Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069110.t1 | XP_003613046.1 | 97.1 | 173 | 5 | 0 | 1 | 173 | 1 | 173 | 1.10E-91 | 345.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069110.t1 | G7JWE3 | 97.1 | 173 | 5 | 0 | 1 | 173 | 1 | 173 | 7.8e-92 | 345.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene069110 | 0.832512 | 9.06E-56 | -1.69E-46 |
| MS.gene049283 | MS.gene069110 | 0.83052 | 2.80E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene069110 | 0.817751 | 2.80E-52 | -1.69E-46 |
| MS.gene049419 | MS.gene069110 | -0.812829 | 3.48E-51 | -1.69E-46 |
| MS.gene049801 | MS.gene069110 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene04991 | MS.gene069110 | -0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene069110 | 0.831913 | 1.27E-55 | -1.69E-46 |
| MS.gene050105 | MS.gene069110 | 0.873031 | 2.01E-67 | -1.69E-46 |
| MS.gene050605 | MS.gene069110 | 0.801551 | 8.54E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene069110 | -0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene069110 | 0.844808 | 6.01E-59 | -1.69E-46 |
| MS.gene050762 | MS.gene069110 | 0.804013 | 2.65E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene069110 | 0.805045 | 1.61E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene069110 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene069110 | 0.812613 | 3.88E-51 | -1.69E-46 |
| MS.gene051122 | MS.gene069110 | 0.886118 | 4.52E-72 | -1.69E-46 |
| MS.gene051368 | MS.gene069110 | 0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene069110 | 0.80267 | 5.03E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene069110 | 0.829883 | 4.01E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene069110 | 0.805649 | 1.21E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene069110 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene052675 | MS.gene069110 | 0.824796 | 6.65E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene069110 | 0.830798 | 2.40E-55 | -1.69E-46 |
| MS.gene052954 | MS.gene069110 | 0.845791 | 3.26E-59 | -1.69E-46 |
| MS.gene053456 | MS.gene069110 | 0.807996 | 3.85E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene069110 | 0.815395 | 9.45E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene069110 | 0.867901 | 9.72E-66 | -1.69E-46 |
| MS.gene055063 | MS.gene069110 | -0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene055701 | MS.gene069110 | 0.833895 | 4.10E-56 | -1.69E-46 |
| MS.gene055864 | MS.gene069110 | 0.807877 | 4.08E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene069110 | 0.834489 | 2.91E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene069110 | 0.815045 | 1.13E-51 | -1.69E-46 |
| MS.gene056480 | MS.gene069110 | 0.844795 | 6.06E-59 | -1.69E-46 |
| MS.gene056506 | MS.gene069110 | 0.816384 | 5.69E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene069110 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene069110 | 0.809363 | 1.96E-50 | -1.69E-46 |
| MS.gene056849 | MS.gene069110 | 0.834026 | 3.80E-56 | -1.69E-46 |
| MS.gene05761 | MS.gene069110 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene058081 | MS.gene069110 | 0.826326 | 2.88E-54 | -1.69E-46 |
| MS.gene058223 | MS.gene069110 | -0.842517 | 2.46E-58 | -1.69E-46 |
| MS.gene058399 | MS.gene069110 | 0.802326 | 5.92E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene069110 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene069110 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene059952 | MS.gene069110 | 0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene069110 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene060084 | MS.gene069110 | 0.801926 | 7.15E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene069110 | 0.820349 | 7.19E-53 | -1.69E-46 |
| MS.gene060297 | MS.gene069110 | 0.807024 | 6.19E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene069110 | 0.811831 | 5.75E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene069110 | 0.80485 | 1.77E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene069110 | 0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene069110 | 0.80109 | 1.06E-48 | -1.69E-46 |
| MS.gene060840 | MS.gene069110 | 0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene060850 | MS.gene069110 | 0.830766 | 2.44E-55 | -1.69E-46 |
| MS.gene060851 | MS.gene069110 | 0.858952 | 5.78E-63 | -1.69E-46 |
| MS.gene060852 | MS.gene069110 | 0.858705 | 6.86E-63 | -1.69E-46 |
| MS.gene060932 | MS.gene069110 | 0.81398 | 1.94E-51 | -1.69E-46 |
| MS.gene06121 | MS.gene069110 | 0.841246 | 5.34E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069110.t1 | MTR_5g032070 | 97.110 | 173 | 5 | 0 | 1 | 173 | 1 | 173 | 2.98e-122 | 342 |
| MS.gene069110.t1 | MTR_8g471140 | 59.116 | 181 | 57 | 7 | 3 | 173 | 1 | 174 | 1.64e-48 | 155 |
| MS.gene069110.t1 | MTR_5g066330 | 50.568 | 176 | 73 | 8 | 1 | 169 | 1 | 169 | 1.71e-45 | 147 |
| MS.gene069110.t1 | MTR_8g471140 | 57.317 | 164 | 53 | 7 | 3 | 156 | 1 | 157 | 4.18e-38 | 128 |
| MS.gene069110.t1 | MTR_3g100200 | 38.983 | 177 | 94 | 6 | 1 | 169 | 1 | 171 | 5.55e-26 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069110.t1 | AT4G38060 | 44.118 | 136 | 57 | 4 | 36 | 171 | 20 | 136 | 1.76e-25 | 95.5 |
| MS.gene069110.t1 | AT4G38060 | 44.118 | 136 | 57 | 4 | 36 | 171 | 20 | 136 | 1.76e-25 | 95.5 |
| MS.gene069110.t1 | AT4G38060 | 44.118 | 136 | 57 | 4 | 36 | 171 | 20 | 136 | 1.76e-25 | 95.5 |
| MS.gene069110.t1 | AT4G38060 | 40.323 | 124 | 55 | 4 | 36 | 159 | 20 | 124 | 3.96e-17 | 73.6 |
| MS.gene069110.t1 | AT5G65480 | 42.222 | 90 | 33 | 5 | 83 | 168 | 76 | 150 | 7.34e-12 | 60.5 |
Find 34 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGACACGTTTGTCTTGT+TGG | 0.293279 | 5.4:-22217181 | MS.gene069110:CDS |
| GAGAAAGAGCCTATTGTTAA+TGG | 0.294492 | 5.4:-22217140 | MS.gene069110:CDS |
| GATGACTCAGATTGGTCTAT+TGG | 0.319310 | 5.4:-22216921 | MS.gene069110:CDS |
| TTGGTTATGGAGAGGTAGTA+AGG | 0.362202 | 5.4:-22217162 | MS.gene069110:CDS |
| CACGTTTGTCTTGTTGGTTA+TGG | 0.369107 | 5.4:-22217175 | MS.gene069110:CDS |
| GATGGATTTCCATTAACAAT+AGG | 0.374602 | 5.4:+22217131 | None:intergenic |
| CAAATAATCAAAGGAAGGTT+AGG | 0.383783 | 5.4:-22217046 | MS.gene069110:CDS |
| GGTGGTGGTGGTTGTTTGTC+AGG | 0.396455 | 5.4:-22216954 | MS.gene069110:CDS |
| TTACCAGAAGAAAATTCATT+TGG | 0.409882 | 5.4:+22216744 | None:intergenic |
| TTAGGAAGAAGTGGCAGAGT+AGG | 0.411049 | 5.4:-22217028 | MS.gene069110:CDS |
| ATGACTCAGATTGGTCTATT+GGG | 0.420028 | 5.4:-22216920 | MS.gene069110:CDS |
| TTTGAAGTTTCCTTTGATGA+AGG | 0.436540 | 5.4:-22217072 | MS.gene069110:CDS |
| TAGGAAGAAGTGGCAGAGTA+GGG | 0.441023 | 5.4:-22217027 | MS.gene069110:CDS |
| CCTTCAACTTCCTTGCAACC+TGG | 0.459031 | 5.4:+22216807 | None:intergenic |
| AGTGGCAGAGTAGGGAAGAG+AGG | 0.465355 | 5.4:-22217019 | MS.gene069110:CDS |
| ATGGAAATCCATCTTCTGAA+TGG | 0.490855 | 5.4:-22217121 | MS.gene069110:CDS |
| CCAGGTTGCAAGGAAGTTGA+AGG | 0.512670 | 5.4:-22216807 | MS.gene069110:CDS |
| GTATCATCTGATGGTGGTGG+TGG | 0.523059 | 5.4:-22216966 | MS.gene069110:CDS |
| TTGGTTCCTTGTTATAGACC+AGG | 0.523146 | 5.4:-22216825 | MS.gene069110:CDS |
| CTGAATCTGATGACTCAGAT+TGG | 0.527691 | 5.4:-22216929 | MS.gene069110:CDS |
| TTGAAGTTTCCTTTGATGAA+GGG | 0.535589 | 5.4:-22217071 | MS.gene069110:CDS |
| TGCAGCTGGAAACAATTACA+TGG | 0.536763 | 5.4:-22215487 | MS.gene069110:intron |
| ATTGGGTGGTTAGAGCCTCA+TGG | 0.551380 | 5.4:-22216903 | MS.gene069110:CDS |
| TTATTTGTTCCCTTCATCAA+AGG | 0.553314 | 5.4:+22217062 | None:intergenic |
| AAAGGAAGGTTAGGAAGAAG+TGG | 0.568851 | 5.4:-22217037 | MS.gene069110:CDS |
| TTAGTATCATCTGATGGTGG+TGG | 0.573261 | 5.4:-22216969 | MS.gene069110:CDS |
| TTGTTATAGACCAGGTTGCA+AGG | 0.574059 | 5.4:-22216817 | MS.gene069110:CDS |
| GGGAACAAATAATCAAAGGA+AGG | 0.591584 | 5.4:-22217051 | MS.gene069110:CDS |
| GAAACAATTACATGGAACAA+TGG | 0.593678 | 5.4:-22215479 | MS.gene069110:CDS |
| TGAAGGGAACAAATAATCAA+AGG | 0.593937 | 5.4:-22217055 | MS.gene069110:CDS |
| TTGTCTTGTTGGTTATGGAG+AGG | 0.611884 | 5.4:-22217170 | MS.gene069110:CDS |
| ACTCAGATTGGTCTATTGGG+TGG | 0.613034 | 5.4:-22216917 | MS.gene069110:CDS |
| TTGCAACCTGGTCTATAACA+AGG | 0.667827 | 5.4:+22216819 | None:intergenic |
| CTCTGAAAATCAGAACCATG+AGG | 0.713992 | 5.4:+22216888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGTTTTTTTTTATTCT+TGG | - | chr5.4:22216196-22216215 | MS.gene069110:intron | 10.0% |
| !! | AATAGATATAAAAGATAAAC+TGG | - | chr5.4:22216733-22216752 | MS.gene069110:intron | 15.0% |
| !!! | ATATCTATTTCTTATTTTGA+AGG | + | chr5.4:22216722-22216741 | None:intergenic | 15.0% |
| !!! | TATCTATTTCTTATTTTGAA+GGG | + | chr5.4:22216721-22216740 | None:intergenic | 15.0% |
| !!! | TCATATTTCTTTGTATATTT+TGG | - | chr5.4:22216477-22216496 | MS.gene069110:intron | 15.0% |
| !! | ATCATTTCTCAACAATATAA+TGG | + | chr5.4:22216360-22216379 | None:intergenic | 20.0% |
| !! | CTTTGTACAAATCAAAATTA+GGG | - | chr5.4:22217008-22217027 | MS.gene069110:CDS | 20.0% |
| !! | TCATTTCTCAACAATATAAT+GGG | + | chr5.4:22216359-22216378 | None:intergenic | 20.0% |
| !! | TCTTTGTACAAATCAAAATT+AGG | - | chr5.4:22217007-22217026 | MS.gene069110:CDS | 20.0% |
| !!! | AACTGTTTTTTTCTTGTTTA+TGG | - | chr5.4:22216827-22216846 | MS.gene069110:CDS | 20.0% |
| !!! | ATTTTGCTATATTTGTAGTT+TGG | - | chr5.4:22216088-22216107 | MS.gene069110:intron | 20.0% |
| ! | AACAAACAGCTCAATTAAAA+TGG | + | chr5.4:22216988-22217007 | None:intergenic | 25.0% |
| ! | AAGATCTATTAATACTACTC+AGG | + | chr5.4:22216676-22216695 | None:intergenic | 25.0% |
| ! | AATGTTGAATATAAGCTCTT+TGG | - | chr5.4:22216625-22216644 | MS.gene069110:intron | 25.0% |
| ! | ATTTCTCAACAATATAATGG+GGG | + | chr5.4:22216357-22216376 | None:intergenic | 25.0% |
| ! | CAAATTAAGTTCAATTCTCT+TGG | + | chr5.4:22216928-22216947 | None:intergenic | 25.0% |
| ! | CATTTCTCAACAATATAATG+GGG | + | chr5.4:22216358-22216377 | None:intergenic | 25.0% |
| ! | TAATCCAAAAACAATAAGCA+TGG | + | chr5.4:22217122-22217141 | None:intergenic | 25.0% |
| ! | TCCATCATATAAGATGATTT+AGG | + | chr5.4:22216905-22216924 | None:intergenic | 25.0% |
| ! | TCCCCTAAAAAAAAAATCTT+TGG | - | chr5.4:22216650-22216669 | MS.gene069110:intron | 25.0% |
| ! | TGAATGTATCAAATTAGTAC+AGG | + | chr5.4:22217079-22217098 | None:intergenic | 25.0% |
| ! | TTACCAGAAGAAAATTCATT+TGG | + | chr5.4:22215899-22215918 | None:intergenic | 25.0% |
| !! | AATTTTCTTCTGGTAAGATT+TGG | - | chr5.4:22215903-22215922 | MS.gene069110:intron | 25.0% |
| !! | AGTGGTAATGTAATTAATGA+TGG | - | chr5.4:22217033-22217052 | MS.gene069110:CDS | 25.0% |
| !! | TTTGTCATGTATTATGCTTT+TGG | + | chr5.4:22216166-22216185 | None:intergenic | 25.0% |
| !!! | AAAGATTTTTTTTTTAGGGG+AGG | + | chr5.4:22216651-22216670 | None:intergenic | 25.0% |
| !!! | AGGCCAAAGATTTTTTTTTT+AGG | + | chr5.4:22216656-22216675 | None:intergenic | 25.0% |
| !!! | GCCAAAGATTTTTTTTTTAG+GGG | + | chr5.4:22216654-22216673 | None:intergenic | 25.0% |
| !!! | GGCCAAAGATTTTTTTTTTA+GGG | + | chr5.4:22216655-22216674 | None:intergenic | 25.0% |
| AAAACAATAAGCATGGATAC+AGG | + | chr5.4:22217115-22217134 | None:intergenic | 30.0% | |
| ATATACTTCAAACTGCAAGT+TGG | - | chr5.4:22216956-22216975 | MS.gene069110:CDS | 30.0% | |
| CAAATAATCAAAGGAAGGTT+AGG | - | chr5.4:22215594-22215613 | MS.gene069110:intron | 30.0% | |
| CAAATCAAAATTAGGGAAAG+TGG | - | chr5.4:22217015-22217034 | MS.gene069110:CDS | 30.0% | |
| GAAACAATTACATGGAACAA+TGG | - | chr5.4:22217161-22217180 | MS.gene069110:CDS | 30.0% | |
| GCCTAAATCATCTTATATGA+TGG | - | chr5.4:22216901-22216920 | MS.gene069110:CDS | 30.0% | |
| GTATAAGTATCTGTGCAAAT+TGG | + | chr5.4:22216573-22216592 | None:intergenic | 30.0% | |
| TACAGGAAATAGAGTTAAGA+GGG | + | chr5.4:22217062-22217081 | None:intergenic | 30.0% | |
| TATACTTCAAACTGCAAGTT+GGG | - | chr5.4:22216957-22216976 | MS.gene069110:CDS | 30.0% | |
| TGAAGGGAACAAATAATCAA+AGG | - | chr5.4:22215585-22215604 | MS.gene069110:intron | 30.0% | |
| TTATTTGTTCCCTTCATCAA+AGG | + | chr5.4:22215581-22215600 | None:intergenic | 30.0% | |
| TTCAAATGCATCAATCTACT+AGG | - | chr5.4:22216226-22216245 | MS.gene069110:intron | 30.0% | |
| TTGAAGTTTCCTTTGATGAA+GGG | - | chr5.4:22215569-22215588 | MS.gene069110:intron | 30.0% | |
| ! | CTACCAAATGAATTTTCTTC+TGG | - | chr5.4:22215893-22215912 | MS.gene069110:intron | 30.0% |
| ! | GATGGATTTCCATTAACAAT+AGG | + | chr5.4:22215512-22215531 | None:intergenic | 30.0% |
| ! | GTATCCATGCTTATTGTTTT+TGG | - | chr5.4:22217115-22217134 | MS.gene069110:CDS | 30.0% |
| ! | TTTGAAGTTTCCTTTGATGA+AGG | - | chr5.4:22215568-22215587 | MS.gene069110:intron | 30.0% |
| !! | TCTACTAGGTTTTTGTTTCA+TGG | - | chr5.4:22216240-22216259 | MS.gene069110:intron | 30.0% |
| !!! | GTTGTTTTAGTATCATCTGA+TGG | - | chr5.4:22215665-22215684 | MS.gene069110:intron | 30.0% |
| !!! | TGATAGTAGTTTTGCTGTTT+TGG | - | chr5.4:22215796-22215815 | MS.gene069110:intron | 30.0% |
| !!! | TTCTAGTCTTGTGTGTTTTT+TGG | - | chr5.4:22216331-22216350 | MS.gene069110:intron | 30.0% |
| ACTTACTCTCTCTATTGCTT+TGG | - | chr5.4:22216439-22216458 | MS.gene069110:intron | 35.0% | |
| ATGGAAATCCATCTTCTGAA+TGG | - | chr5.4:22215519-22215538 | MS.gene069110:intron | 35.0% | |
| CTGTAAGTGCAATGATGATT+AGG | - | chr5.4:22216122-22216141 | MS.gene069110:intron | 35.0% | |
| GAAAAACTCCATTCAGAAGA+TGG | + | chr5.4:22215530-22215549 | None:intergenic | 35.0% | |
| GAGAAAGAGCCTATTGTTAA+TGG | - | chr5.4:22215500-22215519 | MS.gene069110:intron | 35.0% | |
| GGGAACAAATAATCAAAGGA+AGG | - | chr5.4:22215589-22215608 | MS.gene069110:intron | 35.0% | |
| GTACAGGAAATAGAGTTAAG+AGG | + | chr5.4:22217063-22217082 | None:intergenic | 35.0% | |
| GTGTCTGTCATTATCATCAT+GGG | - | chr5.4:22216052-22216071 | MS.gene069110:intron | 35.0% | |
| TGAAACTGTGGATACTATAG+AGG | - | chr5.4:22216301-22216320 | MS.gene069110:intron | 35.0% | |
| TGACAACACTAACAACATAG+AGG | + | chr5.4:22216547-22216566 | None:intergenic | 35.0% | |
| TGTAACTATGCATGAAACTG+TGG | - | chr5.4:22216289-22216308 | MS.gene069110:intron | 35.0% | |
| TGTGTCTGTCATTATCATCA+TGG | - | chr5.4:22216051-22216070 | MS.gene069110:intron | 35.0% | |
| TTGCACAGATACTTATACTC+TGG | - | chr5.4:22216575-22216594 | MS.gene069110:intron | 35.0% | |
| TTTGAAGGGAACAAATTGCA+GGG | + | chr5.4:22216707-22216726 | None:intergenic | 35.0% | |
| TTTGGATTTAGCTACCCAAA+AGG | + | chr5.4:22216148-22216167 | None:intergenic | 35.0% | |
| ! | CAATGATGATTAGGCCTTTT+GGG | - | chr5.4:22216131-22216150 | MS.gene069110:intron | 35.0% |
| ! | CATTTTTGTTCACAGCTTGT+GGG | + | chr5.4:22216507-22216526 | None:intergenic | 35.0% |
| ! | TTACTGATTGAATTTGCAGC+TGG | - | chr5.4:22217139-22217158 | MS.gene069110:CDS | 35.0% |
| !! | ATGACTCAGATTGGTCTATT+GGG | - | chr5.4:22215720-22215739 | MS.gene069110:intron | 35.0% |
| !! | GTTTTAGTATCATCTGATGG+TGG | - | chr5.4:22215668-22215687 | MS.gene069110:intron | 35.0% |
| !! | TTTTGAAGGGAACAAATTGC+AGG | + | chr5.4:22216708-22216727 | None:intergenic | 35.0% |
| AAAGGAAGGTTAGGAAGAAG+TGG | - | chr5.4:22215603-22215622 | MS.gene069110:intron | 40.0% | |
| CCACAAGCTGTGAACAAAAA+TGG | - | chr5.4:22216505-22216524 | MS.gene069110:intron | 40.0% | |
| CTGAATCTGATGACTCAGAT+TGG | - | chr5.4:22215711-22215730 | MS.gene069110:intron | 40.0% | |
| CTTTGACACGTTTGTCTTGT+TGG | - | chr5.4:22215459-22215478 | MS.gene069110:CDS | 40.0% | |
| GACACACACATTTCTTCATC+AGG | + | chr5.4:22216037-22216056 | None:intergenic | 40.0% | |
| TGCAGCTGGAAACAATTACA+TGG | - | chr5.4:22217153-22217172 | MS.gene069110:CDS | 40.0% | |
| TTGCAACCTGGTCTATAACA+AGG | + | chr5.4:22215824-22215843 | None:intergenic | 40.0% | |
| TTGGTTATGGAGAGGTAGTA+AGG | - | chr5.4:22215478-22215497 | MS.gene069110:CDS | 40.0% | |
| TTGTTATAGACCAGGTTGCA+AGG | - | chr5.4:22215823-22215842 | MS.gene069110:intron | 40.0% | |
| ! | CACGTTTGTCTTGTTGGTTA+TGG | - | chr5.4:22215465-22215484 | MS.gene069110:CDS | 40.0% |
| ! | CTCTGAAAATCAGAACCATG+AGG | + | chr5.4:22215755-22215774 | None:intergenic | 40.0% |
| ! | GCAATGATGATTAGGCCTTT+TGG | - | chr5.4:22216130-22216149 | MS.gene069110:intron | 40.0% |
| ! | TTGGTTCCTTGTTATAGACC+AGG | - | chr5.4:22215815-22215834 | MS.gene069110:intron | 40.0% |
| ! | TTGTCTTGTTGGTTATGGAG+AGG | - | chr5.4:22215470-22215489 | MS.gene069110:CDS | 40.0% |
| !! | CCATTTTTGTTCACAGCTTG+TGG | + | chr5.4:22216508-22216527 | None:intergenic | 40.0% |
| !! | GATGACTCAGATTGGTCTAT+TGG | - | chr5.4:22215719-22215738 | MS.gene069110:intron | 40.0% |
| !! | TTAGTATCATCTGATGGTGG+TGG | - | chr5.4:22215671-22215690 | MS.gene069110:intron | 40.0% |
| TAGGAAGAAGTGGCAGAGTA+GGG | - | chr5.4:22215613-22215632 | MS.gene069110:intron | 45.0% | |
| TTAGGAAGAAGTGGCAGAGT+AGG | - | chr5.4:22215612-22215631 | MS.gene069110:intron | 45.0% | |
| !! | ACTCAGATTGGTCTATTGGG+TGG | - | chr5.4:22215723-22215742 | MS.gene069110:intron | 45.0% |
| ATTGGGTGGTTAGAGCCTCA+TGG | - | chr5.4:22215737-22215756 | MS.gene069110:intron | 50.0% | |
| CCAGGTTGCAAGGAAGTTGA+AGG | - | chr5.4:22215833-22215852 | MS.gene069110:intron | 50.0% | |
| CCTTCAACTTCCTTGCAACC+TGG | + | chr5.4:22215836-22215855 | None:intergenic | 50.0% | |
| !! | GTATCATCTGATGGTGGTGG+TGG | - | chr5.4:22215674-22215693 | MS.gene069110:intron | 50.0% |
| AGTGGCAGAGTAGGGAAGAG+AGG | - | chr5.4:22215621-22215640 | MS.gene069110:intron | 55.0% | |
| !! | GGTGGTGGTGGTTGTTTGTC+AGG | - | chr5.4:22215686-22215705 | MS.gene069110:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 22215449 | 22217213 | 22215449 | ID=MS.gene069110 |
| chr5.4 | mRNA | 22215449 | 22217213 | 22215449 | ID=MS.gene069110.t1;Parent=MS.gene069110 |
| chr5.4 | exon | 22216748 | 22217213 | 22216748 | ID=MS.gene069110.t1.exon1;Parent=MS.gene069110.t1 |
| chr5.4 | CDS | 22216748 | 22217213 | 22216748 | ID=cds.MS.gene069110.t1;Parent=MS.gene069110.t1 |
| chr5.4 | exon | 22215449 | 22215504 | 22215449 | ID=MS.gene069110.t1.exon2;Parent=MS.gene069110.t1 |
| chr5.4 | CDS | 22215449 | 22215504 | 22215449 | ID=cds.MS.gene069110.t1;Parent=MS.gene069110.t1 |
| Gene Sequence |
| Protein sequence |
