Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69910.t1 | PNX74741.1 | 86.8 | 273 | 36 | 0 | 128 | 400 | 2 | 274 | 4.00E-129 | 471.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69910.t1 | Q43317 | 73.3 | 273 | 73 | 0 | 128 | 400 | 52 | 324 | 8.4e-112 | 405.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69910.t1 | A0A2K3L876 | 86.8 | 273 | 36 | 0 | 128 | 400 | 2 | 274 | 2.9e-129 | 471.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene69910 | 0.81027 | 1.25E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene69910 | 0.833054 | 6.65E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene69910 | 0.857945 | 1.16E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene69910 | 0.849772 | 2.61E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene69910 | 0.847991 | 8.15E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene69910 | 0.84785 | 8.90E-60 | -1.69E-46 |
| MS.gene049627 | MS.gene69910 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene69910 | 0.838354 | 3.02E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene69910 | 0.833674 | 4.66E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene69910 | 0.827724 | 1.34E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene69910 | 0.812744 | 3.63E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene69910 | 0.804367 | 2.23E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene69910 | 0.811476 | 6.87E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene69910 | 0.842304 | 2.81E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene69910 | 0.8364 | 9.57E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene69910 | 0.814603 | 1.42E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene69910 | 0.811183 | 7.95E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene69910 | 0.866396 | 2.94E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene69910 | 0.837481 | 5.07E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene69910 | 0.87901 | 1.77E-69 | -1.69E-46 |
| MS.gene050699 | MS.gene69910 | 0.860649 | 1.78E-63 | -1.69E-46 |
| MS.gene050747 | MS.gene69910 | 0.850798 | 1.34E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene69910 | 0.858636 | 7.19E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene69910 | 0.839709 | 1.35E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene69910 | 0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene69910 | 0.836844 | 7.38E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene69910 | 0.859374 | 4.32E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene69910 | 0.846709 | 1.83E-59 | -1.69E-46 |
| MS.gene051167 | MS.gene69910 | -0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene69910 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene69910 | 0.815872 | 7.40E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene69910 | 0.821289 | 4.37E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene69910 | 0.806054 | 9.91E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene69910 | 0.842792 | 2.08E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene69910 | 0.830789 | 2.41E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene69910 | 0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene69910 | 0.84057 | 8.03E-58 | -1.69E-46 |
| MS.gene052379 | MS.gene69910 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene69910 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene69910 | 0.821735 | 3.45E-53 | -1.69E-46 |
| MS.gene052510 | MS.gene69910 | 0.811464 | 6.91E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene69910 | 0.826159 | 3.16E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene69910 | 0.821587 | 3.73E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene69910 | 0.831615 | 1.51E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene69910 | 0.83214 | 1.12E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene69910 | 0.851443 | 8.84E-61 | -1.69E-46 |
| MS.gene053009 | MS.gene69910 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene053107 | MS.gene69910 | 0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene69910 | 0.869019 | 4.24E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene69910 | 0.881199 | 2.93E-70 | -1.69E-46 |
| MS.gene053213 | MS.gene69910 | 0.861508 | 9.77E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene69910 | 0.860419 | 2.09E-63 | -1.69E-46 |
| MS.gene053436 | MS.gene69910 | 0.811199 | 7.89E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene69910 | 0.83047 | 2.88E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene69910 | 0.850588 | 1.54E-60 | -1.69E-46 |
| MS.gene053626 | MS.gene69910 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene69910 | 0.815544 | 8.76E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene69910 | 0.836074 | 1.16E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene69910 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene69910 | 0.850305 | 1.85E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene69910 | 0.849073 | 4.09E-60 | -1.69E-46 |
| MS.gene054927 | MS.gene69910 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene69910 | 0.804472 | 2.13E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene69910 | 0.828205 | 1.02E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene69910 | 0.802389 | 5.74E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene69910 | 0.830999 | 2.14E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene69910 | 0.818379 | 2.02E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene69910 | 0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene69910 | 0.844198 | 8.77E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene69910 | 0.832926 | 7.15E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene69910 | 0.890974 | 6.06E-74 | -1.69E-46 |
| MS.gene055620 | MS.gene69910 | 0.805527 | 1.28E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene69910 | 0.825738 | 3.98E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene69910 | 0.850514 | 1.62E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene69910 | 0.838854 | 2.25E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene69910 | 0.849426 | 3.26E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene69910 | 0.84472 | 6.35E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene69910 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene056409 | MS.gene69910 | 0.802458 | 5.56E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene69910 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene056510 | MS.gene69910 | 0.851903 | 6.55E-61 | -1.69E-46 |
| MS.gene056610 | MS.gene69910 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene69910 | 0.843047 | 1.78E-58 | -1.69E-46 |
| MS.gene05666 | MS.gene69910 | 0.836457 | 9.25E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene69910 | 0.807745 | 4.35E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene69910 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene056947 | MS.gene69910 | 0.830003 | 3.75E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene69910 | 0.831767 | 1.39E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene69910 | 0.880363 | 5.84E-70 | -1.69E-46 |
| MS.gene057332 | MS.gene69910 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene69910 | 0.853589 | 2.16E-61 | -1.69E-46 |
| MS.gene057658 | MS.gene69910 | 0.806116 | 9.62E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene69910 | 0.823572 | 1.29E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene69910 | 0.809418 | 1.91E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene69910 | 0.818694 | 1.72E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene69910 | 0.821595 | 3.71E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene69910 | 0.852966 | 3.26E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene69910 | 0.859047 | 5.42E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene69910 | 0.829087 | 6.26E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene69910 | 0.828352 | 9.43E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene69910 | 0.83538 | 1.74E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene69910 | 0.87054 | 1.35E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene69910 | 0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene69910 | 0.831995 | 1.22E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene69910 | 0.830006 | 3.74E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene69910 | 0.84583 | 3.18E-59 | -1.69E-46 |
| MS.gene059029 | MS.gene69910 | 0.81445 | 1.53E-51 | -1.69E-46 |
| MS.gene059181 | MS.gene69910 | 0.827753 | 1.31E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene69910 | 0.825996 | 3.46E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene69910 | 0.840213 | 9.96E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene69910 | 0.870927 | 1.01E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene69910 | 0.823316 | 1.48E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene69910 | 0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene69910 | 0.822389 | 2.43E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene69910 | 0.840432 | 8.73E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene69910 | 0.810105 | 1.36E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene69910 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene69910 | 0.837631 | 4.64E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene69910 | 0.821014 | 5.06E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene69910 | 0.819129 | 1.37E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene69910 | 0.82863 | 8.08E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene69910 | 0.826874 | 2.14E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene69910 | 0.854192 | 1.45E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene69910 | 0.827218 | 1.77E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene69910 | 0.842981 | 1.85E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene69910 | 0.801202 | 1.01E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69910.t1 | MTR_1g081620 | 86.081 | 273 | 38 | 0 | 128 | 400 | 51 | 323 | 3.63e-161 | 456 |
| MS.gene69910.t1 | MTR_1g081625 | 85.714 | 273 | 39 | 0 | 128 | 400 | 51 | 323 | 3.43e-153 | 436 |
| MS.gene69910.t1 | MTR_1g081640 | 93.671 | 237 | 15 | 0 | 128 | 364 | 51 | 287 | 7.50e-140 | 401 |
| MS.gene69910.t1 | MTR_1g081610 | 73.260 | 273 | 73 | 0 | 128 | 400 | 52 | 324 | 1.56e-125 | 365 |
| MS.gene69910.t1 | MTR_5g006340 | 70.979 | 286 | 83 | 0 | 115 | 400 | 39 | 324 | 1.54e-124 | 363 |
| MS.gene69910.t1 | MTR_4g087490 | 58.442 | 308 | 120 | 2 | 98 | 397 | 53 | 360 | 1.53e-123 | 362 |
| MS.gene69910.t1 | MTR_1g103690 | 69.231 | 286 | 88 | 0 | 115 | 400 | 39 | 324 | 3.36e-123 | 359 |
| MS.gene69910.t1 | MTR_4g087510 | 57.597 | 283 | 112 | 1 | 115 | 397 | 77 | 351 | 8.92e-115 | 339 |
| MS.gene69910.t1 | MTR_7g078070 | 59.480 | 269 | 109 | 0 | 129 | 397 | 13 | 281 | 4.69e-111 | 327 |
| MS.gene69910.t1 | MTR_7g078070 | 59.480 | 269 | 109 | 0 | 129 | 397 | 46 | 314 | 1.15e-110 | 327 |
| MS.gene69910.t1 | MTR_7g078070 | 59.480 | 269 | 109 | 0 | 129 | 397 | 106 | 374 | 1.45e-110 | 329 |
| MS.gene69910.t1 | MTR_4g087520 | 66.165 | 266 | 90 | 0 | 132 | 397 | 1 | 266 | 3.03e-109 | 322 |
| MS.gene69910.t1 | MTR_7g087110 | 58.148 | 270 | 103 | 1 | 128 | 397 | 109 | 368 | 2.87e-91 | 280 |
| MS.gene69910.t1 | MTR_2g090520 | 87.692 | 65 | 8 | 0 | 17 | 81 | 96 | 160 | 4.28e-31 | 119 |
| MS.gene69910.t1 | MTR_2g090520 | 87.692 | 65 | 8 | 0 | 17 | 81 | 239 | 303 | 1.04e-30 | 120 |
| MS.gene69910.t1 | MTR_2g090520 | 87.692 | 65 | 8 | 0 | 17 | 81 | 239 | 303 | 4.25e-30 | 120 |
| MS.gene69910.t1 | MTR_5g095670 | 28.754 | 313 | 164 | 6 | 128 | 383 | 88 | 398 | 2.72e-29 | 118 |
| MS.gene69910.t1 | MTR_2g090525 | 78.462 | 65 | 14 | 0 | 17 | 81 | 77 | 141 | 9.07e-27 | 107 |
| MS.gene69910.t1 | MTR_2g090525 | 78.462 | 65 | 14 | 0 | 17 | 81 | 76 | 140 | 9.23e-27 | 107 |
| MS.gene69910.t1 | MTR_2g090525 | 80.000 | 65 | 13 | 0 | 17 | 81 | 257 | 321 | 3.15e-26 | 108 |
| MS.gene69910.t1 | MTR_2g090525 | 78.462 | 65 | 14 | 0 | 17 | 81 | 150 | 214 | 3.67e-26 | 107 |
| MS.gene69910.t1 | MTR_2g090525 | 78.462 | 65 | 14 | 0 | 17 | 81 | 257 | 321 | 6.33e-26 | 107 |
| MS.gene69910.t1 | MTR_2g461250 | 87.500 | 48 | 6 | 0 | 80 | 127 | 74 | 121 | 1.25e-21 | 89.7 |
| MS.gene69910.t1 | MTR_0370s0010 | 57.353 | 68 | 24 | 3 | 17 | 82 | 212 | 276 | 1.98e-12 | 67.4 |
| MS.gene69910.t1 | MTR_0370s0010 | 58.462 | 65 | 22 | 3 | 17 | 79 | 212 | 273 | 1.42e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69910.t1 | AT3G04940 | 70.741 | 270 | 79 | 0 | 128 | 397 | 52 | 321 | 1.38e-125 | 365 |
| MS.gene69910.t1 | AT3G04940 | 70.741 | 270 | 79 | 0 | 128 | 397 | 52 | 321 | 1.38e-125 | 365 |
| MS.gene69910.t1 | AT2G43750 | 69.611 | 283 | 86 | 0 | 115 | 397 | 106 | 388 | 1.44e-122 | 360 |
| MS.gene69910.t1 | AT2G43750 | 69.611 | 283 | 86 | 0 | 115 | 397 | 106 | 388 | 1.44e-122 | 360 |
| MS.gene69910.t1 | AT4G14880 | 68.864 | 273 | 85 | 0 | 128 | 400 | 49 | 321 | 2.09e-121 | 355 |
| MS.gene69910.t1 | AT4G14880 | 68.864 | 273 | 85 | 0 | 128 | 400 | 49 | 321 | 2.09e-121 | 355 |
| MS.gene69910.t1 | AT4G14880 | 68.864 | 273 | 85 | 0 | 128 | 400 | 49 | 321 | 2.09e-121 | 355 |
| MS.gene69910.t1 | AT4G14880 | 68.864 | 273 | 85 | 0 | 128 | 400 | 49 | 321 | 2.09e-121 | 355 |
| MS.gene69910.t1 | AT4G14880 | 68.864 | 273 | 85 | 0 | 128 | 400 | 49 | 321 | 2.09e-121 | 355 |
| MS.gene69910.t1 | AT3G59760 | 66.078 | 283 | 96 | 0 | 115 | 397 | 144 | 426 | 1.89e-118 | 351 |
| MS.gene69910.t1 | AT3G59760 | 66.078 | 283 | 96 | 0 | 115 | 397 | 144 | 426 | 2.13e-118 | 351 |
| MS.gene69910.t1 | AT3G22460 | 64.684 | 269 | 75 | 1 | 132 | 400 | 1 | 249 | 1.32e-116 | 340 |
| MS.gene69910.t1 | AT5G28030 | 68.864 | 273 | 85 | 0 | 128 | 400 | 51 | 323 | 3.66e-115 | 339 |
| MS.gene69910.t1 | AT5G28030 | 68.864 | 273 | 85 | 0 | 128 | 400 | 51 | 323 | 3.66e-115 | 339 |
| MS.gene69910.t1 | AT5G28030 | 68.864 | 273 | 85 | 0 | 128 | 400 | 51 | 323 | 3.66e-115 | 339 |
| MS.gene69910.t1 | AT5G28030 | 68.864 | 273 | 85 | 0 | 128 | 400 | 51 | 323 | 3.66e-115 | 339 |
| MS.gene69910.t1 | AT5G28020 | 67.766 | 273 | 88 | 0 | 128 | 400 | 51 | 323 | 5.68e-114 | 336 |
| MS.gene69910.t1 | AT5G28020 | 67.766 | 273 | 88 | 0 | 128 | 400 | 51 | 323 | 5.68e-114 | 336 |
| MS.gene69910.t1 | AT5G28020 | 67.766 | 273 | 88 | 0 | 128 | 400 | 51 | 323 | 5.68e-114 | 336 |
| MS.gene69910.t1 | AT5G28020 | 67.766 | 273 | 88 | 0 | 128 | 400 | 51 | 323 | 5.68e-114 | 336 |
| MS.gene69910.t1 | AT5G28020 | 67.766 | 273 | 88 | 0 | 128 | 400 | 51 | 323 | 5.68e-114 | 336 |
| MS.gene69910.t1 | AT3G61440 | 57.993 | 269 | 113 | 0 | 129 | 397 | 94 | 362 | 2.95e-105 | 315 |
| MS.gene69910.t1 | AT3G61440 | 58.271 | 266 | 111 | 0 | 132 | 397 | 1 | 266 | 7.83e-105 | 311 |
| MS.gene69910.t1 | AT3G59760 | 64.729 | 258 | 91 | 0 | 115 | 372 | 144 | 401 | 3.47e-101 | 307 |
| MS.gene69910.t1 | AT5G28020 | 67.089 | 237 | 78 | 0 | 164 | 400 | 1 | 237 | 6.72e-95 | 284 |
| MS.gene69910.t1 | AT3G61440 | 57.917 | 240 | 101 | 0 | 158 | 397 | 2 | 241 | 1.08e-93 | 281 |
| MS.gene69910.t1 | AT3G03630 | 58.456 | 272 | 103 | 1 | 128 | 399 | 143 | 404 | 1.73e-93 | 286 |
| MS.gene69910.t1 | AT5G28030 | 68.500 | 200 | 63 | 0 | 128 | 327 | 51 | 250 | 4.07e-84 | 258 |
| MS.gene69910.t1 | AT3G61440 | 55.251 | 219 | 98 | 0 | 129 | 347 | 94 | 312 | 1.81e-80 | 251 |
| MS.gene69910.t1 | AT3G22460 | 66.423 | 137 | 46 | 0 | 128 | 264 | 52 | 188 | 2.76e-61 | 196 |
| MS.gene69910.t1 | AT1G55880 | 28.025 | 314 | 166 | 7 | 128 | 383 | 84 | 395 | 2.72e-27 | 112 |
| MS.gene69910.t1 | AT1G55880 | 31.401 | 207 | 100 | 5 | 128 | 293 | 84 | 289 | 1.66e-21 | 95.1 |
Find 88 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGTCTTCTTTCAAATTTA+TGG | 0.160419 | 1.4:-66123922 | None:intergenic |
| GACAGAGAATCATAAGAAAA+AGG | 0.233023 | 1.4:+66120650 | MS.gene69910:CDS |
| TGCTTTGAAAGAAGGTTTAC+TGG | 0.278057 | 1.4:+66128754 | MS.gene69910:CDS |
| AATCAGTAATATACCTTTGC+AGG | 0.289736 | 1.4:-66127112 | None:intergenic |
| TAGCAAGTTCTTCAAGCCTT+TGG | 0.295788 | 1.4:-66122317 | None:intergenic |
| TTGGTTGCAGGGATAGGAAC+TGG | 0.301174 | 1.4:+66127814 | MS.gene69910:CDS |
| AGACCACTGGCCCTGAGATT+TGG | 0.302016 | 1.4:+66127764 | MS.gene69910:CDS |
| TCTCCTAGATGAAATTATTC+AGG | 0.319282 | 1.4:+66128276 | MS.gene69910:CDS |
| AGAATTGATGCTTTGGTTGC+AGG | 0.319930 | 1.4:+66127802 | MS.gene69910:CDS |
| GAGGAAGAAACAAGAAGAAT+TGG | 0.332205 | 1.4:+66118863 | MS.gene69910:CDS |
| TGATTGAGCATATAACTATT+AGG | 0.333253 | 1.4:-66127623 | None:intergenic |
| AAAATTATACCGCGAGCTTT+CGG | 0.347588 | 1.4:+66127521 | MS.gene69910:CDS |
| AAAGAACTAGAAGACATAAA+TGG | 0.349189 | 1.4:+66120600 | MS.gene69910:CDS |
| AGCAAGTTCTTCAAGCCTTT+GGG | 0.357377 | 1.4:-66122316 | None:intergenic |
| CCAGTGTCTCTCCAAATCTC+AGG | 0.381632 | 1.4:-66127775 | None:intergenic |
| CACACCATGTCTTACTTTGG+TGG | 0.393906 | 1.4:-66120577 | None:intergenic |
| CTCTCAAGACTCACAAAAGA+TGG | 0.404289 | 1.4:-66127497 | None:intergenic |
| ATTGAAGATGCCGAAAATAA+AGG | 0.410624 | 1.4:+66127079 | MS.gene69910:CDS |
| TTGCAGATGGGAATTTCATC+AGG | 0.417954 | 1.4:+66129056 | MS.gene69910:intron |
| TTCTTCAGCTTCACGCCTGA+TGG | 0.420313 | 1.4:-66129352 | None:intergenic |
| TGGAGGGAGAATTGATGCTT+TGG | 0.420775 | 1.4:+66127795 | MS.gene69910:CDS |
| GAAAATACCTTTGGATTGAC+AGG | 0.427407 | 1.4:-66127656 | None:intergenic |
| GACCCTGCCAAAGGAGTTGA+TGG | 0.430929 | 1.4:+66127563 | MS.gene69910:CDS |
| AAGCTGCTTGCTTTGAAAGA+AGG | 0.434359 | 1.4:+66128746 | MS.gene69910:CDS |
| GACTGTTCTTGTTGAGGCTA+CGG | 0.435622 | 1.4:+66127406 | MS.gene69910:intron |
| TTTCACACCATGTCTTACTT+TGG | 0.439427 | 1.4:-66120580 | None:intergenic |
| ACCGTCAATACCTAAGGCTT+TGG | 0.443243 | 1.4:+66122371 | MS.gene69910:CDS |
| TTAGGTATTGACGGTGTCAC+TGG | 0.459042 | 1.4:-66122363 | None:intergenic |
| GAATTGATGCTTTGGTTGCA+GGG | 0.460383 | 1.4:+66127803 | MS.gene69910:CDS |
| AGTTTACTCACCAAAGCCTT+AGG | 0.461179 | 1.4:-66122381 | None:intergenic |
| CATCTAGGAGATCAAGATCC+AGG | 0.474241 | 1.4:-66128264 | None:intergenic |
| TTCAAAATTGCACTTTCAGT+TGG | 0.477799 | 1.4:-66128024 | None:intergenic |
| ACTCCATCAACTCCTTTGGC+AGG | 0.479455 | 1.4:-66127566 | None:intergenic |
| GGAGAGAAACTTAGATATCA+AGG | 0.483692 | 1.4:+66127870 | MS.gene69910:CDS |
| CGACACCATTACCGATACCT+TGG | 0.483706 | 1.4:-66128231 | None:intergenic |
| TGGTTGCAGGGATAGGAACT+GGG | 0.484341 | 1.4:+66127815 | MS.gene69910:CDS |
| ACTGTTCTTGTTGAGGCTAC+GGG | 0.484824 | 1.4:+66127407 | MS.gene69910:CDS |
| GAAGAAACAAGAAGAATTGG+AGG | 0.484939 | 1.4:+66118866 | MS.gene69910:CDS |
| CTACCTGAATAATTTCATCT+AGG | 0.485862 | 1.4:-66128279 | None:intergenic |
| GGGGCTGGGTTTGCAATTGG+AGG | 0.496777 | 1.4:+66118844 | MS.gene69910:CDS |
| CTAATCCAAGGTATCGGTAA+TGG | 0.499930 | 1.4:+66128226 | MS.gene69910:CDS |
| GATGCTTTGGTTGCAGGGAT+AGG | 0.501960 | 1.4:+66127808 | MS.gene69910:CDS |
| AATTTCCCGCCCTAGGTGTA+TGG | 0.501992 | 1.4:+66127994 | MS.gene69910:intron |
| GCAGCAGCTGCAATAAAACT+AGG | 0.508019 | 1.4:+66129086 | MS.gene69910:CDS |
| TGGCAACACCGGCATAGGAT+TGG | 0.508149 | 1.4:+66127430 | MS.gene69910:CDS |
| AAGTAACGCTCTCCAAAACT+AGG | 0.515786 | 1.4:-66129309 | None:intergenic |
| GAGGCTACGGGTGGCAACAC+CGG | 0.516683 | 1.4:+66127419 | MS.gene69910:CDS |
| TATAAAGACTGTTCTTGTTG+AGG | 0.526664 | 1.4:+66127400 | MS.gene69910:intron |
| ACCAAAGCCTTAGGTATTGA+CGG | 0.527928 | 1.4:-66122372 | None:intergenic |
| TAGACTCATTATGAGACCAC+TGG | 0.531764 | 1.4:+66127751 | MS.gene69910:intron |
| ACGGGTGGCAACACCGGCAT+AGG | 0.532817 | 1.4:+66127425 | MS.gene69910:CDS |
| ACTACGTCTTGGTGGTCCAT+TGG | 0.537769 | 1.4:+66123940 | MS.gene69910:CDS |
| TGAAAACAGAAGAGAATGGA+TGG | 0.542892 | 1.4:+66120548 | MS.gene69910:CDS |
| GAAAGAAGACTACGTCTTGG+TGG | 0.549879 | 1.4:+66123932 | MS.gene69910:CDS |
| AGGAGATCAAGATCCAGGAC+AGG | 0.551186 | 1.4:-66128259 | None:intergenic |
| TCTCCAAATCTCAGGGCCAG+TGG | 0.561794 | 1.4:-66127767 | None:intergenic |
| TTTGAAAGAAGACTACGTCT+TGG | 0.564823 | 1.4:+66123929 | MS.gene69910:CDS |
| GGGAAGAGACAAGAAAATGC+AGG | 0.574537 | 1.4:+66129107 | MS.gene69910:CDS |
| CAGCAGCTGCAATAAAACTA+GGG | 0.584186 | 1.4:+66129087 | MS.gene69910:CDS |
| TATCTAAGTTTCTCTCCTTG+AGG | 0.585770 | 1.4:-66127864 | None:intergenic |
| AGTGACACCGTCAATACCTA+AGG | 0.590553 | 1.4:+66122365 | MS.gene69910:CDS |
| CAGTGTCTCTCCAAATCTCA+GGG | 0.596061 | 1.4:-66127774 | None:intergenic |
| CCTGAGATTTGGAGAGACAC+TGG | 0.596193 | 1.4:+66127775 | MS.gene69910:CDS |
| CTCCATCAACTCCTTTGGCA+GGG | 0.596937 | 1.4:-66127565 | None:intergenic |
| AAAGGCGAACATCTAATCCA+AGG | 0.601059 | 1.4:+66128214 | MS.gene69910:intron |
| GAACATCTAATCCAAGGTAT+CGG | 0.603211 | 1.4:+66128220 | MS.gene69910:CDS |
| AGGTCTCATTACTCCTGCAA+AGG | 0.603893 | 1.4:+66127099 | MS.gene69910:CDS |
| CTATTAAGCAGTCAAGACAA+TGG | 0.604644 | 1.4:+66122337 | MS.gene69910:CDS |
| AAAAGGGTGAAGCATATCAA+AGG | 0.605182 | 1.4:+66120667 | MS.gene69910:CDS |
| TGAAAATCCTGTCAATCCAA+AGG | 0.608161 | 1.4:+66127649 | MS.gene69910:CDS |
| GATCGATGCCAATCCTATGC+CGG | 0.608438 | 1.4:-66127438 | None:intergenic |
| ACCGCGAGCTTTCGGAGCCG+AGG | 0.609695 | 1.4:+66127529 | MS.gene69910:CDS |
| AGGTTTCGGTCAAAACCCAA+AGG | 0.617561 | 1.4:+66122301 | MS.gene69910:intron |
| GGGGAACAATAACAGGTGCT+GGG | 0.617812 | 1.4:+66127836 | MS.gene69910:CDS |
| GGAGATCAAGATCCAGGACA+GGG | 0.624998 | 1.4:-66128258 | None:intergenic |
| ACCTCGGCTCCGAAAGCTCG+CGG | 0.637489 | 1.4:-66127530 | None:intergenic |
| AGGGTCTGTCAGATATACCT+CGG | 0.637839 | 1.4:-66127546 | None:intergenic |
| GTTCTTGTTGAGGCTACGGG+TGG | 0.643495 | 1.4:+66127410 | MS.gene69910:CDS |
| AGATTTGGAGAGACACTGGA+GGG | 0.656101 | 1.4:+66127779 | MS.gene69910:CDS |
| AGATCAAGATCCAGGACAGG+GGG | 0.659611 | 1.4:-66128256 | None:intergenic |
| TATCTGACAGACCCTGCCAA+AGG | 0.659992 | 1.4:+66127554 | MS.gene69910:CDS |
| GAGATTTGGAGAGACACTGG+AGG | 0.660104 | 1.4:+66127778 | MS.gene69910:CDS |
| AGGTGCTGGGAAGTTCCTCA+AGG | 0.662577 | 1.4:+66127849 | MS.gene69910:CDS |
| GGTTGCAGGGATAGGAACTG+GGG | 0.673121 | 1.4:+66127816 | MS.gene69910:CDS |
| GCATCGATCGCAGCACTGAG+AGG | 0.674732 | 1.4:+66127452 | MS.gene69910:CDS |
| GAGATCAAGATCCAGGACAG+GGG | 0.676210 | 1.4:-66128257 | None:intergenic |
| TGTGCCACCAAAGTAAGACA+TGG | 0.701959 | 1.4:+66120573 | MS.gene69910:CDS |
| GTTGCAGGGATAGGAACTGG+GGG | 0.729118 | 1.4:+66127817 | MS.gene69910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 66118841 | 66129389 | 66118841 | ID=MS.gene69910 |
| chr1.4 | mRNA | 66118841 | 66129389 | 66118841 | ID=MS.gene69910.t1;Parent=MS.gene69910 |
| chr1.4 | exon | 66118841 | 66118887 | 66118841 | ID=MS.gene69910.t1.exon1;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66118841 | 66118887 | 66118841 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66120530 | 66120722 | 66120530 | ID=MS.gene69910.t1.exon2;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66120530 | 66120722 | 66120530 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66122303 | 66122392 | 66122303 | ID=MS.gene69910.t1.exon3;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66122303 | 66122392 | 66122303 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66123912 | 66123961 | 66123912 | ID=MS.gene69910.t1.exon4;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66123912 | 66123961 | 66123912 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66127063 | 66127120 | 66127063 | ID=MS.gene69910.t1.exon5;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66127063 | 66127120 | 66127063 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66127407 | 66127670 | 66127407 | ID=MS.gene69910.t1.exon6;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66127407 | 66127670 | 66127407 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66127754 | 66127891 | 66127754 | ID=MS.gene69910.t1.exon7;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66127754 | 66127891 | 66127754 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66128009 | 66128060 | 66128009 | ID=MS.gene69910.t1.exon8;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66128009 | 66128060 | 66128009 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66128218 | 66128297 | 66128218 | ID=MS.gene69910.t1.exon9;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66128218 | 66128297 | 66128218 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66128716 | 66128775 | 66128716 | ID=MS.gene69910.t1.exon10;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66128716 | 66128775 | 66128716 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66129062 | 66129142 | 66129062 | ID=MS.gene69910.t1.exon11;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66129062 | 66129142 | 66129062 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| chr1.4 | exon | 66129300 | 66129389 | 66129300 | ID=MS.gene69910.t1.exon12;Parent=MS.gene69910.t1 |
| chr1.4 | CDS | 66129300 | 66129389 | 66129300 | ID=cds.MS.gene69910.t1;Parent=MS.gene69910.t1 |
| Gene Sequence |
| Protein sequence |
