Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055620.t1 | XP_013467772.1 | 99.1 | 440 | 4 | 0 | 1 | 440 | 1 | 440 | 3.20E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055620.t1 | Q9M9Y8 | 87.7 | 440 | 54 | 0 | 1 | 440 | 156 | 595 | 8.9e-232 | 803.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055620.t1 | A0A072VIF6 | 99.1 | 440 | 4 | 0 | 1 | 440 | 1 | 440 | 2.3e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene055620 | 0.807406 | 5.13E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene055620 | 0.810799 | 9.63E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene056947 | 0.822265 | 2.60E-53 | -1.69E-46 |
| MS.gene055620 | MS.gene058948 | 0.807171 | 5.76E-50 | -1.69E-46 |
| MS.gene055620 | MS.gene05934 | 0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene055620 | MS.gene060804 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene060837 | 0.802643 | 5.09E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene069302 | 0.821537 | 3.83E-53 | -1.69E-46 |
| MS.gene055620 | MS.gene071258 | 0.816035 | 6.81E-52 | -1.69E-46 |
| MS.gene055620 | MS.gene072766 | 0.814491 | 1.50E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene073077 | 0.834409 | 3.05E-56 | -1.69E-46 |
| MS.gene055620 | MS.gene074333 | 0.80491 | 1.72E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene09877 | 0.829389 | 5.29E-55 | -1.69E-46 |
| MS.gene055620 | MS.gene09953 | 0.804372 | 2.23E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene31940 | 0.811294 | 7.52E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene34450 | 0.802504 | 5.44E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene35021 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene055620 | MS.gene38765 | 0.812331 | 4.47E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene39421 | 0.804657 | 1.94E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene39990 | 0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene40023 | 0.814789 | 1.29E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene52101 | 0.801087 | 1.06E-48 | -1.69E-46 |
| MS.gene055620 | MS.gene61160 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene055620 | MS.gene68677 | 0.814462 | 1.52E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene68845 | 0.829007 | 6.55E-55 | -1.69E-46 |
| MS.gene055620 | MS.gene68856 | 0.819083 | 1.40E-52 | -1.69E-46 |
| MS.gene055620 | MS.gene68965 | 0.809281 | 2.04E-50 | -1.69E-46 |
| MS.gene055620 | MS.gene69103 | 0.803503 | 3.38E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene69650 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene055620 | MS.gene69694 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene69695 | 0.817043 | 4.05E-52 | -1.69E-46 |
| MS.gene055620 | MS.gene69910 | 0.805527 | 1.28E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene70369 | 0.80925 | 2.08E-50 | -1.69E-46 |
| MS.gene055620 | MS.gene70538 | 0.802029 | 6.81E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene75297 | 0.803878 | 2.82E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene84399 | 0.807528 | 4.84E-50 | -1.69E-46 |
| MS.gene055620 | MS.gene84575 | 0.80318 | 3.94E-49 | -1.69E-46 |
| MS.gene055620 | MS.gene91827 | 0.835113 | 2.03E-56 | -1.69E-46 |
| MS.gene055620 | MS.gene92239 | 0.813483 | 2.50E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene97422 | 0.806445 | 8.20E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055620.t1 | MTR_1g054965 | 99.091 | 440 | 4 | 0 | 1 | 440 | 157 | 596 | 0.0 | 908 |
| MS.gene055620.t1 | MTR_1g054965 | 99.091 | 440 | 4 | 0 | 1 | 440 | 1 | 440 | 0.0 | 907 |
| MS.gene055620.t1 | MTR_1g054965 | 98.837 | 344 | 4 | 0 | 1 | 344 | 157 | 500 | 0.0 | 707 |
| MS.gene055620.t1 | MTR_1g054965 | 98.288 | 292 | 5 | 0 | 53 | 344 | 11 | 302 | 0.0 | 592 |
| MS.gene055620.t1 | MTR_4g134780 | 32.609 | 368 | 228 | 10 | 72 | 428 | 219 | 577 | 6.76e-51 | 181 |
| MS.gene055620.t1 | MTR_8g077580 | 25.220 | 341 | 202 | 11 | 117 | 416 | 233 | 561 | 2.42e-12 | 69.3 |
| MS.gene055620.t1 | MTR_1g034450 | 25.000 | 292 | 169 | 10 | 148 | 401 | 118 | 397 | 8.53e-12 | 67.0 |
| MS.gene055620.t1 | MTR_1g034450 | 25.000 | 292 | 169 | 10 | 148 | 401 | 270 | 549 | 2.01e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055620.t1 | AT1G06820 | 87.736 | 424 | 52 | 0 | 1 | 424 | 156 | 579 | 0.0 | 788 |
| MS.gene055620.t1 | AT1G06820 | 87.736 | 424 | 52 | 0 | 1 | 424 | 37 | 460 | 0.0 | 787 |
| MS.gene055620.t1 | AT1G06820 | 86.247 | 429 | 57 | 1 | 1 | 429 | 156 | 582 | 0.0 | 779 |
| MS.gene055620.t1 | AT1G06820 | 86.919 | 344 | 45 | 0 | 1 | 344 | 156 | 499 | 0.0 | 630 |
| MS.gene055620.t1 | AT1G57770 | 33.824 | 340 | 204 | 12 | 102 | 430 | 245 | 574 | 6.53e-48 | 173 |
| MS.gene055620.t1 | AT5G49555 | 24.047 | 341 | 206 | 12 | 117 | 416 | 225 | 553 | 1.10e-13 | 73.6 |
Find 104 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGTAGCATTTGATATTA+TGG | 0.166724 | 1.4:+55178783 | None:intergenic |
| ATTTCAGCTCCAACGAATTC+AGG | 0.213778 | 1.4:+55180714 | None:intergenic |
| TGGAAGTTCTCTTCCTCTTT+TGG | 0.245609 | 1.4:+55178602 | None:intergenic |
| AGCATTTGATATTATGGTTT+TGG | 0.254832 | 1.4:+55178789 | None:intergenic |
| CTGCTTCTTTGCCTCATATT+CGG | 0.301743 | 1.4:+55178063 | None:intergenic |
| GTGGGATTAACTACCCTCTT+GGG | 0.310382 | 1.4:-55179044 | MS.gene055620:CDS |
| GGCATGCTGCTTGGGTTGCT+TGG | 0.312524 | 1.4:-55177029 | MS.gene055620:CDS |
| TATATTCACAACTTCTTCAA+TGG | 0.321714 | 1.4:-55178287 | MS.gene055620:CDS |
| CCTCTTGAATGCTTGACATT+AGG | 0.345892 | 1.4:-55180647 | MS.gene055620:intron |
| CTTGTAGGAAAGCTTGTAAA+AGG | 0.347722 | 1.4:-55178635 | MS.gene055620:intron |
| GCCCGTGACGAGGGTACTTA+TGG | 0.350068 | 1.4:-55177704 | MS.gene055620:CDS |
| CTGAGAGGTGGTTTGGTAGA+TGG | 0.352687 | 1.4:+55180950 | None:intergenic |
| GTGGATCCTGAATATACTTC+CGG | 0.362723 | 1.4:+55179854 | None:intergenic |
| CTAGAACAATTGGACCAGTT+TGG | 0.364549 | 1.4:-55178392 | MS.gene055620:intron |
| TGCTGCTTGGGTTGCTTGGT+TGG | 0.365552 | 1.4:-55177025 | MS.gene055620:CDS |
| CATCGAGTAGCTGCAGATAT+TGG | 0.371399 | 1.4:-55177430 | MS.gene055620:intron |
| TGTAACTTATCTAGAACAAT+TGG | 0.374477 | 1.4:-55178402 | MS.gene055620:intron |
| GGCAAAAGGTCTAGTTGATC+AGG | 0.375101 | 1.4:-55178995 | MS.gene055620:CDS |
| AAACTTACTGTTGTGTTAAA+CGG | 0.378010 | 1.4:+55177641 | None:intergenic |
| GTTATTGCTGTAGCTTTCTC+AGG | 0.379480 | 1.4:-55177466 | MS.gene055620:CDS |
| AAGTATCGTCGATGTGTCTT+AGG | 0.386513 | 1.4:+55177728 | None:intergenic |
| AGCATTCCAAAGGGGTTGTT+AGG | 0.391726 | 1.4:-55177668 | MS.gene055620:CDS |
| TTAGAGAAGAAATTGTTTCC+AGG | 0.395116 | 1.4:-55178013 | MS.gene055620:CDS |
| TGAAGGATATGACGACCTTC+AGG | 0.399654 | 1.4:+55178310 | None:intergenic |
| ATTTCTTCTCTAATCTGCTT+AGG | 0.405930 | 1.4:+55178023 | None:intergenic |
| GTTGGAGACAGTTGCTTCCC+TGG | 0.408956 | 1.4:-55177496 | MS.gene055620:CDS |
| AGCATTCACCGTAGAATTTG+AGG | 0.410752 | 1.4:+55180854 | None:intergenic |
| GGCATTCCTAACAACCCCTT+TGG | 0.415481 | 1.4:+55177662 | None:intergenic |
| TCCATATGGTTCCTCCAAAC+TGG | 0.419387 | 1.4:+55178378 | None:intergenic |
| TATTATTTGCCTCAAAATGC+TGG | 0.423282 | 1.4:-55179886 | MS.gene055620:CDS |
| TTTGGAATGCTGCGTGGCAT+TGG | 0.424414 | 1.4:+55177680 | None:intergenic |
| AAATGATGACAATCTGTATC+TGG | 0.425094 | 1.4:+55178512 | None:intergenic |
| GCTACCAGATGGGACACATT+TGG | 0.431536 | 1.4:-55178769 | MS.gene055620:intron |
| TGGATCCTGAATATACTTCC+GGG | 0.441071 | 1.4:+55179855 | None:intergenic |
| CATAGCCCGGAAGTATATTC+AGG | 0.441329 | 1.4:-55179860 | MS.gene055620:CDS |
| AAATGAACGGTTGTCGGATC+AGG | 0.442725 | 1.4:+55180973 | None:intergenic |
| ACTTGCTTTCAGAGCATAGA+TGG | 0.443465 | 1.4:-55177529 | MS.gene055620:intron |
| CTAACCAAATGTGTCCCATC+TGG | 0.445008 | 1.4:+55178765 | None:intergenic |
| GGTGGGATTAACTACCCTCT+TGG | 0.447475 | 1.4:-55179045 | MS.gene055620:CDS |
| AGCAGCATGCCATCCAAAAC+AGG | 0.450495 | 1.4:+55177041 | None:intergenic |
| TTCTTCAATGGACGATTGGC+AGG | 0.456294 | 1.4:-55178275 | MS.gene055620:intron |
| ACCAGTTTGGAGGAACCATA+TGG | 0.456800 | 1.4:-55178379 | MS.gene055620:CDS |
| GAGTTACTTTCCCCACGAAA+AGG | 0.467163 | 1.4:-55180884 | MS.gene055620:CDS |
| TGGAGTCTGCAAAGCGTTGA+CGG | 0.473220 | 1.4:+55179618 | None:intergenic |
| ACCATGCTAGCATTAATCAT+TGG | 0.478809 | 1.4:+55179598 | None:intergenic |
| CTGAATATACTTCCGGGCTA+TGG | 0.480567 | 1.4:+55179861 | None:intergenic |
| TGGGATTAACTACCCTCTTG+GGG | 0.481634 | 1.4:-55179043 | MS.gene055620:CDS |
| CACGAGTATTATCACCGAGC+AGG | 0.494330 | 1.4:-55178944 | MS.gene055620:CDS |
| CAACTTCTTCAATGGACGAT+TGG | 0.495431 | 1.4:-55178279 | MS.gene055620:CDS |
| AAAATGCTGGAGCCATAGCC+CGG | 0.498070 | 1.4:-55179873 | MS.gene055620:CDS |
| TCAAATTCTACGGTGAATGC+TGG | 0.498661 | 1.4:-55180852 | MS.gene055620:CDS |
| ATGTGTATTGAAAGAAAAGA+TGG | 0.502132 | 1.4:+55178560 | None:intergenic |
| TCGATGGATGCTCGAAGACC+TGG | 0.502515 | 1.4:+55177995 | None:intergenic |
| TTTCAATGCCCTGAATTCGT+TGG | 0.504784 | 1.4:-55180723 | MS.gene055620:CDS |
| ATTGCAAAGTCCTTGGCAAA+AGG | 0.507882 | 1.4:-55179009 | MS.gene055620:CDS |
| AGGAGAATCACTACCAAAAG+AGG | 0.509808 | 1.4:-55178615 | MS.gene055620:CDS |
| CGAATATGAGGCAAAGAAGC+AGG | 0.510443 | 1.4:-55178062 | MS.gene055620:CDS |
| TTTCAGCTCCAACGAATTCA+GGG | 0.512472 | 1.4:+55180715 | None:intergenic |
| ACTCGAACTGAGAGGTGGTT+TGG | 0.517725 | 1.4:+55180943 | None:intergenic |
| CTTTACCTCTATAAAATCGA+TGG | 0.518459 | 1.4:+55177979 | None:intergenic |
| AGATGGAAATGAACGGTTGT+CGG | 0.520217 | 1.4:+55180967 | None:intergenic |
| ACTTACGGCTTTGCCCTGCT+CGG | 0.522769 | 1.4:+55178930 | None:intergenic |
| GAACAATTGGACCAGTTTGG+AGG | 0.525975 | 1.4:-55178389 | MS.gene055620:CDS |
| GCTTGGTTGGTTAAGAACAC+TGG | 0.526189 | 1.4:-55177012 | MS.gene055620:CDS |
| TCTCTCAAGAACCGAATATG+AGG | 0.528750 | 1.4:-55178074 | MS.gene055620:CDS |
| ATGCCACGCAGCATTCCAAA+GGG | 0.532817 | 1.4:-55177677 | MS.gene055620:CDS |
| ATAGATGGTCTTTACTGTGT+TGG | 0.534434 | 1.4:-55177514 | MS.gene055620:CDS |
| GACAGTTGCTTCCCTGGACA+AGG | 0.535454 | 1.4:-55177490 | MS.gene055620:CDS |
| TGTGTGACAGACACTTTGGT+GGG | 0.539652 | 1.4:-55179062 | MS.gene055620:CDS |
| AAGAAGTTGTGAATATATGA+AGG | 0.541078 | 1.4:+55178293 | None:intergenic |
| ACAGCAATAACACCTTGTCC+AGG | 0.542134 | 1.4:+55177478 | None:intergenic |
| GTCCATAAGTACCCTCGTCA+CGG | 0.543450 | 1.4:+55177702 | None:intergenic |
| TCCAATGATTAATGCTAGCA+TGG | 0.556512 | 1.4:-55179599 | MS.gene055620:intron |
| TAATATCAAATGCTACCAGA+TGG | 0.556998 | 1.4:-55178780 | MS.gene055620:CDS |
| GACGGCATCCTCAAATTCTA+CGG | 0.562130 | 1.4:-55180862 | MS.gene055620:CDS |
| TGGTGGGATTGCAAAGTCCT+TGG | 0.575419 | 1.4:-55179016 | MS.gene055620:CDS |
| TCCATAAGTACCCTCGTCAC+GGG | 0.581708 | 1.4:+55177703 | None:intergenic |
| GTTCTGTGTGACAGACACTT+TGG | 0.585250 | 1.4:-55179066 | MS.gene055620:CDS |
| AATGATGAATCAAGTATAGT+CGG | 0.590388 | 1.4:+55178337 | None:intergenic |
| AATATCAAATGCTACCAGAT+GGG | 0.590576 | 1.4:-55178779 | MS.gene055620:CDS |
| GTTGTCTTTCATAGATGCTG+AGG | 0.591209 | 1.4:-55179827 | MS.gene055620:intron |
| AATGCCACGCAGCATTCCAA+AGG | 0.592149 | 1.4:-55177678 | MS.gene055620:CDS |
| GATTCATCATTAGCTCCTGA+AGG | 0.593456 | 1.4:-55178325 | MS.gene055620:CDS |
| CTGTGTGACAGACACTTTGG+TGG | 0.593994 | 1.4:-55179063 | MS.gene055620:CDS |
| TACTTTCCCCACGAAAAGGA+CGG | 0.594585 | 1.4:-55180880 | MS.gene055620:CDS |
| ACGAGTATTATCACCGAGCA+GGG | 0.595181 | 1.4:-55178943 | MS.gene055620:CDS |
| CCTAATGTCAAGCATTCAAG+AGG | 0.600419 | 1.4:+55180647 | None:intergenic |
| ATTCTACGGTGAATGCTGGA+AGG | 0.608327 | 1.4:-55180848 | MS.gene055620:intron |
| GTTGGAGCTGAAATCGCTTG+AGG | 0.608624 | 1.4:-55180705 | MS.gene055620:CDS |
| GGGATTAACTACCCTCTTGG+GGG | 0.619406 | 1.4:-55179042 | MS.gene055620:CDS |
| GGGTAGTCAGATACTTTACA+AGG | 0.622656 | 1.4:-55178974 | MS.gene055620:CDS |
| GCAAAAGGTCTAGTTGATCA+GGG | 0.623548 | 1.4:-55178994 | MS.gene055620:CDS |
| CAGCAATAACACCTTGTCCA+GGG | 0.633374 | 1.4:+55177479 | None:intergenic |
| GTAGGAGTGAGGCTTTCAGA+CGG | 0.637138 | 1.4:-55178826 | MS.gene055620:CDS |
| TGTGCACTCGAACTGAGAGG+TGG | 0.648501 | 1.4:+55180938 | None:intergenic |
| ACGATACTTAGCCCGTGACG+AGG | 0.654000 | 1.4:-55177714 | MS.gene055620:CDS |
| CTCTGTGCACTCGAACTGAG+AGG | 0.658093 | 1.4:+55180935 | None:intergenic |
| CGATACTTAGCCCGTGACGA+GGG | 0.667190 | 1.4:-55177713 | MS.gene055620:CDS |
| AACCCCTTTGGAATGCTGCG+TGG | 0.680893 | 1.4:+55177674 | None:intergenic |
| TCTATGAAAGACAACAACTG+TGG | 0.692035 | 1.4:+55179835 | None:intergenic |
| GTTTGGTAGATGGAAATGAA+CGG | 0.693676 | 1.4:+55180960 | None:intergenic |
| TGATGACAATCTGTATCTGG+TGG | 0.706460 | 1.4:+55178515 | None:intergenic |
| ATATGAGGCAAAGAAGCAGG+TGG | 0.709650 | 1.4:-55178059 | MS.gene055620:CDS |
| TGCCACGCAGCATTCCAAAG+GGG | 0.750458 | 1.4:-55177676 | MS.gene055620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATTATTAAAAAAT+AGG | - | chr1.4:55180912-55180931 | MS.gene055620:CDS | 0.0% |
| !!! | TTTTTTATTATTAAAAAATA+GGG | - | chr1.4:55180913-55180932 | MS.gene055620:CDS | 0.0% |
| !! | AAAAAAATGAATTAAAAAAG+CGG | + | chr1.4:55177219-55177238 | None:intergenic | 10.0% |
| !! | TGAAAATATAATGTTAAAAT+AGG | + | chr1.4:55178039-55178058 | None:intergenic | 10.0% |
| !!! | TTTAACATTATATTTTCATA+TGG | - | chr1.4:55178041-55178060 | MS.gene055620:CDS | 10.0% |
| !! | AAATATAATGTTAAAATAGG+AGG | + | chr1.4:55178036-55178055 | None:intergenic | 15.0% |
| !! | AATATAATGTTAAAATAGGA+GGG | + | chr1.4:55178035-55178054 | None:intergenic | 15.0% |
| !! | TAATATAATAAACAAAAGCA+CGG | + | chr1.4:55180800-55180819 | None:intergenic | 15.0% |
| !! | TATATTATGAAAAGATAATG+TGG | + | chr1.4:55178259-55178278 | None:intergenic | 15.0% |
| !! | TTATTATTAAAAAATAGGGT+TGG | - | chr1.4:55180917-55180936 | MS.gene055620:CDS | 15.0% |
| !!! | AAAAATATTTTAACAACGTA+CGG | + | chr1.4:55180082-55180101 | None:intergenic | 15.0% |
| !!! | AGATTTCAACTTTATTTTAT+TGG | + | chr1.4:55179766-55179785 | None:intergenic | 15.0% |
| !!! | ATTTGTTTATTTTGAATATG+AGG | - | chr1.4:55177382-55177401 | MS.gene055620:intron | 15.0% |
| !! | AAAAAAGATGCAACATAATT+AGG | - | chr1.4:55177858-55177877 | MS.gene055620:intron | 20.0% |
| !! | AATTAATCAAATAAAGAAGC+AGG | + | chr1.4:55178896-55178915 | None:intergenic | 20.0% |
| !! | ACACATAAATAATCAAGATT+TGG | + | chr1.4:55180192-55180211 | None:intergenic | 20.0% |
| !! | ATATAATGTTAAAATAGGAG+GGG | + | chr1.4:55178034-55178053 | None:intergenic | 20.0% |
| !! | ATTACAAATTATGTCTTCTA+GGG | + | chr1.4:55180128-55180147 | None:intergenic | 20.0% |
| !! | ATTATGAGATTTACATGTAT+TGG | + | chr1.4:55179867-55179886 | None:intergenic | 20.0% |
| !! | CAAAAGATCGTATATAATAA+TGG | + | chr1.4:55178685-55178704 | None:intergenic | 20.0% |
| !! | CTATATAGAATTATAAGTTG+AGG | + | chr1.4:55179530-55179549 | None:intergenic | 20.0% |
| !! | GATGTAATTGAAAATTTGAA+AGG | - | chr1.4:55177904-55177923 | MS.gene055620:intron | 20.0% |
| !! | GATTGAAATATACATATTGA+AGG | + | chr1.4:55177516-55177535 | None:intergenic | 20.0% |
| !! | TAAAATAATGATTCAATGAC+AGG | - | chr1.4:55180378-55180397 | MS.gene055620:intron | 20.0% |
| !! | TATTACAAATTATGTCTTCT+AGG | + | chr1.4:55180129-55180148 | None:intergenic | 20.0% |
| !! | TATTGGCAAATGAATAAAAT+AGG | + | chr1.4:55179850-55179869 | None:intergenic | 20.0% |
| !! | TCAGAAAATTATTCACAAAT+TGG | + | chr1.4:55177431-55177450 | None:intergenic | 20.0% |
| !! | TTAAAAGTTTACATTTGTGA+TGG | - | chr1.4:55177240-55177259 | MS.gene055620:intron | 20.0% |
| !!! | ATAAGGTTTACCTATTTTTA+TGG | - | chr1.4:55178216-55178235 | MS.gene055620:intron | 20.0% |
| !!! | ATTCTATTTTGTAATCTGAT+AGG | + | chr1.4:55179090-55179109 | None:intergenic | 20.0% |
| !!! | CATTATATTTTCATATGGTT+TGG | - | chr1.4:55178046-55178065 | MS.gene055620:CDS | 20.0% |
| !!! | CATTATTATATACGATCTTT+TGG | - | chr1.4:55178683-55178702 | MS.gene055620:intron | 20.0% |
| !!! | TCATTTAATATTTGCCTTTT+TGG | - | chr1.4:55180686-55180705 | MS.gene055620:CDS | 20.0% |
| ! | AAAATGAATTAAAAAAGCGG+AGG | + | chr1.4:55177216-55177235 | None:intergenic | 25.0% |
| ! | AAACTTACTGTTGTGTTAAA+CGG | + | chr1.4:55180354-55180373 | None:intergenic | 25.0% |
| ! | AAAGTACAGTAAAAAGAATG+AGG | + | chr1.4:55180052-55180071 | None:intergenic | 25.0% |
| ! | AAGAAGTTGTGAATATATGA+AGG | + | chr1.4:55179702-55179721 | None:intergenic | 25.0% |
| ! | AAGGTAACATTATGTAATTC+GGG | + | chr1.4:55179340-55179359 | None:intergenic | 25.0% |
| ! | AATCAATGTGATTCTATACT+TGG | + | chr1.4:55177714-55177733 | None:intergenic | 25.0% |
| ! | AATGATGAATCAAGTATAGT+CGG | + | chr1.4:55179658-55179677 | None:intergenic | 25.0% |
| ! | ACAAAATAGAATGACATGTT+TGG | - | chr1.4:55179098-55179117 | MS.gene055620:intron | 25.0% |
| ! | AGTTATTCAATTCAGTCATA+AGG | - | chr1.4:55178199-55178218 | MS.gene055620:intron | 25.0% |
| ! | ATGAAAAAAAGCAAAAAGCT+AGG | + | chr1.4:55178430-55178449 | None:intergenic | 25.0% |
| ! | ATGTGTATTGAAAGAAAAGA+TGG | + | chr1.4:55179435-55179454 | None:intergenic | 25.0% |
| ! | ATTACATAATGTTACCTTGT+AGG | - | chr1.4:55179342-55179361 | MS.gene055620:intron | 25.0% |
| ! | CAAGGTAACATTATGTAATT+CGG | + | chr1.4:55179341-55179360 | None:intergenic | 25.0% |
| ! | TATATTCACAACTTCTTCAA+TGG | - | chr1.4:55179705-55179724 | MS.gene055620:intron | 25.0% |
| ! | TCAACACTTTCCATAAAAAT+AGG | + | chr1.4:55178229-55178248 | None:intergenic | 25.0% |
| ! | TTATTCACAAATTGGAGTTT+AGG | + | chr1.4:55177423-55177442 | None:intergenic | 25.0% |
| ! | TTTGTGTCTCAGAATTTATA+TGG | - | chr1.4:55177612-55177631 | MS.gene055620:intron | 25.0% |
| !! | AGATCGTATATAATAATGGA+AGG | + | chr1.4:55178681-55178700 | None:intergenic | 25.0% |
| !! | AGCATTTGATATTATGGTTT+TGG | + | chr1.4:55179206-55179225 | None:intergenic | 25.0% |
| !! | ATCTTTTCTTTCAATACACA+TGG | - | chr1.4:55179434-55179453 | MS.gene055620:intron | 25.0% |
| !! | ATTTGATTAATTTTGTCTCC+AGG | - | chr1.4:55178904-55178923 | MS.gene055620:intron | 25.0% |
| !! | TCTTTTCTTTCAATACACAT+GGG | - | chr1.4:55179435-55179454 | MS.gene055620:intron | 25.0% |
| !! | TGTAACTTATCTAGAACAAT+TGG | - | chr1.4:55179590-55179609 | MS.gene055620:intron | 25.0% |
| !!! | ATGTTCTTGTTTTCTGTTTT+AGG | - | chr1.4:55179894-55179913 | MS.gene055620:intron | 25.0% |
| !!! | GAAAGTTGCTAGTTTTAAAT+TGG | - | chr1.4:55177750-55177769 | MS.gene055620:intron | 25.0% |
| !!! | GAGCTTTAACATAAACTTTT+TGG | + | chr1.4:55179413-55179432 | None:intergenic | 25.0% |
| !!! | TGTTCTTGTTTTCTGTTTTA+GGG | - | chr1.4:55179895-55179914 | MS.gene055620:intron | 25.0% |
| AAATGATGACAATCTGTATC+TGG | + | chr1.4:55179483-55179502 | None:intergenic | 30.0% | |
| AATATCAAATGCTACCAGAT+GGG | - | chr1.4:55179213-55179232 | MS.gene055620:intron | 30.0% | |
| ATGAATGAAAATTACCAAGC+AGG | + | chr1.4:55178317-55178336 | None:intergenic | 30.0% | |
| ATTTCTTCTCTAATCTGCTT+AGG | + | chr1.4:55179972-55179991 | None:intergenic | 30.0% | |
| CGCTATAAATATGTCCAAAA+AGG | + | chr1.4:55180703-55180722 | None:intergenic | 30.0% | |
| CGGGATTAACAAATTAATGA+AGG | + | chr1.4:55179321-55179340 | None:intergenic | 30.0% | |
| CTCAAAAAGATACTTCCATA+TGG | + | chr1.4:55179631-55179650 | None:intergenic | 30.0% | |
| CTTTACCTCTATAAAATCGA+TGG | + | chr1.4:55180016-55180035 | None:intergenic | 30.0% | |
| GACAAAAAAGATTACAGTGT+TGG | + | chr1.4:55178590-55178609 | None:intergenic | 30.0% | |
| TAATATCAAATGCTACCAGA+TGG | - | chr1.4:55179212-55179231 | MS.gene055620:intron | 30.0% | |
| TATTATTTGCCTCAAAATGC+TGG | - | chr1.4:55178106-55178125 | MS.gene055620:intron | 30.0% | |
| TCATTCGTTCAAAGTTATCA+AGG | + | chr1.4:55179553-55179572 | None:intergenic | 30.0% | |
| TCTGGTAGCATTTGATATTA+TGG | + | chr1.4:55179212-55179231 | None:intergenic | 30.0% | |
| TGAATGAAAATTACCAAGCA+GGG | + | chr1.4:55178316-55178335 | None:intergenic | 30.0% | |
| TGATTCTATACTTGGAGTTA+GGG | + | chr1.4:55177706-55177725 | None:intergenic | 30.0% | |
| TGGCAAATGAATAAAATAGG+AGG | + | chr1.4:55179847-55179866 | None:intergenic | 30.0% | |
| TTACTGAACATCATTACTCT+TGG | - | chr1.4:55177583-55177602 | MS.gene055620:intron | 30.0% | |
| TTAGAGAAGAAATTGTTTCC+AGG | - | chr1.4:55179979-55179998 | MS.gene055620:intron | 30.0% | |
| TTTCATTCATAAAAGCTCTG+TGG | - | chr1.4:55178327-55178346 | MS.gene055620:CDS | 30.0% | |
| ! | AATCACATTGATTGAATCAC+GGG | - | chr1.4:55177721-55177740 | MS.gene055620:CDS | 30.0% |
| ! | ATTTTGAATATGAGGCTACA+AGG | - | chr1.4:55177390-55177409 | MS.gene055620:intron | 30.0% |
| ! | CAACATAATTAGGAGTATGT+TGG | - | chr1.4:55177868-55177887 | MS.gene055620:intron | 30.0% |
| ! | CGTATATAATAATGGAAGGA+TGG | + | chr1.4:55178677-55178696 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCAATACACATG+GGG | - | chr1.4:55179436-55179455 | MS.gene055620:intron | 30.0% |
| ! | GAATCACATTGATTGAATCA+CGG | - | chr1.4:55177720-55177739 | MS.gene055620:CDS | 30.0% |
| ! | GATTTGTACTATACTTTTGC+AGG | - | chr1.4:55179144-55179163 | MS.gene055620:intron | 30.0% |
| ! | GTTTTATAAGTTTACCCTTC+AGG | - | chr1.4:55177788-55177807 | MS.gene055620:intron | 30.0% |
| ! | TGAAAGGAGTCTTATAGAAA+GGG | - | chr1.4:55177920-55177939 | MS.gene055620:intron | 30.0% |
| ! | TTGAAAGGAGTCTTATAGAA+AGG | - | chr1.4:55177919-55177938 | MS.gene055620:intron | 30.0% |
| ! | TTTTCTTTCAATACACATGG+GGG | - | chr1.4:55179437-55179456 | MS.gene055620:intron | 30.0% |
| !! | ACCAATTCTAAAGTGACATA+AGG | - | chr1.4:55178733-55178752 | MS.gene055620:intron | 30.0% |
| !! | TCCTTATGTCACTTTAGAAT+TGG | + | chr1.4:55178737-55178756 | None:intergenic | 30.0% |
| !! | TTGTACTTTTCAAAGTGTCT+AGG | - | chr1.4:55178467-55178486 | MS.gene055620:intron | 30.0% |
| !! | TTTTATTGGTTACCACTACT+CGG | + | chr1.4:55179752-55179771 | None:intergenic | 30.0% |
| !!! | AGCATTTTGAGGCAAATAAT+AGG | + | chr1.4:55178107-55178126 | None:intergenic | 30.0% |
| AAACTCATTCTCTTTCCTGA+AGG | + | chr1.4:55177806-55177825 | None:intergenic | 35.0% | |
| AACTCATTCTCTTTCCTGAA+GGG | + | chr1.4:55177805-55177824 | None:intergenic | 35.0% | |
| AAGTCATACAAGCACACAAA+AGG | + | chr1.4:55179793-55179812 | None:intergenic | 35.0% | |
| AATGAAGGAAGACAAGATCA+GGG | + | chr1.4:55179306-55179325 | None:intergenic | 35.0% | |
| AATGTTAAAATAGGAGGGGT+GGG | + | chr1.4:55178030-55178049 | None:intergenic | 35.0% | |
| ACCATGCTAGCATTAATCAT+TGG | + | chr1.4:55178397-55178416 | None:intergenic | 35.0% | |
| ACGTCTAGTCAATACTATGA+TGG | + | chr1.4:55177835-55177854 | None:intergenic | 35.0% | |
| AGTAAAAAGAATGAGGTCAG+AGG | + | chr1.4:55180045-55180064 | None:intergenic | 35.0% | |
| ATAGATGGTCTTTACTGTGT+TGG | - | chr1.4:55180478-55180497 | MS.gene055620:intron | 35.0% | |
| ATCCAAATGAGTTTCAACGT+GGG | - | chr1.4:55180747-55180766 | MS.gene055620:intron | 35.0% | |
| CTTGTAGGAAAGCTTGTAAA+AGG | - | chr1.4:55179357-55179376 | MS.gene055620:intron | 35.0% | |
| GAATGAAAATTACCAAGCAG+GGG | + | chr1.4:55178315-55178334 | None:intergenic | 35.0% | |
| GGACATATTTATAGCGTGTT+TGG | - | chr1.4:55180707-55180726 | MS.gene055620:CDS | 35.0% | |
| GTAATCTGATAGGTCACTTA+CGG | + | chr1.4:55179080-55179099 | None:intergenic | 35.0% | |
| GTGATTCTATACTTGGAGTT+AGG | + | chr1.4:55177707-55177726 | None:intergenic | 35.0% | |
| GTTTGGTAGATGGAAATGAA+CGG | + | chr1.4:55177035-55177054 | None:intergenic | 35.0% | |
| TAATGAAGGAAGACAAGATC+AGG | + | chr1.4:55179307-55179326 | None:intergenic | 35.0% | |
| TAATGTTAAAATAGGAGGGG+TGG | + | chr1.4:55178031-55178050 | None:intergenic | 35.0% | |
| TACATCTTGAACAGAGCAAA+GGG | - | chr1.4:55177558-55177577 | MS.gene055620:intron | 35.0% | |
| TATTGACCAGATAGCTAGAA+TGG | - | chr1.4:55178546-55178565 | MS.gene055620:CDS | 35.0% | |
| TCATCCTTATAAGTCGATAC+AGG | + | chr1.4:55177645-55177664 | None:intergenic | 35.0% | |
| TCCAATGATTAATGCTAGCA+TGG | - | chr1.4:55178393-55178412 | MS.gene055620:intron | 35.0% | |
| TCTATGAAAGACAACAACTG+TGG | + | chr1.4:55178160-55178179 | None:intergenic | 35.0% | |
| TCTGAAAAAACTGCCCAAAA+AGG | + | chr1.4:55177323-55177342 | None:intergenic | 35.0% | |
| TCTTAGTTGCAATGGATAGA+TGG | - | chr1.4:55178517-55178536 | MS.gene055620:CDS | 35.0% | |
| TGAACTAAGCAACTTGAAAC+TGG | + | chr1.4:55178848-55178867 | None:intergenic | 35.0% | |
| TGGAAGGTTTGTCTTAATTG+AGG | - | chr1.4:55177160-55177179 | MS.gene055620:intron | 35.0% | |
| TTCATTGCTCTTAGTTGCAA+TGG | - | chr1.4:55178509-55178528 | MS.gene055620:CDS | 35.0% | |
| TTGCAAACAGTTTACAGCTA+TGG | + | chr1.4:55180608-55180627 | None:intergenic | 35.0% | |
| ! | ACTCATTTGGATGTGGTTTT+AGG | + | chr1.4:55180739-55180758 | None:intergenic | 35.0% |
| ! | AGATTGTCATCATTTTGTGC+TGG | - | chr1.4:55179488-55179507 | MS.gene055620:intron | 35.0% |
| ! | CTTTTACAAGCTTTCCTACA+AGG | + | chr1.4:55179359-55179378 | None:intergenic | 35.0% |
| ! | TGTACTATACTTTTGCAGGT+AGG | - | chr1.4:55179148-55179167 | MS.gene055620:intron | 35.0% |
| ! | TGTCGTAGTAGCTTTACAAA+TGG | - | chr1.4:55178606-55178625 | MS.gene055620:CDS | 35.0% |
| !! | AAAAAGTCACCTGTTTTGGA+TGG | - | chr1.4:55180942-55180961 | MS.gene055620:CDS | 35.0% |
| !! | ACAACCTGTATCGACTTATA+AGG | - | chr1.4:55177638-55177657 | MS.gene055620:intron | 35.0% |
| !!! | AGCATCCATCGATTTTATAG+AGG | - | chr1.4:55180008-55180027 | MS.gene055620:intron | 35.0% |
| ACTTGCTTTCAGAGCATAGA+TGG | - | chr1.4:55180463-55180482 | MS.gene055620:intron | 40.0% | |
| AGATGGAAATGAACGGTTGT+CGG | + | chr1.4:55177028-55177047 | None:intergenic | 40.0% | |
| AGCATTCACCGTAGAATTTG+AGG | + | chr1.4:55177141-55177160 | None:intergenic | 40.0% | |
| AGGAGAATCACTACCAAAAG+AGG | - | chr1.4:55179377-55179396 | MS.gene055620:intron | 40.0% | |
| AGTGTCTAGGAGAGAAGTTA+TGG | - | chr1.4:55178480-55178499 | MS.gene055620:intron | 40.0% | |
| AGTTAGAGTTGGGGGTTAAA+AGG | + | chr1.4:55180231-55180250 | None:intergenic | 40.0% | |
| ATACTTGGAGTTAGGGCTAT+AGG | + | chr1.4:55177699-55177718 | None:intergenic | 40.0% | |
| ATGTTAAAATAGGAGGGGTG+GGG | + | chr1.4:55178029-55178048 | None:intergenic | 40.0% | |
| ATTGCAAAGTCCTTGGCAAA+AGG | - | chr1.4:55178983-55179002 | MS.gene055620:CDS | 40.0% | |
| ATTTCAGCTCCAACGAATTC+AGG | + | chr1.4:55177281-55177300 | None:intergenic | 40.0% | |
| CAACTTCTTCAATGGACGAT+TGG | - | chr1.4:55179713-55179732 | MS.gene055620:intron | 40.0% | |
| CATCCAAATGAGTTTCAACG+TGG | - | chr1.4:55180746-55180765 | MS.gene055620:intron | 40.0% | |
| CCTAATGTCAAGCATTCAAG+AGG | + | chr1.4:55177348-55177367 | None:intergenic | 40.0% | |
| CCTCTTGAATGCTTGACATT+AGG | - | chr1.4:55177345-55177364 | MS.gene055620:intron | 40.0% | |
| CGTTGAAACTCATTTGGATG+TGG | + | chr1.4:55180746-55180765 | None:intergenic | 40.0% | |
| CTACATCTTGAACAGAGCAA+AGG | - | chr1.4:55177557-55177576 | MS.gene055620:intron | 40.0% | |
| CTAGAACAATTGGACCAGTT+TGG | - | chr1.4:55179600-55179619 | MS.gene055620:CDS | 40.0% | |
| CTCAAGAGGATCCTACATTA+GGG | - | chr1.4:55177955-55177974 | MS.gene055620:intron | 40.0% | |
| CTGCTTCTTTGCCTCATATT+CGG | + | chr1.4:55179932-55179951 | None:intergenic | 40.0% | |
| GAGGCAAAAACGCCTTATAA+GGG | + | chr1.4:55177197-55177216 | None:intergenic | 40.0% | |
| GATTCATCATTAGCTCCTGA+AGG | - | chr1.4:55179667-55179686 | MS.gene055620:intron | 40.0% | |
| GCAAAAGGTCTAGTTGATCA+GGG | - | chr1.4:55178998-55179017 | MS.gene055620:CDS | 40.0% | |
| GGACAAGGAAAAATCTCAAG+AGG | - | chr1.4:55177941-55177960 | MS.gene055620:intron | 40.0% | |
| GGGTAGTCAGATACTTTACA+AGG | - | chr1.4:55179018-55179037 | MS.gene055620:CDS | 40.0% | |
| GTGGATCCTGAATATACTTC+CGG | + | chr1.4:55178141-55178160 | None:intergenic | 40.0% | |
| GTTATTGCTGTAGCTTTCTC+AGG | - | chr1.4:55180526-55180545 | MS.gene055620:intron | 40.0% | |
| GTTGTCTTTCATAGATGCTG+AGG | - | chr1.4:55178165-55178184 | MS.gene055620:intron | 40.0% | |
| TCAAATTCTACGGTGAATGC+TGG | - | chr1.4:55177140-55177159 | MS.gene055620:intron | 40.0% | |
| TCTCAAGAGGATCCTACATT+AGG | - | chr1.4:55177954-55177973 | MS.gene055620:intron | 40.0% | |
| TCTCTCAAGAACCGAATATG+AGG | - | chr1.4:55179918-55179937 | MS.gene055620:intron | 40.0% | |
| TGATGACAATCTGTATCTGG+TGG | + | chr1.4:55179480-55179499 | None:intergenic | 40.0% | |
| TGGATCCTGAATATACTTCC+GGG | + | chr1.4:55178140-55178159 | None:intergenic | 40.0% | |
| TTCCCACGTTGAAACTCATT+TGG | + | chr1.4:55180752-55180771 | None:intergenic | 40.0% | |
| TTGTCACCCTACATTACCAA+AGG | + | chr1.4:55178773-55178792 | None:intergenic | 40.0% | |
| TTTCAATGCCCTGAATTCGT+TGG | - | chr1.4:55177269-55177288 | MS.gene055620:intron | 40.0% | |
| TTTCAGCTCCAACGAATTCA+GGG | + | chr1.4:55177280-55177299 | None:intergenic | 40.0% | |
| ! | AAGTATCGTCGATGTGTCTT+AGG | + | chr1.4:55180267-55180286 | None:intergenic | 40.0% |
| ! | ATCAACTAGACCTTTTGCCA+AGG | + | chr1.4:55178996-55179015 | None:intergenic | 40.0% |
| ! | GAGTCTTATAGAAAGGGACA+AGG | - | chr1.4:55177926-55177945 | MS.gene055620:intron | 40.0% |
| ! | GCTATGGAATGTGAGAGTTT+TGG | + | chr1.4:55180592-55180611 | None:intergenic | 40.0% |
| ! | GGAGAAAAAGTCACCTGTTT+TGG | - | chr1.4:55180938-55180957 | MS.gene055620:CDS | 40.0% |
| ! | TCACTTCCATTCTAGCTATC+TGG | + | chr1.4:55178555-55178574 | None:intergenic | 40.0% |
| ! | TGGAAGTTCTCTTCCTCTTT+TGG | + | chr1.4:55179393-55179412 | None:intergenic | 40.0% |
| ! | TTGTCATCATTTTGTGCTGG+AGG | - | chr1.4:55179491-55179510 | MS.gene055620:intron | 40.0% |
| !! | AGAAGCACCTTTGGTAATGT+AGG | - | chr1.4:55178763-55178782 | MS.gene055620:intron | 40.0% |
| !! | GAAGCACCTTTGGTAATGTA+GGG | - | chr1.4:55178764-55178783 | MS.gene055620:intron | 40.0% |
| AAATGAACGGTTGTCGGATC+AGG | + | chr1.4:55177022-55177041 | None:intergenic | 45.0% | |
| AACTGCCCAAAAAGGTAGAG+TGG | + | chr1.4:55177315-55177334 | None:intergenic | 45.0% | |
| ACAGCAATAACACCTTGTCC+AGG | + | chr1.4:55180517-55180536 | None:intergenic | 45.0% | |
| ACCAGTTTGGAGGAACCATA+TGG | - | chr1.4:55179613-55179632 | MS.gene055620:CDS | 45.0% | |
| ACGAGTATTATCACCGAGCA+GGG | - | chr1.4:55179049-55179068 | MS.gene055620:CDS | 45.0% | |
| ACGTACATCTTCAGAGCGAA+TGG | + | chr1.4:55178072-55178091 | None:intergenic | 45.0% | |
| AGCATTCCAAAGGGGTTGTT+AGG | - | chr1.4:55180324-55180343 | MS.gene055620:intron | 45.0% | |
| AGTTGGGGGTTAAAAGGTTC+AGG | + | chr1.4:55180225-55180244 | None:intergenic | 45.0% | |
| ATATGAGGCAAAGAAGCAGG+TGG | - | chr1.4:55179933-55179952 | MS.gene055620:intron | 45.0% | |
| ATTCTACGGTGAATGCTGGA+AGG | - | chr1.4:55177144-55177163 | MS.gene055620:intron | 45.0% | |
| CAGCAATAACACCTTGTCCA+GGG | + | chr1.4:55180516-55180535 | None:intergenic | 45.0% | |
| CATCGAGTAGCTGCAGATAT+TGG | - | chr1.4:55180562-55180581 | MS.gene055620:intron | 45.0% | |
| CCCAACTCTAACTCTAGGTA+GGG | - | chr1.4:55180238-55180257 | MS.gene055620:intron | 45.0% | |
| CCCTACCTAGAGTTAGAGTT+GGG | + | chr1.4:55180241-55180260 | None:intergenic | 45.0% | |
| CCTACCTAGAGTTAGAGTTG+GGG | + | chr1.4:55180240-55180259 | None:intergenic | 45.0% | |
| CGAATATGAGGCAAAGAAGC+AGG | - | chr1.4:55179930-55179949 | MS.gene055620:intron | 45.0% | |
| CTAACCAAATGTGTCCCATC+TGG | + | chr1.4:55179230-55179249 | None:intergenic | 45.0% | |
| CTACCTAGAGTTAGAGTTGG+GGG | + | chr1.4:55180239-55180258 | None:intergenic | 45.0% | |
| CTGAATATACTTCCGGGCTA+TGG | + | chr1.4:55178134-55178153 | None:intergenic | 45.0% | |
| GAACAATTGGACCAGTTTGG+AGG | - | chr1.4:55179603-55179622 | MS.gene055620:CDS | 45.0% | |
| GACGGCATCCTCAAATTCTA+CGG | - | chr1.4:55177130-55177149 | MS.gene055620:intron | 45.0% | |
| GGAGGCAAAAACGCCTTATA+AGG | + | chr1.4:55177198-55177217 | None:intergenic | 45.0% | |
| GGCAAAAGGTCTAGTTGATC+AGG | - | chr1.4:55178997-55179016 | MS.gene055620:CDS | 45.0% | |
| GTGGGATTAACTACCCTCTT+GGG | - | chr1.4:55178948-55178967 | MS.gene055620:CDS | 45.0% | |
| GTTCTGTGTGACAGACACTT+TGG | - | chr1.4:55178926-55178945 | MS.gene055620:intron | 45.0% | |
| GTTGGGGGTTAAAAGGTTCA+GGG | + | chr1.4:55180224-55180243 | None:intergenic | 45.0% | |
| TAACCCCCAACTCTAACTCT+AGG | - | chr1.4:55180233-55180252 | MS.gene055620:intron | 45.0% | |
| TACTTTCCCCACGAAAAGGA+CGG | - | chr1.4:55177112-55177131 | MS.gene055620:intron | 45.0% | |
| TCCATATGGTTCCTCCAAAC+TGG | + | chr1.4:55179617-55179636 | None:intergenic | 45.0% | |
| TCCCTACCTAGAGTTAGAGT+TGG | + | chr1.4:55180242-55180261 | None:intergenic | 45.0% | |
| TGAAGGATATGACGACCTTC+AGG | + | chr1.4:55179685-55179704 | None:intergenic | 45.0% | |
| TGGGATTAACTACCCTCTTG+GGG | - | chr1.4:55178949-55178968 | MS.gene055620:CDS | 45.0% | |
| TGTGTGACAGACACTTTGGT+GGG | - | chr1.4:55178930-55178949 | MS.gene055620:intron | 45.0% | |
| TGTTAAAATAGGAGGGGTGG+GGG | + | chr1.4:55178028-55178047 | None:intergenic | 45.0% | |
| TTCTTCAATGGACGATTGGC+AGG | - | chr1.4:55179717-55179736 | MS.gene055620:intron | 45.0% | |
| ! | AGGAGCCACTCTACCTTTTT+GGG | - | chr1.4:55177307-55177326 | MS.gene055620:intron | 45.0% |
| ! | CAAAAGCACGGCAATAGTGA+TGG | + | chr1.4:55180788-55180807 | None:intergenic | 45.0% |
| ! | CATAGCCCGGAAGTATATTC+AGG | - | chr1.4:55178132-55178151 | MS.gene055620:intron | 45.0% |
| ! | CATTTTGTGCTGGAGGTAGT+TGG | - | chr1.4:55179498-55179517 | MS.gene055620:intron | 45.0% |
| ! | GAGTTACTTTCCCCACGAAA+AGG | - | chr1.4:55177108-55177127 | MS.gene055620:intron | 45.0% |
| ! | GCTTGGTTGGTTAAGAACAC+TGG | - | chr1.4:55180980-55180999 | MS.gene055620:CDS | 45.0% |
| ! | TACTTTTGCAGGTAGGAGTG+AGG | - | chr1.4:55179155-55179174 | MS.gene055620:intron | 45.0% |
| !! | TTTTGGATGGCATGCTGCTT+GGG | - | chr1.4:55180955-55180974 | MS.gene055620:CDS | 45.0% |
| AAAATGCTGGAGCCATAGCC+CGG | - | chr1.4:55178119-55178138 | MS.gene055620:intron | 50.0% | |
| AATGCCACGCAGCATTCCAA+AGG | - | chr1.4:55180314-55180333 | MS.gene055620:intron | 50.0% | |
| ACACATGGGGGTTAAAGCAG+AGG | - | chr1.4:55179449-55179468 | MS.gene055620:intron | 50.0% | |
| ACTCGAACTGAGAGGTGGTT+TGG | + | chr1.4:55177052-55177071 | None:intergenic | 50.0% | |
| AGAGAGAGCAAGAGAGACAG+AGG | + | chr1.4:55178871-55178890 | None:intergenic | 50.0% | |
| AGCAGCATGCCATCCAAAAC+AGG | + | chr1.4:55180954-55180973 | None:intergenic | 50.0% | |
| AGGTAGGCAATACCGAGTAG+TGG | - | chr1.4:55179737-55179756 | MS.gene055620:intron | 50.0% | |
| AGTGTCTGTCACACAGAACC+TGG | + | chr1.4:55178925-55178944 | None:intergenic | 50.0% | |
| ATGCCACGCAGCATTCCAAA+GGG | - | chr1.4:55180315-55180334 | MS.gene055620:intron | 50.0% | |
| CACGAGTATTATCACCGAGC+AGG | - | chr1.4:55179048-55179067 | MS.gene055620:CDS | 50.0% | |
| CACGGCAATAGTGATGGTAC+AGG | + | chr1.4:55180782-55180801 | None:intergenic | 50.0% | |
| CCCCAACTCTAACTCTAGGT+AGG | - | chr1.4:55180237-55180256 | MS.gene055620:intron | 50.0% | |
| CTGTGTGACAGACACTTTGG+TGG | - | chr1.4:55178929-55178948 | MS.gene055620:intron | 50.0% | |
| GCTACCAGATGGGACACATT+TGG | - | chr1.4:55179223-55179242 | MS.gene055620:intron | 50.0% | |
| GGATCCTACATTAGGGACAG+AGG | - | chr1.4:55177962-55177981 | MS.gene055620:intron | 50.0% | |
| GGCATTCCTAACAACCCCTT+TGG | + | chr1.4:55180333-55180352 | None:intergenic | 50.0% | |
| GGGATTAACTACCCTCTTGG+GGG | - | chr1.4:55178950-55178969 | MS.gene055620:CDS | 50.0% | |
| GGTGGGATTAACTACCCTCT+TGG | - | chr1.4:55178947-55178966 | MS.gene055620:CDS | 50.0% | |
| GTAGGAGTGAGGCTTTCAGA+CGG | - | chr1.4:55179166-55179185 | MS.gene055620:intron | 50.0% | |
| GTCCATAAGTACCCTCGTCA+CGG | + | chr1.4:55180293-55180312 | None:intergenic | 50.0% | |
| GTGACTGCAGCTCCCTTATA+AGG | - | chr1.4:55177182-55177201 | MS.gene055620:intron | 50.0% | |
| GTTGGAGCTGAAATCGCTTG+AGG | - | chr1.4:55177287-55177306 | MS.gene055620:intron | 50.0% | |
| TCAATGGACGATTGGCAGGT+AGG | - | chr1.4:55179721-55179740 | MS.gene055620:intron | 50.0% | |
| TCAGTTCATTGACCCCTGCT+TGG | - | chr1.4:55178300-55178319 | MS.gene055620:CDS | 50.0% | |
| TCCATAAGTACCCTCGTCAC+GGG | + | chr1.4:55180292-55180311 | None:intergenic | 50.0% | |
| TCCTACATTAGGGACAGAGG+CGG | - | chr1.4:55177965-55177984 | MS.gene055620:intron | 50.0% | |
| TGGTGGGATTGCAAAGTCCT+TGG | - | chr1.4:55178976-55178995 | MS.gene055620:CDS | 50.0% | |
| TTAGGGACAGAGGCGGTATA+TGG | - | chr1.4:55177972-55177991 | MS.gene055620:intron | 50.0% | |
| ! | GAGGAGCCACTCTACCTTTT+TGG | - | chr1.4:55177306-55177325 | MS.gene055620:intron | 50.0% |
| ! | GCTATGGCTCCAGCATTTTG+AGG | + | chr1.4:55178118-55178137 | None:intergenic | 50.0% |
| ! | TTTGGAATGCTGCGTGGCAT+TGG | + | chr1.4:55180315-55180334 | None:intergenic | 50.0% |
| !! | CTGAGAGGTGGTTTGGTAGA+TGG | + | chr1.4:55177045-55177064 | None:intergenic | 50.0% |
| !! | GGATGATGCAGAAGCACCTT+TGG | - | chr1.4:55178754-55178773 | MS.gene055620:intron | 50.0% |
| !! | GTTTTGGATGGCATGCTGCT+TGG | - | chr1.4:55180954-55180973 | MS.gene055620:CDS | 50.0% |
| !! | TGGAGTCTGCAAAGCGTTGA+CGG | + | chr1.4:55178377-55178396 | None:intergenic | 50.0% |
| AAAATAGGAGGGGTGGGGGT+GGG | + | chr1.4:55178024-55178043 | None:intergenic | 55.0% | |
| ACCGCCTCTGTCCCTAATGT+AGG | + | chr1.4:55177969-55177988 | None:intergenic | 55.0% | |
| ACGATACTTAGCCCGTGACG+AGG | - | chr1.4:55180278-55180297 | MS.gene055620:intron | 55.0% | |
| ACTTACGGCTTTGCCCTGCT+CGG | + | chr1.4:55179065-55179084 | None:intergenic | 55.0% | |
| CGATACTTAGCCCGTGACGA+GGG | - | chr1.4:55180279-55180298 | MS.gene055620:intron | 55.0% | |
| CTCTGTGCACTCGAACTGAG+AGG | + | chr1.4:55177060-55177079 | None:intergenic | 55.0% | |
| GACAGTTGCTTCCCTGGACA+AGG | - | chr1.4:55180502-55180521 | MS.gene055620:intron | 55.0% | |
| GGGTGGGTGTGTATAGAAGG+TGG | + | chr1.4:55178008-55178027 | None:intergenic | 55.0% | |
| GTTGGAGACAGTTGCTTCCC+TGG | - | chr1.4:55180496-55180515 | MS.gene055620:intron | 55.0% | |
| TAAAATAGGAGGGGTGGGGG+TGG | + | chr1.4:55178025-55178044 | None:intergenic | 55.0% | |
| TCGATGGATGCTCGAAGACC+TGG | + | chr1.4:55180000-55180019 | None:intergenic | 55.0% | |
| TGCCACGCAGCATTCCAAAG+GGG | - | chr1.4:55180316-55180335 | MS.gene055620:intron | 55.0% | |
| TGGGGGTGGGTGTGTATAGA+AGG | + | chr1.4:55178011-55178030 | None:intergenic | 55.0% | |
| TGTGCACTCGAACTGAGAGG+TGG | + | chr1.4:55177057-55177076 | None:intergenic | 55.0% | |
| ! | AACTACCCTCTTGGGGGTGT+TGG | - | chr1.4:55178956-55178975 | MS.gene055620:CDS | 55.0% |
| ! | AGGATGCCGTCCTTTTCGTG+GGG | + | chr1.4:55177121-55177140 | None:intergenic | 55.0% |
| ! | GAGGATGCCGTCCTTTTCGT+GGG | + | chr1.4:55177122-55177141 | None:intergenic | 55.0% |
| ! | TGAGGATGCCGTCCTTTTCG+TGG | + | chr1.4:55177123-55177142 | None:intergenic | 55.0% |
| ! | TGCTGCTTGGGTTGCTTGGT+TGG | - | chr1.4:55180967-55180986 | MS.gene055620:CDS | 55.0% |
| !! | AACCCCTTTGGAATGCTGCG+TGG | + | chr1.4:55180321-55180340 | None:intergenic | 55.0% |
| ATCCCACCAACACCCCCAAG+AGG | + | chr1.4:55178965-55178984 | None:intergenic | 60.0% | |
| TCCCACCAACACCCCCAAGA+GGG | + | chr1.4:55178964-55178983 | None:intergenic | 60.0% | |
| ! | GGCATGCTGCTTGGGTTGCT+TGG | - | chr1.4:55180963-55180982 | MS.gene055620:CDS | 60.0% |
| !! | ACCCTCTTGGGGGTGTTGGT+GGG | - | chr1.4:55178960-55178979 | MS.gene055620:CDS | 60.0% |
| !! | GCCCGTGACGAGGGTACTTA+TGG | - | chr1.4:55180288-55180307 | MS.gene055620:intron | 60.0% |
| !! | TACCCTCTTGGGGGTGTTGG+TGG | - | chr1.4:55178959-55178978 | MS.gene055620:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 55177007 | 55181007 | 55177007 | ID=MS.gene055620 |
| chr1.4 | mRNA | 55177007 | 55181007 | 55177007 | ID=MS.gene055620.t1;Parent=MS.gene055620 |
| chr1.4 | exon | 55180849 | 55181007 | 55180849 | ID=MS.gene055620.t1.exon1;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55180849 | 55181007 | 55180849 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55180648 | 55180747 | 55180648 | ID=MS.gene055620.t1.exon2;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55180648 | 55180747 | 55180648 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55179828 | 55179910 | 55179828 | ID=MS.gene055620.t1.exon3;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55179828 | 55179910 | 55179828 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55179600 | 55179656 | 55179600 | ID=MS.gene055620.t1.exon4;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55179600 | 55179656 | 55179600 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55178936 | 55179088 | 55178936 | ID=MS.gene055620.t1.exon5;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55178936 | 55179088 | 55178936 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55178770 | 55178848 | 55178770 | ID=MS.gene055620.t1.exon6;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55178770 | 55178848 | 55178770 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55178502 | 55178650 | 55178502 | ID=MS.gene055620.t1.exon7;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55178502 | 55178650 | 55178502 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55178276 | 55178410 | 55178276 | ID=MS.gene055620.t1.exon8;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55178276 | 55178410 | 55178276 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55177985 | 55178098 | 55177985 | ID=MS.gene055620.t1.exon9;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55177985 | 55178098 | 55177985 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55177649 | 55177759 | 55177649 | ID=MS.gene055620.t1.exon10;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55177649 | 55177759 | 55177649 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55177431 | 55177539 | 55177431 | ID=MS.gene055620.t1.exon11;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55177431 | 55177539 | 55177431 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| chr1.4 | exon | 55177007 | 55177080 | 55177007 | ID=MS.gene055620.t1.exon12;Parent=MS.gene055620.t1 |
| chr1.4 | CDS | 55177007 | 55177080 | 55177007 | ID=cds.MS.gene055620.t1;Parent=MS.gene055620.t1 |
| Gene Sequence |
| Protein sequence |
