Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51650.t1 | XP_024635317.1 | 95.3 | 448 | 20 | 1 | 1 | 448 | 1 | 447 | 4.00E-247 | 863.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51650.t1 | Q9Y7K5 | 29.0 | 383 | 245 | 10 | 66 | 444 | 66 | 425 | 2.5e-32 | 141.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51650.t1 | G7J0E2 | 95.3 | 448 | 20 | 1 | 1 | 448 | 1 | 447 | 2.9e-247 | 863.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene51650 | 0.843445 | 1.39E-58 | -1.69E-46 |
| MS.gene049378 | MS.gene51650 | 0.838353 | 3.02E-57 | -1.69E-46 |
| MS.gene049419 | MS.gene51650 | -0.870573 | 1.32E-66 | -1.69E-46 |
| MS.gene049424 | MS.gene51650 | 0.821034 | 5.00E-53 | -1.69E-46 |
| MS.gene049669 | MS.gene51650 | 0.821173 | 4.65E-53 | -1.69E-46 |
| MS.gene050105 | MS.gene51650 | 0.89977 | 1.43E-77 | -1.69E-46 |
| MS.gene050312 | MS.gene51650 | 0.811816 | 5.79E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene51650 | 0.814821 | 1.27E-51 | -1.69E-46 |
| MS.gene050508 | MS.gene51650 | 0.816699 | 4.83E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene51650 | 0.825541 | 4.43E-54 | -1.69E-46 |
| MS.gene050680 | MS.gene51650 | 0.819647 | 1.04E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene51650 | 0.828016 | 1.14E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene51650 | 0.834247 | 3.35E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene51650 | 0.810278 | 1.25E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene51650 | 0.863743 | 2.00E-64 | -1.69E-46 |
| MS.gene051368 | MS.gene51650 | 0.848894 | 4.58E-60 | -1.69E-46 |
| MS.gene051452 | MS.gene51650 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene051924 | MS.gene51650 | -0.811911 | 5.52E-51 | -1.69E-46 |
| MS.gene051926 | MS.gene51650 | -0.832792 | 7.72E-56 | -1.69E-46 |
| MS.gene051935 | MS.gene51650 | 0.811819 | 5.78E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene51650 | 0.804803 | 1.81E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene51650 | 0.809914 | 1.49E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene51650 | 0.807492 | 4.92E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene51650 | 0.854126 | 1.51E-61 | -1.69E-46 |
| MS.gene052333 | MS.gene51650 | 0.843522 | 1.33E-58 | -1.69E-46 |
| MS.gene052389 | MS.gene51650 | 0.826141 | 3.19E-54 | -1.69E-46 |
| MS.gene052426 | MS.gene51650 | 0.828545 | 8.47E-55 | -1.69E-46 |
| MS.gene052464 | MS.gene51650 | 0.804122 | 2.51E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene51650 | 0.818997 | 1.46E-52 | -1.69E-46 |
| MS.gene052502 | MS.gene51650 | 0.821319 | 4.30E-53 | -1.69E-46 |
| MS.gene052586 | MS.gene51650 | 0.820007 | 8.61E-53 | -1.69E-46 |
| MS.gene052674 | MS.gene51650 | 0.83715 | 6.16E-57 | -1.69E-46 |
| MS.gene052675 | MS.gene51650 | 0.834036 | 3.78E-56 | -1.69E-46 |
| MS.gene052677 | MS.gene51650 | 0.837975 | 3.79E-57 | -1.69E-46 |
| MS.gene052824 | MS.gene51650 | 0.810352 | 1.20E-50 | -1.69E-46 |
| MS.gene052826 | MS.gene51650 | 0.817282 | 3.58E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene51650 | 0.860373 | 2.16E-63 | -1.69E-46 |
| MS.gene053006 | MS.gene51650 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene51650 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene51650 | 0.849717 | 2.70E-60 | -1.69E-46 |
| MS.gene053188 | MS.gene51650 | 0.806497 | 7.99E-50 | -1.69E-46 |
| MS.gene053216 | MS.gene51650 | 0.826602 | 2.48E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene51650 | 0.808136 | 3.59E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene51650 | 0.825559 | 4.39E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene51650 | 0.826394 | 2.78E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene51650 | 0.877081 | 8.36E-69 | -1.69E-46 |
| MS.gene054559 | MS.gene51650 | 0.809575 | 1.77E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene51650 | 0.822948 | 1.80E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene51650 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene51650 | -0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene51650 | 0.843003 | 1.83E-58 | -1.69E-46 |
| MS.gene055225 | MS.gene51650 | 0.8451 | 5.01E-59 | -1.69E-46 |
| MS.gene055230 | MS.gene51650 | 0.854344 | 1.31E-61 | -1.69E-46 |
| MS.gene055623 | MS.gene51650 | 0.833888 | 4.12E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene51650 | 0.900945 | 4.41E-78 | -1.69E-46 |
| MS.gene055818 | MS.gene51650 | 0.836525 | 8.89E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene51650 | 0.814308 | 1.65E-51 | -1.69E-46 |
| MS.gene056064 | MS.gene51650 | 0.817145 | 3.84E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene51650 | 0.821835 | 3.27E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene51650 | 0.835046 | 2.11E-56 | -1.69E-46 |
| MS.gene056779 | MS.gene51650 | 0.826506 | 2.61E-54 | -1.69E-46 |
| MS.gene056873 | MS.gene51650 | 0.819914 | 9.04E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene51650 | 0.836082 | 1.15E-56 | -1.69E-46 |
| MS.gene057156 | MS.gene51650 | -0.878889 | 1.95E-69 | -1.69E-46 |
| MS.gene057194 | MS.gene51650 | 0.800087 | 1.70E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene51650 | 0.8326 | 8.62E-56 | -1.69E-46 |
| MS.gene057392 | MS.gene51650 | 0.800322 | 1.52E-48 | -1.69E-46 |
| MS.gene05761 | MS.gene51650 | 0.829551 | 4.83E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene51650 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene057855 | MS.gene51650 | 0.815642 | 8.33E-52 | -1.69E-46 |
| MS.gene05795 | MS.gene51650 | 0.811623 | 6.38E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene51650 | 0.826504 | 2.62E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene51650 | 0.809131 | 2.20E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene51650 | -0.832298 | 1.02E-55 | -1.69E-46 |
| MS.gene058435 | MS.gene51650 | 0.810682 | 1.02E-50 | -1.69E-46 |
| MS.gene058498 | MS.gene51650 | 0.828231 | 1.01E-54 | -1.69E-46 |
| MS.gene058500 | MS.gene51650 | 0.815568 | 8.65E-52 | -1.69E-46 |
| MS.gene058502 | MS.gene51650 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene058595 | MS.gene51650 | 0.841367 | 4.96E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene51650 | 0.816861 | 4.45E-52 | -1.69E-46 |
| MS.gene059161 | MS.gene51650 | 0.810225 | 1.28E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene51650 | 0.800661 | 1.30E-48 | -1.69E-46 |
| MS.gene059710 | MS.gene51650 | 0.860867 | 1.53E-63 | -1.69E-46 |
| MS.gene059952 | MS.gene51650 | 0.852403 | 4.72E-61 | -1.69E-46 |
| MS.gene060011 | MS.gene51650 | 0.829515 | 4.93E-55 | -1.69E-46 |
| MS.gene060297 | MS.gene51650 | 0.810331 | 1.22E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene51650 | 0.824399 | 8.24E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene51650 | 0.800749 | 1.25E-48 | -1.69E-46 |
| MS.gene060683 | MS.gene51650 | 0.839063 | 1.98E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene51650 | 0.841531 | 4.49E-58 | -1.69E-46 |
| MS.gene060803 | MS.gene51650 | 0.817741 | 2.82E-52 | -1.69E-46 |
| MS.gene060850 | MS.gene51650 | 0.827397 | 1.60E-54 | -1.69E-46 |
| MS.gene060851 | MS.gene51650 | 0.842241 | 2.92E-58 | -1.69E-46 |
| MS.gene060852 | MS.gene51650 | 0.841474 | 4.65E-58 | -1.69E-46 |
| MS.gene060879 | MS.gene51650 | 0.828836 | 7.20E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene51650 | 0.810822 | 9.52E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene51650 | 0.819148 | 1.35E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene51650 | -0.804591 | 2.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51650 | MS.gene26532 | PPI |
| MS.gene51650 | MS.gene29842 | PPI |
| MS.gene51650 | MS.gene35613 | PPI |
| MS.gene51650 | MS.gene043662 | PPI |
| MS.gene51650 | MS.gene39623 | PPI |
| MS.gene47479 | MS.gene51650 | PPI |
| MS.gene51650 | MS.gene02469 | PPI |
| MS.gene51650 | MS.gene008767 | PPI |
| MS.gene51650 | MS.gene23196 | PPI |
| MS.gene51650 | MS.gene30433 | PPI |
| MS.gene51650 | MS.gene022502 | PPI |
| MS.gene51650 | MS.gene52355 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51650.t1 | MTR_3g010010 | 98.884 | 448 | 4 | 1 | 1 | 448 | 43 | 489 | 0.0 | 920 |
| MS.gene51650.t1 | MTR_3g010010 | 98.884 | 448 | 4 | 1 | 1 | 448 | 1 | 447 | 0.0 | 920 |
| MS.gene51650.t1 | MTR_2g028050 | 73.378 | 447 | 119 | 0 | 1 | 447 | 1 | 447 | 0.0 | 684 |
| MS.gene51650.t1 | MTR_7g022190 | 66.019 | 412 | 139 | 1 | 35 | 446 | 28 | 438 | 0.0 | 596 |
| MS.gene51650.t1 | MTR_3g074070 | 58.250 | 400 | 166 | 1 | 49 | 448 | 59 | 457 | 1.22e-178 | 507 |
| MS.gene51650.t1 | MTR_3g074070 | 58.396 | 399 | 165 | 1 | 50 | 448 | 88 | 485 | 1.96e-177 | 505 |
| MS.gene51650.t1 | MTR_3g074070 | 58.105 | 401 | 166 | 2 | 49 | 448 | 59 | 458 | 2.04e-177 | 504 |
| MS.gene51650.t1 | MTR_3g010110 | 75.163 | 306 | 52 | 3 | 1 | 305 | 1 | 283 | 1.06e-159 | 453 |
| MS.gene51650.t1 | MTR_3g074070 | 59.621 | 317 | 127 | 1 | 132 | 448 | 28 | 343 | 6.92e-144 | 414 |
| MS.gene51650.t1 | MTR_3g074070 | 58.194 | 299 | 124 | 1 | 150 | 448 | 1 | 298 | 2.09e-131 | 381 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51650.t1 | AT1G55680 | 77.162 | 451 | 94 | 2 | 1 | 448 | 1 | 445 | 0.0 | 717 |
| MS.gene51650.t1 | AT3G13340 | 80.583 | 412 | 80 | 0 | 37 | 448 | 36 | 447 | 0.0 | 713 |
| MS.gene51650.t1 | AT3G13340 | 80.583 | 412 | 80 | 0 | 37 | 448 | 36 | 447 | 0.0 | 713 |
| MS.gene51650.t1 | AT3G13340 | 80.583 | 412 | 80 | 0 | 37 | 448 | 36 | 447 | 0.0 | 713 |
| MS.gene51650.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene51650.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene51650.t1 | AT5G56190 | 73.696 | 441 | 109 | 3 | 10 | 448 | 6 | 441 | 0.0 | 698 |
| MS.gene51650.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene51650.t1 | AT5G56190 | 73.696 | 441 | 109 | 3 | 10 | 448 | 6 | 441 | 0.0 | 698 |
| MS.gene51650.t1 | AT5G56190 | 72.788 | 452 | 114 | 4 | 1 | 448 | 1 | 447 | 0.0 | 698 |
| MS.gene51650.t1 | AT5G56190 | 73.696 | 441 | 109 | 3 | 10 | 448 | 27 | 462 | 0.0 | 697 |
| MS.gene51650.t1 | AT1G78070 | 54.072 | 442 | 202 | 1 | 8 | 448 | 8 | 449 | 3.31e-180 | 511 |
| MS.gene51650.t1 | AT1G36070 | 54.433 | 406 | 182 | 2 | 45 | 447 | 11 | 416 | 2.13e-168 | 480 |
| MS.gene51650.t1 | AT1G36070 | 53.771 | 411 | 187 | 2 | 40 | 447 | 7 | 417 | 3.93e-168 | 479 |
| MS.gene51650.t1 | AT1G36070 | 55.303 | 396 | 174 | 2 | 55 | 447 | 4 | 399 | 6.23e-168 | 478 |
| MS.gene51650.t1 | AT1G78070 | 59.306 | 317 | 129 | 0 | 131 | 447 | 23 | 339 | 6.47e-146 | 420 |
| MS.gene51650.t1 | AT1G78070 | 59.236 | 314 | 128 | 0 | 134 | 447 | 25 | 338 | 8.95e-145 | 417 |
| MS.gene51650.t1 | AT1G36070 | 55.705 | 298 | 132 | 0 | 150 | 447 | 1 | 298 | 3.88e-128 | 373 |
| MS.gene51650.t1 | AT1G36070 | 55.705 | 298 | 132 | 0 | 150 | 447 | 1 | 298 | 3.88e-128 | 373 |
Find 117 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACTATTGCTCCATTATC+TGG | 0.125977 | 3.4:-4866772 | MS.gene51650:CDS |
| TCTGGTTGCTGGAGGATTTC+AGG | 0.127364 | 3.4:-4868493 | MS.gene51650:CDS |
| TCTGAAGTACTCAATGTTTC+TGG | 0.174983 | 3.4:-4868789 | MS.gene51650:CDS |
| GCTTATGCAGTTGAGGAATT+TGG | 0.211449 | 3.4:-4868892 | MS.gene51650:intron |
| GAACAAGAAATTGATTTCTT+TGG | 0.221456 | 3.4:-4866508 | MS.gene51650:CDS |
| CCCTGACCTGTCCCCTGAAT+GGG | 0.249837 | 3.4:+4870340 | None:intergenic |
| ATGAAAAGGGATTCGGTATC+TGG | 0.289000 | 3.4:+4866460 | None:intergenic |
| TGCAGTTGAGGAATTTGGTT+TGG | 0.296738 | 3.4:-4868887 | MS.gene51650:intron |
| GATTTCTTTGGTGAGATATC+AGG | 0.300013 | 3.4:-4866496 | MS.gene51650:CDS |
| GAGTCAACCAACATACTTTC+AGG | 0.305096 | 3.4:+4866921 | None:intergenic |
| TATGGTAGCCTTCTCGAATA+TGG | 0.308564 | 3.4:-4866418 | MS.gene51650:CDS |
| AGGACAAAACCTGTCGGATT+TGG | 0.308920 | 3.4:-4866684 | MS.gene51650:CDS |
| CTGGTTGCTGGAGGATTTCA+GGG | 0.323770 | 3.4:-4868492 | MS.gene51650:CDS |
| AATCAAGGTATGAGTAATTA+TGG | 0.324026 | 3.4:+4866389 | None:intergenic |
| TCCCTGACCTGTCCCCTGAA+TGG | 0.330861 | 3.4:+4870339 | None:intergenic |
| TAATCTAAGTGCCCAGATAA+TGG | 0.343332 | 3.4:+4866760 | None:intergenic |
| TTCTTCCGATGGCAAGTATA+TGG | 0.344733 | 3.4:-4866590 | MS.gene51650:CDS |
| AACCCCTCCAATAGACTTCC+AGG | 0.350840 | 3.4:+4868558 | None:intergenic |
| TGGAATCAGAAACTTTGATA+TGG | 0.354680 | 3.4:-4867247 | MS.gene51650:CDS |
| TGCAGTAAAAGATAATCTTC+TGG | 0.365063 | 3.4:-4868511 | MS.gene51650:CDS |
| AAAGATAATCTTCTGGTTGC+TGG | 0.366888 | 3.4:-4868504 | MS.gene51650:CDS |
| ATGTTGGTTGACTCTCAAAA+TGG | 0.369339 | 3.4:-4866912 | MS.gene51650:CDS |
| GGACAAAACCTGTCGGATTT+GGG | 0.377449 | 3.4:-4866683 | MS.gene51650:CDS |
| CAAGTCAGTGGCAGTGTTGA+AGG | 0.422513 | 3.4:-4866644 | MS.gene51650:CDS |
| CCCCATTCAGGGGACAGGTC+AGG | 0.425032 | 3.4:-4870341 | MS.gene51650:CDS |
| CATTCACTGGCCAGGGAAAA+CGG | 0.432055 | 3.4:+4867199 | None:intergenic |
| GCAGTTGAGGAATTTGGTTT+GGG | 0.432688 | 3.4:-4868886 | MS.gene51650:intron |
| GGTAAGCTACTTCTGATTGT+TGG | 0.440890 | 3.4:-4866951 | MS.gene51650:CDS |
| GAAACATCCTGGAAGTCTAT+TGG | 0.441146 | 3.4:-4868565 | MS.gene51650:CDS |
| CTTCAACACTGCCACTGACT+TGG | 0.442971 | 3.4:+4866645 | None:intergenic |
| AAGACATCCAGGGGATTCCT+TGG | 0.444253 | 3.4:-4870436 | MS.gene51650:CDS |
| AAGAAGAGGACAAGACATCC+AGG | 0.448707 | 3.4:-4870447 | MS.gene51650:CDS |
| GGGGTTTGGGATCGTACTTA+TGG | 0.456853 | 3.4:-4866436 | MS.gene51650:CDS |
| AGCTGACACCAGGTCGATCT+AGG | 0.458539 | 3.4:+4867469 | None:intergenic |
| GATCCCAAACCCCAATGAAA+AGG | 0.464205 | 3.4:+4866446 | None:intergenic |
| CGGAAGAATGCCGGATTGAA+CGG | 0.464795 | 3.4:+4866605 | None:intergenic |
| ATTATTCATTCGCATCATCA+TGG | 0.467805 | 3.4:-4866741 | MS.gene51650:CDS |
| GAGGATGAAATTGATATTGA+TGG | 0.475862 | 3.4:-4870724 | MS.gene51650:CDS |
| GAGAAAGGTATCGGCAAACT+AGG | 0.482881 | 3.4:-4870394 | MS.gene51650:CDS |
| GTAGCAAAGGTTACCCCATC+GGG | 0.483017 | 3.4:+4866715 | None:intergenic |
| ATCCCAAACCCCAATGAAAA+GGG | 0.484751 | 3.4:+4866447 | None:intergenic |
| ATCAGAAGTAGCTTACCATC+TGG | 0.484849 | 3.4:+4866957 | None:intergenic |
| AACCCCAATGAAAAGGGATT+CGG | 0.487207 | 3.4:+4866453 | None:intergenic |
| AGTTTGCCGATACCTTTCTC+TGG | 0.487413 | 3.4:+4870397 | None:intergenic |
| GAGACTCACATTCACTGGCC+AGG | 0.487504 | 3.4:+4867191 | None:intergenic |
| GATGGGGTAACCTTTGCTAC+TGG | 0.493849 | 3.4:-4866712 | MS.gene51650:CDS |
| GGCTATCCCAAGGAATCCCC+TGG | 0.505261 | 3.4:+4870429 | None:intergenic |
| CCCATTCAGGGGACAGGTCA+GGG | 0.514571 | 3.4:-4870340 | MS.gene51650:CDS |
| ACCTTTCTCTGGTGATGCTA+AGG | 0.517839 | 3.4:+4870408 | None:intergenic |
| AGACTATTGCTCCATTATCT+GGG | 0.519813 | 3.4:-4866771 | MS.gene51650:CDS |
| GCAATTAAATCATTGAATCA+AGG | 0.521945 | 3.4:+4866374 | None:intergenic |
| ACAGCATCAAATAATGATTG+TGG | 0.525146 | 3.4:-4867267 | MS.gene51650:CDS |
| GTCATAAATCTCAATGGCAT+TGG | 0.527036 | 3.4:+4867410 | None:intergenic |
| CCTGACCTGTCCCCTGAATG+GGG | 0.532977 | 3.4:+4870341 | None:intergenic |
| TCCAAGAGACTCACATTCAC+TGG | 0.540290 | 3.4:+4867186 | None:intergenic |
| GTCCTGGTTTCCAGTAGCAA+AGG | 0.540720 | 3.4:+4866702 | None:intergenic |
| AGACATCCAGGGGATTCCTT+GGG | 0.540725 | 3.4:-4870435 | MS.gene51650:CDS |
| TCGGAGCCATCCGTTCAATC+CGG | 0.541521 | 3.4:-4866615 | MS.gene51650:CDS |
| TCAGGGTGAACTTATTTGCA+AGG | 0.543023 | 3.4:-4868475 | MS.gene51650:intron |
| CCGCATGTCCCAAATCCGAC+AGG | 0.548918 | 3.4:+4866675 | None:intergenic |
| ACTTGCCATCGGAAGAATGC+CGG | 0.550082 | 3.4:+4866596 | None:intergenic |
| TCAATCCGGCATTCTTCCGA+TGG | 0.550539 | 3.4:-4866601 | MS.gene51650:CDS |
| AAAGGGTTATTCACCTCTGA+TGG | 0.553941 | 3.4:+4868756 | None:intergenic |
| GCCTTAGCATCACCAGAGAA+AGG | 0.557742 | 3.4:-4870409 | MS.gene51650:CDS |
| GAGTACTTCAGAACTTGTGC+AGG | 0.558524 | 3.4:+4868800 | None:intergenic |
| AACCTTTGCTACTGGAAACC+AGG | 0.567978 | 3.4:-4866704 | MS.gene51650:CDS |
| TATACATGCACAAAATCTGC+AGG | 0.568505 | 3.4:+4866556 | None:intergenic |
| AGACTCACATTCACTGGCCA+GGG | 0.568609 | 3.4:+4867192 | None:intergenic |
| ACATCCTGGAAGTCTATTGG+AGG | 0.572776 | 3.4:-4868562 | MS.gene51650:CDS |
| AGGTGAGTCATAAATCTCAA+TGG | 0.572927 | 3.4:+4867404 | None:intergenic |
| CACAGTTCTCAGTGACACAC+TGG | 0.574143 | 3.4:-4868833 | MS.gene51650:CDS |
| CATCATCATGGAATCCCGAT+GGG | 0.574164 | 3.4:-4866729 | MS.gene51650:CDS |
| AGTAGCAAAGGTTACCCCAT+CGG | 0.575325 | 3.4:+4866714 | None:intergenic |
| TTCAGGGGACAGGTCAGGGA+AGG | 0.578143 | 3.4:-4870336 | MS.gene51650:intron |
| GCATCACCAGAGAAAGGTAT+CGG | 0.579593 | 3.4:-4870403 | MS.gene51650:CDS |
| GATAATCTTCTGGTTGCTGG+AGG | 0.580685 | 3.4:-4868501 | MS.gene51650:CDS |
| GCAGTGTTGAAGGGAAATCT+CGG | 0.584746 | 3.4:-4866634 | MS.gene51650:CDS |
| GGTGAATCTATTAATAGAGA+GGG | 0.585636 | 3.4:-4870703 | MS.gene51650:CDS |
| AGAATGCCGGATTGAACGGA+TGG | 0.586242 | 3.4:+4866609 | None:intergenic |
| AAGTCAGTGGCAGTGTTGAA+GGG | 0.588027 | 3.4:-4866643 | MS.gene51650:CDS |
| AATATTCAGCATCACCACCT+TGG | 0.588906 | 3.4:+4870776 | None:intergenic |
| CATGTATATGACGTGAAAAG+TGG | 0.589414 | 3.4:-4866541 | MS.gene51650:CDS |
| TCACTGAGAACTGTGACATA+AGG | 0.591263 | 3.4:+4868841 | None:intergenic |
| TGGTGAATCTATTAATAGAG+AGG | 0.592341 | 3.4:-4870704 | MS.gene51650:CDS |
| CTTGAGCAAAAGCTGACACC+AGG | 0.594740 | 3.4:+4867459 | None:intergenic |
| CATACTTCTCTCAGTCCAGA+TGG | 0.594886 | 3.4:-4866972 | MS.gene51650:CDS |
| TGGACACGTTGCACCATCAG+AGG | 0.597064 | 3.4:-4868769 | MS.gene51650:intron |
| ACAGCTGCTCAAGCAAGAAG+AGG | 0.600613 | 3.4:-4870461 | MS.gene51650:CDS |
| CATCCTGGAAGTCTATTGGA+GGG | 0.605352 | 3.4:-4868561 | MS.gene51650:CDS |
| GATTGTAAAAGCACGGACAA+AGG | 0.607503 | 3.4:-4869387 | MS.gene51650:CDS |
| GGTATGAGTAATTATGGCGC+CGG | 0.607817 | 3.4:+4866395 | None:intergenic |
| GCATCATCATGGAATCCCGA+TGG | 0.607878 | 3.4:-4866730 | MS.gene51650:CDS |
| GGTTGACTCTCAAAATGGAA+AGG | 0.608076 | 3.4:-4866907 | MS.gene51650:intron |
| GAAAATATGTCTCATCGCCA+AGG | 0.610938 | 3.4:-4870793 | None:intergenic |
| TTGAGATTTATGACTCACCT+AGG | 0.613462 | 3.4:-4867401 | MS.gene51650:intron |
| GTAGCCTTCTCGAATATGGC+CGG | 0.615508 | 3.4:-4866414 | MS.gene51650:CDS |
| TGCGGATGAATATGAAATGG+AGG | 0.616643 | 3.4:-4870752 | MS.gene51650:CDS |
| CTGACCTGTCCCCTGAATGG+GGG | 0.619493 | 3.4:+4870342 | None:intergenic |
| AGAAGAGGACAAGACATCCA+GGG | 0.624570 | 3.4:-4870446 | MS.gene51650:CDS |
| CAAACAGGATTGTAAAAGCA+CGG | 0.625588 | 3.4:-4869394 | MS.gene51650:intron |
| TGTAGATGAATATGATTACT+CGG | 0.633196 | 3.4:-4870662 | MS.gene51650:intron |
| ATCCTGGAAGTCTATTGGAG+GGG | 0.633313 | 3.4:-4868560 | MS.gene51650:CDS |
| ATATTCATCTACATCAGACT+CGG | 0.638509 | 3.4:+4870672 | None:intergenic |
| ATATGAAATGGAGGATGTAG+AGG | 0.641938 | 3.4:-4870743 | MS.gene51650:CDS |
| GAATCTATTAATAGAGAGGG+AGG | 0.642631 | 3.4:-4870700 | MS.gene51650:CDS |
| CCTGTCGGATTTGGGACATG+CGG | 0.645322 | 3.4:-4866675 | MS.gene51650:CDS |
| AGACAATCCTGAAAGTATGT+TGG | 0.648208 | 3.4:-4866928 | MS.gene51650:CDS |
| TATAGCCATATACTTGCCAT+CGG | 0.653031 | 3.4:+4866585 | None:intergenic |
| GCGGAATTTATCCAAGTCAG+TGG | 0.655008 | 3.4:-4866656 | MS.gene51650:CDS |
| GGCGCCGGCCATATTCGAGA+AGG | 0.664131 | 3.4:+4866410 | None:intergenic |
| GAAGAGGACAAGACATCCAG+GGG | 0.669643 | 3.4:-4870445 | MS.gene51650:CDS |
| ATGCAGCACCTAGATCGACC+TGG | 0.674184 | 3.4:-4867477 | MS.gene51650:intron |
| ATGTATATGACGTGAAAAGT+GGG | 0.674883 | 3.4:-4866540 | MS.gene51650:CDS |
| ATCATCATGGAATCCCGATG+GGG | 0.681047 | 3.4:-4866728 | MS.gene51650:CDS |
| GAAACCAGGACAAAACCTGT+CGG | 0.683580 | 3.4:-4866690 | MS.gene51650:CDS |
| GTGATGCTAAGGCTATCCCA+AGG | 0.695903 | 3.4:+4870419 | None:intergenic |
| AATATGTCTCATCGCCAAGG+TGG | 0.738255 | 3.4:-4870790 | MS.gene51650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAACTATAAAAAAAC+AGG | + | chr3.4:4869578-4869597 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATAATGGATAT+TGG | - | chr3.4:4869818-4869837 | MS.gene51650:intron | 10.0% |
| !! | AGCATAAAAAAAAAAAAAAG+AGG | + | chr3.4:4868256-4868275 | None:intergenic | 15.0% |
| !! | ATAAATAAGATTTATGTTCT+GGG | - | chr3.4:4869265-4869284 | MS.gene51650:intron | 15.0% |
| !! | GCATAAAAAAAAAAAAAAGA+GGG | + | chr3.4:4868255-4868274 | None:intergenic | 15.0% |
| !! | TATAAATAAGATTTATGTTC+TGG | - | chr3.4:4869264-4869283 | MS.gene51650:intron | 15.0% |
| !! | TATCAAAATAATTAAAGAGA+AGG | + | chr3.4:4869801-4869820 | None:intergenic | 15.0% |
| !! | TATTATTATCTATATCAAAC+AGG | - | chr3.4:4867756-4867775 | MS.gene51650:intron | 15.0% |
| !! | TGATATAGATAATAATAAAC+AGG | + | chr3.4:4867753-4867772 | None:intergenic | 15.0% |
| !!! | TCTGAAATATCAAAAAAAAA+AGG | + | chr3.4:4866868-4866887 | None:intergenic | 15.0% |
| !! | AAAACATAAAACAAATCCTA+TGG | + | chr3.4:4869623-4869642 | None:intergenic | 20.0% |
| !! | AAACATAAAACAAATCCTAT+GGG | + | chr3.4:4869622-4869641 | None:intergenic | 20.0% |
| !! | ATAACTACAATATTACTCAT+AGG | + | chr3.4:4866655-4866674 | None:intergenic | 20.0% |
| !! | CTAAAATTGTTCATTTAAGA+GGG | + | chr3.4:4870033-4870052 | None:intergenic | 20.0% |
| !! | CTTAAAATTGTGAGATATTT+AGG | + | chr3.4:4869322-4869341 | None:intergenic | 20.0% |
| !! | TAAAATTGTTCATTTAAGAG+GGG | + | chr3.4:4870032-4870051 | None:intergenic | 20.0% |
| !! | TATGAGTAATATTGTAGTTA+TGG | - | chr3.4:4866654-4866673 | MS.gene51650:CDS | 20.0% |
| !! | TGATGAATTATTTACTTAGA+AGG | + | chr3.4:4866604-4866623 | None:intergenic | 20.0% |
| !!! | AAATGAACAATTTTAGCATT+AGG | - | chr3.4:4870037-4870056 | MS.gene51650:intron | 20.0% |
| !!! | TTTTCAGGTAATATTGTAAA+AGG | - | chr3.4:4868927-4868946 | MS.gene51650:intron | 20.0% |
| !!! | TTTTTCATTCATGTTATCTA+TGG | - | chr3.4:4869485-4869504 | MS.gene51650:intron | 20.0% |
| ! | AAATATAATCGCTATGACAT+AGG | - | chr3.4:4867444-4867463 | MS.gene51650:CDS | 25.0% |
| ! | AACATAAAACAAATCCTATG+GGG | + | chr3.4:4869621-4869640 | None:intergenic | 25.0% |
| ! | AACTTCTTTAATCATGTCAT+TGG | - | chr3.4:4866892-4866911 | MS.gene51650:intron | 25.0% |
| ! | AATAATAAACAGGTAAGCAT+AGG | + | chr3.4:4867743-4867762 | None:intergenic | 25.0% |
| ! | AATATAATCGCTATGACATA+GGG | - | chr3.4:4867445-4867464 | MS.gene51650:CDS | 25.0% |
| ! | AATCAAGGTATGAGTAATTA+TGG | + | chr3.4:4870779-4870798 | None:intergenic | 25.0% |
| ! | AGTAGATAAGAAAAACATAG+AGG | + | chr3.4:4867260-4867279 | None:intergenic | 25.0% |
| ! | ATAATACTAAGTATATCTCC+TGG | + | chr3.4:4867401-4867420 | None:intergenic | 25.0% |
| ! | ATGTTTATATCATAGTCATC+TGG | + | chr3.4:4867718-4867737 | None:intergenic | 25.0% |
| ! | ATTGATTATTTGACCGAAAA+GGG | + | chr3.4:4870296-4870315 | None:intergenic | 25.0% |
| ! | GCTAAAATTGTTCATTTAAG+AGG | + | chr3.4:4870034-4870053 | None:intergenic | 25.0% |
| ! | GGAATATAAATAGAAAGCAA+AGG | + | chr3.4:4870144-4870163 | None:intergenic | 25.0% |
| ! | GTGTGTTAAATCAATAATCA+CGG | + | chr3.4:4869846-4869865 | None:intergenic | 25.0% |
| ! | TGAATTATTTACTTAGAAGG+AGG | + | chr3.4:4866601-4866620 | None:intergenic | 25.0% |
| ! | TGTAGATGAATATGATTACT+CGG | - | chr3.4:4866503-4866522 | MS.gene51650:CDS | 25.0% |
| ! | TGTCAGAAAAATTTATCTTG+TGG | - | chr3.4:4868021-4868040 | MS.gene51650:intron | 25.0% |
| ! | TGTTATGAATATGATGTACA+TGG | - | chr3.4:4866567-4866586 | MS.gene51650:CDS | 25.0% |
| ! | TTATGCTCAATTAAAACAGA+TGG | + | chr3.4:4867072-4867091 | None:intergenic | 25.0% |
| ! | TTCAGTAACAAAGAAAGTAA+TGG | + | chr3.4:4869668-4869687 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTGAGATATCAC+TGG | - | chr3.4:4867168-4867187 | MS.gene51650:intron | 25.0% |
| ! | TTTCATCTATGTAAAGATAC+TGG | - | chr3.4:4868962-4868981 | MS.gene51650:intron | 25.0% |
| !! | ATCAACAATTCTTCATTTTC+AGG | - | chr3.4:4867843-4867862 | MS.gene51650:intron | 25.0% |
| !! | ATGAGCATTGCTTTAATAAT+TGG | - | chr3.4:4869378-4869397 | MS.gene51650:CDS | 25.0% |
| !! | GAACAAGAAATTGATTTCTT+TGG | - | chr3.4:4870657-4870676 | MS.gene51650:intron | 25.0% |
| !! | GATACTCATTTTATGAGTTT+AGG | - | chr3.4:4867800-4867819 | MS.gene51650:intron | 25.0% |
| !!! | AAGATTTTGACGTTGATTAA+AGG | + | chr3.4:4868993-4869012 | None:intergenic | 25.0% |
| !!! | AAGTAAAAGCATTAGGTAAA+GGG | + | chr3.4:4868429-4868448 | None:intergenic | 25.0% |
| !!! | ACGATTTTTAGCATTTTCTT+AGG | + | chr3.4:4867321-4867340 | None:intergenic | 25.0% |
| !!! | AGATTTTGACGTTGATTAAA+GGG | + | chr3.4:4868992-4869011 | None:intergenic | 25.0% |
| !!! | AGTCATCATTTTTGTAAAAG+AGG | + | chr3.4:4869070-4869089 | None:intergenic | 25.0% |
| !!! | ATAATCTCTACTTTGTTTTG+TGG | - | chr3.4:4868742-4868761 | MS.gene51650:intron | 25.0% |
| !!! | ATATCTCACTTTTTAAAGCA+AGG | + | chr3.4:4867165-4867184 | None:intergenic | 25.0% |
| !!! | GCATTTTTTTAAATCTGTTG+TGG | - | chr3.4:4868770-4868789 | MS.gene51650:CDS | 25.0% |
| AAAAAACAGGTAGAGTCTAA+TGG | + | chr3.4:4869565-4869584 | None:intergenic | 30.0% | |
| AAAAACAGGTAGAGTCTAAT+GGG | + | chr3.4:4869564-4869583 | None:intergenic | 30.0% | |
| ACAGCATCAAATAATGATTG+TGG | - | chr3.4:4869898-4869917 | MS.gene51650:intron | 30.0% | |
| ACATAAAACAAATCCTATGG+GGG | + | chr3.4:4869620-4869639 | None:intergenic | 30.0% | |
| AGAAGGAAAACTAAATACCT+AGG | + | chr3.4:4869784-4869803 | None:intergenic | 30.0% | |
| AGCATTGCTTTAATAATTGG+TGG | - | chr3.4:4869381-4869400 | MS.gene51650:CDS | 30.0% | |
| ATATAATCGCTATGACATAG+GGG | - | chr3.4:4867446-4867465 | MS.gene51650:CDS | 30.0% | |
| ATATTCATCTACATCAGACT+CGG | + | chr3.4:4866496-4866515 | None:intergenic | 30.0% | |
| ATGTATATGACGTGAAAAGT+GGG | - | chr3.4:4870625-4870644 | MS.gene51650:intron | 30.0% | |
| ATTATTCATTCGCATCATCA+TGG | - | chr3.4:4870424-4870443 | MS.gene51650:CDS | 30.0% | |
| CAGATTCCTTTCATGAAATT+GGG | + | chr3.4:4867031-4867050 | None:intergenic | 30.0% | |
| CATTATGTTCAAATGTTTCG+CGG | + | chr3.4:4868831-4868850 | None:intergenic | 30.0% | |
| GACAGTAAAATACTTGATTG+CGG | - | chr3.4:4868043-4868062 | MS.gene51650:intron | 30.0% | |
| GAGGATGAAATTGATATTGA+TGG | - | chr3.4:4866441-4866460 | MS.gene51650:CDS | 30.0% | |
| GAGTAATATTGTAGTTATGG+TGG | - | chr3.4:4866657-4866676 | MS.gene51650:CDS | 30.0% | |
| GATTGATTATTTGACCGAAA+AGG | + | chr3.4:4870297-4870316 | None:intergenic | 30.0% | |
| GGTGAATCTATTAATAGAGA+GGG | - | chr3.4:4866462-4866481 | MS.gene51650:CDS | 30.0% | |
| TAGCATAAAAAGGCAAAGAT+AGG | + | chr3.4:4870165-4870184 | None:intergenic | 30.0% | |
| TATCTATGGTTCAGCTAATT+AGG | - | chr3.4:4869499-4869518 | MS.gene51650:intron | 30.0% | |
| TGAGAAGTAGCTAAAAACTA+AGG | + | chr3.4:4869447-4869466 | None:intergenic | 30.0% | |
| TGCAGTAAAAGATAATCTTC+TGG | - | chr3.4:4868654-4868673 | MS.gene51650:intron | 30.0% | |
| TGGAATCAGAAACTTTGATA+TGG | - | chr3.4:4869918-4869937 | MS.gene51650:intron | 30.0% | |
| TGGTGAATCTATTAATAGAG+AGG | - | chr3.4:4866461-4866480 | MS.gene51650:CDS | 30.0% | |
| TTGAAATTGTATAGACCACA+TGG | - | chr3.4:4869346-4869365 | MS.gene51650:CDS | 30.0% | |
| TTTAACTACTACACTTGCAT+TGG | - | chr3.4:4867131-4867150 | MS.gene51650:intron | 30.0% | |
| ! | AGCTTTGTAGGTATATTTGA+GGG | + | chr3.4:4867623-4867642 | None:intergenic | 30.0% |
| ! | AGTTCTGCATATGCATATTT+TGG | - | chr3.4:4869529-4869548 | MS.gene51650:intron | 30.0% |
| ! | ATCTACTCTGGTTTCTATAA+TGG | - | chr3.4:4867881-4867900 | MS.gene51650:intron | 30.0% |
| ! | TTTTATTGTCAGAAACATCC+TGG | - | chr3.4:4868589-4868608 | MS.gene51650:intron | 30.0% |
| ! | TTTTGCGGATGAATATGAAA+TGG | - | chr3.4:4866410-4866429 | MS.gene51650:CDS | 30.0% |
| ! | TTTTTATGCTTATGCAGTTG+AGG | - | chr3.4:4868266-4868285 | MS.gene51650:intron | 30.0% |
| !! | AAGTAATGGATGTATATCAG+CGG | + | chr3.4:4869654-4869673 | None:intergenic | 30.0% |
| !! | ATCATTTTTGTAAAAGAGGC+TGG | + | chr3.4:4869066-4869085 | None:intergenic | 30.0% |
| !! | CAAGTAAAAGCATTAGGTAA+AGG | + | chr3.4:4868430-4868449 | None:intergenic | 30.0% |
| !! | CTGGTTTCTATAATGGATTA+AGG | - | chr3.4:4867888-4867907 | MS.gene51650:intron | 30.0% |
| !! | TGGTAATGAGTAACTTTTTC+AGG | - | chr3.4:4868912-4868931 | MS.gene51650:intron | 30.0% |
| !!! | ATAGTCGATACGTCTTTTTT+TGG | - | chr3.4:4867516-4867535 | MS.gene51650:intron | 30.0% |
| !!! | TAGTTTTTAGCTACTTCTCA+AGG | - | chr3.4:4869447-4869466 | MS.gene51650:intron | 30.0% |
| AAAACTAAGGCTCGAATTGA+AGG | + | chr3.4:4869434-4869453 | None:intergenic | 35.0% | |
| AAATTGTGCAGTCTGTTCAT+AGG | - | chr3.4:4868156-4868175 | MS.gene51650:intron | 35.0% | |
| AGACTATTGCTCCATTATCT+GGG | - | chr3.4:4870394-4870413 | MS.gene51650:CDS | 35.0% | |
| AGGAAAAAATGTCGCAATCA+AGG | + | chr3.4:4867301-4867320 | None:intergenic | 35.0% | |
| AGGAAACATTGCTTACACTT+AGG | - | chr3.4:4870057-4870076 | MS.gene51650:intron | 35.0% | |
| AGGTGAGTCATAAATCTCAA+TGG | + | chr3.4:4869764-4869783 | None:intergenic | 35.0% | |
| ATAGAAACCAGAGTAGATAC+AGG | + | chr3.4:4867879-4867898 | None:intergenic | 35.0% | |
| ATATGAAATGGAGGATGTAG+AGG | - | chr3.4:4866422-4866441 | MS.gene51650:CDS | 35.0% | |
| ATGAAAATATCCCCCATTCA+GGG | - | chr3.4:4866813-4866832 | MS.gene51650:intron | 35.0% | |
| ATGAGGCTGTTAATATCATG+TGG | + | chr3.4:4869120-4869139 | None:intergenic | 35.0% | |
| CAAACAGGATTGTAAAAGCA+CGG | - | chr3.4:4867771-4867790 | MS.gene51650:intron | 35.0% | |
| CATGTATATGACGTGAAAAG+TGG | - | chr3.4:4870624-4870643 | MS.gene51650:intron | 35.0% | |
| CTTTGTAGGTATATTTGAGG+GGG | + | chr3.4:4867621-4867640 | None:intergenic | 35.0% | |
| GAATCTATTAATAGAGAGGG+AGG | - | chr3.4:4866465-4866484 | MS.gene51650:CDS | 35.0% | |
| GATTTCTTTGGTGAGATATC+AGG | - | chr3.4:4870669-4870688 | MS.gene51650:CDS | 35.0% | |
| GCAGATTCCTTTCATGAAAT+TGG | + | chr3.4:4867032-4867051 | None:intergenic | 35.0% | |
| GCTCATTAAATAGTTCCATG+TGG | + | chr3.4:4869364-4869383 | None:intergenic | 35.0% | |
| GCTTTGTAGGTATATTTGAG+GGG | + | chr3.4:4867622-4867641 | None:intergenic | 35.0% | |
| GTCATAAATCTCAATGGCAT+TGG | + | chr3.4:4869758-4869777 | None:intergenic | 35.0% | |
| GTGGTGCAACATGATTTAAA+GGG | + | chr3.4:4868458-4868477 | None:intergenic | 35.0% | |
| TAATCTAAGTGCCCAGATAA+TGG | + | chr3.4:4870408-4870427 | None:intergenic | 35.0% | |
| TAGGACATTTAACTGCACAA+TGG | - | chr3.4:4867917-4867936 | MS.gene51650:intron | 35.0% | |
| TATACATGCACAAAATCTGC+AGG | + | chr3.4:4870612-4870631 | None:intergenic | 35.0% | |
| TATAGCCATATACTTGCCAT+CGG | + | chr3.4:4870583-4870602 | None:intergenic | 35.0% | |
| TATGAAAATATCCCCCATTC+AGG | - | chr3.4:4866812-4866831 | MS.gene51650:intron | 35.0% | |
| TCCAATTTCGATGCTATATG+AGG | + | chr3.4:4869137-4869156 | None:intergenic | 35.0% | |
| TGTTCATTTAAGAGGGGATA+GGG | + | chr3.4:4870026-4870045 | None:intergenic | 35.0% | |
| TTGAGATTTATGACTCACCT+AGG | - | chr3.4:4869764-4869783 | MS.gene51650:intron | 35.0% | |
| TTGATTTAACACACCTTTCC+TGG | - | chr3.4:4869852-4869871 | MS.gene51650:intron | 35.0% | |
| TTGTTCATTTAAGAGGGGAT+AGG | + | chr3.4:4870027-4870046 | None:intergenic | 35.0% | |
| ! | AAAGATAATCTTCTGGTTGC+TGG | - | chr3.4:4868661-4868680 | MS.gene51650:intron | 35.0% |
| ! | AGACAATCCTGAAAGTATGT+TGG | - | chr3.4:4870237-4870256 | MS.gene51650:intron | 35.0% |
| ! | ATACCGAATCCCTTTTCATT+GGG | - | chr3.4:4870709-4870728 | MS.gene51650:CDS | 35.0% |
| ! | ATCGAAATTGGATGATGATG+TGG | - | chr3.4:4869145-4869164 | MS.gene51650:intron | 35.0% |
| ! | ATGTTGGTTGACTCTCAAAA+TGG | - | chr3.4:4870253-4870272 | MS.gene51650:intron | 35.0% |
| ! | ATTCTTTTCAGTGTGTGGTA+TGG | + | chr3.4:4867689-4867708 | None:intergenic | 35.0% |
| ! | ATTTTTGTAAAAGAGGCTGG+CGG | + | chr3.4:4869063-4869082 | None:intergenic | 35.0% |
| ! | GAGCTTTGTAGGTATATTTG+AGG | + | chr3.4:4867624-4867643 | None:intergenic | 35.0% |
| ! | TCACAATTCTTTTCAGTGTG+TGG | + | chr3.4:4867694-4867713 | None:intergenic | 35.0% |
| ! | TCTGAAGTACTCAATGTTTC+TGG | - | chr3.4:4868376-4868395 | MS.gene51650:intron | 35.0% |
| ! | TTCTTTTCAGTGTGTGGTAT+GGG | + | chr3.4:4867688-4867707 | None:intergenic | 35.0% |
| !! | AAGGATTGGTTTGCAACTAA+GGG | + | chr3.4:4867368-4867387 | None:intergenic | 35.0% |
| !! | GCTATGCAAGTAAAAGCATT+AGG | + | chr3.4:4868436-4868455 | None:intergenic | 35.0% |
| !! | TAAGGATTGGTTTGCAACTA+AGG | + | chr3.4:4867369-4867388 | None:intergenic | 35.0% |
| !! | TAATGGATTAAGGATGCACT+AGG | - | chr3.4:4867898-4867917 | MS.gene51650:intron | 35.0% |
| !! | TGGTGATGCTGAATATTTTG+CGG | - | chr3.4:4866395-4866414 | MS.gene51650:CDS | 35.0% |
| AAAGGGTTATTCACCTCTGA+TGG | + | chr3.4:4868412-4868431 | None:intergenic | 40.0% | |
| AACCCCAATGAAAAGGGATT+CGG | + | chr3.4:4870715-4870734 | None:intergenic | 40.0% | |
| AATATTCAGCATCACCACCT+TGG | + | chr3.4:4866392-4866411 | None:intergenic | 40.0% | |
| AATGGATGTATATCAGCGGA+TGG | + | chr3.4:4869650-4869669 | None:intergenic | 40.0% | |
| AATTGTTAGCGAGAACTGTG+AGG | - | chr3.4:4868095-4868114 | MS.gene51650:intron | 40.0% | |
| ACAGCAAACAAAGTGAAGTG+GGG | + | chr3.4:4869211-4869230 | None:intergenic | 40.0% | |
| ATCAGAAGTAGCTTACCATC+TGG | + | chr3.4:4870211-4870230 | None:intergenic | 40.0% | |
| ATCCCAAACCCCAATGAAAA+GGG | + | chr3.4:4870721-4870740 | None:intergenic | 40.0% | |
| ATCGACTATGTATACCCCAA+TGG | + | chr3.4:4867505-4867524 | None:intergenic | 40.0% | |
| CACAGCAAACAAAGTGAAGT+GGG | + | chr3.4:4869212-4869231 | None:intergenic | 40.0% | |
| CAGACTATTGCTCCATTATC+TGG | - | chr3.4:4870393-4870412 | MS.gene51650:CDS | 40.0% | |
| CAGAGACTTAGGACTTTACA+GGG | + | chr3.4:4869027-4869046 | None:intergenic | 40.0% | |
| GAAACATCCTGGAAGTCTAT+TGG | - | chr3.4:4868600-4868619 | MS.gene51650:intron | 40.0% | |
| GAGTCAACCAACATACTTTC+AGG | + | chr3.4:4870247-4870266 | None:intergenic | 40.0% | |
| GCTGTTAATATCATGTGGCA+TGG | + | chr3.4:4869115-4869134 | None:intergenic | 40.0% | |
| GCTTATGCAGTTGAGGAATT+TGG | - | chr3.4:4868273-4868292 | MS.gene51650:intron | 40.0% | |
| GGTAAGCTACTTCTGATTGT+TGG | - | chr3.4:4870214-4870233 | MS.gene51650:intron | 40.0% | |
| GGTGGTGCAACATGATTTAA+AGG | + | chr3.4:4868459-4868478 | None:intergenic | 40.0% | |
| TACACTTAGGCTGTACTGTA+TGG | - | chr3.4:4870070-4870089 | MS.gene51650:intron | 40.0% | |
| TAGAGTGTAGAACAAAGCTC+CGG | + | chr3.4:4867223-4867242 | None:intergenic | 40.0% | |
| TATGGTAGCCTTCTCGAATA+TGG | - | chr3.4:4870747-4870766 | MS.gene51650:CDS | 40.0% | |
| TCACTGAGAACTGTGACATA+AGG | + | chr3.4:4868327-4868346 | None:intergenic | 40.0% | |
| TCAGGGTGAACTTATTTGCA+AGG | - | chr3.4:4868690-4868709 | MS.gene51650:intron | 40.0% | |
| TCCGCCACTAAATACTTTGA+GGG | - | chr3.4:4867642-4867661 | MS.gene51650:intron | 40.0% | |
| TGAAAATATCCCCCATTCAG+GGG | - | chr3.4:4866814-4866833 | MS.gene51650:intron | 40.0% | |
| TGCAGTTGAGGAATTTGGTT+TGG | - | chr3.4:4868278-4868297 | MS.gene51650:intron | 40.0% | |
| TGCGGATGAATATGAAATGG+AGG | - | chr3.4:4866413-4866432 | MS.gene51650:CDS | 40.0% | |
| TGCTGCAGCATAGCATAAAA+AGG | + | chr3.4:4870175-4870194 | None:intergenic | 40.0% | |
| TGTGAATCTTGAGTAGTACC+TGG | - | chr3.4:4868180-4868199 | MS.gene51650:intron | 40.0% | |
| TGTGGTGAATTACGTAACGA+TGG | + | chr3.4:4866944-4866963 | None:intergenic | 40.0% | |
| TTCTTCCGATGGCAAGTATA+TGG | - | chr3.4:4870575-4870594 | MS.gene51650:intron | 40.0% | |
| ! | AATCCCTTTTCATTGGGGTT+TGG | - | chr3.4:4870715-4870734 | MS.gene51650:CDS | 40.0% |
| ! | ACCCTCAAAGTATTTAGTGG+CGG | + | chr3.4:4867646-4867665 | None:intergenic | 40.0% |
| ! | ATCCCTTTTCATTGGGGTTT+GGG | - | chr3.4:4870716-4870735 | MS.gene51650:CDS | 40.0% |
| ! | ATGAAAAGGGATTCGGTATC+TGG | + | chr3.4:4870708-4870727 | None:intergenic | 40.0% |
| ! | GATACCGAATCCCTTTTCAT+TGG | - | chr3.4:4870708-4870727 | MS.gene51650:CDS | 40.0% |
| ! | GATTGTAAAAGCACGGACAA+AGG | - | chr3.4:4867778-4867797 | MS.gene51650:intron | 40.0% |
| ! | GCAACCCTCAAAGTATTTAG+TGG | + | chr3.4:4867649-4867668 | None:intergenic | 40.0% |
| ! | GCAGTTGAGGAATTTGGTTT+GGG | - | chr3.4:4868279-4868298 | MS.gene51650:intron | 40.0% |
| ! | GCCTCATATAGCATCGAAAT+TGG | - | chr3.4:4869133-4869152 | MS.gene51650:intron | 40.0% |
| ! | GGTTGACTCTCAAAATGGAA+AGG | - | chr3.4:4870258-4870277 | MS.gene51650:intron | 40.0% |
| ! | TACCGAATCCCTTTTCATTG+GGG | - | chr3.4:4870710-4870729 | MS.gene51650:CDS | 40.0% |
| !! | AGGATTGGTTTGCAACTAAG+GGG | + | chr3.4:4867367-4867386 | None:intergenic | 40.0% |
| !!! | GTCGATACGTCTTTTTTTGG+TGG | - | chr3.4:4867519-4867538 | MS.gene51650:intron | 40.0% |
| AAAGCAAAGGAGTCACAGTG+GGG | + | chr3.4:4870131-4870150 | None:intergenic | 45.0% | |
| AACCTTTGCTACTGGAAACC+AGG | - | chr3.4:4870461-4870480 | MS.gene51650:CDS | 45.0% | |
| AAGAAGAGGACAAGACATCC+AGG | - | chr3.4:4866718-4866737 | MS.gene51650:CDS | 45.0% | |
| AAGTATATCTCCTGGCGTAG+TGG | + | chr3.4:4867393-4867412 | None:intergenic | 45.0% | |
| ACATCCTGGAAGTCTATTGG+AGG | - | chr3.4:4868603-4868622 | MS.gene51650:intron | 45.0% | |
| AGAAAGCAAAGGAGTCACAG+TGG | + | chr3.4:4870133-4870152 | None:intergenic | 45.0% | |
| AGAAGAGGACAAGACATCCA+GGG | - | chr3.4:4866719-4866738 | MS.gene51650:CDS | 45.0% | |
| AGGACAAAACCTGTCGGATT+TGG | - | chr3.4:4870481-4870500 | MS.gene51650:CDS | 45.0% | |
| AGTAGCAAAGGTTACCCCAT+CGG | + | chr3.4:4870454-4870473 | None:intergenic | 45.0% | |
| AGTAGTACCTGGCATGTCAT+AGG | - | chr3.4:4868191-4868210 | MS.gene51650:intron | 45.0% | |
| AGTTTGCCGATACCTTTCTC+TGG | + | chr3.4:4866771-4866790 | None:intergenic | 45.0% | |
| ATAACCAAGATCCGCCATTG+GGG | - | chr3.4:4867488-4867507 | MS.gene51650:intron | 45.0% | |
| ATCATCATGGAATCCCGATG+GGG | - | chr3.4:4870437-4870456 | MS.gene51650:CDS | 45.0% | |
| ATCCTGGAAGTCTATTGGAG+GGG | - | chr3.4:4868605-4868624 | MS.gene51650:intron | 45.0% | |
| ATTCATAGAGAACCGTGGAC+CGG | - | chr3.4:4866964-4866983 | MS.gene51650:CDS | 45.0% | |
| CAGCAAACAAAGTGAAGTGG+GGG | + | chr3.4:4869210-4869229 | None:intergenic | 45.0% | |
| CATAACCAAGATCCGCCATT+GGG | - | chr3.4:4867487-4867506 | MS.gene51650:intron | 45.0% | |
| CATACTTCTCTCAGTCCAGA+TGG | - | chr3.4:4870193-4870212 | MS.gene51650:intron | 45.0% | |
| CATCATCATGGAATCCCGAT+GGG | - | chr3.4:4870436-4870455 | MS.gene51650:CDS | 45.0% | |
| CATCCTGGAAGTCTATTGGA+GGG | - | chr3.4:4868604-4868623 | MS.gene51650:intron | 45.0% | |
| CCACAATTCATAGAGAACCG+TGG | - | chr3.4:4866959-4866978 | MS.gene51650:CDS | 45.0% | |
| CCACAGCAAACAAAGTGAAG+TGG | + | chr3.4:4869213-4869232 | None:intergenic | 45.0% | |
| CCACGGTTCTCTATGAATTG+TGG | + | chr3.4:4866962-4866981 | None:intergenic | 45.0% | |
| CTCCGCCACTAAATACTTTG+AGG | - | chr3.4:4867641-4867660 | MS.gene51650:intron | 45.0% | |
| GAAACCAGGACAAAACCTGT+CGG | - | chr3.4:4870475-4870494 | MS.gene51650:CDS | 45.0% | |
| GAAAGCAAAGGAGTCACAGT+GGG | + | chr3.4:4870132-4870151 | None:intergenic | 45.0% | |
| GAAAGTTGTAGCAACGCTCT+AGG | + | chr3.4:4869410-4869429 | None:intergenic | 45.0% | |
| GAATTGCACCACTACAAACC+AGG | + | chr3.4:4869873-4869892 | None:intergenic | 45.0% | |
| GACTATGTATACCCCAATGG+CGG | + | chr3.4:4867502-4867521 | None:intergenic | 45.0% | |
| GAGTACTTCAGAACTTGTGC+AGG | + | chr3.4:4868368-4868387 | None:intergenic | 45.0% | |
| GATCCCAAACCCCAATGAAA+AGG | + | chr3.4:4870722-4870741 | None:intergenic | 45.0% | |
| GATTGCGGCTTCAAATCAAC+AGG | - | chr3.4:4868058-4868077 | MS.gene51650:intron | 45.0% | |
| GCAGACATGTGACTTACATG+TGG | - | chr3.4:4868892-4868911 | MS.gene51650:intron | 45.0% | |
| GCAGAGACTTAGGACTTTAC+AGG | + | chr3.4:4869028-4869047 | None:intergenic | 45.0% | |
| GCGGAATTTATCCAAGTCAG+TGG | - | chr3.4:4870509-4870528 | MS.gene51650:intron | 45.0% | |
| GGACAAAACCTGTCGGATTT+GGG | - | chr3.4:4870482-4870501 | MS.gene51650:CDS | 45.0% | |
| GGTATGAGTAATTATGGCGC+CGG | + | chr3.4:4870773-4870792 | None:intergenic | 45.0% | |
| GGTTCGCCCAATTTCATGAA+AGG | - | chr3.4:4867022-4867041 | MS.gene51650:intron | 45.0% | |
| GTAGCACGAGGTCTAAATGA+TGG | - | chr3.4:4868487-4868506 | MS.gene51650:CDS | 45.0% | |
| TAATCGCTATGACATAGGGG+TGG | - | chr3.4:4867449-4867468 | MS.gene51650:CDS | 45.0% | |
| TAGAACAAAGCTCCGGTGTA+CGG | + | chr3.4:4867216-4867235 | None:intergenic | 45.0% | |
| TATCATGTGGCATGGCAAGA+TGG | + | chr3.4:4869107-4869126 | None:intergenic | 45.0% | |
| TCATAACCAAGATCCGCCAT+TGG | - | chr3.4:4867486-4867505 | MS.gene51650:intron | 45.0% | |
| TCCAAGAGACTCACATTCAC+TGG | + | chr3.4:4869982-4870001 | None:intergenic | 45.0% | |
| TCGCAATCAAGGCTTGAACT+CGG | + | chr3.4:4867290-4867309 | None:intergenic | 45.0% | |
| TTCAAAGCCTATGACATGCC+AGG | + | chr3.4:4868201-4868220 | None:intergenic | 45.0% | |
| TTCAGTGTGTGGTATGGGTT+CGG | + | chr3.4:4867683-4867702 | None:intergenic | 45.0% | |
| ! | AAGTCAGTGGCAGTGTTGAA+GGG | - | chr3.4:4870522-4870541 | MS.gene51650:intron | 45.0% |
| ! | ACACCTTTCCTGGTTTGTAG+TGG | - | chr3.4:4869862-4869881 | MS.gene51650:intron | 45.0% |
| ! | ACCTTTCTCTGGTGATGCTA+AGG | + | chr3.4:4866760-4866779 | None:intergenic | 45.0% |
| ! | ATTTAGTGGCGGAGCTTTGT+AGG | + | chr3.4:4867635-4867654 | None:intergenic | 45.0% |
| ! | CCACTTCACTTTGTTTGCTG+TGG | - | chr3.4:4869210-4869229 | MS.gene51650:intron | 45.0% |
| ! | GATAATCTTCTGGTTGCTGG+AGG | - | chr3.4:4868664-4868683 | MS.gene51650:intron | 45.0% |
| ! | GCAGTGTTGAAGGGAAATCT+CGG | - | chr3.4:4870531-4870550 | MS.gene51650:intron | 45.0% |
| ! | GCATCACCAGAGAAAGGTAT+CGG | - | chr3.4:4866762-4866781 | MS.gene51650:CDS | 45.0% |
| ! | GTAGTACTCTACGCCCTTTT+CGG | - | chr3.4:4870280-4870299 | MS.gene51650:intron | 45.0% |
| !! | AAATCCGACAGGTTTTGTCC+TGG | + | chr3.4:4870482-4870501 | None:intergenic | 45.0% |
| !! | AACAGATGGTTTTGCCTCTC+TGG | + | chr3.4:4867058-4867077 | None:intergenic | 45.0% |
| !! | ACTTTGTTTGCTGTGGTGCT+TGG | - | chr3.4:4869217-4869236 | MS.gene51650:intron | 45.0% |
| !! | CAAAGCATTTCCGTTTTCCC+TGG | - | chr3.4:4869956-4869975 | MS.gene51650:intron | 45.0% |
| !! | GAGAAAGGTATCGGCAAACT+AGG | - | chr3.4:4866771-4866790 | MS.gene51650:CDS | 45.0% |
| !! | TTATTTATTATTTACATATT+TGG | - | chr3.4:4867595-4867614 | MS.gene51650:intron | 5.0% |
| !!! | TATTTTGATATTTTTAATAA+TGG | - | chr3.4:4869811-4869830 | MS.gene51650:intron | 5.0% |
| AACCCCTCCAATAGACTTCC+AGG | + | chr3.4:4868610-4868629 | None:intergenic | 50.0% | |
| AAGACATCCAGGGGATTCCT+TGG | - | chr3.4:4866729-4866748 | MS.gene51650:CDS | 50.0% | |
| AAGGAATCTGCGTACCAGAG+AGG | - | chr3.4:4867041-4867060 | MS.gene51650:intron | 50.0% | |
| ACAGCTGCTCAAGCAAGAAG+AGG | - | chr3.4:4866704-4866723 | MS.gene51650:CDS | 50.0% | |
| ACTTGCCATCGGAAGAATGC+CGG | + | chr3.4:4870572-4870591 | None:intergenic | 50.0% | |
| AGAATGCCGGATTGAACGGA+TGG | + | chr3.4:4870559-4870578 | None:intergenic | 50.0% | |
| AGACATCCAGGGGATTCCTT+GGG | - | chr3.4:4866730-4866749 | MS.gene51650:CDS | 50.0% | |
| AGACTCACATTCACTGGCCA+GGG | + | chr3.4:4869976-4869995 | None:intergenic | 50.0% | |
| ATCTCCTGGCGTAGTGGTTA+AGG | + | chr3.4:4867387-4867406 | None:intergenic | 50.0% | |
| CAAACAAAGTGAAGTGGGGG+TGG | + | chr3.4:4869207-4869226 | None:intergenic | 50.0% | |
| CAATCCTTAACCACTACGCC+AGG | - | chr3.4:4867380-4867399 | MS.gene51650:intron | 50.0% | |
| CACAGTTCTCAGTGACACAC+TGG | - | chr3.4:4868332-4868351 | MS.gene51650:intron | 50.0% | |
| CATTCACTGGCCAGGGAAAA+CGG | + | chr3.4:4869969-4869988 | None:intergenic | 50.0% | |
| CGGAAGAATGCCGGATTGAA+CGG | + | chr3.4:4870563-4870582 | None:intergenic | 50.0% | |
| CTATGACATAGGGGTGGTCA+TGG | - | chr3.4:4867455-4867474 | MS.gene51650:CDS | 50.0% | |
| CTGGCGTAGTGGTTAAGGAT+TGG | + | chr3.4:4867382-4867401 | None:intergenic | 50.0% | |
| CTGGTTGCTGGAGGATTTCA+GGG | - | chr3.4:4868673-4868692 | MS.gene51650:intron | 50.0% | |
| CTTGAGCAAAAGCTGACACC+AGG | + | chr3.4:4869709-4869728 | None:intergenic | 50.0% | |
| GAAGAGGACAAGACATCCAG+GGG | - | chr3.4:4866720-4866739 | MS.gene51650:CDS | 50.0% | |
| GATGGGGTAACCTTTGCTAC+TGG | - | chr3.4:4870453-4870472 | MS.gene51650:CDS | 50.0% | |
| GCACCACTACAAACCAGGAA+AGG | + | chr3.4:4869868-4869887 | None:intergenic | 50.0% | |
| GCATCATCATGGAATCCCGA+TGG | - | chr3.4:4870435-4870454 | MS.gene51650:CDS | 50.0% | |
| GCCAGTGAATGTGAGTCTCT+TGG | - | chr3.4:4869978-4869997 | MS.gene51650:intron | 50.0% | |
| GCCTTAGCATCACCAGAGAA+AGG | - | chr3.4:4866756-4866775 | MS.gene51650:CDS | 50.0% | |
| GCGAGGTGCAATACACTTGT+GGG | + | chr3.4:4867194-4867213 | None:intergenic | 50.0% | |
| GCGGATCTTGGTTATGACAG+GGG | + | chr3.4:4867483-4867502 | None:intergenic | 50.0% | |
| GCTATACATGTGTCCCCCAT+AGG | - | chr3.4:4869604-4869623 | MS.gene51650:intron | 50.0% | |
| GCTGTAGCCTGTATCTACTC+TGG | - | chr3.4:4867869-4867888 | MS.gene51650:intron | 50.0% | |
| GGCGGATCTTGGTTATGACA+GGG | + | chr3.4:4867484-4867503 | None:intergenic | 50.0% | |
| GGGAGCAAATGCAGAGACTT+AGG | + | chr3.4:4869038-4869057 | None:intergenic | 50.0% | |
| GTAGCAAAGGTTACCCCATC+GGG | + | chr3.4:4870453-4870472 | None:intergenic | 50.0% | |
| GTAGCCTTCTCGAATATGGC+CGG | - | chr3.4:4870751-4870770 | MS.gene51650:CDS | 50.0% | |
| GTCCTGGTTTCCAGTAGCAA+AGG | + | chr3.4:4870466-4870485 | None:intergenic | 50.0% | |
| GTGATGCTAAGGCTATCCCA+AGG | + | chr3.4:4866749-4866768 | None:intergenic | 50.0% | |
| TCAATCCGGCATTCTTCCGA+TGG | - | chr3.4:4870564-4870583 | MS.gene51650:intron | 50.0% | |
| TCAGTGTGTGGTATGGGTTC+GGG | + | chr3.4:4867682-4867701 | None:intergenic | 50.0% | |
| TCTGGTTGCTGGAGGATTTC+AGG | - | chr3.4:4868672-4868691 | MS.gene51650:intron | 50.0% | |
| TGGGGTGGGAATAGATAACG+AGG | + | chr3.4:4870113-4870132 | None:intergenic | 50.0% | |
| TGTAAAAGAGGCTGGCGGTA+GGG | + | chr3.4:4869058-4869077 | None:intergenic | 50.0% | |
| TTAGACCTCGTGCTACGTGA+TGG | + | chr3.4:4868483-4868502 | None:intergenic | 50.0% | |
| TTGTAAAAGAGGCTGGCGGT+AGG | + | chr3.4:4869059-4869078 | None:intergenic | 50.0% | |
| ! | CAAGTCAGTGGCAGTGTTGA+AGG | - | chr3.4:4870521-4870540 | MS.gene51650:intron | 50.0% |
| ! | CTTCAACACTGCCACTGACT+TGG | + | chr3.4:4870523-4870542 | None:intergenic | 50.0% |
| ! | GGGGTTTGGGATCGTACTTA+TGG | - | chr3.4:4870729-4870748 | MS.gene51650:CDS | 50.0% |
| ! | TGGATGATGATGTGGCGTTG+AGG | - | chr3.4:4869153-4869172 | MS.gene51650:intron | 50.0% |
| ! | TGGCGGATCTTGGTTATGAC+AGG | + | chr3.4:4867485-4867504 | None:intergenic | 50.0% |
| !! | CTGGTGTCAGCTTTTGCTCA+AGG | - | chr3.4:4869707-4869726 | MS.gene51650:intron | 50.0% |
| !! | TATACCCCAATGGCGGATCT+TGG | + | chr3.4:4867495-4867514 | None:intergenic | 50.0% |
| AAGTGAAGTGGGGGTGGCAA+TGG | + | chr3.4:4869201-4869220 | None:intergenic | 55.0% | |
| AGCTGACACCAGGTCGATCT+AGG | + | chr3.4:4869699-4869718 | None:intergenic | 55.0% | |
| ATATCCCCCATTCAGGGGAC+AGG | - | chr3.4:4866819-4866838 | MS.gene51650:intron | 55.0% | |
| ATGCAGCACCTAGATCGACC+TGG | - | chr3.4:4869688-4869707 | MS.gene51650:intron | 55.0% | |
| CAAAGGAGTCACAGTGGGGT+GGG | + | chr3.4:4870127-4870146 | None:intergenic | 55.0% | |
| GAGACTCACATTCACTGGCC+AGG | + | chr3.4:4869977-4869996 | None:intergenic | 55.0% | |
| GGCGAGGTGCAATACACTTG+TGG | + | chr3.4:4867195-4867214 | None:intergenic | 55.0% | |
| GTGGTATGGGTTCGGGTATG+TGG | + | chr3.4:4867675-4867694 | None:intergenic | 55.0% | |
| TATTGCACCTCGCCGTACAC+CGG | - | chr3.4:4867201-4867220 | MS.gene51650:CDS | 55.0% | |
| TCGGAGCCATCCGTTCAATC+CGG | - | chr3.4:4870550-4870569 | MS.gene51650:intron | 55.0% | |
| TGGACACGTTGCACCATCAG+AGG | - | chr3.4:4868396-4868415 | MS.gene51650:intron | 55.0% | |
| ! | CCTGTCGGATTTGGGACATG+CGG | - | chr3.4:4870490-4870509 | MS.gene51650:intron | 55.0% |
| ! | CTCGCGGCACTTTTGCAGAT+TGG | - | chr3.4:4867001-4867020 | MS.gene51650:intron | 55.0% |
| AGCACTCGCTAACCGGTCCA+CGG | + | chr3.4:4866979-4866998 | None:intergenic | 60.0% | |
| CACCACCATCACGTAGCACG+AGG | - | chr3.4:4868475-4868494 | MS.gene51650:intron | 60.0% | |
| CCCATTCAGGGGACAGGTCA+GGG | - | chr3.4:4866825-4866844 | MS.gene51650:intron | 60.0% | |
| CCCTGACCTGTCCCCTGAAT+GGG | + | chr3.4:4866828-4866847 | None:intergenic | 60.0% | |
| CCGCATGTCCCAAATCCGAC+AGG | + | chr3.4:4870493-4870512 | None:intergenic | 60.0% | |
| CCTGACCTGTCCCCTGAATG+GGG | + | chr3.4:4866827-4866846 | None:intergenic | 60.0% | |
| CTGACCTGTCCCCTGAATGG+GGG | + | chr3.4:4866826-4866845 | None:intergenic | 60.0% | |
| GACCTCGTGCTACGTGATGG+TGG | + | chr3.4:4868480-4868499 | None:intergenic | 60.0% | |
| GCAAAGGAGTCACAGTGGGG+TGG | + | chr3.4:4870128-4870147 | None:intergenic | 60.0% | |
| GGCTATCCCAAGGAATCCCC+TGG | + | chr3.4:4866739-4866758 | None:intergenic | 60.0% | |
| TCCCTGACCTGTCCCCTGAA+TGG | + | chr3.4:4866829-4866848 | None:intergenic | 60.0% | |
| TGAAGTGGGGGTGGCAATGG+AGG | + | chr3.4:4869198-4869217 | None:intergenic | 60.0% | |
| TGGGGGTGGCAATGGAGGAT+GGG | + | chr3.4:4869193-4869212 | None:intergenic | 60.0% | |
| TTCAGGGGACAGGTCAGGGA+AGG | - | chr3.4:4866829-4866848 | MS.gene51650:intron | 60.0% | |
| !! | CTCGTGCTACGTGATGGTGG+TGG | + | chr3.4:4868477-4868496 | None:intergenic | 60.0% |
| CAAAGCTCCGGTGTACGGCG+AGG | + | chr3.4:4867211-4867230 | None:intergenic | 65.0% | |
| CCCCATTCAGGGGACAGGTC+AGG | - | chr3.4:4866824-4866843 | MS.gene51650:intron | 65.0% | |
| GCGAGCCAGCACTCGCTAAC+CGG | + | chr3.4:4866986-4867005 | None:intergenic | 65.0% | |
| GTGGACCGGTTAGCGAGTGC+TGG | - | chr3.4:4866978-4866997 | MS.gene51650:intron | 65.0% | |
| GTGGGGGTGGCAATGGAGGA+TGG | + | chr3.4:4869194-4869213 | None:intergenic | 65.0% | |
| !! | GGCGCCGGCCATATTCGAGA+AGG | + | chr3.4:4870758-4870777 | None:intergenic | 65.0% |
| !! | GGTTAGCGAGTGCTGGCTCG+CGG | - | chr3.4:4866985-4867004 | MS.gene51650:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 4866378 | 4870809 | 4866378 | ID=MS.gene51650 |
| chr3.4 | mRNA | 4866378 | 4870809 | 4866378 | ID=MS.gene51650.t1;Parent=MS.gene51650 |
| chr3.4 | exon | 4870663 | 4870809 | 4870663 | ID=MS.gene51650.t1.exon1;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4870663 | 4870809 | 4870663 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4870337 | 4870504 | 4870337 | ID=MS.gene51650.t1.exon2;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4870337 | 4870504 | 4870337 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4869323 | 4869409 | 4869323 | ID=MS.gene51650.t1.exon3;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4869323 | 4869409 | 4869323 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4868770 | 4868904 | 4868770 | ID=MS.gene51650.t1.exon4;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4868770 | 4868904 | 4868770 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4868476 | 4868586 | 4868476 | ID=MS.gene51650.t1.exon5;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4868476 | 4868586 | 4868476 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4867402 | 4867493 | 4867402 | ID=MS.gene51650.t1.exon6;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4867402 | 4867493 | 4867402 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4867200 | 4867305 | 4867200 | ID=MS.gene51650.t1.exon7;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4867200 | 4867305 | 4867200 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4866908 | 4866994 | 4866908 | ID=MS.gene51650.t1.exon8;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4866908 | 4866994 | 4866908 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| chr3.4 | exon | 4866378 | 4866791 | 4866378 | ID=MS.gene51650.t1.exon9;Parent=MS.gene51650.t1 |
| chr3.4 | CDS | 4866378 | 4866791 | 4866378 | ID=cds.MS.gene51650.t1;Parent=MS.gene51650.t1 |
| Gene Sequence |
| Protein sequence |
