Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56285.t1 | XP_024635317.1 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 3.10E-247 | 864 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56285.t1 | Q9Y7K5 | 29.0 | 383 | 245 | 10 | 66 | 444 | 66 | 425 | 2.5e-32 | 141.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56285.t1 | G7J0E2 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 2.2e-247 | 864.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene56285 | 0.855074 | 8.05E-62 | -1.69E-46 |
| MS.gene049378 | MS.gene56285 | 0.833018 | 6.79E-56 | -1.69E-46 |
| MS.gene049419 | MS.gene56285 | -0.874226 | 7.97E-68 | -1.69E-46 |
| MS.gene049669 | MS.gene56285 | 0.812007 | 5.27E-51 | -1.69E-46 |
| MS.gene04991 | MS.gene56285 | -0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene049951 | MS.gene56285 | 0.801 | 1.11E-48 | -1.69E-46 |
| MS.gene050105 | MS.gene56285 | 0.889384 | 2.54E-73 | -1.69E-46 |
| MS.gene050312 | MS.gene56285 | 0.803874 | 2.83E-49 | -1.69E-46 |
| MS.gene050508 | MS.gene56285 | 0.837457 | 5.14E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene56285 | 0.83998 | 1.15E-57 | -1.69E-46 |
| MS.gene051122 | MS.gene56285 | 0.870137 | 1.83E-66 | -1.69E-46 |
| MS.gene051368 | MS.gene56285 | 0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene56285 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene56285 | 0.850967 | 1.21E-60 | -1.69E-46 |
| MS.gene052389 | MS.gene56285 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene052502 | MS.gene56285 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene56285 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene56285 | 0.801545 | 8.56E-49 | -1.69E-46 |
| MS.gene052824 | MS.gene56285 | 0.801251 | 9.83E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene56285 | 0.839316 | 1.70E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene56285 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene053188 | MS.gene56285 | 0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene56285 | 0.831933 | 1.26E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene56285 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene56285 | 0.832038 | 1.19E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene56285 | 0.865234 | 6.84E-65 | -1.69E-46 |
| MS.gene05469 | MS.gene56285 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene56285 | -0.811239 | 7.73E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene56285 | 0.803399 | 3.55E-49 | -1.69E-46 |
| MS.gene055225 | MS.gene56285 | 0.836901 | 7.13E-57 | -1.69E-46 |
| MS.gene055230 | MS.gene56285 | 0.805224 | 1.48E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene56285 | 0.865367 | 6.22E-65 | -1.69E-46 |
| MS.gene056064 | MS.gene56285 | 0.828836 | 7.20E-55 | -1.69E-46 |
| MS.gene056849 | MS.gene56285 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene56285 | 0.817515 | 3.17E-52 | -1.69E-46 |
| MS.gene057156 | MS.gene56285 | -0.842748 | 2.14E-58 | -1.69E-46 |
| MS.gene05761 | MS.gene56285 | 0.809432 | 1.90E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene56285 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene56285 | 0.813648 | 2.30E-51 | -1.69E-46 |
| MS.gene058223 | MS.gene56285 | -0.834002 | 3.85E-56 | -1.69E-46 |
| MS.gene058498 | MS.gene56285 | 0.829818 | 4.16E-55 | -1.69E-46 |
| MS.gene058500 | MS.gene56285 | 0.824708 | 6.97E-54 | -1.69E-46 |
| MS.gene059710 | MS.gene56285 | 0.859172 | 4.97E-63 | -1.69E-46 |
| MS.gene059830 | MS.gene56285 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene059952 | MS.gene56285 | 0.845075 | 5.09E-59 | -1.69E-46 |
| MS.gene060297 | MS.gene56285 | 0.834085 | 3.67E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene56285 | 0.811588 | 6.50E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene56285 | 0.834469 | 2.94E-56 | -1.69E-46 |
| MS.gene060852 | MS.gene56285 | 0.833816 | 4.29E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene56285 | 0.83518 | 1.95E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52355 | MS.gene56285 | PPI |
| MS.gene30433 | MS.gene56285 | PPI |
| MS.gene56285 | MS.gene022502 | PPI |
| MS.gene56285 | MS.gene23196 | PPI |
| MS.gene26532 | MS.gene56285 | PPI |
| MS.gene47479 | MS.gene56285 | PPI |
| MS.gene008767 | MS.gene56285 | PPI |
| MS.gene56285 | MS.gene043662 | PPI |
| MS.gene35613 | MS.gene56285 | PPI |
| MS.gene56285 | MS.gene39623 | PPI |
| MS.gene56285 | MS.gene02469 | PPI |
| MS.gene56285 | MS.gene29842 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56285.t1 | MTR_3g010010 | 99.107 | 448 | 3 | 1 | 1 | 448 | 1 | 447 | 0.0 | 920 |
| MS.gene56285.t1 | MTR_3g010010 | 99.107 | 448 | 3 | 1 | 1 | 448 | 43 | 489 | 0.0 | 920 |
| MS.gene56285.t1 | MTR_2g028050 | 73.602 | 447 | 118 | 0 | 1 | 447 | 1 | 447 | 0.0 | 685 |
| MS.gene56285.t1 | MTR_7g022190 | 66.019 | 412 | 139 | 1 | 35 | 446 | 28 | 438 | 0.0 | 596 |
| MS.gene56285.t1 | MTR_3g074070 | 58.250 | 400 | 166 | 1 | 49 | 448 | 59 | 457 | 1.64e-178 | 507 |
| MS.gene56285.t1 | MTR_3g074070 | 58.105 | 401 | 166 | 2 | 49 | 448 | 59 | 458 | 2.59e-177 | 504 |
| MS.gene56285.t1 | MTR_3g074070 | 58.396 | 399 | 165 | 1 | 50 | 448 | 88 | 485 | 2.75e-177 | 505 |
| MS.gene56285.t1 | MTR_3g010110 | 75.490 | 306 | 51 | 3 | 1 | 305 | 1 | 283 | 6.12e-160 | 453 |
| MS.gene56285.t1 | MTR_3g074070 | 59.621 | 317 | 127 | 1 | 132 | 448 | 28 | 343 | 8.51e-144 | 414 |
| MS.gene56285.t1 | MTR_3g074070 | 58.194 | 299 | 124 | 1 | 150 | 448 | 1 | 298 | 2.24e-131 | 381 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56285.t1 | AT1G55680 | 77.162 | 451 | 94 | 2 | 1 | 448 | 1 | 445 | 0.0 | 717 |
| MS.gene56285.t1 | AT3G13340 | 80.583 | 412 | 80 | 0 | 37 | 448 | 36 | 447 | 0.0 | 712 |
| MS.gene56285.t1 | AT3G13340 | 80.583 | 412 | 80 | 0 | 37 | 448 | 36 | 447 | 0.0 | 712 |
| MS.gene56285.t1 | AT3G13340 | 80.583 | 412 | 80 | 0 | 37 | 448 | 36 | 447 | 0.0 | 712 |
| MS.gene56285.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene56285.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene56285.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene56285.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene56285.t1 | AT5G56190 | 73.696 | 441 | 109 | 3 | 10 | 448 | 6 | 441 | 0.0 | 698 |
| MS.gene56285.t1 | AT5G56190 | 73.696 | 441 | 109 | 3 | 10 | 448 | 6 | 441 | 0.0 | 698 |
| MS.gene56285.t1 | AT5G56190 | 73.696 | 441 | 109 | 3 | 10 | 448 | 27 | 462 | 0.0 | 697 |
| MS.gene56285.t1 | AT1G78070 | 54.072 | 442 | 202 | 1 | 8 | 448 | 8 | 449 | 4.74e-180 | 511 |
| MS.gene56285.t1 | AT1G36070 | 54.433 | 406 | 182 | 2 | 45 | 447 | 11 | 416 | 2.70e-168 | 479 |
| MS.gene56285.t1 | AT1G36070 | 53.771 | 411 | 187 | 2 | 40 | 447 | 7 | 417 | 4.29e-168 | 479 |
| MS.gene56285.t1 | AT1G36070 | 55.303 | 396 | 174 | 2 | 55 | 447 | 4 | 399 | 8.55e-168 | 478 |
| MS.gene56285.t1 | AT1G78070 | 59.306 | 317 | 129 | 0 | 131 | 447 | 23 | 339 | 9.28e-146 | 419 |
| MS.gene56285.t1 | AT1G78070 | 59.236 | 314 | 128 | 0 | 134 | 447 | 25 | 338 | 1.28e-144 | 416 |
| MS.gene56285.t1 | AT1G36070 | 55.705 | 298 | 132 | 0 | 150 | 447 | 1 | 298 | 4.42e-128 | 373 |
| MS.gene56285.t1 | AT1G36070 | 55.705 | 298 | 132 | 0 | 150 | 447 | 1 | 298 | 4.42e-128 | 373 |
Find 119 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACTATTGCTCCATTATC+TGG | 0.125977 | 3.1:-5152197 | MS.gene56285:CDS |
| TCTGGTTGCTGGAGGATTTC+AGG | 0.127364 | 3.1:-5153918 | MS.gene56285:CDS |
| TCTGAAGTACTCAATGTTTC+TGG | 0.174983 | 3.1:-5154214 | MS.gene56285:CDS |
| GCTTATGCAGTTGAGGAATT+TGG | 0.211449 | 3.1:-5154317 | MS.gene56285:intron |
| GAACAAGAAATTGATTTCTT+TGG | 0.221456 | 3.1:-5151933 | MS.gene56285:CDS |
| CCCTGACCTGTCCCCTGAAT+GGG | 0.249837 | 3.1:+5155779 | None:intergenic |
| ATGAAAAGGGATTCGGTATC+TGG | 0.289000 | 3.1:+5151885 | None:intergenic |
| TGCAGTTGAGGAATTTGGTT+TGG | 0.296738 | 3.1:-5154312 | MS.gene56285:intron |
| GATTTCTTTGGTGAGATATC+AGG | 0.300013 | 3.1:-5151921 | MS.gene56285:CDS |
| GAGTCAACCAACATACTTTC+AGG | 0.305096 | 3.1:+5152346 | None:intergenic |
| TATGGTAGCCTTCTCGAATA+TGG | 0.308564 | 3.1:-5151843 | MS.gene56285:CDS |
| AGGACAAAACCTGTCGGATT+TGG | 0.308920 | 3.1:-5152109 | MS.gene56285:CDS |
| CTGGTTGCTGGAGGATTTCA+GGG | 0.323770 | 3.1:-5153917 | MS.gene56285:CDS |
| AATCAAGGTATGAGTAATTA+TGG | 0.324026 | 3.1:+5151814 | None:intergenic |
| TCCCTGACCTGTCCCCTGAA+TGG | 0.330861 | 3.1:+5155778 | None:intergenic |
| TAATCTAAGTGCCCAGATAA+TGG | 0.343332 | 3.1:+5152185 | None:intergenic |
| TTCTTCCGATGGCAAGTATA+TGG | 0.344733 | 3.1:-5152015 | MS.gene56285:CDS |
| AACCCCTCCAATAGACTTCC+AGG | 0.350840 | 3.1:+5153983 | None:intergenic |
| TGGAATCAGAAACTTTGATA+TGG | 0.354680 | 3.1:-5152672 | MS.gene56285:CDS |
| TGCAGTAAAAGATAATCTTC+TGG | 0.365063 | 3.1:-5153936 | MS.gene56285:CDS |
| AAAGATAATCTTCTGGTTGC+TGG | 0.366888 | 3.1:-5153929 | MS.gene56285:CDS |
| ATGTTGGTTGACTCTCAAAA+TGG | 0.369339 | 3.1:-5152337 | MS.gene56285:CDS |
| GGACAAAACCTGTCGGATTT+GGG | 0.377449 | 3.1:-5152108 | MS.gene56285:CDS |
| CAAGTCAGTGGCAGTGTTGA+AGG | 0.422513 | 3.1:-5152069 | MS.gene56285:CDS |
| CCCCATTCAGGGGACAGGTC+AGG | 0.425032 | 3.1:-5155780 | MS.gene56285:CDS |
| CATTCACTGGCCAGGGAAAA+CGG | 0.432055 | 3.1:+5152624 | None:intergenic |
| GCAGTTGAGGAATTTGGTTT+GGG | 0.432688 | 3.1:-5154311 | MS.gene56285:intron |
| GGTAAGCTACTTCTGATTGT+TGG | 0.440890 | 3.1:-5152376 | MS.gene56285:CDS |
| GAAACATCCTGGAAGTCTAT+TGG | 0.441146 | 3.1:-5153990 | MS.gene56285:CDS |
| CTTCAACACTGCCACTGACT+TGG | 0.442971 | 3.1:+5152070 | None:intergenic |
| AAGACATCCAGGGGATTCCT+TGG | 0.444253 | 3.1:-5155875 | MS.gene56285:CDS |
| AAGAAGAGGACAAGACATCC+AGG | 0.448707 | 3.1:-5155886 | MS.gene56285:CDS |
| GGGGTTTGGGATCGTACTTA+TGG | 0.456853 | 3.1:-5151861 | MS.gene56285:CDS |
| AGCTGACACCAGGTCGATCT+AGG | 0.458539 | 3.1:+5152894 | None:intergenic |
| GATCCCAAACCCCAATGAAA+AGG | 0.464205 | 3.1:+5151871 | None:intergenic |
| CGGAAGAATGCCGGATTGAA+CGG | 0.464795 | 3.1:+5152030 | None:intergenic |
| ATTATTCATTCGCATCATCA+TGG | 0.467805 | 3.1:-5152166 | MS.gene56285:CDS |
| GAGGATGAAATTGATATTGA+TGG | 0.475862 | 3.1:-5156163 | MS.gene56285:CDS |
| GAGAAAGGTATCGGCAAACT+AGG | 0.482881 | 3.1:-5155833 | MS.gene56285:CDS |
| GTAGCAAAGGTTACCCCATC+GGG | 0.483017 | 3.1:+5152140 | None:intergenic |
| ATCCCAAACCCCAATGAAAA+GGG | 0.484751 | 3.1:+5151872 | None:intergenic |
| ATCAGAAGTAGCTTACCATC+TGG | 0.484849 | 3.1:+5152382 | None:intergenic |
| AACCCCAATGAAAAGGGATT+CGG | 0.487207 | 3.1:+5151878 | None:intergenic |
| AGTTTGCCGATACCTTTCTC+TGG | 0.487413 | 3.1:+5155836 | None:intergenic |
| GAGACTCACATTCACTGGCC+AGG | 0.487504 | 3.1:+5152616 | None:intergenic |
| GATGGGGTAACCTTTGCTAC+TGG | 0.493849 | 3.1:-5152137 | MS.gene56285:CDS |
| GGCTATCCCAAGGAATCCCC+TGG | 0.505261 | 3.1:+5155868 | None:intergenic |
| CCCATTCAGGGGACAGGTCA+GGG | 0.514571 | 3.1:-5155779 | MS.gene56285:CDS |
| GGTGAATCTATTAATAGAGA+GGG | 0.515268 | 3.1:-5156142 | MS.gene56285:CDS |
| GTGAATCTATTAATAGAGAG+GGG | 0.517319 | 3.1:-5156141 | MS.gene56285:CDS |
| ACCTTTCTCTGGTGATGCTA+AGG | 0.517839 | 3.1:+5155847 | None:intergenic |
| AGACTATTGCTCCATTATCT+GGG | 0.519813 | 3.1:-5152196 | MS.gene56285:CDS |
| GCAATTAAATCATTGAATCA+AGG | 0.521945 | 3.1:+5151799 | None:intergenic |
| ACAGCATCAAATAATGATTG+TGG | 0.525146 | 3.1:-5152692 | MS.gene56285:CDS |
| GTCATAAATCTCAATGGCAT+TGG | 0.527036 | 3.1:+5152835 | None:intergenic |
| CCTGACCTGTCCCCTGAATG+GGG | 0.532977 | 3.1:+5155780 | None:intergenic |
| TCCAAGAGACTCACATTCAC+TGG | 0.540290 | 3.1:+5152611 | None:intergenic |
| GTCCTGGTTTCCAGTAGCAA+AGG | 0.540720 | 3.1:+5152127 | None:intergenic |
| AGACATCCAGGGGATTCCTT+GGG | 0.540725 | 3.1:-5155874 | MS.gene56285:CDS |
| TCGGAGCCATCCGTTCAATC+CGG | 0.541521 | 3.1:-5152040 | MS.gene56285:CDS |
| TCAGGGTGAACTTATTTGCA+AGG | 0.543023 | 3.1:-5153900 | MS.gene56285:intron |
| CCGCATGTCCCAAATCCGAC+AGG | 0.548918 | 3.1:+5152100 | None:intergenic |
| ACTTGCCATCGGAAGAATGC+CGG | 0.550082 | 3.1:+5152021 | None:intergenic |
| TCAATCCGGCATTCTTCCGA+TGG | 0.550539 | 3.1:-5152026 | MS.gene56285:CDS |
| AAAGGGTTATTGACCTCTGA+TGG | 0.553941 | 3.1:+5154181 | None:intergenic |
| GCCTTAGCATCACCAGAGAA+AGG | 0.557742 | 3.1:-5155848 | MS.gene56285:CDS |
| GAGTACTTCAGAACTTGTGC+AGG | 0.558524 | 3.1:+5154225 | None:intergenic |
| AACCTTTGCTACTGGAAACC+AGG | 0.567978 | 3.1:-5152129 | MS.gene56285:CDS |
| TATACATGCACAAAATCTGC+AGG | 0.568505 | 3.1:+5151981 | None:intergenic |
| AGACTCACATTCACTGGCCA+GGG | 0.568609 | 3.1:+5152617 | None:intergenic |
| ACATCCTGGAAGTCTATTGG+AGG | 0.572776 | 3.1:-5153987 | MS.gene56285:CDS |
| AGGTGAGTCATAAATCTCAA+TGG | 0.572927 | 3.1:+5152829 | None:intergenic |
| CACAGTTCTCAGTGACACAC+TGG | 0.574143 | 3.1:-5154258 | MS.gene56285:CDS |
| CATCATCATGGAATCCCGAT+GGG | 0.574164 | 3.1:-5152154 | MS.gene56285:CDS |
| AGTAGCAAAGGTTACCCCAT+CGG | 0.575325 | 3.1:+5152139 | None:intergenic |
| TTCAGGGGACAGGTCAGGGA+AGG | 0.578143 | 3.1:-5155775 | MS.gene56285:intron |
| GCATCACCAGAGAAAGGTAT+CGG | 0.579593 | 3.1:-5155842 | MS.gene56285:CDS |
| GATAATCTTCTGGTTGCTGG+AGG | 0.580685 | 3.1:-5153926 | MS.gene56285:CDS |
| GCAGTGTTGAAGGGAAATCT+CGG | 0.584746 | 3.1:-5152059 | MS.gene56285:CDS |
| AGAATGCCGGATTGAACGGA+TGG | 0.586242 | 3.1:+5152034 | None:intergenic |
| AAGTCAGTGGCAGTGTTGAA+GGG | 0.588027 | 3.1:-5152068 | MS.gene56285:CDS |
| AATATTCAGCATCACCACCT+TGG | 0.588906 | 3.1:+5156215 | None:intergenic |
| CATGTATATGACGTGAAAAG+TGG | 0.589414 | 3.1:-5151966 | MS.gene56285:CDS |
| TCACTGAGAACTGTGACATA+AGG | 0.591263 | 3.1:+5154266 | None:intergenic |
| TGGTGAATCTATTAATAGAG+AGG | 0.592341 | 3.1:-5156143 | MS.gene56285:CDS |
| CTTGAGCAAAAGCTGACACC+AGG | 0.594740 | 3.1:+5152884 | None:intergenic |
| CATACTTCTCTCAGTCCAGA+TGG | 0.594886 | 3.1:-5152397 | MS.gene56285:CDS |
| TGGACACGTTGCACCATCAG+AGG | 0.599503 | 3.1:-5154194 | MS.gene56285:intron |
| ACAGCTGCTCAAGCAAGAAG+AGG | 0.600613 | 3.1:-5155900 | MS.gene56285:CDS |
| CATCCTGGAAGTCTATTGGA+GGG | 0.605352 | 3.1:-5153986 | MS.gene56285:CDS |
| GATTGTAAAAGCACGGACAA+AGG | 0.607503 | 3.1:-5154816 | MS.gene56285:CDS |
| GGTATGAGTAATTATGGCGC+CGG | 0.607817 | 3.1:+5151820 | None:intergenic |
| GCATCATCATGGAATCCCGA+TGG | 0.607878 | 3.1:-5152155 | MS.gene56285:CDS |
| GGTTGACTCTCAAAATGGAA+AGG | 0.608076 | 3.1:-5152332 | MS.gene56285:intron |
| GTGAAAATGTCTCATCGCCA+AGG | 0.610020 | 3.1:-5156232 | None:intergenic |
| TTGAGATTTATGACTCACCT+AGG | 0.613462 | 3.1:-5152826 | MS.gene56285:intron |
| GTAGCCTTCTCGAATATGGC+CGG | 0.615508 | 3.1:-5151839 | MS.gene56285:CDS |
| TGCGGATGAATATGAAATGG+AGG | 0.616643 | 3.1:-5156191 | MS.gene56285:CDS |
| CTGACCTGTCCCCTGAATGG+GGG | 0.619493 | 3.1:+5155781 | None:intergenic |
| AGAAGAGGACAAGACATCCA+GGG | 0.624570 | 3.1:-5155885 | MS.gene56285:CDS |
| CAAACAGGATTGTAAAAGCA+CGG | 0.625588 | 3.1:-5154823 | MS.gene56285:intron |
| TGTAGATGAATATGATTACT+CGG | 0.633196 | 3.1:-5156101 | MS.gene56285:intron |
| ATCCTGGAAGTCTATTGGAG+GGG | 0.633313 | 3.1:-5153985 | MS.gene56285:CDS |
| ATATTCATCTACATCAGACT+CGG | 0.638509 | 3.1:+5156111 | None:intergenic |
| ATATGAAATGGAGGATGTAG+AGG | 0.641938 | 3.1:-5156182 | MS.gene56285:CDS |
| CCTGTCGGATTTGGGACATG+CGG | 0.645322 | 3.1:-5152100 | MS.gene56285:CDS |
| AGACAATCCTGAAAGTATGT+TGG | 0.648208 | 3.1:-5152353 | MS.gene56285:CDS |
| TGAATCTATTAATAGAGAGG+GGG | 0.652726 | 3.1:-5156140 | MS.gene56285:CDS |
| TATAGCCATATACTTGCCAT+CGG | 0.653031 | 3.1:+5152010 | None:intergenic |
| GCGGAATTTATCCAAGTCAG+TGG | 0.655008 | 3.1:-5152081 | MS.gene56285:CDS |
| GAATCTATTAATAGAGAGGG+GGG | 0.659743 | 3.1:-5156139 | MS.gene56285:CDS |
| GGCGCCGGCCATATTCGAGA+AGG | 0.664131 | 3.1:+5151835 | None:intergenic |
| GAAGAGGACAAGACATCCAG+GGG | 0.669643 | 3.1:-5155884 | MS.gene56285:CDS |
| ATGCAGCACCTAGATCGACC+TGG | 0.674184 | 3.1:-5152902 | MS.gene56285:intron |
| ATGTATATGACGTGAAAAGT+GGG | 0.674883 | 3.1:-5151965 | MS.gene56285:CDS |
| ATCATCATGGAATCCCGATG+GGG | 0.681047 | 3.1:-5152153 | MS.gene56285:CDS |
| GAAACCAGGACAAAACCTGT+CGG | 0.683580 | 3.1:-5152115 | MS.gene56285:CDS |
| GTGATGCTAAGGCTATCCCA+AGG | 0.695903 | 3.1:+5155858 | None:intergenic |
| AAAATGTCTCATCGCCAAGG+TGG | 0.737513 | 3.1:-5156229 | MS.gene56285:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAACTATAAAAAAAC+AGG | + | chr3.1:5155017-5155036 | None:intergenic | 10.0% |
| !! | AGATAATAATAATAATAAAC+AGG | + | chr3.1:5153182-5153201 | None:intergenic | 10.0% |
| !! | ATAAATAAGATTTATGTTCT+GGG | - | chr3.1:5154704-5154723 | MS.gene56285:intron | 15.0% |
| !! | TAACTATGGTTTATTTATAT+CGG | + | chr3.1:5152356-5152375 | None:intergenic | 15.0% |
| !! | TATAAATAAGATTTATGTTC+TGG | - | chr3.1:5154703-5154722 | MS.gene56285:intron | 15.0% |
| !! | TATCAAAATAATTAAAGAGA+AGG | + | chr3.1:5155240-5155259 | None:intergenic | 15.0% |
| !! | TATTATTATCTATATCAAAC+AGG | - | chr3.1:5153191-5153210 | MS.gene56285:intron | 15.0% |
| !!! | ATATTTTTAATAATGGACAT+TGG | - | chr3.1:5155257-5155276 | MS.gene56285:intron | 15.0% |
| !! | AAAACATAAAACAAATCCTA+TGG | + | chr3.1:5155062-5155081 | None:intergenic | 20.0% |
| !! | AAACATAAAACAAATCCTAT+GGG | + | chr3.1:5155061-5155080 | None:intergenic | 20.0% |
| !! | AGAATATAAATAGAAAGCAA+AGG | + | chr3.1:5155583-5155602 | None:intergenic | 20.0% |
| !! | ATAACTACAATATTACTCAT+AGG | + | chr3.1:5152080-5152099 | None:intergenic | 20.0% |
| !! | CTAAAATTGTTCATTTAAGA+GGG | + | chr3.1:5155472-5155491 | None:intergenic | 20.0% |
| !! | CTTAAAATTGTGAGATATTT+AGG | + | chr3.1:5154761-5154780 | None:intergenic | 20.0% |
| !! | TAAAATTGTTCATTTAAGAG+GGG | + | chr3.1:5155471-5155490 | None:intergenic | 20.0% |
| !! | TAAATAATTCATCAAGCAAA+TGG | - | chr3.1:5152035-5152054 | MS.gene56285:CDS | 20.0% |
| !! | TATGAGTAATATTGTAGTTA+TGG | - | chr3.1:5152079-5152098 | MS.gene56285:CDS | 20.0% |
| !! | TGATGAATTATTTACTTAGA+AGG | + | chr3.1:5152029-5152048 | None:intergenic | 20.0% |
| !!! | AAATGAACAATTTTAGCATT+AGG | - | chr3.1:5155476-5155495 | MS.gene56285:intron | 20.0% |
| !!! | TCTGAAATATCAAAAAGAAA+AGG | + | chr3.1:5152293-5152312 | None:intergenic | 20.0% |
| !!! | TTTTCAGGTAATATTGTAAA+AGG | - | chr3.1:5154366-5154385 | MS.gene56285:intron | 20.0% |
| !!! | TTTTTCATTCATGTTATCTA+TGG | - | chr3.1:5154924-5154943 | MS.gene56285:intron | 20.0% |
| ! | AAATATAATCGCTATGACAT+AGG | - | chr3.1:5152873-5152892 | MS.gene56285:CDS | 25.0% |
| ! | AACATAAAACAAATCCTATG+GGG | + | chr3.1:5155060-5155079 | None:intergenic | 25.0% |
| ! | AACTTCTTTAATCATGTCAT+TGG | - | chr3.1:5152317-5152336 | MS.gene56285:intron | 25.0% |
| ! | AATAATAAACAGGTAAGCAT+AGG | + | chr3.1:5153172-5153191 | None:intergenic | 25.0% |
| ! | AATATAATCGCTATGACATA+GGG | - | chr3.1:5152874-5152893 | MS.gene56285:CDS | 25.0% |
| ! | AATCAAGGTATGAGTAATTA+TGG | + | chr3.1:5156218-5156237 | None:intergenic | 25.0% |
| ! | AGTAGATAAGAAAAACATAG+AGG | + | chr3.1:5152689-5152708 | None:intergenic | 25.0% |
| ! | ATAATACTAAGTATATCTCC+TGG | + | chr3.1:5152830-5152849 | None:intergenic | 25.0% |
| ! | ATGTTTATATCATAGTCATC+TGG | + | chr3.1:5153147-5153166 | None:intergenic | 25.0% |
| ! | ATTGATTATTTGACCGAAAA+GGG | + | chr3.1:5155735-5155754 | None:intergenic | 25.0% |
| ! | GCTAAAATTGTTCATTTAAG+AGG | + | chr3.1:5155473-5155492 | None:intergenic | 25.0% |
| ! | GTGTGTTAAATCAATAATCA+CGG | + | chr3.1:5155285-5155304 | None:intergenic | 25.0% |
| ! | TGAATTATTTACTTAGAAGG+AGG | + | chr3.1:5152026-5152045 | None:intergenic | 25.0% |
| ! | TGTAGATGAATATGATTACT+CGG | - | chr3.1:5151928-5151947 | MS.gene56285:CDS | 25.0% |
| ! | TGTCAGAAAAATTTATCTTG+TGG | - | chr3.1:5153456-5153475 | MS.gene56285:intron | 25.0% |
| ! | TGTTATGAATATGATGTACA+TGG | - | chr3.1:5151992-5152011 | MS.gene56285:CDS | 25.0% |
| ! | TTATGCTCAATTAAAACAGA+TGG | + | chr3.1:5152498-5152517 | None:intergenic | 25.0% |
| ! | TTCAGTAACAAAGAAAGTAA+TGG | + | chr3.1:5155107-5155126 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTGAGATATCAC+TGG | - | chr3.1:5152594-5152613 | MS.gene56285:intron | 25.0% |
| ! | TTTCATCTATGTAAAGATAC+TGG | - | chr3.1:5154401-5154420 | MS.gene56285:intron | 25.0% |
| !! | ATCAACAATTCTTCATTTTC+AGG | - | chr3.1:5153278-5153297 | MS.gene56285:intron | 25.0% |
| !! | ATGAGCATTGCTTTAATAAT+TGG | - | chr3.1:5154817-5154836 | MS.gene56285:CDS | 25.0% |
| !! | GAACAAGAAATTGATTTCTT+TGG | - | chr3.1:5156096-5156115 | MS.gene56285:intron | 25.0% |
| !! | GATACTCATTTTATGAGTTT+AGG | - | chr3.1:5153235-5153254 | MS.gene56285:intron | 25.0% |
| !!! | AAGATTTTGACGTTGATTAA+AGG | + | chr3.1:5154432-5154451 | None:intergenic | 25.0% |
| !!! | AAGTAAAAGCATTAGGTAAA+GGG | + | chr3.1:5153868-5153887 | None:intergenic | 25.0% |
| !!! | ACGATTTTTAGCATTTTCTT+AGG | + | chr3.1:5152750-5152769 | None:intergenic | 25.0% |
| !!! | AGATTTTGACGTTGATTAAA+GGG | + | chr3.1:5154431-5154450 | None:intergenic | 25.0% |
| !!! | AGTCATCATTTTTGTAAAAG+AGG | + | chr3.1:5154509-5154528 | None:intergenic | 25.0% |
| !!! | ATAATCTCTACTTTGTTTTG+TGG | - | chr3.1:5154181-5154200 | MS.gene56285:intron | 25.0% |
| !!! | ATAGTCAATACGTCTTTTTT+TGG | - | chr3.1:5152945-5152964 | MS.gene56285:intron | 25.0% |
| !!! | ATATCTCACTTTTTAAAGCA+AGG | + | chr3.1:5152591-5152610 | None:intergenic | 25.0% |
| !!! | GCATTTTTTTAAATCTGTTG+TGG | - | chr3.1:5154209-5154228 | MS.gene56285:CDS | 25.0% |
| AAAAAACAGGTAGAGTCTAA+TGG | + | chr3.1:5155004-5155023 | None:intergenic | 30.0% | |
| AAAAACAGGTAGAGTCTAAT+GGG | + | chr3.1:5155003-5155022 | None:intergenic | 30.0% | |
| ACAGCATCAAATAATGATTG+TGG | - | chr3.1:5155337-5155356 | MS.gene56285:intron | 30.0% | |
| ACATAAAACAAATCCTATGG+GGG | + | chr3.1:5155059-5155078 | None:intergenic | 30.0% | |
| AGAAGGAAAACTAAATACCT+AGG | + | chr3.1:5155223-5155242 | None:intergenic | 30.0% | |
| AGCATTGCTTTAATAATTGG+TGG | - | chr3.1:5154820-5154839 | MS.gene56285:intron | 30.0% | |
| AGGTGAGTAAACTAAATTAG+AGG | + | chr3.1:5152669-5152688 | None:intergenic | 30.0% | |
| ATATAATCGCTATGACATAG+GGG | - | chr3.1:5152875-5152894 | MS.gene56285:CDS | 30.0% | |
| ATATTCATCTACATCAGACT+CGG | + | chr3.1:5151921-5151940 | None:intergenic | 30.0% | |
| ATGTATATGACGTGAAAAGT+GGG | - | chr3.1:5156064-5156083 | MS.gene56285:intron | 30.0% | |
| ATTATTCATTCGCATCATCA+TGG | - | chr3.1:5155863-5155882 | MS.gene56285:CDS | 30.0% | |
| CAGATTCCTTTCATGAAATT+GGG | + | chr3.1:5152457-5152476 | None:intergenic | 30.0% | |
| CATTATGTTCAAATGTTTCG+CGG | + | chr3.1:5154270-5154289 | None:intergenic | 30.0% | |
| GACAGTAAAATACTTGATTG+CGG | - | chr3.1:5153478-5153497 | MS.gene56285:intron | 30.0% | |
| GAGGATGAAATTGATATTGA+TGG | - | chr3.1:5151866-5151885 | MS.gene56285:CDS | 30.0% | |
| GAGTAATATTGTAGTTATGG+TGG | - | chr3.1:5152082-5152101 | MS.gene56285:CDS | 30.0% | |
| GATTGATTATTTGACCGAAA+AGG | + | chr3.1:5155736-5155755 | None:intergenic | 30.0% | |
| GGTGAATCTATTAATAGAGA+GGG | - | chr3.1:5151887-5151906 | MS.gene56285:CDS | 30.0% | |
| GTGAATCTATTAATAGAGAG+GGG | - | chr3.1:5151888-5151907 | MS.gene56285:CDS | 30.0% | |
| TATCTATGGTTCAGCTAATT+AGG | - | chr3.1:5154938-5154957 | MS.gene56285:intron | 30.0% | |
| TGAATCTATTAATAGAGAGG+GGG | - | chr3.1:5151889-5151908 | MS.gene56285:CDS | 30.0% | |
| TGAGAAGTAGCTAAAAACTA+AGG | + | chr3.1:5154886-5154905 | None:intergenic | 30.0% | |
| TGCAGTAAAAGATAATCTTC+TGG | - | chr3.1:5154093-5154112 | MS.gene56285:intron | 30.0% | |
| TGGAATCAGAAACTTTGATA+TGG | - | chr3.1:5155357-5155376 | MS.gene56285:intron | 30.0% | |
| TGGTGAATCTATTAATAGAG+AGG | - | chr3.1:5151886-5151905 | MS.gene56285:CDS | 30.0% | |
| TGTTGTGAGTTATGTAACTA+TGG | + | chr3.1:5152370-5152389 | None:intergenic | 30.0% | |
| TTGAAATTGTATAGACCACA+TGG | - | chr3.1:5154785-5154804 | MS.gene56285:CDS | 30.0% | |
| TTTAACTACTACACTTGCAT+TGG | - | chr3.1:5152557-5152576 | MS.gene56285:intron | 30.0% | |
| ! | AGCTTTGTAGGTATATTTGA+GGG | + | chr3.1:5153052-5153071 | None:intergenic | 30.0% |
| ! | AGTTCTGCATATGCATATTT+TGG | - | chr3.1:5154968-5154987 | MS.gene56285:intron | 30.0% |
| ! | ATCTACTCTGGTTTCTATAA+TGG | - | chr3.1:5153316-5153335 | MS.gene56285:intron | 30.0% |
| ! | TTTTATTGTCAGAAACATCC+TGG | - | chr3.1:5154028-5154047 | MS.gene56285:intron | 30.0% |
| ! | TTTTGCGGATGAATATGAAA+TGG | - | chr3.1:5151835-5151854 | MS.gene56285:CDS | 30.0% |
| ! | TTTTTATGCTTATGCAGTTG+AGG | - | chr3.1:5153705-5153724 | MS.gene56285:intron | 30.0% |
| !! | AAGTAATGGATGTATATCAG+CGG | + | chr3.1:5155093-5155112 | None:intergenic | 30.0% |
| !! | ATCATTTTTGTAAAAGAGGC+TGG | + | chr3.1:5154505-5154524 | None:intergenic | 30.0% |
| !! | CAAGTAAAAGCATTAGGTAA+AGG | + | chr3.1:5153869-5153888 | None:intergenic | 30.0% |
| !! | CTGGTTTCTATAATGGATTA+AGG | - | chr3.1:5153323-5153342 | MS.gene56285:intron | 30.0% |
| !! | TGGTAATGAGTAACTTTTTC+AGG | - | chr3.1:5154351-5154370 | MS.gene56285:intron | 30.0% |
| !!! | TAGTTTTTAGCTACTTCTCA+AGG | - | chr3.1:5154886-5154905 | MS.gene56285:intron | 30.0% |
| AAAACTAAGGCTCGAATTGA+AGG | + | chr3.1:5154873-5154892 | None:intergenic | 35.0% | |
| AAATTGTGCAGTCTGTTCAT+AGG | - | chr3.1:5153591-5153610 | MS.gene56285:intron | 35.0% | |
| AGACTATTGCTCCATTATCT+GGG | - | chr3.1:5155833-5155852 | MS.gene56285:CDS | 35.0% | |
| AGGAAAAAATGTCGCAATCA+AGG | + | chr3.1:5152730-5152749 | None:intergenic | 35.0% | |
| AGGAAACATTGCTTACACTT+AGG | - | chr3.1:5155496-5155515 | MS.gene56285:intron | 35.0% | |
| AGGTGAGTCATAAATCTCAA+TGG | + | chr3.1:5155203-5155222 | None:intergenic | 35.0% | |
| ATAGAAACCAGAGTAGATAC+AGG | + | chr3.1:5153314-5153333 | None:intergenic | 35.0% | |
| ATATGAAATGGAGGATGTAG+AGG | - | chr3.1:5151847-5151866 | MS.gene56285:CDS | 35.0% | |
| ATGAAAATATCCCCCATTCA+GGG | - | chr3.1:5152238-5152257 | MS.gene56285:intron | 35.0% | |
| ATGAGGCTGTTAATATCATG+TGG | + | chr3.1:5154559-5154578 | None:intergenic | 35.0% | |
| ATTGACTATGTATACCCCAA+TGG | + | chr3.1:5152934-5152953 | None:intergenic | 35.0% | |
| CAAACAGGATTGTAAAAGCA+CGG | - | chr3.1:5153206-5153225 | MS.gene56285:intron | 35.0% | |
| CATGTATATGACGTGAAAAG+TGG | - | chr3.1:5156063-5156082 | MS.gene56285:intron | 35.0% | |
| CTTTGTAGGTATATTTGAGG+GGG | + | chr3.1:5153050-5153069 | None:intergenic | 35.0% | |
| GAATCTATTAATAGAGAGGG+GGG | - | chr3.1:5151890-5151909 | MS.gene56285:CDS | 35.0% | |
| GATTTCTTTGGTGAGATATC+AGG | - | chr3.1:5156108-5156127 | MS.gene56285:CDS | 35.0% | |
| GCAGATTCCTTTCATGAAAT+TGG | + | chr3.1:5152458-5152477 | None:intergenic | 35.0% | |
| GCTCATTAAATAGTTCCATG+TGG | + | chr3.1:5154803-5154822 | None:intergenic | 35.0% | |
| GCTTTGTAGGTATATTTGAG+GGG | + | chr3.1:5153051-5153070 | None:intergenic | 35.0% | |
| GTCATAAATCTCAATGGCAT+TGG | + | chr3.1:5155197-5155216 | None:intergenic | 35.0% | |
| GTGGTGCAACATGATTTAAA+GGG | + | chr3.1:5153897-5153916 | None:intergenic | 35.0% | |
| TAATCTAAGTGCCCAGATAA+TGG | + | chr3.1:5155847-5155866 | None:intergenic | 35.0% | |
| TAGGACATTTAACTGCACAA+TGG | - | chr3.1:5153352-5153371 | MS.gene56285:intron | 35.0% | |
| TATACATGCACAAAATCTGC+AGG | + | chr3.1:5156051-5156070 | None:intergenic | 35.0% | |
| TATAGCCATATACTTGCCAT+CGG | + | chr3.1:5156022-5156041 | None:intergenic | 35.0% | |
| TATGAAAATATCCCCCATTC+AGG | - | chr3.1:5152237-5152256 | MS.gene56285:intron | 35.0% | |
| TCCAATTTCGATGCTATATG+AGG | + | chr3.1:5154576-5154595 | None:intergenic | 35.0% | |
| TGTTCATTTAAGAGGGGATA+GGG | + | chr3.1:5155465-5155484 | None:intergenic | 35.0% | |
| TTGAGATTTATGACTCACCT+AGG | - | chr3.1:5155203-5155222 | MS.gene56285:intron | 35.0% | |
| TTGATTTAACACACCTTTCC+TGG | - | chr3.1:5155291-5155310 | MS.gene56285:intron | 35.0% | |
| TTGTTCATTTAAGAGGGGAT+AGG | + | chr3.1:5155466-5155485 | None:intergenic | 35.0% | |
| ! | AAAGATAATCTTCTGGTTGC+TGG | - | chr3.1:5154100-5154119 | MS.gene56285:intron | 35.0% |
| ! | AGACAATCCTGAAAGTATGT+TGG | - | chr3.1:5155676-5155695 | MS.gene56285:intron | 35.0% |
| ! | ATACCGAATCCCTTTTCATT+GGG | - | chr3.1:5156148-5156167 | MS.gene56285:CDS | 35.0% |
| ! | ATCGAAATTGGATGATGATG+TGG | - | chr3.1:5154584-5154603 | MS.gene56285:intron | 35.0% |
| ! | ATGTTGGTTGACTCTCAAAA+TGG | - | chr3.1:5155692-5155711 | MS.gene56285:intron | 35.0% |
| ! | ATTCTTTTCAGTGTGTGGTA+TGG | + | chr3.1:5153118-5153137 | None:intergenic | 35.0% |
| ! | ATTTTTGTAAAAGAGGCTGG+CGG | + | chr3.1:5154502-5154521 | None:intergenic | 35.0% |
| ! | GAGCTTTGTAGGTATATTTG+AGG | + | chr3.1:5153053-5153072 | None:intergenic | 35.0% |
| ! | TCACAATTCTTTTCAGTGTG+TGG | + | chr3.1:5153123-5153142 | None:intergenic | 35.0% |
| ! | TCTGAAGTACTCAATGTTTC+TGG | - | chr3.1:5153815-5153834 | MS.gene56285:intron | 35.0% |
| ! | TTCTTTTCAGTGTGTGGTAT+GGG | + | chr3.1:5153117-5153136 | None:intergenic | 35.0% |
| !! | AAGGATTGGTTTGCAACTAA+GGG | + | chr3.1:5152797-5152816 | None:intergenic | 35.0% |
| !! | GCTATGCAAGTAAAAGCATT+AGG | + | chr3.1:5153875-5153894 | None:intergenic | 35.0% |
| !! | TAAGGATTGGTTTGCAACTA+AGG | + | chr3.1:5152798-5152817 | None:intergenic | 35.0% |
| !! | TAATGGATTAAGGATGCACT+AGG | - | chr3.1:5153333-5153352 | MS.gene56285:intron | 35.0% |
| !! | TGGTGATGCTGAATATTTTG+CGG | - | chr3.1:5151820-5151839 | MS.gene56285:CDS | 35.0% |
| !!! | GTCAATACGTCTTTTTTTGG+TGG | - | chr3.1:5152948-5152967 | MS.gene56285:intron | 35.0% |
| AAAGGGTTATTGACCTCTGA+TGG | + | chr3.1:5153851-5153870 | None:intergenic | 40.0% | |
| AACCCCAATGAAAAGGGATT+CGG | + | chr3.1:5156154-5156173 | None:intergenic | 40.0% | |
| AATATTCAGCATCACCACCT+TGG | + | chr3.1:5151817-5151836 | None:intergenic | 40.0% | |
| AATGGATGTATATCAGCGGA+TGG | + | chr3.1:5155089-5155108 | None:intergenic | 40.0% | |
| AATTGTTAGCGAGAACTGTG+AGG | - | chr3.1:5153530-5153549 | MS.gene56285:intron | 40.0% | |
| ACAGCAAACAAAGTGAAGTG+GGG | + | chr3.1:5154650-5154669 | None:intergenic | 40.0% | |
| ATCAGAAGTAGCTTACCATC+TGG | + | chr3.1:5155650-5155669 | None:intergenic | 40.0% | |
| ATCCCAAACCCCAATGAAAA+GGG | + | chr3.1:5156160-5156179 | None:intergenic | 40.0% | |
| CAACAATTCATAGAGAACCG+TGG | - | chr3.1:5152385-5152404 | MS.gene56285:CDS | 40.0% | |
| CACAGCAAACAAAGTGAAGT+GGG | + | chr3.1:5154651-5154670 | None:intergenic | 40.0% | |
| CAGACTATTGCTCCATTATC+TGG | - | chr3.1:5155832-5155851 | MS.gene56285:CDS | 40.0% | |
| CAGAGACTTAGGACTTTACA+GGG | + | chr3.1:5154466-5154485 | None:intergenic | 40.0% | |
| GAAACATCCTGGAAGTCTAT+TGG | - | chr3.1:5154039-5154058 | MS.gene56285:intron | 40.0% | |
| GAGTCAACCAACATACTTTC+AGG | + | chr3.1:5155686-5155705 | None:intergenic | 40.0% | |
| GCTGTTAATATCATGTGGCA+TGG | + | chr3.1:5154554-5154573 | None:intergenic | 40.0% | |
| GCTTATGCAGTTGAGGAATT+TGG | - | chr3.1:5153712-5153731 | MS.gene56285:intron | 40.0% | |
| GGTAAGCTACTTCTGATTGT+TGG | - | chr3.1:5155653-5155672 | MS.gene56285:intron | 40.0% | |
| GGTGGTGCAACATGATTTAA+AGG | + | chr3.1:5153898-5153917 | None:intergenic | 40.0% | |
| TACACTTAGGCTGTACTGTA+TGG | - | chr3.1:5155509-5155528 | MS.gene56285:intron | 40.0% | |
| TATGGTAGCCTTCTCGAATA+TGG | - | chr3.1:5156186-5156205 | MS.gene56285:CDS | 40.0% | |
| TCACTGAGAACTGTGACATA+AGG | + | chr3.1:5153766-5153785 | None:intergenic | 40.0% | |
| TCAGGGTGAACTTATTTGCA+AGG | - | chr3.1:5154129-5154148 | MS.gene56285:intron | 40.0% | |
| TCCGCCACTAAATACTTTGA+GGG | - | chr3.1:5153071-5153090 | MS.gene56285:intron | 40.0% | |
| TGAAAATATCCCCCATTCAG+GGG | - | chr3.1:5152239-5152258 | MS.gene56285:intron | 40.0% | |
| TGCAGTTGAGGAATTTGGTT+TGG | - | chr3.1:5153717-5153736 | MS.gene56285:intron | 40.0% | |
| TGCGGATGAATATGAAATGG+AGG | - | chr3.1:5151838-5151857 | MS.gene56285:CDS | 40.0% | |
| TGCTGCAGCATAGCATAAAA+AGG | + | chr3.1:5155614-5155633 | None:intergenic | 40.0% | |
| TGTGAATCTTGAGTAGTACC+TGG | - | chr3.1:5153615-5153634 | MS.gene56285:intron | 40.0% | |
| TTCTTCCGATGGCAAGTATA+TGG | - | chr3.1:5156014-5156033 | MS.gene56285:intron | 40.0% | |
| ! | AATCCCTTTTCATTGGGGTT+TGG | - | chr3.1:5156154-5156173 | MS.gene56285:CDS | 40.0% |
| ! | ACCCTCAAAGTATTTAGTGG+CGG | + | chr3.1:5153075-5153094 | None:intergenic | 40.0% |
| ! | ATCCCTTTTCATTGGGGTTT+GGG | - | chr3.1:5156155-5156174 | MS.gene56285:CDS | 40.0% |
| ! | ATGAAAAGGGATTCGGTATC+TGG | + | chr3.1:5156147-5156166 | None:intergenic | 40.0% |
| ! | GATACCGAATCCCTTTTCAT+TGG | - | chr3.1:5156147-5156166 | MS.gene56285:CDS | 40.0% |
| ! | GATTGTAAAAGCACGGACAA+AGG | - | chr3.1:5153213-5153232 | MS.gene56285:intron | 40.0% |
| ! | GCAACCCTCAAAGTATTTAG+TGG | + | chr3.1:5153078-5153097 | None:intergenic | 40.0% |
| ! | GCAGTTGAGGAATTTGGTTT+GGG | - | chr3.1:5153718-5153737 | MS.gene56285:intron | 40.0% |
| ! | GCCTCATATAGCATCGAAAT+TGG | - | chr3.1:5154572-5154591 | MS.gene56285:intron | 40.0% |
| ! | GGTTGACTCTCAAAATGGAA+AGG | - | chr3.1:5155697-5155716 | MS.gene56285:intron | 40.0% |
| ! | TACCGAATCCCTTTTCATTG+GGG | - | chr3.1:5156149-5156168 | MS.gene56285:CDS | 40.0% |
| !! | AGGATTGGTTTGCAACTAAG+GGG | + | chr3.1:5152796-5152815 | None:intergenic | 40.0% |
| AAAGCAAAGGAGTCACAGTG+GGG | + | chr3.1:5155570-5155589 | None:intergenic | 45.0% | |
| AACCTTTGCTACTGGAAACC+AGG | - | chr3.1:5155900-5155919 | MS.gene56285:CDS | 45.0% | |
| AAGAAGAGGACAAGACATCC+AGG | - | chr3.1:5152143-5152162 | MS.gene56285:CDS | 45.0% | |
| AAGTATATCTCCTGGCGTAG+TGG | + | chr3.1:5152822-5152841 | None:intergenic | 45.0% | |
| ACATCCTGGAAGTCTATTGG+AGG | - | chr3.1:5154042-5154061 | MS.gene56285:intron | 45.0% | |
| AGAAAGCAAAGGAGTCACAG+TGG | + | chr3.1:5155572-5155591 | None:intergenic | 45.0% | |
| AGAAGAGGACAAGACATCCA+GGG | - | chr3.1:5152144-5152163 | MS.gene56285:CDS | 45.0% | |
| AGGACAAAACCTGTCGGATT+TGG | - | chr3.1:5155920-5155939 | MS.gene56285:CDS | 45.0% | |
| AGTAGCAAAGGTTACCCCAT+CGG | + | chr3.1:5155893-5155912 | None:intergenic | 45.0% | |
| AGTAGTACCTGGCATGTCAT+AGG | - | chr3.1:5153626-5153645 | MS.gene56285:intron | 45.0% | |
| AGTTTGCCGATACCTTTCTC+TGG | + | chr3.1:5152196-5152215 | None:intergenic | 45.0% | |
| ATAACCAAGATCCGCCATTG+GGG | - | chr3.1:5152917-5152936 | MS.gene56285:intron | 45.0% | |
| ATCATCATGGAATCCCGATG+GGG | - | chr3.1:5155876-5155895 | MS.gene56285:CDS | 45.0% | |
| ATCCTGGAAGTCTATTGGAG+GGG | - | chr3.1:5154044-5154063 | MS.gene56285:intron | 45.0% | |
| ATTCATAGAGAACCGTGGAC+CGG | - | chr3.1:5152390-5152409 | MS.gene56285:CDS | 45.0% | |
| CAGCAAACAAAGTGAAGTGG+GGG | + | chr3.1:5154649-5154668 | None:intergenic | 45.0% | |
| CATAACCAAGATCCGCCATT+GGG | - | chr3.1:5152916-5152935 | MS.gene56285:intron | 45.0% | |
| CATACTTCTCTCAGTCCAGA+TGG | - | chr3.1:5155632-5155651 | MS.gene56285:intron | 45.0% | |
| CATCATCATGGAATCCCGAT+GGG | - | chr3.1:5155875-5155894 | MS.gene56285:CDS | 45.0% | |
| CATCCTGGAAGTCTATTGGA+GGG | - | chr3.1:5154043-5154062 | MS.gene56285:intron | 45.0% | |
| CCACAGCAAACAAAGTGAAG+TGG | + | chr3.1:5154652-5154671 | None:intergenic | 45.0% | |
| CTCCGCCACTAAATACTTTG+AGG | - | chr3.1:5153070-5153089 | MS.gene56285:intron | 45.0% | |
| GAAACCAGGACAAAACCTGT+CGG | - | chr3.1:5155914-5155933 | MS.gene56285:CDS | 45.0% | |
| GAAAGCAAAGGAGTCACAGT+GGG | + | chr3.1:5155571-5155590 | None:intergenic | 45.0% | |
| GAAAGTTGTAGCAACGCTCT+AGG | + | chr3.1:5154849-5154868 | None:intergenic | 45.0% | |
| GACTATGTATACCCCAATGG+CGG | + | chr3.1:5152931-5152950 | None:intergenic | 45.0% | |
| GAGTACTTCAGAACTTGTGC+AGG | + | chr3.1:5153807-5153826 | None:intergenic | 45.0% | |
| GATCCCAAACCCCAATGAAA+AGG | + | chr3.1:5156161-5156180 | None:intergenic | 45.0% | |
| GATTGCGGCTTCAAATCAAC+AGG | - | chr3.1:5153493-5153512 | MS.gene56285:intron | 45.0% | |
| GCAGACATGTGACTTACATG+TGG | - | chr3.1:5154331-5154350 | MS.gene56285:intron | 45.0% | |
| GCAGAGACTTAGGACTTTAC+AGG | + | chr3.1:5154467-5154486 | None:intergenic | 45.0% | |
| GCGGAATTTATCCAAGTCAG+TGG | - | chr3.1:5155948-5155967 | MS.gene56285:intron | 45.0% | |
| GGACAAAACCTGTCGGATTT+GGG | - | chr3.1:5155921-5155940 | MS.gene56285:CDS | 45.0% | |
| GGTATGAGTAATTATGGCGC+CGG | + | chr3.1:5156212-5156231 | None:intergenic | 45.0% | |
| GGTTCGCCCAATTTCATGAA+AGG | - | chr3.1:5152448-5152467 | MS.gene56285:intron | 45.0% | |
| GTAGCACGAGGTCTAAATGA+TGG | - | chr3.1:5153926-5153945 | MS.gene56285:CDS | 45.0% | |
| TAATCGCTATGACATAGGGG+TGG | - | chr3.1:5152878-5152897 | MS.gene56285:CDS | 45.0% | |
| TAGAACAAAGCTCCGGTGTA+CGG | + | chr3.1:5152642-5152661 | None:intergenic | 45.0% | |
| TATCATGTGGCATGGCAAGA+TGG | + | chr3.1:5154546-5154565 | None:intergenic | 45.0% | |
| TCATAACCAAGATCCGCCAT+TGG | - | chr3.1:5152915-5152934 | MS.gene56285:intron | 45.0% | |
| TCCAAGAGACTCACATTCAC+TGG | + | chr3.1:5155421-5155440 | None:intergenic | 45.0% | |
| TCGCAATCAAGGCTTGAACT+CGG | + | chr3.1:5152719-5152738 | None:intergenic | 45.0% | |
| TTCAAAGCCTATGACATGCC+AGG | + | chr3.1:5153636-5153655 | None:intergenic | 45.0% | |
| TTCAGTGTGTGGTATGGGTT+CGG | + | chr3.1:5153112-5153131 | None:intergenic | 45.0% | |
| ! | AAGTCAGTGGCAGTGTTGAA+GGG | - | chr3.1:5155961-5155980 | MS.gene56285:intron | 45.0% |
| ! | ACACCTTTCCTGGTTTGTAG+TGG | - | chr3.1:5155301-5155320 | MS.gene56285:intron | 45.0% |
| ! | ACCTTTCTCTGGTGATGCTA+AGG | + | chr3.1:5152185-5152204 | None:intergenic | 45.0% |
| ! | AGGAGTGTAGAACAAAGCTC+CGG | + | chr3.1:5152649-5152668 | None:intergenic | 45.0% |
| ! | ATTTAGTGGCGGAGCTTTGT+AGG | + | chr3.1:5153064-5153083 | None:intergenic | 45.0% |
| ! | CCACTTCACTTTGTTTGCTG+TGG | - | chr3.1:5154649-5154668 | MS.gene56285:intron | 45.0% |
| ! | GATAATCTTCTGGTTGCTGG+AGG | - | chr3.1:5154103-5154122 | MS.gene56285:intron | 45.0% |
| ! | GCAGTGTTGAAGGGAAATCT+CGG | - | chr3.1:5155970-5155989 | MS.gene56285:intron | 45.0% |
| ! | GCATCACCAGAGAAAGGTAT+CGG | - | chr3.1:5152187-5152206 | MS.gene56285:CDS | 45.0% |
| ! | GTAGTACTCTACGCCCTTTT+CGG | - | chr3.1:5155719-5155738 | MS.gene56285:intron | 45.0% |
| !! | AAATCCGACAGGTTTTGTCC+TGG | + | chr3.1:5155921-5155940 | None:intergenic | 45.0% |
| !! | AACAGATGGTTTTGCCTCTC+TGG | + | chr3.1:5152484-5152503 | None:intergenic | 45.0% |
| !! | ACTTTGTTTGCTGTGGTGCT+TGG | - | chr3.1:5154656-5154675 | MS.gene56285:intron | 45.0% |
| !! | CAAAGCATTTCCGTTTTCCC+TGG | - | chr3.1:5155395-5155414 | MS.gene56285:intron | 45.0% |
| !! | GAGAAAGGTATCGGCAAACT+AGG | - | chr3.1:5152196-5152215 | MS.gene56285:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+GGG | + | chr3.1:5153690-5153709 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAAAAAAAG+AGG | + | chr3.1:5153691-5153710 | None:intergenic | 5.0% |
| !! | TTATTTATTATTTACATATT+TGG | - | chr3.1:5153024-5153043 | MS.gene56285:intron | 5.0% |
| !!! | TATTTTGATATTTTTAATAA+TGG | - | chr3.1:5155250-5155269 | MS.gene56285:intron | 5.0% |
| AACCCCTCCAATAGACTTCC+AGG | + | chr3.1:5154049-5154068 | None:intergenic | 50.0% | |
| AAGACATCCAGGGGATTCCT+TGG | - | chr3.1:5152154-5152173 | MS.gene56285:CDS | 50.0% | |
| AAGGAATCTGCGTACCAGAG+AGG | - | chr3.1:5152467-5152486 | MS.gene56285:intron | 50.0% | |
| ACAGCTGCTCAAGCAAGAAG+AGG | - | chr3.1:5152129-5152148 | MS.gene56285:CDS | 50.0% | |
| ACTTGCCATCGGAAGAATGC+CGG | + | chr3.1:5156011-5156030 | None:intergenic | 50.0% | |
| AGAATGCCGGATTGAACGGA+TGG | + | chr3.1:5155998-5156017 | None:intergenic | 50.0% | |
| AGACATCCAGGGGATTCCTT+GGG | - | chr3.1:5152155-5152174 | MS.gene56285:CDS | 50.0% | |
| AGACTCACATTCACTGGCCA+GGG | + | chr3.1:5155415-5155434 | None:intergenic | 50.0% | |
| ATCTCCTGGCGTAGTGGTTA+AGG | + | chr3.1:5152816-5152835 | None:intergenic | 50.0% | |
| CAAACAAAGTGAAGTGGGGG+TGG | + | chr3.1:5154646-5154665 | None:intergenic | 50.0% | |
| CAATCCTTAACCACTACGCC+AGG | - | chr3.1:5152809-5152828 | MS.gene56285:intron | 50.0% | |
| CACAGTTCTCAGTGACACAC+TGG | - | chr3.1:5153771-5153790 | MS.gene56285:intron | 50.0% | |
| CATTCACTGGCCAGGGAAAA+CGG | + | chr3.1:5155408-5155427 | None:intergenic | 50.0% | |
| CGGAAGAATGCCGGATTGAA+CGG | + | chr3.1:5156002-5156021 | None:intergenic | 50.0% | |
| CTATGACATAGGGGTGGTCA+TGG | - | chr3.1:5152884-5152903 | MS.gene56285:CDS | 50.0% | |
| CTGGCGTAGTGGTTAAGGAT+TGG | + | chr3.1:5152811-5152830 | None:intergenic | 50.0% | |
| CTGGTTGCTGGAGGATTTCA+GGG | - | chr3.1:5154112-5154131 | MS.gene56285:intron | 50.0% | |
| CTTGAGCAAAAGCTGACACC+AGG | + | chr3.1:5155148-5155167 | None:intergenic | 50.0% | |
| GAACTGCACCACTACAAACC+AGG | + | chr3.1:5155312-5155331 | None:intergenic | 50.0% | |
| GAAGAGGACAAGACATCCAG+GGG | - | chr3.1:5152145-5152164 | MS.gene56285:CDS | 50.0% | |
| GATGGGGTAACCTTTGCTAC+TGG | - | chr3.1:5155892-5155911 | MS.gene56285:CDS | 50.0% | |
| GCACCACTACAAACCAGGAA+AGG | + | chr3.1:5155307-5155326 | None:intergenic | 50.0% | |
| GCATCATCATGGAATCCCGA+TGG | - | chr3.1:5155874-5155893 | MS.gene56285:CDS | 50.0% | |
| GCCAGTGAATGTGAGTCTCT+TGG | - | chr3.1:5155417-5155436 | MS.gene56285:intron | 50.0% | |
| GCCTTAGCATCACCAGAGAA+AGG | - | chr3.1:5152181-5152200 | MS.gene56285:CDS | 50.0% | |
| GCGAGGTGCAATACACTTGT+GGG | + | chr3.1:5152620-5152639 | None:intergenic | 50.0% | |
| GCGGATCTTGGTTATGACAG+GGG | + | chr3.1:5152912-5152931 | None:intergenic | 50.0% | |
| GCTATACATGTGTCCCCCAT+AGG | - | chr3.1:5155043-5155062 | MS.gene56285:intron | 50.0% | |
| GCTGTAGCCTGTATCTACTC+TGG | - | chr3.1:5153304-5153323 | MS.gene56285:intron | 50.0% | |
| GGCGGATCTTGGTTATGACA+GGG | + | chr3.1:5152913-5152932 | None:intergenic | 50.0% | |
| GGGAGCAAATGCAGAGACTT+AGG | + | chr3.1:5154477-5154496 | None:intergenic | 50.0% | |
| GTAGCAAAGGTTACCCCATC+GGG | + | chr3.1:5155892-5155911 | None:intergenic | 50.0% | |
| GTAGCCTTCTCGAATATGGC+CGG | - | chr3.1:5156190-5156209 | MS.gene56285:CDS | 50.0% | |
| GTCCTGGTTTCCAGTAGCAA+AGG | + | chr3.1:5155905-5155924 | None:intergenic | 50.0% | |
| GTGATGCTAAGGCTATCCCA+AGG | + | chr3.1:5152174-5152193 | None:intergenic | 50.0% | |
| TCAATCCGGCATTCTTCCGA+TGG | - | chr3.1:5156003-5156022 | MS.gene56285:intron | 50.0% | |
| TCAGTGTGTGGTATGGGTTC+GGG | + | chr3.1:5153111-5153130 | None:intergenic | 50.0% | |
| TCTGGTTGCTGGAGGATTTC+AGG | - | chr3.1:5154111-5154130 | MS.gene56285:intron | 50.0% | |
| TGGGGTGGGAATAGATAACG+AGG | + | chr3.1:5155552-5155571 | None:intergenic | 50.0% | |
| TGTAAAAGAGGCTGGCGGTA+GGG | + | chr3.1:5154497-5154516 | None:intergenic | 50.0% | |
| TTAGACCTCGTGCTACGTGA+TGG | + | chr3.1:5153922-5153941 | None:intergenic | 50.0% | |
| TTGTAAAAGAGGCTGGCGGT+AGG | + | chr3.1:5154498-5154517 | None:intergenic | 50.0% | |
| ! | CAAGTCAGTGGCAGTGTTGA+AGG | - | chr3.1:5155960-5155979 | MS.gene56285:intron | 50.0% |
| ! | CTTCAACACTGCCACTGACT+TGG | + | chr3.1:5155962-5155981 | None:intergenic | 50.0% |
| ! | GGGGTTTGGGATCGTACTTA+TGG | - | chr3.1:5156168-5156187 | MS.gene56285:CDS | 50.0% |
| ! | TGGATGATGATGTGGCGTTG+AGG | - | chr3.1:5154592-5154611 | MS.gene56285:intron | 50.0% |
| ! | TGGCGGATCTTGGTTATGAC+AGG | + | chr3.1:5152914-5152933 | None:intergenic | 50.0% |
| !! | CTGGTGTCAGCTTTTGCTCA+AGG | - | chr3.1:5155146-5155165 | MS.gene56285:intron | 50.0% |
| !! | TATACCCCAATGGCGGATCT+TGG | + | chr3.1:5152924-5152943 | None:intergenic | 50.0% |
| AAGTGAAGTGGGGGTGGCAA+TGG | + | chr3.1:5154640-5154659 | None:intergenic | 55.0% | |
| AGCTGACACCAGGTCGATCT+AGG | + | chr3.1:5155138-5155157 | None:intergenic | 55.0% | |
| ATATCCCCCATTCAGGGGAC+AGG | - | chr3.1:5152244-5152263 | MS.gene56285:intron | 55.0% | |
| ATGCAGCACCTAGATCGACC+TGG | - | chr3.1:5155127-5155146 | MS.gene56285:intron | 55.0% | |
| CAAAGGAGTCACAGTGGGGT+GGG | + | chr3.1:5155566-5155585 | None:intergenic | 55.0% | |
| GAGACTCACATTCACTGGCC+AGG | + | chr3.1:5155416-5155435 | None:intergenic | 55.0% | |
| GGCGAGGTGCAATACACTTG+TGG | + | chr3.1:5152621-5152640 | None:intergenic | 55.0% | |
| GTGGTATGGGTTCGGGTATG+TGG | + | chr3.1:5153104-5153123 | None:intergenic | 55.0% | |
| TATTGCACCTCGCCGTACAC+CGG | - | chr3.1:5152627-5152646 | MS.gene56285:CDS | 55.0% | |
| TCGGAGCCATCCGTTCAATC+CGG | - | chr3.1:5155989-5156008 | MS.gene56285:intron | 55.0% | |
| TGGACACGTTGCACCATCAG+AGG | - | chr3.1:5153835-5153854 | MS.gene56285:intron | 55.0% | |
| ! | CCTGTCGGATTTGGGACATG+CGG | - | chr3.1:5155929-5155948 | MS.gene56285:intron | 55.0% |
| ! | CTCGCGGCACTTTTGCAGAT+TGG | - | chr3.1:5152427-5152446 | MS.gene56285:intron | 55.0% |
| AGCACTCGCTAACCGGTCCA+CGG | + | chr3.1:5152405-5152424 | None:intergenic | 60.0% | |
| CACCACCATCACGTAGCACG+AGG | - | chr3.1:5153914-5153933 | MS.gene56285:CDS | 60.0% | |
| CCCATTCAGGGGACAGGTCA+GGG | - | chr3.1:5152250-5152269 | MS.gene56285:intron | 60.0% | |
| CCCTGACCTGTCCCCTGAAT+GGG | + | chr3.1:5152253-5152272 | None:intergenic | 60.0% | |
| CCGCATGTCCCAAATCCGAC+AGG | + | chr3.1:5155932-5155951 | None:intergenic | 60.0% | |
| CCTGACCTGTCCCCTGAATG+GGG | + | chr3.1:5152252-5152271 | None:intergenic | 60.0% | |
| CTGACCTGTCCCCTGAATGG+GGG | + | chr3.1:5152251-5152270 | None:intergenic | 60.0% | |
| GACCTCGTGCTACGTGATGG+TGG | + | chr3.1:5153919-5153938 | None:intergenic | 60.0% | |
| GCAAAGGAGTCACAGTGGGG+TGG | + | chr3.1:5155567-5155586 | None:intergenic | 60.0% | |
| GGCTATCCCAAGGAATCCCC+TGG | + | chr3.1:5152164-5152183 | None:intergenic | 60.0% | |
| TCCCTGACCTGTCCCCTGAA+TGG | + | chr3.1:5152254-5152273 | None:intergenic | 60.0% | |
| TGAAGTGGGGGTGGCAATGG+AGG | + | chr3.1:5154637-5154656 | None:intergenic | 60.0% | |
| TGGGGGTGGCAATGGAGGAT+GGG | + | chr3.1:5154632-5154651 | None:intergenic | 60.0% | |
| TTCAGGGGACAGGTCAGGGA+AGG | - | chr3.1:5152254-5152273 | MS.gene56285:intron | 60.0% | |
| !! | CTCGTGCTACGTGATGGTGG+TGG | + | chr3.1:5153916-5153935 | None:intergenic | 60.0% |
| CAAAGCTCCGGTGTACGGCG+AGG | + | chr3.1:5152637-5152656 | None:intergenic | 65.0% | |
| CCCCATTCAGGGGACAGGTC+AGG | - | chr3.1:5152249-5152268 | MS.gene56285:intron | 65.0% | |
| GCGAGCCAGCACTCGCTAAC+CGG | + | chr3.1:5152412-5152431 | None:intergenic | 65.0% | |
| GTGGACCGGTTAGCGAGTGC+TGG | - | chr3.1:5152404-5152423 | MS.gene56285:intron | 65.0% | |
| GTGGGGGTGGCAATGGAGGA+TGG | + | chr3.1:5154633-5154652 | None:intergenic | 65.0% | |
| !! | GGCGCCGGCCATATTCGAGA+AGG | + | chr3.1:5156197-5156216 | None:intergenic | 65.0% |
| !! | GGTTAGCGAGTGCTGGCTCG+CGG | - | chr3.1:5152411-5152430 | MS.gene56285:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 5151803 | 5156248 | 5151803 | ID=MS.gene56285 |
| chr3.1 | mRNA | 5151803 | 5156248 | 5151803 | ID=MS.gene56285.t1;Parent=MS.gene56285 |
| chr3.1 | exon | 5156102 | 5156248 | 5156102 | ID=MS.gene56285.t1.exon1;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5156102 | 5156248 | 5156102 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5155776 | 5155943 | 5155776 | ID=MS.gene56285.t1.exon2;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5155776 | 5155943 | 5155776 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5154752 | 5154838 | 5154752 | ID=MS.gene56285.t1.exon3;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5154752 | 5154838 | 5154752 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5154195 | 5154329 | 5154195 | ID=MS.gene56285.t1.exon4;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5154195 | 5154329 | 5154195 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5153901 | 5154011 | 5153901 | ID=MS.gene56285.t1.exon5;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5153901 | 5154011 | 5153901 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5152827 | 5152918 | 5152827 | ID=MS.gene56285.t1.exon6;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5152827 | 5152918 | 5152827 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5152625 | 5152730 | 5152625 | ID=MS.gene56285.t1.exon7;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5152625 | 5152730 | 5152625 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5152333 | 5152419 | 5152333 | ID=MS.gene56285.t1.exon8;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5152333 | 5152419 | 5152333 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| chr3.1 | exon | 5151803 | 5152216 | 5151803 | ID=MS.gene56285.t1.exon9;Parent=MS.gene56285.t1 |
| chr3.1 | CDS | 5151803 | 5152216 | 5151803 | ID=cds.MS.gene56285.t1;Parent=MS.gene56285.t1 |
| Gene Sequence |
| Protein sequence |
