS.gene052824 | MS.gene63539 | 0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene052826 | MS.gene63539 | 0.809996 | 1.44E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene63539 | 0.863539 | 2.32E-64 | -1.69E-46 |
| MS.gene053006 | MS.gene63539 | 0.808783 | 2.61E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene63539 | 0.830324 | 3.13E-55 | -1.69E-46 |
| MS.gene053188 | MS.gene63539 | 0.812762 | 3.60E-51 | -1.69E-46 |
| MS.gene053216 | MS.gene63539 | 0.82949 | 5.00E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene63539 | 0.83504 | 2.11E-56 | -1.69E-46 |
| MS.gene05415 | MS.gene63539 | 0.810194 | 1.30E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene63539 | 0.808142 | 3.58E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene63539 | 0.873523 | 1.38E-67 | -1.69E-46 |
| MS.gene054537 | MS.gene63539 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene63539 | 0.806704 | 7.23E-50 | -1.69E-46 |
| MS.gene055063 | MS.gene63539 | -0.814848 | 1.25E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene63539 | 0.824451 | 8.02E-54 | -1.69E-46 |
| MS.gene055225 | MS.gene63539 | 0.839137 | 1.90E-57 | -1.69E-46 |
| MS.gene055230 | MS.gene63539 | 0.821477 | 3.96E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene63539 | 0.808254 | 3.39E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene63539 | 0.885801 | 5.94E-72 | -1.69E-46 |
| MS.gene055818 | MS.gene63539 | 0.812919 | 3.33E-51 | -1.69E-46 |
| MS.gene055841 | MS.gene63539 | 0.806231 | 9.10E-50 | -1.69E-46 |
| MS.gene056064 | MS.gene63539 | 0.829187 | 5.92E-55 | -1.69E-46 |
| MS.gene056506 | MS.gene63539 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene056779 | MS.gene63539 | 0.828053 | 1.11E-54 | -1.69E-46 |
| MS.gene057026 | MS.gene63539 | 0.841296 | 5.18E-58 | -1.69E-46 |
| MS.gene057155 | MS.gene63539 | 0.813409 | 2.60E-51 | -1.69E-46 |
| MS.gene057156 | MS.gene63539 | -0.848201 | 7.13E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene63539 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene63539 | 0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene63539 | 0.808783 | 2.61E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene63539 | -0.836106 | 1.14E-56 | -1.69E-46 |
| MS.gene058399 | MS.gene63539 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene058498 | MS.gene63539 | 0.83301 | 6.82E-56 | -1.69E-46 |
| MS.gene058500 | MS.gene63539 | 0.820594 | 6.32E-53 | -1.69E-46 |
| MS.gene058595 | MS.gene63539 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene059710 | MS.gene63539 | 0.849629 | 2.86E-60 | -1.69E-46 |
| MS.gene059830 | MS.gene63539 | 0.810966 | 8.86E-51 | -1.69E-46 |
| MS.gene059952 | MS.gene63539 | 0.85883 | 6.29E-63 | -1.69E-46 |
| MS.gene060297 | MS.gene63539 | 0.834189 | 3.46E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene63539 | 0.818244 | 2.17E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene63539 | 0.800149 | 1.65E-48 | -1.69E-46 |
| MS.gene060850 | MS.gene63539 | 0.81316 | 2.95E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene63539 | 0.835326 | 1.79E-56 | -1.69E-46 |
| MS.gene060852 | MS.gene63539 | 0.834551 | 2.81E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene63539 | 0.831936 | 1.26E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene63539 | 0.812161 | 4.87E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene63539 | 0.809899 | 1.51E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63539 | MS.gene39623 | PPI |
| MS.gene30433 | MS.gene63539 | PPI |
| MS.gene63539 | MS.gene02469 | PPI |
| MS.gene63539 | MS.gene29842 | PPI |
| MS.gene26532 | MS.gene63539 | PPI |
| MS.gene47479 | MS.gene63539 | PPI |
| MS.gene008767 | MS.gene63539 | PPI |
| MS.gene35613 | MS.gene63539 | PPI |
| MS.gene63539 | MS.gene022502 | PPI |
| MS.gene63539 | MS.gene23196 | PPI |
| MS.gene52355 | MS.gene63539 | PPI |
| MS.gene63539 | MS.gene043662 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63539.t1 | MTR_3g010010 | 98.884 | 448 | 4 | 1 | 1 | 448 | 43 | 489 | 0.0 | 917 |
| MS.gene63539.t1 | MTR_3g010010 | 98.884 | 448 | 4 | 1 | 1 | 448 | 1 | 447 | 0.0 | 917 |
| MS.gene63539.t1 | MTR_2g028050 | 73.378 | 447 | 119 | 0 | 1 | 447 | 1 | 447 | 0.0 | 681 |
| MS.gene63539.t1 | MTR_7g022190 | 65.777 | 412 | 140 | 1 | 35 | 446 | 28 | 438 | 0.0 | 593 |
| MS.gene63539.t1 | MTR_3g074070 | 58.000 | 400 | 167 | 1 | 49 | 448 | 59 | 457 | 3.55e-177 | 503 |
| MS.gene63539.t1 | MTR_3g074070 | 58.145 | 399 | 166 | 1 | 50 | 448 | 88 | 485 | 4.03e-176 | 502 |
| MS.gene63539.t1 | MTR_3g074070 | 57.855 | 401 | 167 | 2 | 49 | 448 | 59 | 458 | 6.35e-176 | 500 |
| MS.gene63539.t1 | MTR_3g010110 | 75.490 | 306 | 51 | 3 | 1 | 305 | 1 | 283 | 6.54e-160 | 453 |
| MS.gene63539.t1 | MTR_3g074070 | 59.306 | 317 | 128 | 1 | 132 | 448 | 28 | 343 | 2.27e-142 | 410 |
| MS.gene63539.t1 | MTR_3g074070 | 57.860 | 299 | 125 | 1 | 150 | 448 | 1 | 298 | 4.48e-130 | 378 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63539.t1 | AT1G55680 | 76.940 | 451 | 95 | 2 | 1 | 448 | 1 | 445 | 0.0 | 714 |
| MS.gene63539.t1 | AT3G13340 | 80.340 | 412 | 81 | 0 | 37 | 448 | 36 | 447 | 0.0 | 709 |
| MS.gene63539.t1 | AT3G13340 | 80.340 | 412 | 81 | 0 | 37 | 448 | 36 | 447 | 0.0 | 709 |
| MS.gene63539.t1 | AT3G13340 | 80.340 | 412 | 81 | 0 | 37 | 448 | 36 | 447 | 0.0 | 709 |
| MS.gene63539.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene63539.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene63539.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene63539.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene63539.t1 | AT5G56190 | 73.469 | 441 | 110 | 3 | 10 | 448 | 6 | 441 | 0.0 | 695 |
| MS.gene63539.t1 | AT5G56190 | 73.469 | 441 | 110 | 3 | 10 | 448 | 6 | 441 | 0.0 | 695 |
| MS.gene63539.t1 | AT5G56190 | 73.469 | 441 | 110 | 3 | 10 | 448 | 27 | 462 | 0.0 | 694 |
| MS.gene63539.t1 | AT1G78070 | 53.846 | 442 | 203 | 1 | 8 | 448 | 8 | 449 | 8.94e-179 | 507 |
| MS.gene63539.t1 | AT1G36070 | 54.187 | 406 | 183 | 2 | 45 | 447 | 11 | 416 | 4.10e-167 | 476 |
| MS.gene63539.t1 | AT1G36070 | 53.528 | 411 | 188 | 2 | 40 | 447 | 7 | 417 | 1.05e-166 | 476 |
| MS.gene63539.t1 | AT1G36070 | 55.051 | 396 | 175 | 2 | 55 | 447 | 4 | 399 | 1.31e-166 | 474 |
| MS.gene63539.t1 | AT1G78070 | 58.991 | 317 | 130 | 0 | 131 | 447 | 23 | 339 | 2.29e-144 | 416 |
| MS.gene63539.t1 | AT1G78070 | 58.917 | 314 | 129 | 0 | 134 | 447 | 25 | 338 | 2.97e-143 | 413 |
| MS.gene63539.t1 | AT1G36070 | 55.369 | 298 | 133 | 0 | 150 | 447 | 1 | 298 | 8.75e-127 | 369 |
| MS.gene63539.t1 | AT1G36070 | 55.369 | 298 | 133 | 0 | 150 | 447 | 1 | 298 | 8.75e-127 | 369 |
Find 118 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACTATTGCTCCATTATC+TGG | 0.125977 | 3.3:-5105725 | MS.gene63539:CDS |
| TCTGGTTGCTGGAGGATTTC+AGG | 0.127364 | 3.3:-5107446 | MS.gene63539:CDS |
| TCTGAAGTACTCAATGTTTC+TGG | 0.174983 | 3.3:-5107742 | MS.gene63539:CDS |
| GCTTATGCAGTTGAGGAATT+TGG | 0.211449 | 3.3:-5107845 | MS.gene63539:intron |
| GAACAAGAAATTGATTTCTT+TGG | 0.221456 | 3.3:-5105461 | MS.gene63539:CDS |
| CCCTGACCTGTCCCCTGAAT+GGG | 0.249837 | 3.3:+5109301 | None:intergenic |
| ATGAAAAGGGATTCGGTATC+TGG | 0.289000 | 3.3:+5105413 | None:intergenic |
| TGCAGTTGAGGAATTTGGTT+TGG | 0.296738 | 3.3:-5107840 | MS.gene63539:intron |
| GATTTCTTTGGTGAGATATC+AGG | 0.300013 | 3.3:-5105449 | MS.gene63539:CDS |
| GAGTCAACCAACATACTTTC+AGG | 0.305096 | 3.3:+5105874 | None:intergenic |
| TATGGTAGCCTTCTCGAATA+TGG | 0.308564 | 3.3:-5105371 | MS.gene63539:CDS |
| AGGACAAAACCTGTCGGATT+TGG | 0.308920 | 3.3:-5105637 | MS.gene63539:CDS |
| CTGGTTGCTGGAGGATTTCA+GGG | 0.323770 | 3.3:-5107445 | MS.gene63539:CDS |
| AATCAAGGTATGAGTAATTA+TGG | 0.324026 | 3.3:+5105342 | None:intergenic |
| TCCCTGACCTGTCCCCTGAA+TGG | 0.330861 | 3.3:+5109300 | None:intergenic |
| TAATCTAAGTGCCCAGATAA+TGG | 0.343332 | 3.3:+5105713 | None:intergenic |
| TTCTTCCGATGGCAAGTATA+TGG | 0.344733 | 3.3:-5105543 | MS.gene63539:CDS |
| AACCCCTCCAATAGACTTCC+AGG | 0.350840 | 3.3:+5107511 | None:intergenic |
| TGGAATCAGAAACTTTGATA+TGG | 0.354680 | 3.3:-5106200 | MS.gene63539:CDS |
| TGCAGTAAAAGATAATCTTC+TGG | 0.365063 | 3.3:-5107464 | MS.gene63539:CDS |
| AAAGATAATCTTCTGGTTGC+TGG | 0.366888 | 3.3:-5107457 | MS.gene63539:CDS |
| ATGTTGGTTGACTCTCAAAA+TGG | 0.369339 | 3.3:-5105865 | MS.gene63539:CDS |
| GGACAAAACCTGTCGGATTT+GGG | 0.377449 | 3.3:-5105636 | MS.gene63539:CDS |
| CAAGTCAGTGGCAGTGTTGA+AGG | 0.422513 | 3.3:-5105597 | MS.gene63539:CDS |
| CCCCATTCAGGGGACAGGTC+AGG | 0.425032 | 3.3:-5109302 | MS.gene63539:CDS |
| CATTCACTGGCCAGGGAAAA+CGG | 0.432055 | 3.3:+5106152 | None:intergenic |
| GCAGTTGAGGAATTTGGTTT+GGG | 0.432688 | 3.3:-5107839 | MS.gene63539:intron |
| GGTAAGCTACTTCTGATTGT+TGG | 0.440890 | 3.3:-5105904 | MS.gene63539:CDS |
| GAAACATCCTGGAAGTCTAT+TGG | 0.441146 | 3.3:-5107518 | MS.gene63539:CDS |
| CTTCAACACTGCCACTGACT+TGG | 0.442971 | 3.3:+5105598 | None:intergenic |
| AAGACATCCAGGGGATTCCT+TGG | 0.444253 | 3.3:-5109397 | MS.gene63539:CDS |
| AAGAAGAGGACAAGACATCC+AGG | 0.448707 | 3.3:-5109408 | MS.gene63539:CDS |
| GGGGTTTGGGATCGTACTTA+TGG | 0.456853 | 3.3:-5105389 | MS.gene63539:CDS |
| AGCTGACACCAGGTCGATCT+AGG | 0.458539 | 3.3:+5106422 | None:intergenic |
| GATCCCAAACCCCAATGAAA+AGG | 0.464205 | 3.3:+5105399 | None:intergenic |
| CGGAAGAATGCCGGATTGAA+CGG | 0.464795 | 3.3:+5105558 | None:intergenic |
| ATTATTCATTCGCATCATCA+TGG | 0.467805 | 3.3:-5105694 | MS.gene63539:CDS |
| GAGGATGAAATTGATATTGA+TGG | 0.475862 | 3.3:-5109686 | MS.gene63539:CDS |
| GAGAAAGGTATCGGCAAACT+AGG | 0.482881 | 3.3:-5109355 | MS.gene63539:CDS |
| GTAGCAAAGGTTACCCCATC+GGG | 0.483017 | 3.3:+5105668 | None:intergenic |
| ATCCCAAACCCCAATGAAAA+GGG | 0.484751 | 3.3:+5105400 | None:intergenic |
| ATCAGAAGTAGCTTACCATC+TGG | 0.484849 | 3.3:+5105910 | None:intergenic |
| AACCCCAATGAAAAGGGATT+CGG | 0.487207 | 3.3:+5105406 | None:intergenic |
| AGTTTGCCGATACCTTTCTC+TGG | 0.487413 | 3.3:+5109358 | None:intergenic |
| GAGACTCACATTCACTGGCC+AGG | 0.487504 | 3.3:+5106144 | None:intergenic |
| GATGGGGTAACCTTTGCTAC+TGG | 0.493849 | 3.3:-5105665 | MS.gene63539:CDS |
| GGCTATCCCAAGGAATCCCC+TGG | 0.505261 | 3.3:+5109390 | None:intergenic |
| CCCATTCAGGGGACAGGTCA+GGG | 0.514571 | 3.3:-5109301 | MS.gene63539:CDS |
| GGTGAATCTATTAATAGAGA+GGG | 0.515268 | 3.3:-5109665 | MS.gene63539:CDS |
| GTGAATCTATTAATAGAGAG+GGG | 0.517319 | 3.3:-5109664 | MS.gene63539:CDS |
| ACCTTTCTCTGGTGATGCTA+AGG | 0.517839 | 3.3:+5109369 | None:intergenic |
| AGACTATTGCTCCATTATCT+GGG | 0.519813 | 3.3:-5105724 | MS.gene63539:CDS |
| GCAATTAAATCATTGAATCA+AGG | 0.521945 | 3.3:+5105327 | None:intergenic |
| ACAGCATCAAATAATGATTG+TGG | 0.525146 | 3.3:-5106220 | MS.gene63539:CDS |
| GTCATAAATCTCAATGGCAT+TGG | 0.527036 | 3.3:+5106363 | None:intergenic |
| CCTGACCTGTCCCCTGAATG+GGG | 0.532977 | 3.3:+5109302 | None:intergenic |
| TCCAAGAGACTCACATTCAC+TGG | 0.540290 | 3.3:+5106139 | None:intergenic |
| GTCCTGGTTTCCAGTAGCAA+AGG | 0.540720 | 3.3:+5105655 | None:intergenic |
| AGACATCCAGGGGATTCCTT+GGG | 0.540725 | 3.3:-5109396 | MS.gene63539:CDS |
| TCGGAGCCATCCGTTCAATC+CGG | 0.541521 | 3.3:-5105568 | MS.gene63539:CDS |
| TCAGGGTGAACTTATTTGCA+AGG | 0.543023 | 3.3:-5107428 | MS.gene63539:intron |
| CCGCATGTCCCAAATCCGAC+AGG | 0.548918 | 3.3:+5105628 | None:intergenic |
| ACTTGCCATCGGAAGAATGC+CGG | 0.550082 | 3.3:+5105549 | None:intergenic |
| TCAATCCGGCATTCTTCCGA+TGG | 0.550539 | 3.3:-5105554 | MS.gene63539:CDS |
| AAAGGGTTATTCACCTCTGA+TGG | 0.553941 | 3.3:+5107709 | None:intergenic |
| GCCTTAGCATCACCAGAGAA+AGG | 0.557742 | 3.3:-5109370 | MS.gene63539:CDS |
| GAGTACTTCAGAACTTGTGC+AGG | 0.558524 | 3.3:+5107753 | None:intergenic |
| AACCTTTGCTACTGGAAACC+AGG | 0.567978 | 3.3:-5105657 | MS.gene63539:CDS |
| TATACATGCACAAAATCTGC+AGG | 0.568505 | 3.3:+5105509 | None:intergenic |
| AGACTCACATTCACTGGCCA+GGG | 0.568609 | 3.3:+5106145 | None:intergenic |
| ACATCCTGGAAGTCTATTGG+AGG | 0.572776 | 3.3:-5107515 | MS.gene63539:CDS |
| AGGTGAGTCATAAATCTCAA+TGG | 0.572927 | 3.3:+5106357 | None:intergenic |
| CACAGTTCTCAGTGACACAC+TGG | 0.574143 | 3.3:-5107786 | MS.gene63539:CDS |
| CATCATCATGGAATCCCGAT+GGG | 0.574164 | 3.3:-5105682 | MS.gene63539:CDS |
| AGTAGCAAAGGTTACCCCAT+CGG | 0.575325 | 3.3:+5105667 | None:intergenic |
| TTCAGGGGACAGGTCAGGGA+AGG | 0.578143 | 3.3:-5109297 | MS.gene63539:intron |
| GCATCACCAGAGAAAGGTAT+CGG | 0.579593 | 3.3:-5109364 | MS.gene63539:CDS |
| GATAATCTTCTGGTTGCTGG+AGG | 0.580685 | 3.3:-5107454 | MS.gene63539:CDS |
| GCAGTGTTGAAGGGAAATCT+CGG | 0.584746 | 3.3:-5105587 | MS.gene63539:CDS |
| AGAATGCCGGATTGAACGGA+TGG | 0.586242 | 3.3:+5105562 | None:intergenic |
| AAGTCAGTGGCAGTGTTGAA+GGG | 0.588027 | 3.3:-5105596 | MS.gene63539:CDS |
| AATATTCAGCATCACCACCT+TGG | 0.588906 | 3.3:+5109738 | None:intergenic |
| CATGTATATGACGTGAAAAG+TGG | 0.589414 | 3.3:-5105494 | MS.gene63539:CDS |
| TCACTGAGAACTGTGACATA+AGG | 0.591263 | 3.3:+5107794 | None:intergenic |
| GGTATGAGTAATTATGGCGC+AGG | 0.592065 | 3.3:+5105348 | None:intergenic |
| TGGTGAATCTATTAATAGAG+AGG | 0.592341 | 3.3:-5109666 | MS.gene63539:CDS |
| CTTGAGCAAAAGCTGACACC+AGG | 0.594740 | 3.3:+5106412 | None:intergenic |
| CATACTTCTCTCAGTCCAGA+TGG | 0.594886 | 3.3:-5105925 | MS.gene63539:CDS |
| TGGACACGTTGCACCATCAG+AGG | 0.597064 | 3.3:-5107722 | MS.gene63539:intron |
| ACAGCTGCTCAAGCAAGAAG+AGG | 0.600613 | 3.3:-5109422 | MS.gene63539:CDS |
| CATCCTGGAAGTCTATTGGA+GGG | 0.605352 | 3.3:-5107514 | MS.gene63539:CDS |
| GATTGTAAAAGCACGGACAA+AGG | 0.607503 | 3.3:-5108342 | MS.gene63539:CDS |
| GCATCATCATGGAATCCCGA+TGG | 0.607878 | 3.3:-5105683 | MS.gene63539:CDS |
| GGTTGACTCTCAAAATGGAA+AGG | 0.608076 | 3.3:-5105860 | MS.gene63539:intron |
| GTGAAAATGTCTCATCGCCA+AGG | 0.610020 | 3.3:-5109755 | None:intergenic |
| TTGAGATTTATGACTCACCT+AGG | 0.613462 | 3.3:-5106354 | MS.gene63539:intron |
| TGCGGATGAATATGAAATGG+AGG | 0.616643 | 3.3:-5109714 | MS.gene63539:CDS |
| CTGACCTGTCCCCTGAATGG+GGG | 0.619493 | 3.3:+5109303 | None:intergenic |
| AGAAGAGGACAAGACATCCA+GGG | 0.624570 | 3.3:-5109407 | MS.gene63539:CDS |
| CAAACAGGATTGTAAAAGCA+CGG | 0.625588 | 3.3:-5108349 | MS.gene63539:intron |
| GGCGCAGGCCATATTCGAGA+AGG | 0.628359 | 3.3:+5105363 | None:intergenic |
| TGTAGATGAATATGATTACT+CGG | 0.633196 | 3.3:-5109624 | MS.gene63539:intron |
| ATCCTGGAAGTCTATTGGAG+GGG | 0.633313 | 3.3:-5107513 | MS.gene63539:CDS |
| ATATTCATCTACATCAGACT+CGG | 0.638509 | 3.3:+5109634 | None:intergenic |
| ATATGAAATGGAGGATGTAG+AGG | 0.641938 | 3.3:-5109705 | MS.gene63539:CDS |
| CCTGTCGGATTTGGGACATG+CGG | 0.645322 | 3.3:-5105628 | MS.gene63539:CDS |
| AGACAATCCTGAAAGTATGT+TGG | 0.648208 | 3.3:-5105881 | MS.gene63539:CDS |
| TGAATCTATTAATAGAGAGG+GGG | 0.652726 | 3.3:-5109663 | MS.gene63539:CDS |
| TATAGCCATATACTTGCCAT+CGG | 0.653031 | 3.3:+5105538 | None:intergenic |
| GCGGAATTTATCCAAGTCAG+TGG | 0.655008 | 3.3:-5105609 | MS.gene63539:CDS |
| GAATCTATTAATAGAGAGGG+GGG | 0.659743 | 3.3:-5109662 | MS.gene63539:CDS |
| GAAGAGGACAAGACATCCAG+GGG | 0.669643 | 3.3:-5109406 | MS.gene63539:CDS |
| ATGCAGCACCTAGATCGACC+TGG | 0.674184 | 3.3:-5106430 | MS.gene63539:intron |
| ATGTATATGACGTGAAAAGT+GGG | 0.674883 | 3.3:-5105493 | MS.gene63539:CDS |
| ATCATCATGGAATCCCGATG+GGG | 0.681047 | 3.3:-5105681 | MS.gene63539:CDS |
| GAAACCAGGACAAAACCTGT+CGG | 0.683580 | 3.3:-5105643 | MS.gene63539:CDS |
| GTGATGCTAAGGCTATCCCA+AGG | 0.695903 | 3.3:+5109380 | None:intergenic |
| AAAATGTCTCATCGCCAAGG+TGG | 0.737513 | 3.3:-5109752 | MS.gene63539:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAACTATAAAAAAAC+AGG | + | chr3.3:5108540-5108559 | None:intergenic | 10.0% |
| !! | CATAAAAAAAAAAAAAAAAG+AGG | + | chr3.3:5107216-5107235 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATAATGGATAT+TGG | - | chr3.3:5108780-5108799 | MS.gene63539:intron | 10.0% |
| !! | ATAAATAAGATTTATGTTCT+GGG | - | chr3.3:5108227-5108246 | MS.gene63539:intron | 15.0% |
| !! | TATAAATAAGATTTATGTTC+TGG | - | chr3.3:5108226-5108245 | MS.gene63539:intron | 15.0% |
| !! | TATCAAAATAATTAAAGAGA+AGG | + | chr3.3:5108763-5108782 | None:intergenic | 15.0% |
| !! | TATTATTATCTATATCAAAC+AGG | - | chr3.3:5106716-5106735 | MS.gene63539:intron | 15.0% |
| !! | TGATATAGATAATAATAAAC+AGG | + | chr3.3:5106713-5106732 | None:intergenic | 15.0% |
| !!! | TCTGAAATATCAAAAAAAAA+AGG | + | chr3.3:5105822-5105841 | None:intergenic | 15.0% |
| !! | AAAACATAAAACAAATCCTA+TGG | + | chr3.3:5108585-5108604 | None:intergenic | 20.0% |
| !! | AAACATAAAACAAATCCTAT+GGG | + | chr3.3:5108584-5108603 | None:intergenic | 20.0% |
| !! | AGAATATAAATAGAAAGCAA+AGG | + | chr3.3:5109106-5109125 | None:intergenic | 20.0% |
| !! | ATAACTACAATATTACTCAT+AGG | + | chr3.3:5105609-5105628 | None:intergenic | 20.0% |
| !! | CTAAAATTGTTCATTTAAGA+GGG | + | chr3.3:5108995-5109014 | None:intergenic | 20.0% |
| !! | CTTAAAATTGTGAGATATTT+AGG | + | chr3.3:5108284-5108303 | None:intergenic | 20.0% |
| !! | TAAAATTGTTCATTTAAGAG+GGG | + | chr3.3:5108994-5109013 | None:intergenic | 20.0% |
| !! | TAACTACAATATTACTCATA+GGG | + | chr3.3:5105608-5105627 | None:intergenic | 20.0% |
| !! | TATGAGTAATATTGTAGTTA+TGG | - | chr3.3:5105608-5105627 | MS.gene63539:CDS | 20.0% |
| !! | TGATGAATTATTTACTTAGA+AGG | + | chr3.3:5105557-5105576 | None:intergenic | 20.0% |
| !!! | AAATGAACAATTTTAGCATT+AGG | - | chr3.3:5108999-5109018 | MS.gene63539:intron | 20.0% |
| !!! | TTTTCAGGTAATATTGTAAA+AGG | - | chr3.3:5107889-5107908 | MS.gene63539:intron | 20.0% |
| !!! | TTTTTCATTCATGTTATCTA+TGG | - | chr3.3:5108447-5108466 | MS.gene63539:intron | 20.0% |
| ! | AAATATAATCGCTATGACAT+AGG | - | chr3.3:5106401-5106420 | MS.gene63539:CDS | 25.0% |
| ! | AACATAAAACAAATCCTATG+GGG | + | chr3.3:5108583-5108602 | None:intergenic | 25.0% |
| ! | AACTTCTTTAATCATGTCAT+TGG | - | chr3.3:5105846-5105865 | MS.gene63539:intron | 25.0% |
| ! | AATAATAAACAGGTAAGCAT+AGG | + | chr3.3:5106703-5106722 | None:intergenic | 25.0% |
| ! | AATATAATCGCTATGACATA+GGG | - | chr3.3:5106402-5106421 | MS.gene63539:CDS | 25.0% |
| ! | AATCAAGGTATGAGTAATTA+TGG | + | chr3.3:5109741-5109760 | None:intergenic | 25.0% |
| ! | AGTAGATAAGAAAAACATAG+AGG | + | chr3.3:5106217-5106236 | None:intergenic | 25.0% |
| ! | ATAATACTAAGTATATCTCC+TGG | + | chr3.3:5106358-5106377 | None:intergenic | 25.0% |
| ! | ATGTTTATATCATAGTCATC+TGG | + | chr3.3:5106678-5106697 | None:intergenic | 25.0% |
| ! | ATTGATTATTTGACCGAAAA+AGG | + | chr3.3:5109258-5109277 | None:intergenic | 25.0% |
| ! | GCTAAAATTGTTCATTTAAG+AGG | + | chr3.3:5108996-5109015 | None:intergenic | 25.0% |
| ! | GTGTGTTAAATCAATAATCA+CGG | + | chr3.3:5108808-5108827 | None:intergenic | 25.0% |
| ! | TGAATTATTTACTTAGAAGG+AGG | + | chr3.3:5105554-5105573 | None:intergenic | 25.0% |
| ! | TGTAGATGAATATGATTACT+CGG | - | chr3.3:5105456-5105475 | MS.gene63539:CDS | 25.0% |
| ! | TGTCAGAAAAATTTATCTTG+TGG | - | chr3.3:5106981-5107000 | MS.gene63539:intron | 25.0% |
| ! | TGTTAAGAATATGATGTACA+TGG | - | chr3.3:5105520-5105539 | MS.gene63539:CDS | 25.0% |
| ! | TTATGCTCAATTAAAACAGA+TGG | + | chr3.3:5106026-5106045 | None:intergenic | 25.0% |
| ! | TTCAGTAACAAAGAAAGTAA+TGG | + | chr3.3:5108630-5108649 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTGAGATATCAC+TGG | - | chr3.3:5106122-5106141 | MS.gene63539:intron | 25.0% |
| ! | TTTCATCTATGTAAAGATAC+TGG | - | chr3.3:5107924-5107943 | MS.gene63539:intron | 25.0% |
| !! | ATCAACAATTCTTCATTTTC+AGG | - | chr3.3:5106803-5106822 | MS.gene63539:intron | 25.0% |
| !! | ATGAGCATTGCTTTAATAAT+TGG | - | chr3.3:5108340-5108359 | MS.gene63539:CDS | 25.0% |
| !! | GAACAAGAAATTGATTTCTT+TGG | - | chr3.3:5109619-5109638 | MS.gene63539:intron | 25.0% |
| !! | GATACTCATTTTATGAGTTT+AGG | - | chr3.3:5106760-5106779 | MS.gene63539:intron | 25.0% |
| !!! | AAGATTTTGACGTTGATTAA+AGG | + | chr3.3:5107955-5107974 | None:intergenic | 25.0% |
| !!! | AAGTAAAAGCATTAGGTAAA+GGG | + | chr3.3:5107391-5107410 | None:intergenic | 25.0% |
| !!! | ACGATTTTTAGCATTTTCTT+AGG | + | chr3.3:5106278-5106297 | None:intergenic | 25.0% |
| !!! | AGATTTTGACGTTGATTAAA+GGG | + | chr3.3:5107954-5107973 | None:intergenic | 25.0% |
| !!! | AGTCATCATTTTTGTAAAAG+AGG | + | chr3.3:5108032-5108051 | None:intergenic | 25.0% |
| !!! | ATAATCTCTACTTTGTTTTG+TGG | - | chr3.3:5107704-5107723 | MS.gene63539:intron | 25.0% |
| !!! | ATAGTCAATACGTCTTTTTT+TGG | - | chr3.3:5106476-5106495 | MS.gene63539:intron | 25.0% |
| !!! | ATATCTCACTTTTTAAAGCA+AGG | + | chr3.3:5106119-5106138 | None:intergenic | 25.0% |
| !!! | GCATTTTTTTAAATCTGTTG+TGG | - | chr3.3:5107732-5107751 | MS.gene63539:CDS | 25.0% |
| AAAAAACAGGTAGAGTCTAA+TGG | + | chr3.3:5108527-5108546 | None:intergenic | 30.0% | |
| AAAAACAGGTAGAGTCTAAT+GGG | + | chr3.3:5108526-5108545 | None:intergenic | 30.0% | |
| ACAGCATCAAATAATGATTG+TGG | - | chr3.3:5108860-5108879 | MS.gene63539:intron | 30.0% | |
| ACATAAAACAAATCCTATGG+GGG | + | chr3.3:5108582-5108601 | None:intergenic | 30.0% | |
| AGAAGGAAAACTAAATACCT+AGG | + | chr3.3:5108746-5108765 | None:intergenic | 30.0% | |
| AGCATTGCTTTAATAATTGG+TGG | - | chr3.3:5108343-5108362 | MS.gene63539:CDS | 30.0% | |
| AGGTGAGTAAACTAAATTAG+AGG | + | chr3.3:5106197-5106216 | None:intergenic | 30.0% | |
| ATATAATCGCTATGACATAG+GGG | - | chr3.3:5106403-5106422 | MS.gene63539:CDS | 30.0% | |
| ATATTCATCTACATCAGACT+CGG | + | chr3.3:5105449-5105468 | None:intergenic | 30.0% | |
| ATGTATATGACGTGAAAAGT+GGG | - | chr3.3:5109587-5109606 | MS.gene63539:intron | 30.0% | |
| ATTATTCATTCGCATCATCA+TGG | - | chr3.3:5109386-5109405 | MS.gene63539:CDS | 30.0% | |
| CAGATTCCTTTCATGAAATT+GGG | + | chr3.3:5105985-5106004 | None:intergenic | 30.0% | |
| CATTATGTTCAAATGTTTCG+CGG | + | chr3.3:5107793-5107812 | None:intergenic | 30.0% | |
| GACAGTAAAATACTTGATTG+CGG | - | chr3.3:5107003-5107022 | MS.gene63539:intron | 30.0% | |
| GAGGATGAAATTGATATTGA+TGG | - | chr3.3:5105394-5105413 | MS.gene63539:CDS | 30.0% | |
| GAGTAATATTGTAGTTATGG+TGG | - | chr3.3:5105611-5105630 | MS.gene63539:CDS | 30.0% | |
| GGTGAATCTATTAATAGAGA+GGG | - | chr3.3:5105415-5105434 | MS.gene63539:CDS | 30.0% | |
| GTGAATCTATTAATAGAGAG+GGG | - | chr3.3:5105416-5105435 | MS.gene63539:CDS | 30.0% | |
| TATCTATGGTTCAGCTAATT+AGG | - | chr3.3:5108461-5108480 | MS.gene63539:intron | 30.0% | |
| TGAATCTATTAATAGAGAGG+GGG | - | chr3.3:5105417-5105436 | MS.gene63539:CDS | 30.0% | |
| TGAGAAGTAGCTAAAAACTA+AGG | + | chr3.3:5108409-5108428 | None:intergenic | 30.0% | |
| TGCAGTAAAAGATAATCTTC+TGG | - | chr3.3:5107616-5107635 | MS.gene63539:intron | 30.0% | |
| TGGAATCAGAAACTTTGATA+TGG | - | chr3.3:5108880-5108899 | MS.gene63539:intron | 30.0% | |
| TGGTGAATCTATTAATAGAG+AGG | - | chr3.3:5105414-5105433 | MS.gene63539:CDS | 30.0% | |
| TTGAAATTGTATAGACCACA+TGG | - | chr3.3:5108308-5108327 | MS.gene63539:CDS | 30.0% | |
| TTTAACTACTACACTTGCAT+TGG | - | chr3.3:5106085-5106104 | MS.gene63539:intron | 30.0% | |
| ! | AAGTAATGGAAGTATATCAG+CGG | + | chr3.3:5108616-5108635 | None:intergenic | 30.0% |
| ! | AGCTTTGTAGGTATATTTGA+GGG | + | chr3.3:5106583-5106602 | None:intergenic | 30.0% |
| ! | AGTTCTGCATATGCATATTT+TGG | - | chr3.3:5108491-5108510 | MS.gene63539:intron | 30.0% |
| ! | ATCTACTCTGGTTTCTATAA+TGG | - | chr3.3:5106841-5106860 | MS.gene63539:intron | 30.0% |
| ! | TTTTATTGTCAGAAACATCC+TGG | - | chr3.3:5107551-5107570 | MS.gene63539:intron | 30.0% |
| ! | TTTTGCGGATGAATATGAAA+TGG | - | chr3.3:5105363-5105382 | MS.gene63539:CDS | 30.0% |
| ! | TTTTTATGCTTATGCAGTTG+AGG | - | chr3.3:5107228-5107247 | MS.gene63539:intron | 30.0% |
| !! | ATCATTTTTGTAAAAGAGGC+TGG | + | chr3.3:5108028-5108047 | None:intergenic | 30.0% |
| !! | CAAGTAAAAGCATTAGGTAA+AGG | + | chr3.3:5107392-5107411 | None:intergenic | 30.0% |
| !! | CTGGTTTCTATAATGGATTA+AGG | - | chr3.3:5106848-5106867 | MS.gene63539:intron | 30.0% |
| !! | TGGTAATGAGTAACTTTTTC+AGG | - | chr3.3:5107874-5107893 | MS.gene63539:intron | 30.0% |
| !!! | TAGTTTTTAGCTACTTCTCA+AGG | - | chr3.3:5108409-5108428 | MS.gene63539:intron | 30.0% |
| AAAACTAAGGCTCGAATTGA+AGG | + | chr3.3:5108396-5108415 | None:intergenic | 35.0% | |
| AAATTGTGCAGTCTGTTCAT+AGG | - | chr3.3:5107116-5107135 | MS.gene63539:intron | 35.0% | |
| AGACTATTGCTCCATTATCT+GGG | - | chr3.3:5109356-5109375 | MS.gene63539:CDS | 35.0% | |
| AGGAAAAAATGTCGCAATCA+AGG | + | chr3.3:5106258-5106277 | None:intergenic | 35.0% | |
| AGGAAACATTGCTTACACTT+AGG | - | chr3.3:5109019-5109038 | MS.gene63539:intron | 35.0% | |
| AGGTGAGTCATAAATCTCAA+TGG | + | chr3.3:5108726-5108745 | None:intergenic | 35.0% | |
| ATAGAAACCAGAGTAGATAC+AGG | + | chr3.3:5106839-5106858 | None:intergenic | 35.0% | |
| ATATGAAATGGAGGATGTAG+AGG | - | chr3.3:5105375-5105394 | MS.gene63539:CDS | 35.0% | |
| ATGAAAATATCCCCCATTCA+GGG | - | chr3.3:5105767-5105786 | MS.gene63539:intron | 35.0% | |
| ATGAGGCTGTTAATATCATG+TGG | + | chr3.3:5108082-5108101 | None:intergenic | 35.0% | |
| CAAACAGGATTGTAAAAGCA+CGG | - | chr3.3:5106731-5106750 | MS.gene63539:intron | 35.0% | |
| CATGTATATGACGTGAAAAG+TGG | - | chr3.3:5109586-5109605 | MS.gene63539:intron | 35.0% | |
| CTTTGTAGGTATATTTGAGG+GGG | + | chr3.3:5106581-5106600 | None:intergenic | 35.0% | |
| GAATCTATTAATAGAGAGGG+GGG | - | chr3.3:5105418-5105437 | MS.gene63539:CDS | 35.0% | |
| GATTTCTTTGGTGAGATATC+AGG | - | chr3.3:5109631-5109650 | MS.gene63539:CDS | 35.0% | |
| GCAGATTCCTTTCATGAAAT+TGG | + | chr3.3:5105986-5106005 | None:intergenic | 35.0% | |
| GCTCATTAAATAGTTCCATG+TGG | + | chr3.3:5108326-5108345 | None:intergenic | 35.0% | |
| GCTTTGTAGGTATATTTGAG+GGG | + | chr3.3:5106582-5106601 | None:intergenic | 35.0% | |
| GTCATAAATCTCAATGGCAT+TGG | + | chr3.3:5108720-5108739 | None:intergenic | 35.0% | |
| GTGGTGCAACATGATTTAAA+GGG | + | chr3.3:5107420-5107439 | None:intergenic | 35.0% | |
| TAATCTAAGTGCCCAGATAA+TGG | + | chr3.3:5109370-5109389 | None:intergenic | 35.0% | |
| TAGGACATTTAACTGCACAA+TGG | - | chr3.3:5106877-5106896 | MS.gene63539:intron | 35.0% | |
| TATACATGCACAAAATCTGC+AGG | + | chr3.3:5109574-5109593 | None:intergenic | 35.0% | |
| TATAGCCATATACTTGCCAT+CGG | + | chr3.3:5109545-5109564 | None:intergenic | 35.0% | |
| TATGAAAATATCCCCCATTC+AGG | - | chr3.3:5105766-5105785 | MS.gene63539:intron | 35.0% | |
| TCCAATTTCGATGCTATATG+AGG | + | chr3.3:5108099-5108118 | None:intergenic | 35.0% | |
| TGTGGTGAATTATGTAACGA+TGG | + | chr3.3:5105898-5105917 | None:intergenic | 35.0% | |
| TGTTCATTTAAGAGGGGATA+GGG | + | chr3.3:5108988-5109007 | None:intergenic | 35.0% | |
| TTGAGATTTATGACTCACCT+AGG | - | chr3.3:5108726-5108745 | MS.gene63539:intron | 35.0% | |
| TTGATTTAACACACCTTTCC+TGG | - | chr3.3:5108814-5108833 | MS.gene63539:intron | 35.0% | |
| TTGTTCATTTAAGAGGGGAT+AGG | + | chr3.3:5108989-5109008 | None:intergenic | 35.0% | |
| ! | AAAGATAATCTTCTGGTTGC+TGG | - | chr3.3:5107623-5107642 | MS.gene63539:intron | 35.0% |
| ! | AGACAATCCTGAAAGTATGT+TGG | - | chr3.3:5109199-5109218 | MS.gene63539:intron | 35.0% |
| ! | ATACCGAATCCCTTTTCATT+GGG | - | chr3.3:5109671-5109690 | MS.gene63539:CDS | 35.0% |
| ! | ATCGAAATTGGATGATGATG+TGG | - | chr3.3:5108107-5108126 | MS.gene63539:intron | 35.0% |
| ! | ATGTTGGTTGACTCTCAAAA+TGG | - | chr3.3:5109215-5109234 | MS.gene63539:intron | 35.0% |
| ! | ATTCTTTTCAGTGTGTGGTA+TGG | + | chr3.3:5106649-5106668 | None:intergenic | 35.0% |
| ! | ATTTTTGTAAAAGAGGCTGG+CGG | + | chr3.3:5108025-5108044 | None:intergenic | 35.0% |
| ! | GAGCTTTGTAGGTATATTTG+AGG | + | chr3.3:5106584-5106603 | None:intergenic | 35.0% |
| ! | TCACAATTCTTTTCAGTGTG+TGG | + | chr3.3:5106654-5106673 | None:intergenic | 35.0% |
| ! | TCTGAAGTACTCAATGTTTC+TGG | - | chr3.3:5107338-5107357 | MS.gene63539:intron | 35.0% |
| ! | TTCTTTTCAGTGTGTGGTAT+GGG | + | chr3.3:5106648-5106667 | None:intergenic | 35.0% |
| !! | AAGGATTGGTTTGCAACTAA+GGG | + | chr3.3:5106325-5106344 | None:intergenic | 35.0% |
| !! | GCTATGCAAGTAAAAGCATT+AGG | + | chr3.3:5107398-5107417 | None:intergenic | 35.0% |
| !! | TAAGGATTGGTTTGCAACTA+AGG | + | chr3.3:5106326-5106345 | None:intergenic | 35.0% |
| !! | TAATGGATTAAGGATGCACT+AGG | - | chr3.3:5106858-5106877 | MS.gene63539:intron | 35.0% |
| !! | TGGTGATGCTGAATATTTTG+CGG | - | chr3.3:5105348-5105367 | MS.gene63539:CDS | 35.0% |
| !!! | GTCAATACGTCTTTTTTTGG+TGG | - | chr3.3:5106479-5106498 | MS.gene63539:intron | 35.0% |
| AAAGGGTTATTCACCTCTGA+TGG | + | chr3.3:5107374-5107393 | None:intergenic | 40.0% | |
| AACCCCAATGAAAAGGGATT+CGG | + | chr3.3:5109677-5109696 | None:intergenic | 40.0% | |
| AATATTCAGCATCACCACCT+TGG | + | chr3.3:5105345-5105364 | None:intergenic | 40.0% | |
| AATTGTTAGCGAGAACTGTG+AGG | - | chr3.3:5107055-5107074 | MS.gene63539:intron | 40.0% | |
| ACAGCAAACAAAGTGAAGTG+GGG | + | chr3.3:5108173-5108192 | None:intergenic | 40.0% | |
| ATCAGAAGTAGCTTACCATC+TGG | + | chr3.3:5109173-5109192 | None:intergenic | 40.0% | |
| ATCCCAAACCCCAATGAAAA+GGG | + | chr3.3:5109683-5109702 | None:intergenic | 40.0% | |
| CACAGCAAACAAAGTGAAGT+GGG | + | chr3.3:5108174-5108193 | None:intergenic | 40.0% | |
| CAGACTATTGCTCCATTATC+TGG | - | chr3.3:5109355-5109374 | MS.gene63539:CDS | 40.0% | |
| CAGAGACTTAGGACTTTACA+GGG | + | chr3.3:5107989-5108008 | None:intergenic | 40.0% | |
| GAAACATCCTGGAAGTCTAT+TGG | - | chr3.3:5107562-5107581 | MS.gene63539:intron | 40.0% | |
| GAGTCAACCAACATACTTTC+AGG | + | chr3.3:5109209-5109228 | None:intergenic | 40.0% | |
| GCTGTTAATATCATGTGGCA+TGG | + | chr3.3:5108077-5108096 | None:intergenic | 40.0% | |
| GCTTATGCAGTTGAGGAATT+TGG | - | chr3.3:5107235-5107254 | MS.gene63539:intron | 40.0% | |
| GGTAAGCTACTTCTGATTGT+TGG | - | chr3.3:5109176-5109195 | MS.gene63539:intron | 40.0% | |
| GGTGGTGCAACATGATTTAA+AGG | + | chr3.3:5107421-5107440 | None:intergenic | 40.0% | |
| TACACTTAGGCTGTACTGTA+TGG | - | chr3.3:5109032-5109051 | MS.gene63539:intron | 40.0% | |
| TATCATGTGGCATGGCAATA+TGG | + | chr3.3:5108069-5108088 | None:intergenic | 40.0% | |
| TATGGTAGCCTTCTCGAATA+TGG | - | chr3.3:5109709-5109728 | MS.gene63539:CDS | 40.0% | |
| TCACTGAGAACTGTGACATA+AGG | + | chr3.3:5107289-5107308 | None:intergenic | 40.0% | |
| TCAGGGTGAACTTATTTGCA+AGG | - | chr3.3:5107652-5107671 | MS.gene63539:intron | 40.0% | |
| TCCGCCACTAAATACTTTGA+GGG | - | chr3.3:5106602-5106621 | MS.gene63539:intron | 40.0% | |
| TGAAAATATCCCCCATTCAG+GGG | - | chr3.3:5105768-5105787 | MS.gene63539:intron | 40.0% | |
| TGCAGTTGAGGAATTTGGTT+TGG | - | chr3.3:5107240-5107259 | MS.gene63539:intron | 40.0% | |
| TGCGGATGAATATGAAATGG+AGG | - | chr3.3:5105366-5105385 | MS.gene63539:CDS | 40.0% | |
| TGCTGCAGCATAGCATAAAA+AGG | + | chr3.3:5109137-5109156 | None:intergenic | 40.0% | |
| TGTGAATCTTGAGTAGTACC+TGG | - | chr3.3:5107140-5107159 | MS.gene63539:intron | 40.0% | |
| TTCTTCCGATGGCAAGTATA+TGG | - | chr3.3:5109537-5109556 | MS.gene63539:intron | 40.0% | |
| ! | AATCCCTTTTCATTGGGGTT+TGG | - | chr3.3:5109677-5109696 | MS.gene63539:CDS | 40.0% |
| ! | AATGGAAGTATATCAGCGGA+TGG | + | chr3.3:5108612-5108631 | None:intergenic | 40.0% |
| ! | ACCCTCAAAGTATTTAGTGG+CGG | + | chr3.3:5106606-5106625 | None:intergenic | 40.0% |
| ! | ATCCCTTTTCATTGGGGTTT+GGG | - | chr3.3:5109678-5109697 | MS.gene63539:CDS | 40.0% |
| ! | ATGAAAAGGGATTCGGTATC+TGG | + | chr3.3:5109670-5109689 | None:intergenic | 40.0% |
| ! | GATACCGAATCCCTTTTCAT+TGG | - | chr3.3:5109670-5109689 | MS.gene63539:CDS | 40.0% |
| ! | GATTGTAAAAGCACGGACAA+AGG | - | chr3.3:5106738-5106757 | MS.gene63539:intron | 40.0% |
| ! | GCAACCCTCAAAGTATTTAG+TGG | + | chr3.3:5106609-5106628 | None:intergenic | 40.0% |
| ! | GCAGTTGAGGAATTTGGTTT+GGG | - | chr3.3:5107241-5107260 | MS.gene63539:intron | 40.0% |
| ! | GCCTCATATAGCATCGAAAT+TGG | - | chr3.3:5108095-5108114 | MS.gene63539:intron | 40.0% |
| ! | GGTTGACTCTCAAAATGGAA+AGG | - | chr3.3:5109220-5109239 | MS.gene63539:intron | 40.0% |
| ! | GTAGTACTCTACGCCTTTTT+CGG | - | chr3.3:5109242-5109261 | MS.gene63539:intron | 40.0% |
| ! | TACCGAATCCCTTTTCATTG+GGG | - | chr3.3:5109672-5109691 | MS.gene63539:CDS | 40.0% |
| !! | AGGATTGGTTTGCAACTAAG+GGG | + | chr3.3:5106324-5106343 | None:intergenic | 40.0% |
| AAAGCAAAGGAGTCACAGTG+GGG | + | chr3.3:5109093-5109112 | None:intergenic | 45.0% | |
| AACCTTTGCTACTGGAAACC+AGG | - | chr3.3:5109423-5109442 | MS.gene63539:CDS | 45.0% | |
| AAGAAGAGGACAAGACATCC+AGG | - | chr3.3:5105672-5105691 | MS.gene63539:CDS | 45.0% | |
| AAGTATATCTCCTGGCGTAG+TGG | + | chr3.3:5106350-5106369 | None:intergenic | 45.0% | |
| ACATCCTGGAAGTCTATTGG+AGG | - | chr3.3:5107565-5107584 | MS.gene63539:intron | 45.0% | |
| AGAAAGCAAAGGAGTCACAG+TGG | + | chr3.3:5109095-5109114 | None:intergenic | 45.0% | |
| AGAAGAGGACAAGACATCCA+GGG | - | chr3.3:5105673-5105692 | MS.gene63539:CDS | 45.0% | |
| AGGACAAAACCTGTCGGATT+TGG | - | chr3.3:5109443-5109462 | MS.gene63539:CDS | 45.0% | |
| AGTAGCAAAGGTTACCCCAT+CGG | + | chr3.3:5109416-5109435 | None:intergenic | 45.0% | |
| AGTAGTACCTGGCATGTCAT+AGG | - | chr3.3:5107151-5107170 | MS.gene63539:intron | 45.0% | |
| AGTTTGCCGATACCTTTCTC+TGG | + | chr3.3:5105725-5105744 | None:intergenic | 45.0% | |
| ATAACCAAGATCCGCCATTG+GGG | - | chr3.3:5106445-5106464 | MS.gene63539:intron | 45.0% | |
| ATCATCATGGAATCCCGATG+GGG | - | chr3.3:5109399-5109418 | MS.gene63539:CDS | 45.0% | |
| ATCCTGGAAGTCTATTGGAG+GGG | - | chr3.3:5107567-5107586 | MS.gene63539:intron | 45.0% | |
| ATTCATAGAGAACCGTGGAC+CGG | - | chr3.3:5105918-5105937 | MS.gene63539:CDS | 45.0% | |
| CAGCAAACAAAGTGAAGTGG+GGG | + | chr3.3:5108172-5108191 | None:intergenic | 45.0% | |
| CATAACCAAGATCCGCCATT+GGG | - | chr3.3:5106444-5106463 | MS.gene63539:intron | 45.0% | |
| CATACTTCTCTCAGTCCAGA+TGG | - | chr3.3:5109155-5109174 | MS.gene63539:intron | 45.0% | |
| CATCATCATGGAATCCCGAT+GGG | - | chr3.3:5109398-5109417 | MS.gene63539:CDS | 45.0% | |
| CATCCTGGAAGTCTATTGGA+GGG | - | chr3.3:5107566-5107585 | MS.gene63539:intron | 45.0% | |
| CCACAATTCATAGAGAACCG+TGG | - | chr3.3:5105913-5105932 | MS.gene63539:CDS | 45.0% | |
| CCACAGCAAACAAAGTGAAG+TGG | + | chr3.3:5108175-5108194 | None:intergenic | 45.0% | |
| CCACGGTTCTCTATGAATTG+TGG | + | chr3.3:5105916-5105935 | None:intergenic | 45.0% | |
| CTCCGCCACTAAATACTTTG+AGG | - | chr3.3:5106601-5106620 | MS.gene63539:intron | 45.0% | |
| GAAACCAGGACAAAACCTGT+CGG | - | chr3.3:5109437-5109456 | MS.gene63539:CDS | 45.0% | |
| GAAAGCAAAGGAGTCACAGT+GGG | + | chr3.3:5109094-5109113 | None:intergenic | 45.0% | |
| GAAAGTTGTAGCAACGCTCT+AGG | + | chr3.3:5108372-5108391 | None:intergenic | 45.0% | |
| GACTATGTATACCACCCCAA+TGG | + | chr3.3:5106462-5106481 | None:intergenic | 45.0% | |
| GAGTACTTCAGAACTTGTGC+AGG | + | chr3.3:5107330-5107349 | None:intergenic | 45.0% | |
| GATCCCAAACCCCAATGAAA+AGG | + | chr3.3:5109684-5109703 | None:intergenic | 45.0% | |
| GATTGCGGCTTCAAATCAAC+AGG | - | chr3.3:5107018-5107037 | MS.gene63539:intron | 45.0% | |
| GCAGACATGTGACTTACATG+TGG | - | chr3.3:5107854-5107873 | MS.gene63539:intron | 45.0% | |
| GCAGAGACTTAGGACTTTAC+AGG | + | chr3.3:5107990-5108009 | None:intergenic | 45.0% | |
| GCGGAATTTATCCAAGTCAG+TGG | - | chr3.3:5109471-5109490 | MS.gene63539:intron | 45.0% | |
| GGACAAAACCTGTCGGATTT+GGG | - | chr3.3:5109444-5109463 | MS.gene63539:CDS | 45.0% | |
| GGTATGAGTAATTATGGCGC+AGG | + | chr3.3:5109735-5109754 | None:intergenic | 45.0% | |
| GGTTCGCCCAATTTCATGAA+AGG | - | chr3.3:5105976-5105995 | MS.gene63539:intron | 45.0% | |
| GTAGCACGAGGTCTAAATGA+TGG | - | chr3.3:5107449-5107468 | MS.gene63539:CDS | 45.0% | |
| TAATCGCTATGACATAGGGG+TGG | - | chr3.3:5106406-5106425 | MS.gene63539:CDS | 45.0% | |
| TAGAACAAAGCTCCGGTGTA+CGG | + | chr3.3:5106170-5106189 | None:intergenic | 45.0% | |
| TATGTATACCACCCCAATGG+CGG | + | chr3.3:5106459-5106478 | None:intergenic | 45.0% | |
| TCATAACCAAGATCCGCCAT+TGG | - | chr3.3:5106443-5106462 | MS.gene63539:intron | 45.0% | |
| TCCAAGAGACTCACATTCAC+TGG | + | chr3.3:5108944-5108963 | None:intergenic | 45.0% | |
| TCGCAATCAAGGCTTGAACT+CGG | + | chr3.3:5106247-5106266 | None:intergenic | 45.0% | |
| TTCAAAGCCTATGACATGCC+AGG | + | chr3.3:5107161-5107180 | None:intergenic | 45.0% | |
| TTCAGTGTGTGGTATGGGTT+CGG | + | chr3.3:5106643-5106662 | None:intergenic | 45.0% | |
| ! | AAGTCAGTGGCAGTGTTGAA+GGG | - | chr3.3:5109484-5109503 | MS.gene63539:intron | 45.0% |
| ! | ACACCTTTCCTGGTTTGTAG+TGG | - | chr3.3:5108824-5108843 | MS.gene63539:intron | 45.0% |
| ! | ACCTTTCTCTGGTGATGCTA+AGG | + | chr3.3:5105714-5105733 | None:intergenic | 45.0% |
| ! | AGGAGTGTAGAACAAAGCTC+CGG | + | chr3.3:5106177-5106196 | None:intergenic | 45.0% |
| ! | ATTTAGTGGCGGAGCTTTGT+AGG | + | chr3.3:5106595-5106614 | None:intergenic | 45.0% |
| ! | CCACTTCACTTTGTTTGCTG+TGG | - | chr3.3:5108172-5108191 | MS.gene63539:intron | 45.0% |
| ! | GATAATCTTCTGGTTGCTGG+AGG | - | chr3.3:5107626-5107645 | MS.gene63539:intron | 45.0% |
| ! | GCAGTGTTGAAGGGAAATCT+CGG | - | chr3.3:5109493-5109512 | MS.gene63539:intron | 45.0% |
| ! | GCATCACCAGAGAAAGGTAT+CGG | - | chr3.3:5105716-5105735 | MS.gene63539:CDS | 45.0% |
| !! | AAATCCGACAGGTTTTGTCC+TGG | + | chr3.3:5109444-5109463 | None:intergenic | 45.0% |
| !! | AACAGATGGTTTTGCCTCTC+TGG | + | chr3.3:5106012-5106031 | None:intergenic | 45.0% |
| !! | ACTTTGTTTGCTGTGGTGCT+TGG | - | chr3.3:5108179-5108198 | MS.gene63539:intron | 45.0% |
| !! | CAAAGCATTTCCGTTTTCCC+TGG | - | chr3.3:5108918-5108937 | MS.gene63539:intron | 45.0% |
| !! | GAGAAAGGTATCGGCAAACT+AGG | - | chr3.3:5105725-5105744 | MS.gene63539:CDS | 45.0% |
| !! | ATAAAAAAAAAAAAAAAAGA+GGG | + | chr3.3:5107215-5107234 | None:intergenic | 5.0% |
| !! | TTATTTATTATTTACATATT+TGG | - | chr3.3:5106555-5106574 | MS.gene63539:intron | 5.0% |
| !!! | TATTTTGATATTTTTAATAA+TGG | - | chr3.3:5108773-5108792 | MS.gene63539:intron | 5.0% |
| AACCCCTCCAATAGACTTCC+AGG | + | chr3.3:5107572-5107591 | None:intergenic | 50.0% | |
| AAGACATCCAGGGGATTCCT+TGG | - | chr3.3:5105683-5105702 | MS.gene63539:CDS | 50.0% | |
| AAGGAATCTGCGTACCAGAG+AGG | - | chr3.3:5105995-5106014 | MS.gene63539:intron | 50.0% | |
| ACAGCTGCTCAAGCAAGAAG+AGG | - | chr3.3:5105658-5105677 | MS.gene63539:CDS | 50.0% | |
| ACTTGCCATCGGAAGAATGC+CGG | + | chr3.3:5109534-5109553 | None:intergenic | 50.0% | |
| AGAATGCCGGATTGAACGGA+TGG | + | chr3.3:5109521-5109540 | None:intergenic | 50.0% | |
| AGACATCCAGGGGATTCCTT+GGG | - | chr3.3:5105684-5105703 | MS.gene63539:CDS | 50.0% | |
| AGACTCACATTCACTGGCCA+GGG | + | chr3.3:5108938-5108957 | None:intergenic | 50.0% | |
| ATCTCCTGGCGTAGTGGTTA+AGG | + | chr3.3:5106344-5106363 | None:intergenic | 50.0% | |
| CAAACAAAGTGAAGTGGGGG+TGG | + | chr3.3:5108169-5108188 | None:intergenic | 50.0% | |
| CAATCCTTAACCACTACGCC+AGG | - | chr3.3:5106337-5106356 | MS.gene63539:intron | 50.0% | |
| CACAGTTCTCAGTGACACAC+TGG | - | chr3.3:5107294-5107313 | MS.gene63539:intron | 50.0% | |
| CATTCACTGGCCAGGGAAAA+CGG | + | chr3.3:5108931-5108950 | None:intergenic | 50.0% | |
| CGGAAGAATGCCGGATTGAA+CGG | + | chr3.3:5109525-5109544 | None:intergenic | 50.0% | |
| CTATGACATAGGGGTGGTCA+TGG | - | chr3.3:5106412-5106431 | MS.gene63539:CDS | 50.0% | |
| CTGGCGTAGTGGTTAAGGAT+TGG | + | chr3.3:5106339-5106358 | None:intergenic | 50.0% | |
| CTGGTTGCTGGAGGATTTCA+GGG | - | chr3.3:5107635-5107654 | MS.gene63539:intron | 50.0% | |
| CTTGAGCAAAAGCTGACACC+AGG | + | chr3.3:5108671-5108690 | None:intergenic | 50.0% | |
| GAACTGCACCACTACAAACC+AGG | + | chr3.3:5108835-5108854 | None:intergenic | 50.0% | |
| GAAGAGGACAAGACATCCAG+GGG | - | chr3.3:5105674-5105693 | MS.gene63539:CDS | 50.0% | |
| GATGGGGTAACCTTTGCTAC+TGG | - | chr3.3:5109415-5109434 | MS.gene63539:CDS | 50.0% | |
| GCACCACTACAAACCAGGAA+AGG | + | chr3.3:5108830-5108849 | None:intergenic | 50.0% | |
| GCATCATCATGGAATCCCGA+TGG | - | chr3.3:5109397-5109416 | MS.gene63539:CDS | 50.0% | |
| GCCAGTGAATGTGAGTCTCT+TGG | - | chr3.3:5108940-5108959 | MS.gene63539:intron | 50.0% | |
| GCCTTAGCATCACCAGAGAA+AGG | - | chr3.3:5105710-5105729 | MS.gene63539:CDS | 50.0% | |
| GCGAGGTGCAATACACTTGT+GGG | + | chr3.3:5106148-5106167 | None:intergenic | 50.0% | |
| GCGGATCTTGGTTATGACAG+GGG | + | chr3.3:5106440-5106459 | None:intergenic | 50.0% | |
| GCTATACATGTGTCCCCCAT+AGG | - | chr3.3:5108566-5108585 | MS.gene63539:intron | 50.0% | |
| GCTGTAGCCTGTATCTACTC+TGG | - | chr3.3:5106829-5106848 | MS.gene63539:intron | 50.0% | |
| GGCGGATCTTGGTTATGACA+GGG | + | chr3.3:5106441-5106460 | None:intergenic | 50.0% | |
| GGGAGCAAATGCAGAGACTT+AGG | + | chr3.3:5108000-5108019 | None:intergenic | 50.0% | |
| GTAGCAAAGGTTACCCCATC+GGG | + | chr3.3:5109415-5109434 | None:intergenic | 50.0% | |
| GTCCTGGTTTCCAGTAGCAA+AGG | + | chr3.3:5109428-5109447 | None:intergenic | 50.0% | |
| GTGATGCTAAGGCTATCCCA+AGG | + | chr3.3:5105703-5105722 | None:intergenic | 50.0% | |
| TCAATCCGGCATTCTTCCGA+TGG | - | chr3.3:5109526-5109545 | MS.gene63539:intron | 50.0% | |
| TCAGTGTGTGGTATGGGTTC+GGG | + | chr3.3:5106642-5106661 | None:intergenic | 50.0% | |
| TCTGGTTGCTGGAGGATTTC+AGG | - | chr3.3:5107634-5107653 | MS.gene63539:intron | 50.0% | |
| TGGGGTGGGAATAGATAACG+AGG | + | chr3.3:5109075-5109094 | None:intergenic | 50.0% | |
| TGTAAAAGAGGCTGGCGGTA+GGG | + | chr3.3:5108020-5108039 | None:intergenic | 50.0% | |
| TTAGACCTCGTGCTACGTGA+TGG | + | chr3.3:5107445-5107464 | None:intergenic | 50.0% | |
| TTGTAAAAGAGGCTGGCGGT+AGG | + | chr3.3:5108021-5108040 | None:intergenic | 50.0% | |
| ! | CAAGTCAGTGGCAGTGTTGA+AGG | - | chr3.3:5109483-5109502 | MS.gene63539:intron | 50.0% |
| ! | CTTCAACACTGCCACTGACT+TGG | + | chr3.3:5109485-5109504 | None:intergenic | 50.0% |
| ! | GGGGTTTGGGATCGTACTTA+TGG | - | chr3.3:5109691-5109710 | MS.gene63539:CDS | 50.0% |
| ! | TGGATGATGATGTGGCGTTG+AGG | - | chr3.3:5108115-5108134 | MS.gene63539:intron | 50.0% |
| ! | TGGCGGATCTTGGTTATGAC+AGG | + | chr3.3:5106442-5106461 | None:intergenic | 50.0% |
| !! | CTGGTGTCAGCTTTTGCTCA+AGG | - | chr3.3:5108669-5108688 | MS.gene63539:intron | 50.0% |
| AAGTGAAGTGGGGGTGGCAA+TGG | + | chr3.3:5108163-5108182 | None:intergenic | 55.0% | |
| AGCTGACACCAGGTCGATCT+AGG | + | chr3.3:5108661-5108680 | None:intergenic | 55.0% | |
| ATATCCCCCATTCAGGGGAC+AGG | - | chr3.3:5105773-5105792 | MS.gene63539:intron | 55.0% | |
| ATGCAGCACCTAGATCGACC+TGG | - | chr3.3:5108650-5108669 | MS.gene63539:intron | 55.0% | |
| CAAAGGAGTCACAGTGGGGT+GGG | + | chr3.3:5109089-5109108 | None:intergenic | 55.0% | |
| GAGACTCACATTCACTGGCC+AGG | + | chr3.3:5108939-5108958 | None:intergenic | 55.0% | |
| GGCGAGGTGCAATACACTTG+TGG | + | chr3.3:5106149-5106168 | None:intergenic | 55.0% | |
| GTGGTATGGGTTCGGGTATG+TGG | + | chr3.3:5106635-5106654 | None:intergenic | 55.0% | |
| TATTGCACCTCGCCGTACAC+CGG | - | chr3.3:5106155-5106174 | MS.gene63539:CDS | 55.0% | |
| TCGGAGCCATCCGTTCAATC+CGG | - | chr3.3:5109512-5109531 | MS.gene63539:intron | 55.0% | |
| TGGACACGTTGCACCATCAG+AGG | - | chr3.3:5107358-5107377 | MS.gene63539:intron | 55.0% | |
| ! | CCTGTCGGATTTGGGACATG+CGG | - | chr3.3:5109452-5109471 | MS.gene63539:intron | 55.0% |
| ! | CTCGCGGCACTTTTGCAGAT+TGG | - | chr3.3:5105955-5105974 | MS.gene63539:intron | 55.0% |
| ACCAAGATCCGCCATTGGGG+TGG | - | chr3.3:5106448-5106467 | MS.gene63539:intron | 60.0% | |
| AGCACTCGCTAACCGGTCCA+CGG | + | chr3.3:5105933-5105952 | None:intergenic | 60.0% | |
| CACCACCATCACGTAGCACG+AGG | - | chr3.3:5107437-5107456 | MS.gene63539:CDS | 60.0% | |
| CCCATTCAGGGGACAGGTCA+GGG | - | chr3.3:5105779-5105798 | MS.gene63539:intron | 60.0% | |
| CCCTGACCTGTCCCCTGAAT+GGG | + | chr3.3:5105782-5105801 | None:intergenic | 60.0% | |
| CCGCATGTCCCAAATCCGAC+AGG | + | chr3.3:5109455-5109474 | None:intergenic | 60.0% | |
| CCTGACCTGTCCCCTGAATG+GGG | + | chr3.3:5105781-5105800 | None:intergenic | 60.0% | |
| CTGACCTGTCCCCTGAATGG+GGG | + | chr3.3:5105780-5105799 | None:intergenic | 60.0% | |
| GACCTCGTGCTACGTGATGG+TGG | + | chr3.3:5107442-5107461 | None:intergenic | 60.0% | |
| GCAAAGGAGTCACAGTGGGG+TGG | + | chr3.3:5109090-5109109 | None:intergenic | 60.0% | |
| GGCGCAGGCCATATTCGAGA+AGG | + | chr3.3:5109720-5109739 | None:intergenic | 60.0% | |
| GGCTATCCCAAGGAATCCCC+TGG | + | chr3.3:5105693-5105712 | None:intergenic | 60.0% | |
| TCCCTGACCTGTCCCCTGAA+TGG | + | chr3.3:5105783-5105802 | None:intergenic | 60.0% | |
| TGAAGTGGGGGTGGCAATGG+AGG | + | chr3.3:5108160-5108179 | None:intergenic | 60.0% | |
| TGGGGGTGGCAATGGAGGAT+GGG | + | chr3.3:5108155-5108174 | None:intergenic | 60.0% | |
| TTCAGGGGACAGGTCAGGGA+AGG | - | chr3.3:5105783-5105802 | MS.gene63539:intron | 60.0% | |
| !! | ACCACCCCAATGGCGGATCT+TGG | + | chr3.3:5106452-5106471 | None:intergenic | 60.0% |
| !! | CTCGTGCTACGTGATGGTGG+TGG | + | chr3.3:5107439-5107458 | None:intergenic | 60.0% |
| CAAAGCTCCGGTGTACGGCG+AGG | + | chr3.3:5106165-5106184 | None:intergenic | 65.0% | |
| CCCCATTCAGGGGACAGGTC+AGG | - | chr3.3:5105778-5105797 | MS.gene63539:intron | 65.0% | |
| GCGAGCCAGCACTCGCTAAC+CGG | + | chr3.3:5105940-5105959 | None:intergenic | 65.0% | |
| GTGGACCGGTTAGCGAGTGC+TGG | - | chr3.3:5105932-5105951 | MS.gene63539:intron | 65.0% | |
| GTGGGGGTGGCAATGGAGGA+TGG | + | chr3.3:5108156-5108175 | None:intergenic | 65.0% | |
| !! | GGTTAGCGAGTGCTGGCTCG+CGG | - | chr3.3:5105939-5105958 | MS.gene63539:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 5105331 | 5109771 | 5105331 | ID=MS.gene63539 |
| chr3.3 | mRNA | 5105331 | 5109771 | 5105331 | ID=MS.gene63539.t1;Parent=MS.gene63539 |
| chr3.3 | exon | 5109625 | 5109771 | 5109625 | ID=MS.gene63539.t1.exon1;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5109625 | 5109771 | 5109625 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5109298 | 5109465 | 5109298 | ID=MS.gene63539.t1.exon2;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5109298 | 5109465 | 5109298 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5108278 | 5108364 | 5108278 | ID=MS.gene63539.t1.exon3;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5108278 | 5108364 | 5108278 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5107723 | 5107857 | 5107723 | ID=MS.gene63539.t1.exon4;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5107723 | 5107857 | 5107723 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5107429 | 5107539 | 5107429 | ID=MS.gene63539.t1.exon5;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5107429 | 5107539 | 5107429 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5106355 | 5106446 | 5106355 | ID=MS.gene63539.t1.exon6;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5106355 | 5106446 | 5106355 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5106153 | 5106258 | 5106153 | ID=MS.gene63539.t1.exon7;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5106153 | 5106258 | 5106153 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5105861 | 5105947 | 5105861 | ID=MS.gene63539.t1.exon8;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5105861 | 5105947 | 5105861 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| chr3.3 | exon | 5105331 | 5105744 | 5105331 | ID=MS.gene63539.t1.exon9;Parent=MS.gene63539.t1 |
| chr3.3 | CDS | 5105331 | 5105744 | 5105331 | ID=cds.MS.gene63539.t1;Parent=MS.gene63539.t1 |
| Gene Sequence |
| Protein sequence |
