Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68677.t1 | XP_013464066.1 | 97.8 | 499 | 11 | 0 | 2 | 500 | 95 | 593 | 4.70E-281 | 976.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68677.t1 | Q8VYL1 | 71.9 | 498 | 128 | 1 | 2 | 499 | 102 | 587 | 1.4e-212 | 740.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68677.t1 | A0A072V8Z3 | 97.8 | 499 | 11 | 0 | 2 | 500 | 95 | 593 | 3.4e-281 | 976.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene68677 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene68677 | 0.813869 | 2.06E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene68677 | 0.825046 | 5.80E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene68677 | 0.874928 | 4.60E-68 | -1.69E-46 |
| MS.gene049369 | MS.gene68677 | 0.875071 | 4.11E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene68677 | 0.869717 | 2.51E-66 | -1.69E-46 |
| MS.gene049427 | MS.gene68677 | 0.83532 | 1.80E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene68677 | 0.869316 | 3.39E-66 | -1.69E-46 |
| MS.gene049661 | MS.gene68677 | 0.818025 | 2.43E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene68677 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene049794 | MS.gene68677 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene68677 | 0.822608 | 2.16E-53 | -1.69E-46 |
| MS.gene049907 | MS.gene68677 | 0.813475 | 2.51E-51 | -1.69E-46 |
| MS.gene050122 | MS.gene68677 | 0.823239 | 1.54E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene68677 | 0.824925 | 6.20E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene68677 | 0.847782 | 9.30E-60 | -1.69E-46 |
| MS.gene050499 | MS.gene68677 | 0.825477 | 4.59E-54 | -1.69E-46 |
| MS.gene050502 | MS.gene68677 | 0.813201 | 2.89E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene68677 | 0.844685 | 6.49E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene68677 | 0.805633 | 1.21E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene68677 | 0.859362 | 4.36E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene68677 | 0.887586 | 1.25E-72 | -1.69E-46 |
| MS.gene050670 | MS.gene68677 | 0.888081 | 8.10E-73 | -1.69E-46 |
| MS.gene050686 | MS.gene68677 | 0.83489 | 2.31E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene68677 | 0.850011 | 2.24E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene68677 | 0.868488 | 6.29E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene68677 | 0.823381 | 1.43E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene68677 | 0.8513 | 9.71E-61 | -1.69E-46 |
| MS.gene050971 | MS.gene68677 | 0.804382 | 2.22E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene68677 | 0.91009 | 2.76E-82 | -1.69E-46 |
| MS.gene051255 | MS.gene68677 | 0.856181 | 3.83E-62 | -1.69E-46 |
| MS.gene051360 | MS.gene68677 | 0.864083 | 1.57E-64 | -1.69E-46 |
| MS.gene051387 | MS.gene68677 | 0.884432 | 1.93E-71 | -1.69E-46 |
| MS.gene051525 | MS.gene68677 | 0.831758 | 1.39E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene68677 | 0.814665 | 1.37E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene68677 | 0.834628 | 2.68E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene68677 | 0.806428 | 8.27E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene68677 | 0.840566 | 8.05E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene68677 | 0.822983 | 1.77E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene68677 | 0.811738 | 6.03E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene68677 | 0.80149 | 8.79E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene68677 | 0.800329 | 1.52E-48 | -1.69E-46 |
| MS.gene052134 | MS.gene68677 | 0.816063 | 6.71E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene68677 | 0.822993 | 1.76E-53 | -1.69E-46 |
| MS.gene052136 | MS.gene68677 | 0.84434 | 8.03E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene68677 | 0.851999 | 6.15E-61 | -1.69E-46 |
| MS.gene052253 | MS.gene68677 | 0.821804 | 3.32E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene68677 | 0.827979 | 1.16E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene68677 | 0.827046 | 1.94E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene68677 | 0.853001 | 3.19E-61 | -1.69E-46 |
| MS.gene052414 | MS.gene68677 | 0.878702 | 2.27E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene68677 | 0.860644 | 1.79E-63 | -1.69E-46 |
| MS.gene052481 | MS.gene68677 | 0.839219 | 1.81E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene68677 | 0.845119 | 4.95E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene68677 | 0.865468 | 5.78E-65 | -1.69E-46 |
| MS.gene052501 | MS.gene68677 | 0.82958 | 4.76E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene68677 | 0.809113 | 2.22E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene68677 | 0.840539 | 8.18E-58 | -1.69E-46 |
| MS.gene052508 | MS.gene68677 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene052510 | MS.gene68677 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene68677 | 0.835124 | 2.01E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene68677 | 0.844974 | 5.42E-59 | -1.69E-46 |
| MS.gene052999 | MS.gene68677 | 0.817518 | 3.16E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene68677 | 0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene68677 | 0.849392 | 3.33E-60 | -1.69E-46 |
| MS.gene053107 | MS.gene68677 | 0.823962 | 1.04E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene68677 | 0.812195 | 4.79E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene68677 | 0.85248 | 4.49E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene68677 | 0.842963 | 1.88E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene68677 | 0.847705 | 9.77E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene68677 | 0.837774 | 4.26E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene68677 | 0.827094 | 1.89E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene68677 | 0.849286 | 3.57E-60 | -1.69E-46 |
| MS.gene053574 | MS.gene68677 | 0.881425 | 2.43E-70 | -1.69E-46 |
| MS.gene053626 | MS.gene68677 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene68677 | 0.804028 | 2.63E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene68677 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene053813 | MS.gene68677 | 0.837159 | 6.13E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene68677 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene68677 | 0.804404 | 2.20E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene68677 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene68677 | 0.811241 | 7.72E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene68677 | 0.810194 | 1.30E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene68677 | 0.850573 | 1.56E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene68677 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene68677 | 0.872438 | 3.18E-67 | -1.69E-46 |
| MS.gene055116 | MS.gene68677 | 0.888807 | 4.25E-73 | -1.69E-46 |
| MS.gene055206 | MS.gene68677 | 0.819721 | 1.00E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene68677 | 0.820209 | 7.74E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene68677 | 0.819117 | 1.37E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene68677 | 0.833686 | 4.63E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene68677 | 0.848827 | 4.78E-60 | -1.69E-46 |
| MS.gene055486 | MS.gene68677 | 0.812222 | 4.73E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene68677 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene055564 | MS.gene68677 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene68677 | 0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene055620 | MS.gene68677 | 0.814462 | 1.52E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene68677 | 0.820736 | 5.86E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene68677 | 0.850046 | 2.19E-60 | -1.69E-46 |
| MS.gene055741 | MS.gene68677 | 0.851264 | 9.94E-61 | -1.69E-46 |
| MS.gene055744 | MS.gene68677 | 0.850361 | 1.78E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene68677 | 0.86718 | 1.66E-65 | -1.69E-46 |
| MS.gene055911 | MS.gene68677 | 0.870181 | 1.77E-66 | -1.69E-46 |
| MS.gene05592 | MS.gene68677 | 0.841219 | 5.43E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene68677 | 0.821166 | 4.67E-53 | -1.69E-46 |
| MS.gene05594 | MS.gene68677 | 0.805234 | 1.47E-49 | -1.69E-46 |
| MS.gene05602 | MS.gene68677 | 0.829658 | 4.55E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene68677 | 0.844114 | 9.24E-59 | -1.69E-46 |
| MS.gene056191 | MS.gene68677 | 0.838349 | 3.03E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene68677 | 0.860517 | 1.96E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene68677 | 0.84863 | 5.42E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene68677 | 0.873655 | 1.24E-67 | -1.69E-46 |
| MS.gene056448 | MS.gene68677 | 0.839358 | 1.66E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene68677 | 0.818545 | 1.85E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene68677 | 0.904264 | 1.47E-79 | -1.69E-46 |
| MS.gene056514 | MS.gene68677 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene68677 | 0.815819 | 7.60E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene68677 | 0.837297 | 5.65E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene68677 | 0.815616 | 8.44E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene68677 | 0.836846 | 7.37E-57 | -1.69E-46 |
| MS.gene05666 | MS.gene68677 | 0.858174 | 9.88E-63 | -1.69E-46 |
| MS.gene056796 | MS.gene68677 | 0.807433 | 5.07E-50 | -1.69E-46 |
| MS.gene056876 | MS.gene68677 | 0.829906 | 3.96E-55 | -1.69E-46 |
| MS.gene056877 | MS.gene68677 | 0.814435 | 1.54E-51 | -1.69E-46 |
| MS.gene056942 | MS.gene68677 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene056947 | MS.gene68677 | 0.841675 | 4.12E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene68677 | 0.811628 | 6.36E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene68677 | 0.802137 | 6.47E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene68677 | 0.886501 | 3.24E-72 | -1.69E-46 |
| MS.gene057124 | MS.gene68677 | 0.84247 | 2.54E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene68677 | 0.830104 | 3.54E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene68677 | 0.869646 | 2.65E-66 | -1.69E-46 |
| MS.gene05735 | MS.gene68677 | 0.81417 | 1.77E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene68677 | 0.843342 | 1.49E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene68677 | 0.821509 | 3.89E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene68677 | 0.814328 | 1.63E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene68677 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene057503 | MS.gene68677 | 0.803984 | 2.68E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene68677 | 0.861956 | 7.12E-64 | -1.69E-46 |
| MS.gene057749 | MS.gene68677 | 0.859997 | 2.81E-63 | -1.69E-46 |
| MS.gene057823 | MS.gene68677 | 0.865252 | 6.76E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene68677 | 0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene68677 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene68677 | 0.827843 | 1.25E-54 | -1.69E-46 |
| MS.gene057927 | MS.gene68677 | 0.841799 | 3.82E-58 | -1.69E-46 |
| MS.gene058007 | MS.gene68677 | 0.849314 | 3.50E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene68677 | 0.862996 | 3.41E-64 | -1.69E-46 |
| MS.gene058075 | MS.gene68677 | 0.802342 | 5.87E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene68677 | 0.811597 | 6.47E-51 | -1.69E-46 |
| MS.gene058090 | MS.gene68677 | 0.809267 | 2.06E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene68677 | 0.834685 | 2.60E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene68677 | 0.848933 | 4.47E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene68677 | 0.807976 | 3.89E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene68677 | 0.806136 | 9.52E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene68677 | 0.814984 | 1.17E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene68677 | 0.835335 | 1.78E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene68677 | 0.822007 | 2.98E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene68677 | 0.810842 | 9.43E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene68677 | 0.838539 | 2.71E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene68677 | 0.851999 | 6.15E-61 | -1.69E-46 |
| MS.gene058790 | MS.gene68677 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene68677 | 0.814867 | 1.24E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene68677 | 0.826614 | 2.46E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene68677 | 0.877596 | 5.54E-69 | -1.69E-46 |
| MS.gene058949 | MS.gene68677 | 0.807897 | 4.04E-50 | -1.69E-46 |
| MS.gene058995 | MS.gene68677 | 0.817964 | 2.51E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene68677 | 0.829581 | 4.75E-55 | -1.69E-46 |
| MS.gene059080 | MS.gene68677 | 0.803535 | 3.33E-49 | -1.69E-46 |
| MS.gene059082 | MS.gene68677 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene68677 | 0.815111 | 1.09E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene68677 | 0.811908 | 5.53E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene68677 | 0.801766 | 7.71E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene68677 | 0.851068 | 1.13E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene68677 | 0.853979 | 1.67E-61 | -1.69E-46 |
| MS.gene059367 | MS.gene68677 | 0.825726 | 4.00E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene68677 | 0.848565 | 5.65E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene68677 | 0.851754 | 7.22E-61 | -1.69E-46 |
| MS.gene059455 | MS.gene68677 | 0.836328 | 9.98E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene68677 | 0.847331 | 1.24E-59 | -1.69E-46 |
| MS.gene059674 | MS.gene68677 | 0.853343 | 2.54E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene68677 | 0.84988 | 2.43E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene68677 | 0.879608 | 1.08E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene68677 | 0.862427 | 5.11E-64 | -1.69E-46 |
| MS.gene059695 | MS.gene68677 | 0.86701 | 1.88E-65 | -1.69E-46 |
| MS.gene059711 | MS.gene68677 | 0.875536 | 2.85E-68 | -1.69E-46 |
| MS.gene059718 | MS.gene68677 | 0.823668 | 1.22E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene68677 | 0.852325 | 4.97E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene68677 | 0.80735 | 5.28E-50 | -1.69E-46 |
| MS.gene059933 | MS.gene68677 | 0.801368 | 9.31E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene68677 | 0.811739 | 6.02E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene68677 | 0.81307 | 3.08E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene68677 | 0.80605 | 9.93E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene68677 | 0.848031 | 7.94E-60 | -1.69E-46 |
| MS.gene060482 | MS.gene68677 | 0.830195 | 3.37E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene68677 | 0.904278 | 1.45E-79 | -1.69E-46 |
| MS.gene060818 | MS.gene68677 | 0.829212 | 5.84E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene68677 | 0.910533 | 1.68E-82 | -1.69E-46 |
| MS.gene060837 | MS.gene68677 | 0.901582 | 2.32E-78 | -1.69E-46 |
| MS.gene06092 | MS.gene68677 | 0.832825 | 7.58E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene68677 | 0.865233 | 6.85E-65 | -1.69E-46 |
| MS.gene061049 | MS.gene68677 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene68677 | -0.849782 | 2.59E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene68677 | 0.877451 | 6.22E-69 | -1.69E-46 |
| MS.gene061200 | MS.gene68677 | 0.833528 | 5.07E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68677.t1 | MTR_2g461290 | 97.796 | 499 | 11 | 0 | 2 | 500 | 95 | 593 | 0.0 | 1013 |
| MS.gene68677.t1 | MTR_4g035170 | 57.447 | 188 | 80 | 0 | 2 | 189 | 110 | 297 | 1.69e-69 | 224 |
| MS.gene68677.t1 | MTR_4g103800 | 38.265 | 196 | 104 | 5 | 2 | 184 | 52 | 243 | 3.28e-32 | 124 |
| MS.gene68677.t1 | MTR_4g103800 | 41.985 | 131 | 65 | 3 | 2 | 125 | 52 | 178 | 2.33e-24 | 100 |
| MS.gene68677.t1 | MTR_7g100530 | 33.526 | 173 | 94 | 4 | 4 | 158 | 61 | 230 | 1.54e-22 | 97.4 |
| MS.gene68677.t1 | MTR_1g067050 | 32.370 | 173 | 96 | 4 | 4 | 158 | 78 | 247 | 3.11e-20 | 91.3 |
| MS.gene68677.t1 | MTR_8g009520 | 26.344 | 186 | 101 | 5 | 3 | 182 | 45 | 200 | 1.90e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68677.t1 | AT5G35170 | 71.888 | 498 | 128 | 1 | 2 | 499 | 102 | 587 | 0.0 | 766 |
| MS.gene68677.t1 | AT5G35170 | 72.098 | 491 | 125 | 1 | 2 | 492 | 102 | 580 | 0.0 | 758 |
| MS.gene68677.t1 | AT5G47840 | 63.298 | 188 | 69 | 0 | 2 | 189 | 87 | 274 | 1.60e-74 | 237 |
| MS.gene68677.t1 | AT5G47840 | 60.106 | 188 | 61 | 1 | 2 | 189 | 87 | 260 | 4.68e-68 | 219 |
| MS.gene68677.t1 | AT5G63400 | 36.458 | 192 | 111 | 5 | 2 | 183 | 56 | 246 | 1.15e-29 | 117 |
| MS.gene68677.t1 | AT5G50370 | 38.068 | 176 | 94 | 5 | 2 | 166 | 57 | 228 | 2.81e-28 | 113 |
| MS.gene68677.t1 | AT5G50370 | 39.394 | 165 | 85 | 5 | 2 | 155 | 57 | 217 | 1.88e-27 | 110 |
| MS.gene68677.t1 | AT5G63400 | 44.000 | 125 | 65 | 2 | 2 | 122 | 56 | 179 | 1.61e-25 | 103 |
| MS.gene68677.t1 | AT2G37250 | 34.682 | 173 | 92 | 4 | 4 | 158 | 76 | 245 | 2.66e-25 | 105 |
| MS.gene68677.t1 | AT2G39270 | 33.333 | 171 | 97 | 3 | 4 | 158 | 89 | 258 | 2.35e-22 | 97.8 |
| MS.gene68677.t1 | AT5G26667 | 25.907 | 193 | 112 | 6 | 3 | 192 | 38 | 202 | 1.28e-14 | 73.2 |
| MS.gene68677.t1 | AT5G26667 | 25.000 | 184 | 108 | 4 | 3 | 183 | 38 | 194 | 1.47e-14 | 72.8 |
| MS.gene68677.t1 | AT5G26667 | 25.000 | 184 | 108 | 4 | 3 | 183 | 38 | 194 | 1.47e-14 | 72.8 |
| MS.gene68677.t1 | AT5G26667 | 25.000 | 184 | 108 | 4 | 3 | 183 | 38 | 194 | 1.47e-14 | 72.8 |
| MS.gene68677.t1 | AT4G25280 | 32.353 | 102 | 66 | 2 | 3 | 103 | 77 | 176 | 5.13e-12 | 66.6 |
| MS.gene68677.t1 | AT4G25280 | 32.353 | 102 | 66 | 2 | 3 | 103 | 77 | 176 | 5.13e-12 | 66.6 |
Find 102 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCCACAGTAGGCCTTTC+AGG | 0.186304 | 2.3:+39159208 | None:intergenic |
| CCAAAACCCTGAGGCTTTCT+TGG | 0.199207 | 2.3:+39159022 | None:intergenic |
| ACCGATTCCTGGTATGAAAA+AGG | 0.220747 | 2.3:-39163410 | MS.gene68677:CDS |
| TTAGCTTGTTACAGGATAAA+TGG | 0.229969 | 2.3:-39163262 | MS.gene68677:intron |
| CCAAGAAAGCCTCAGGGTTT+TGG | 0.266192 | 2.3:-39159022 | MS.gene68677:intron |
| GTTGGATATACAGGATTTAA+AGG | 0.272534 | 2.3:-39160176 | MS.gene68677:intron |
| TTGAAAGTTGCTACTTGTTT+CGG | 0.279379 | 2.3:-39159574 | MS.gene68677:CDS |
| TGATAGATCTTGCCAGTTAC+TGG | 0.281302 | 2.3:+39164658 | None:intergenic |
| TGCGAAGATGTTAAGCAAAA+AGG | 0.292697 | 2.3:-39165442 | MS.gene68677:CDS |
| TCTTTGAAAACTTCTTCTTT+TGG | 0.295160 | 2.3:+39163848 | None:intergenic |
| TTCATGGATTGGGGTGATTA+TGG | 0.315840 | 2.3:-39162195 | MS.gene68677:CDS |
| GTAGCAGCTGGAACAGAAAT+AGG | 0.320053 | 2.3:-39165653 | MS.gene68677:CDS |
| GAGCTCCCATTATGGGATAC+TGG | 0.321050 | 2.3:+39159531 | None:intergenic |
| TTACCTGAGAGCTCCCATTA+TGG | 0.321934 | 2.3:+39159523 | None:intergenic |
| TTAGCATTGATTAGGATAAC+TGG | 0.329268 | 2.3:+39160127 | None:intergenic |
| GCAAGATGACATGTATTTCT+TGG | 0.330998 | 2.3:-39160382 | MS.gene68677:CDS |
| TTACTCAAACATAACAAATA+AGG | 0.331154 | 2.3:-39163975 | MS.gene68677:intron |
| ACCATTTCTGGATTCAGTTC+AGG | 0.335973 | 2.3:+39162572 | None:intergenic |
| CCTTAAGCTTAGCATTGATT+AGG | 0.344833 | 2.3:+39160119 | None:intergenic |
| CCTAATCAATGCTAAGCTTA+AGG | 0.348240 | 2.3:-39160119 | MS.gene68677:intron |
| ATGGGAGAAGGTGCTCTTGC+TGG | 0.349850 | 2.3:-39162258 | MS.gene68677:CDS |
| ATTTCCTCATTTCTCGAGAA+TGG | 0.354960 | 2.3:+39163207 | None:intergenic |
| AGAGTGAAAATAGTGAAATC+TGG | 0.360626 | 2.3:-39163791 | MS.gene68677:CDS |
| ATTTGTTATGTTTGAGTAAG+AGG | 0.360822 | 2.3:+39163979 | None:intergenic |
| ATACAGGATGTTTATCGAAT+TGG | 0.361361 | 2.3:-39162486 | MS.gene68677:intron |
| TTGGCATATTTACAGATTGA+TGG | 0.365193 | 2.3:-39163878 | MS.gene68677:intron |
| GAAATTAATGATTCCTTTGA+AGG | 0.373785 | 2.3:-39159187 | MS.gene68677:CDS |
| GTCCTGCAGGTTTGTGTACA+GGG | 0.375768 | 2.3:-39162285 | MS.gene68677:intron |
| GGATTAGTGCACATATCAAC+TGG | 0.382470 | 2.3:-39165695 | MS.gene68677:CDS |
| TGTCCTGCAGGTTTGTGTAC+AGG | 0.384124 | 2.3:-39162286 | MS.gene68677:intron |
| TTTCCTCATTTCTCGAGAAT+GGG | 0.392958 | 2.3:+39163208 | None:intergenic |
| TCGACAGATGCGTTGGTAGA+AGG | 0.400517 | 2.3:-39164687 | MS.gene68677:CDS |
| CGACTTCCAGCAAGCTGTAA+TGG | 0.401505 | 2.3:+39162231 | None:intergenic |
| GGAATGCCATTACAGCTTGC+TGG | 0.407333 | 2.3:-39162237 | MS.gene68677:CDS |
| CTTCTTAATCACTAGACAAT+GGG | 0.416346 | 2.3:-39159629 | MS.gene68677:intron |
| TACCTGAGAGCTCCCATTAT+GGG | 0.417411 | 2.3:+39159524 | None:intergenic |
| AGGAACCCAGTATCCCATAA+TGG | 0.429795 | 2.3:-39159537 | MS.gene68677:CDS |
| GCTTTGATTTCTTCTGTCTC+CGG | 0.438837 | 2.3:+39164619 | None:intergenic |
| GGAATGTTATTTAGTCTAGT+AGG | 0.438922 | 2.3:+39163230 | None:intergenic |
| GGTTTGTGTACAGGGGTCAA+TGG | 0.457274 | 2.3:-39162277 | MS.gene68677:CDS |
| TTTCTCTAGACTTTCAGCTT+GGG | 0.458159 | 2.3:+39165387 | None:intergenic |
| GGAACCCAGTATCCCATAAT+GGG | 0.458943 | 2.3:-39159536 | MS.gene68677:CDS |
| TTTCGGCTTCTCTATTATGC+AGG | 0.460503 | 2.3:-39159557 | MS.gene68677:CDS |
| TCCTGAACTGAATCCAGAAA+TGG | 0.460854 | 2.3:-39162573 | MS.gene68677:intron |
| AGAAGGTTAGATCCAGTAAC+TGG | 0.461130 | 2.3:-39164670 | MS.gene68677:CDS |
| GCACTGTCATTTGCCAATGA+TGG | 0.469728 | 2.3:-39162435 | MS.gene68677:CDS |
| TGGGGTGATTATGGTGCAAA+AGG | 0.479166 | 2.3:-39162186 | MS.gene68677:CDS |
| TAGGATAACTGGTCTGTGTT+CGG | 0.482799 | 2.3:+39160138 | None:intergenic |
| AATGAAACCAAGAAAGCCTC+AGG | 0.488516 | 2.3:-39159029 | MS.gene68677:CDS |
| TTATCGAATTGGTACACTGT+TGG | 0.491969 | 2.3:-39162475 | MS.gene68677:CDS |
| AACTGGTCTGTGTTCGGCAG+CGG | 0.493267 | 2.3:+39160144 | None:intergenic |
| GTTTGTGTACAGGGGTCAAT+GGG | 0.495441 | 2.3:-39162276 | MS.gene68677:CDS |
| CTAAGAGCAGAAGTAGCAGC+TGG | 0.501347 | 2.3:-39165665 | MS.gene68677:CDS |
| GTTCATGAATGCTGGTCGCT+TGG | 0.503110 | 2.3:-39165615 | MS.gene68677:CDS |
| ACACAGAGGGCCATCAATGA+TGG | 0.507793 | 2.3:-39163158 | MS.gene68677:CDS |
| GTGGCTCCTCAAAATGCTGT+AGG | 0.509632 | 2.3:-39160360 | MS.gene68677:CDS |
| AGCTCCCATTATGGGATACT+GGG | 0.516652 | 2.3:+39159532 | None:intergenic |
| GCAAAAGAGTTCATGAATGC+TGG | 0.520094 | 2.3:-39165623 | MS.gene68677:CDS |
| ACAGCTGTCACAATTTCATC+AGG | 0.523953 | 2.3:+39165590 | None:intergenic |
| ATCCCATAATGGGAGCTCTC+AGG | 0.524875 | 2.3:-39159526 | MS.gene68677:intron |
| CAAAAGAGTAGAAGAGTCGC+CGG | 0.526347 | 2.3:-39159263 | MS.gene68677:CDS |
| CAATGATGGAAAACGTGTAA+AGG | 0.528261 | 2.3:-39162421 | MS.gene68677:intron |
| TGGTCTGTGTTCGGCAGCGG+TGG | 0.530954 | 2.3:+39160147 | None:intergenic |
| GGGGCATGCATCTTTGATCC+AGG | 0.537524 | 2.3:-39163389 | MS.gene68677:intron |
| TTGTACAGCTCGTAACGGTA+TGG | 0.541143 | 2.3:+39159283 | None:intergenic |
| AAAGGAACCTTCATCAACAT+TGG | 0.543502 | 2.3:-39162168 | MS.gene68677:CDS |
| CACAGTAGGCCTTTCAGGAA+AGG | 0.545074 | 2.3:+39159213 | None:intergenic |
| TTGTGCAGGGGCTCGTTGAG+TGG | 0.548227 | 2.3:-39158900 | MS.gene68677:intron |
| TCATTAATTTCATCCACAGT+AGG | 0.548790 | 2.3:+39159199 | None:intergenic |
| TCTAATACGATATACACATC+AGG | 0.552254 | 2.3:+39165352 | None:intergenic |
| TATGGAACCAATGTTGATGA+AGG | 0.558497 | 2.3:+39162161 | None:intergenic |
| TCCTGCAGGTTTGTGTACAG+GGG | 0.564656 | 2.3:-39162284 | MS.gene68677:intron |
| TTCATCAACATTGGTTCCAT+AGG | 0.570069 | 2.3:-39162159 | MS.gene68677:intron |
| AAAAGAGTAGAAGAGTCGCC+GGG | 0.572875 | 2.3:-39159262 | MS.gene68677:CDS |
| TTCCCCATTCTCGAGAAATG+AGG | 0.574307 | 2.3:-39163211 | MS.gene68677:CDS |
| TTCCTCATTTCTCGAGAATG+GGG | 0.575872 | 2.3:+39163209 | None:intergenic |
| TGCATAATACCACTAGAAGC+AGG | 0.583506 | 2.3:+39159720 | None:intergenic |
| CAGGATTTACCTGCTTCTAG+TGG | 0.583806 | 2.3:-39159729 | MS.gene68677:CDS |
| TGGCTCCTCAAAATGCTGTA+GGG | 0.588324 | 2.3:-39160359 | MS.gene68677:CDS |
| TTGATTTCTTCTGTCTCCGG+CGG | 0.588642 | 2.3:+39164622 | None:intergenic |
| ATTCTGATCGACAGATGCGT+TGG | 0.589630 | 2.3:-39164694 | MS.gene68677:CDS |
| GAGACAAGTCCCTACCTCCA+TGG | 0.591392 | 2.3:+39166622 | None:intergenic |
| AGATGACATGTATTTCTTGG+TGG | 0.597196 | 2.3:-39160379 | MS.gene68677:CDS |
| TCTAATCTCAGGTGCAGCGG+AGG | 0.603873 | 2.3:-39160412 | MS.gene68677:intron |
| ATTTGTAGATGGTGGCAGCA+CGG | 0.610921 | 2.3:-39165471 | MS.gene68677:intron |
| CTTTCCTGAAAGGCCTACTG+TGG | 0.625258 | 2.3:-39159212 | MS.gene68677:CDS |
| GTACAGGGGTCAATGGGAGA+AGG | 0.638754 | 2.3:-39162270 | MS.gene68677:CDS |
| CAGCTCGTAACGGTATGGAT+AGG | 0.640285 | 2.3:+39159288 | None:intergenic |
| GATTAGTGCACATATCAACT+GGG | 0.641321 | 2.3:-39165694 | MS.gene68677:CDS |
| GTGAAAATAGTGAAATCTGG+AGG | 0.645858 | 2.3:-39163788 | MS.gene68677:intron |
| AGACAGAAGAAATCAAAGCA+AGG | 0.664626 | 2.3:-39164615 | MS.gene68677:CDS |
| TTGTTACAGGATAAATGGAG+AGG | 0.665409 | 2.3:-39163257 | MS.gene68677:intron |
| CAGCTTGGGATAAACTACGA+GGG | 0.665535 | 2.3:+39165401 | None:intergenic |
| ATTTCTAATCTCAGGTGCAG+CGG | 0.669501 | 2.3:-39160415 | MS.gene68677:intron |
| ATGAAACCAAGAAAGCCTCA+GGG | 0.692901 | 2.3:-39159028 | MS.gene68677:CDS |
| TTCTTAATCACTAGACAATG+GGG | 0.702647 | 2.3:-39159628 | MS.gene68677:intron |
| TGTTTCTAACCAAAACCCTG+AGG | 0.703551 | 2.3:+39159013 | None:intergenic |
| TGTGCTACTAGCTACACAGA+GGG | 0.720328 | 2.3:-39163171 | MS.gene68677:CDS |
| ATTCCTTTGAAGGAAAACCG+AGG | 0.723762 | 2.3:-39159177 | MS.gene68677:intron |
| ATTAGTGCACATATCAACTG+GGG | 0.754100 | 2.3:-39165693 | MS.gene68677:CDS |
| TCAGCTTGGGATAAACTACG+AGG | 0.765007 | 2.3:+39165400 | None:intergenic |
| ATGTGCTACTAGCTACACAG+AGG | 0.775103 | 2.3:-39163172 | MS.gene68677:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 39158887 | 39166642 | 39158887 | ID=MS.gene68677 |
| chr2.3 | mRNA | 39158887 | 39166642 | 39158887 | ID=MS.gene68677.t1;Parent=MS.gene68677 |
| chr2.3 | exon | 39166637 | 39166642 | 39166637 | ID=MS.gene68677.t1.exon1;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39166637 | 39166642 | 39166637 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39165592 | 39165720 | 39165592 | ID=MS.gene68677.t1.exon2;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39165592 | 39165720 | 39165592 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39165351 | 39165485 | 39165351 | ID=MS.gene68677.t1.exon3;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39165351 | 39165485 | 39165351 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39164582 | 39164728 | 39164582 | ID=MS.gene68677.t1.exon4;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39164582 | 39164728 | 39164582 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39163976 | 39164050 | 39163976 | ID=MS.gene68677.t1.exon5;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39163976 | 39164050 | 39163976 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39163789 | 39163885 | 39163789 | ID=MS.gene68677.t1.exon6;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39163789 | 39163885 | 39163789 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39163390 | 39163436 | 39163390 | ID=MS.gene68677.t1.exon7;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39163390 | 39163436 | 39163390 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39163142 | 39163270 | 39163142 | ID=MS.gene68677.t1.exon8;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39163142 | 39163270 | 39163142 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39162574 | 39162609 | 39162574 | ID=MS.gene68677.t1.exon9;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39162574 | 39162609 | 39162574 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39162422 | 39162502 | 39162422 | ID=MS.gene68677.t1.exon10;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39162422 | 39162502 | 39162422 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39162160 | 39162298 | 39162160 | ID=MS.gene68677.t1.exon11;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39162160 | 39162298 | 39162160 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39160344 | 39160423 | 39160344 | ID=MS.gene68677.t1.exon12;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39160344 | 39160423 | 39160344 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39160120 | 39160185 | 39160120 | ID=MS.gene68677.t1.exon13;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39160120 | 39160185 | 39160120 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39159719 | 39159748 | 39159719 | ID=MS.gene68677.t1.exon14;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39159719 | 39159748 | 39159719 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39159527 | 39159636 | 39159527 | ID=MS.gene68677.t1.exon15;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39159527 | 39159636 | 39159527 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39159178 | 39159315 | 39159178 | ID=MS.gene68677.t1.exon16;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39159178 | 39159315 | 39159178 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39159023 | 39159052 | 39159023 | ID=MS.gene68677.t1.exon17;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39159023 | 39159052 | 39159023 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| chr2.3 | exon | 39158887 | 39158914 | 39158887 | ID=MS.gene68677.t1.exon18;Parent=MS.gene68677.t1 |
| chr2.3 | CDS | 39158887 | 39158914 | 39158887 | ID=cds.MS.gene68677.t1;Parent=MS.gene68677.t1 |
| Gene Sequence |
| Protein sequence |
