AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68856


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68856.t1 MTR_4g132500 100.000 327 0 0 60 386 644 970 0.0 681
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68856.t1 AT4G04350 78.086 324 71 0 60 383 647 970 0.0 549

Find 0 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATTATGTAGTTATA+AGG + 32681:15643-15662 None:intergenic 10.0%
!! CATAAAGAAATAAATTAAAA+AGG + 32681:14917-14936 None:intergenic 10.0%
!! TAAAGAAATAAATTAAAAAG+GGG + 32681:14915-14934 None:intergenic 10.0%
!!! AATATTTTGAAATCTTTAAA+GGG - 32681:16954-16973 MS.gene68856:intron 10.0%
!!! CTTTTTAATTTATTTCTTTA+TGG - 32681:14915-14934 MS.gene68856:intron 10.0%
!!! TTCTTATAATTTTATGATAA+AGG - 32681:16715-16734 MS.gene68856:intron 10.0%
!! TGTGTAACATAATAAAATAT+TGG + 32681:16408-16427 None:intergenic 15.0%
!!! AAAAATAGAAAATTTGCTTT+TGG + 32681:15548-15567 None:intergenic 15.0%
!!! AGTGTATTAAGTTTTTATAT+TGG + 32681:14054-14073 None:intergenic 15.0%
!!! ATAAATTCACAATTTTCTAA+TGG - 32681:14404-14423 MS.gene68856:intron 15.0%
!!! ATATTTTGAAATCTTTAAAG+GGG - 32681:16955-16974 MS.gene68856:intron 15.0%
!!! CAATATTTTGAAATCTTTAA+AGG - 32681:16953-16972 MS.gene68856:intron 15.0%
!!! GTGTATTAAGTTTTTATATT+GGG + 32681:14053-14072 None:intergenic 15.0%
!!! TGTATTAAGTTTTTATATTG+GGG + 32681:14052-14071 None:intergenic 15.0%
!!! TTTAATTTATTTCTTTATGG+TGG - 32681:14918-14937 MS.gene68856:intron 15.0%
!!! TTTTTTATCTTATTCATGTT+TGG - 32681:15722-15741 MS.gene68856:CDS 15.0%
!! ACATTTAAATACTTATACTG+TGG - 32681:16890-16909 MS.gene68856:intron 20.0%
!! ATCTCTAAATCTTTCTTAAT+AGG + 32681:16189-16208 None:intergenic 20.0%
!! ATGTTCATTTAACATATTAG+TGG + 32681:14494-14513 None:intergenic 20.0%
!! TCTCTAAATCTTTCTTAATA+GGG + 32681:16188-16207 None:intergenic 20.0%
!! TGATTTATGATAGAACATTA+TGG - 32681:16287-16306 MS.gene68856:CDS 20.0%
!! TTGGTACTAAAGAAAATTAT+TGG - 32681:13927-13946 MS.gene68856:intron 20.0%
!!! AAATATTGGTTAGACATTAT+TGG + 32681:16394-16413 None:intergenic 20.0%
!!! ATATGTAAAAGCTATACTTT+TGG + 32681:16481-16500 None:intergenic 20.0%
!!! CTTTTACATATTTATCACAA+AGG - 32681:16490-16509 MS.gene68856:CDS 20.0%
!!! GTTATTATTTAACTTCTAGA+AGG + 32681:14098-14117 None:intergenic 20.0%
!!! TATGATCTCTATATTTTTCT+TGG - 32681:15916-15935 MS.gene68856:intron 20.0%
!!! TATTTTGAAATCTTTAAAGG+GGG - 32681:16956-16975 MS.gene68856:intron 20.0%
!!! TCATAATGTTGTTTTGATTA+AGG + 32681:14882-14901 None:intergenic 20.0%
!!! TCATTTTCATAGTATCATTT+GGG + 32681:16792-16811 None:intergenic 20.0%
!!! TTCATTTTCATAGTATCATT+TGG + 32681:16793-16812 None:intergenic 20.0%
! AAAAAAACACCAACACAAAT+AGG + 32681:16746-16765 None:intergenic 25.0%
! AAAGGTTCAAAATCTTAACT+CGG + 32681:14588-14607 None:intergenic 25.0%
! AAATGTTTGTAAAAGACTTC+TGG + 32681:16876-16895 None:intergenic 25.0%
! AACTCATTTAAATCCCTAAT+TGG + 32681:14171-14190 None:intergenic 25.0%
! AATATATGCCACAAGTAATA+GGG + 32681:14847-14866 None:intergenic 25.0%
! AATCAAAGAGAAAATTGATG+TGG + 32681:14998-15017 None:intergenic 25.0%
! ACTTAACAAATCATACCATT+AGG + 32681:16620-16639 None:intergenic 25.0%
! AGAATTTACTTTCAGTATTC+AGG - 32681:15302-15321 MS.gene68856:intron 25.0%
! AGTGTAACAAGAATTTCTAT+TGG - 32681:13680-13699 MS.gene68856:CDS 25.0%
! ATCAAAGAGAAAATTGATGT+GGG + 32681:14997-15016 None:intergenic 25.0%
! ATTGAAATTTAAACACAACC+TGG + 32681:16990-17009 None:intergenic 25.0%
! ATTGATAAATCCACCAATTA+GGG - 32681:14155-14174 MS.gene68856:intron 25.0%
! CATCATATGTATATCCTATA+TGG - 32681:15780-15799 MS.gene68856:intron 25.0%
! CGTTTATATGAAATGTTCAT+GGG - 32681:14795-14814 MS.gene68856:CDS 25.0%
! GGATTTAAATGAGTTCAATA+AGG - 32681:14176-14195 MS.gene68856:intron 25.0%
! TAATCTAGAAAGAATTTCTG+AGG - 32681:14513-14532 MS.gene68856:intron 25.0%
! TCGTTTATATGAAATGTTCA+TGG - 32681:14794-14813 MS.gene68856:CDS 25.0%
! TCTTGTCAAGGAAAAAAAAA+AGG + 32681:14606-14625 None:intergenic 25.0%
! TGAAAAGCTATCCAAATATT+TGG - 32681:17204-17223 MS.gene68856:CDS 25.0%
! TGATGTACATTATACCATAT+AGG + 32681:15797-15816 None:intergenic 25.0%
! TTAAATAATAACTGCCAACT+TGG - 32681:14106-14125 MS.gene68856:intron 25.0%
! TTTAATGGAAATTCTTCGAT+TGG - 32681:13908-13927 MS.gene68856:intron 25.0%
! TTTATGAAGTGTATTGTGTT+TGG - 32681:15821-15840 MS.gene68856:intron 25.0%
!! TATGTAATATCTGTCTGTTT+TGG + 32681:15502-15521 None:intergenic 25.0%
!! TATTGGTAATATGCTATGTT+TGG - 32681:13697-13716 MS.gene68856:CDS 25.0%
!! TTATCACCTATGCAATTTTT+CGG + 32681:15607-15626 None:intergenic 25.0%
!! TTATTTCTTTATGGTGGTAT+GGG - 32681:14924-14943 MS.gene68856:intron 25.0%
!! TTTATTTCTTTATGGTGGTA+TGG - 32681:14923-14942 MS.gene68856:intron 25.0%
!! TTTTCCTAAGGTATGAATTT+GGG - 32681:16074-16093 MS.gene68856:CDS 25.0%
!!! ATTGATTTGTCTATGGAATA+GGG - 32681:15458-15477 MS.gene68856:CDS 25.0%
!!! GAACAATATTGATTTGTCTA+TGG - 32681:15451-15470 MS.gene68856:CDS 25.0%
!!! TATTGATTTGTCTATGGAAT+AGG - 32681:15457-15476 MS.gene68856:CDS 25.0%
!!! TTGTGTTGGTGTTTTTTTTT+TGG - 32681:16748-16767 MS.gene68856:intron 25.0%
!!! TTTAGCTTTAATTGCAGTTT+CGG - 32681:15666-15685 MS.gene68856:CDS 25.0%
!!! TTTTCTTGTGTCTTTGTTTA+TGG - 32681:15247-15266 MS.gene68856:intron 25.0%
!!! TTTTTAGTTTTCCAACTTCT+AGG - 32681:13825-13844 MS.gene68856:intron 25.0%
AAACCATTCCTATTCATTCA+TGG - 32681:16105-16124 MS.gene68856:CDS 30.0%
AACAACATTCAAAATCTTGC+CGG + 32681:17263-17282 None:intergenic 30.0%
AAGAAGGAAATGCTTATCAA+GGG - 32681:13769-13788 MS.gene68856:intron 30.0%
AAGCTATCCAAATATTTGGA+TGG - 32681:17208-17227 MS.gene68856:CDS 30.0%
ACTATCACGAACTACTTTAA+TGG - 32681:13893-13912 MS.gene68856:intron 30.0%
AGATTGACCATCCAAATATT+TGG + 32681:17218-17237 None:intergenic 30.0%
ATACCTTATATGCTGCATTA+AGG + 32681:15386-15405 None:intergenic 30.0%
ATGGATTTAACAAGCTGATT+TGG - 32681:15266-15285 MS.gene68856:intron 30.0%
ATTACTTGTGGCATATATTG+TGG - 32681:14848-14867 MS.gene68856:CDS 30.0%
CAAATTCATACCTTAGGAAA+AGG + 32681:16075-16094 None:intergenic 30.0%
CAATATATGCCACAAGTAAT+AGG + 32681:14848-14867 None:intergenic 30.0%
CATAAAATGAGTAAAAGCAG+GGG - 32681:14720-14739 MS.gene68856:intron 30.0%
CCATAAAATGAGTAAAAGCA+GGG - 32681:14719-14738 MS.gene68856:intron 30.0%
CCTTATCTTTAATCTAAGTG+GGG + 32681:13964-13983 None:intergenic 30.0%
CTAAATCCGAAAAATTGCAT+AGG - 32681:15598-15617 MS.gene68856:intron 30.0%
CTATTACCAATTGTTAGTGT+TGG - 32681:14209-14228 MS.gene68856:intron 30.0%
GAAATTCTTGTTACACTTCT+AGG + 32681:13677-13696 None:intergenic 30.0%
GATTAATGAGTTAGATCGAA+TGG - 32681:16206-16225 MS.gene68856:intron 30.0%
GATTGATAAATCCACCAATT+AGG - 32681:14154-14173 MS.gene68856:intron 30.0%
GCCTTATCTTTAATCTAAGT+GGG + 32681:13965-13984 None:intergenic 30.0%
GGTAATATAAGTTCTTGTCA+AGG + 32681:14618-14637 None:intergenic 30.0%
TAAGAAGGAAATGCTTATCA+AGG - 32681:13768-13787 MS.gene68856:intron 30.0%
TATTTCTTTATGGTGGTATG+GGG - 32681:14925-14944 MS.gene68856:intron 30.0%
TCAAAGAGAAAATTGATGTG+GGG + 32681:14996-15015 None:intergenic 30.0%
TCATTTAAATCCCTAATTGG+TGG + 32681:14168-14187 None:intergenic 30.0%
TCCATAAGTGAGTGAAAATA+GGG + 32681:15694-15713 None:intergenic 30.0%
TGAATAGGAATGGTTTGATA+TGG + 32681:16101-16120 None:intergenic 30.0%
TGAATTGCAGGTTCAATATA+TGG - 32681:14429-14448 MS.gene68856:intron 30.0%
TTCCATAAGTGAGTGAAAAT+AGG + 32681:15695-15714 None:intergenic 30.0%
TTCTTCTGCTTGAAATTTGA+GGG - 32681:14360-14379 MS.gene68856:intron 30.0%
TTTCTAATGGTTTGAATTGC+AGG - 32681:14417-14436 MS.gene68856:intron 30.0%
TTTCTTCTGCTTGAAATTTG+AGG - 32681:14359-14378 MS.gene68856:intron 30.0%
! AATTACTGATTGCGTCAAAT+AGG - 32681:16438-16457 MS.gene68856:intron 30.0%
! AGAAAGAATTTCTGAGGAAA+AGG - 32681:14519-14538 MS.gene68856:intron 30.0%
! AGCCTTATCTTTAATCTAAG+TGG + 32681:13966-13985 None:intergenic 30.0%
! CAACACTAACAATTGGTAAT+AGG + 32681:14211-14230 None:intergenic 30.0%
! CAAGATTTTGAATGTTGTTC+TGG - 32681:17264-17283 MS.gene68856:CDS 30.0%
! CTTTTCCTAAGGTATGAATT+TGG - 32681:16073-16092 MS.gene68856:CDS 30.0%
! TATTGGTTAGACATTATTGG+AGG + 32681:16391-16410 None:intergenic 30.0%
! TCTCTAGGAACATGTTAAAA+AGG + 32681:15025-15044 None:intergenic 30.0%
! TCTTGGCATATATTTTCAGT+GGG - 32681:15933-15952 MS.gene68856:intron 30.0%
! TGTAAAAGCTATACTTTTGG+TGG + 32681:16478-16497 None:intergenic 30.0%
! TTCTTGGCATATATTTTCAG+TGG - 32681:15932-15951 MS.gene68856:intron 30.0%
! TTTTACTCATTTTATGGGCA+CGG + 32681:14716-14735 None:intergenic 30.0%
! TTTTCACTCACTTATGGAAT+TGG - 32681:15696-15715 MS.gene68856:CDS 30.0%
!! CACCAATCTTGATGTTTTTA+CGG + 32681:17291-17310 None:intergenic 30.0%
!! CCTGCTTTTACTCATTTTAT+GGG + 32681:14721-14740 None:intergenic 30.0%
!!! AGCGGTATTTTTTTTCCTAA+TGG - 32681:16602-16621 MS.gene68856:intron 30.0%
!!! ATCGTTTTTTAGGTAGAACT+TGG - 32681:15083-15102 MS.gene68856:intron 30.0%
!!! TGCAACAATTTTTTCCTCTT+GGG - 32681:16656-16675 MS.gene68856:intron 30.0%
!!! TTGCAACAATTTTTTCCTCT+TGG - 32681:16655-16674 MS.gene68856:intron 30.0%
AAAAATACCGCTGTAAGTTG+TGG + 32681:16594-16613 None:intergenic 35.0%
AAATCCTAACATCCTATGCT+TGG - 32681:13631-13650 MS.gene68856:CDS 35.0%
AACAACATGTTCTTTCAAGC+AGG - 32681:13581-13600 MS.gene68856:CDS 35.0%
AAGCCATGAATGAATAGGAA+TGG + 32681:16111-16130 None:intergenic 35.0%
AATAACCAACTTGTAAGGTG+AGG + 32681:14016-14035 None:intergenic 35.0%
ACAACATTCAAAATCTTGCC+GGG + 32681:17262-17281 None:intergenic 35.0%
ACATATAACAGACATGATCG+TGG + 32681:17045-17064 None:intergenic 35.0%
ACGCAATCAGTAATTGTAGA+GGG + 32681:16433-16452 None:intergenic 35.0%
AGAAGGAAATGCTTATCAAG+GGG - 32681:13770-13789 MS.gene68856:intron 35.0%
AGGAAGAGAATTTATGTTCC+CGG - 32681:17241-17260 MS.gene68856:CDS 35.0%
ATAACCAACTTGTAAGGTGA+GGG + 32681:14015-14034 None:intergenic 35.0%
ATATTGTTCGCTTATTCCCT+TGG + 32681:15440-15459 None:intergenic 35.0%
ATTGCACCAACACTAACAAT+TGG + 32681:14218-14237 None:intergenic 35.0%
ATTTGGATGGTCAATCTATC+AGG - 32681:17221-17240 MS.gene68856:CDS 35.0%
CAACGAAGTTGTTCTATAGT+AGG + 32681:15178-15197 None:intergenic 35.0%
CATTTCCTTCTTAGCTTCTT+TGG + 32681:13761-13780 None:intergenic 35.0%
CCATAAGTGAGTGAAAATAG+GGG + 32681:15693-15712 None:intergenic 35.0%
CCCATAAAATGAGTAAAAGC+AGG - 32681:14718-14737 MS.gene68856:intron 35.0%
CCCCACTTAGATTAAAGATA+AGG - 32681:13961-13980 MS.gene68856:intron 35.0%
CTGTGATCTTGTTCTAATAC+AGG - 32681:14963-14982 MS.gene68856:intron 35.0%
CTGTTATATGTTGTAACTGC+AGG - 32681:17054-17073 MS.gene68856:intron 35.0%
CTTGAAAGAACATGTTGTTC+GGG + 32681:13580-13599 None:intergenic 35.0%
GAAACTCATTTCCTAGAAGT+TGG + 32681:13839-13858 None:intergenic 35.0%
GAACTTATATTACCTTTCCC+TGG - 32681:14624-14643 MS.gene68856:intron 35.0%
GACCGTAAAAACATCAAGAT+TGG - 32681:17286-17305 MS.gene68856:CDS 35.0%
GCTTGAAAGAACATGTTGTT+CGG + 32681:13581-13600 None:intergenic 35.0%
GTTCCTTAATGCAGCATATA+AGG - 32681:15380-15399 MS.gene68856:intron 35.0%
TACTCAGAAATGACATCATC+AGG + 32681:14759-14778 None:intergenic 35.0%
TATAGTAGGTTCCTCATCAA+CGG + 32681:15164-15183 None:intergenic 35.0%
TATTAGAACAAGATCACAGC+TGG + 32681:14962-14981 None:intergenic 35.0%
TCAAAGACATGGAATACTAG+CGG - 32681:15046-15065 MS.gene68856:intron 35.0%
TCATAGTATCATTTGGGCTT+AGG + 32681:16786-16805 None:intergenic 35.0%
TCTTCATAAATGCATCGCTA+AGG - 32681:15198-15217 MS.gene68856:intron 35.0%
TCTTGCCATTAATCTGAACT+GGG + 32681:17117-17136 None:intergenic 35.0%
TGGTTTATGACACATTGGAA+GGG + 32681:14311-14330 None:intergenic 35.0%
TTAAATGTGCCATCAGACAA+AGG + 32681:15127-15146 None:intergenic 35.0%
TTCCAATGTGTCATAAACCA+GGG - 32681:14311-14330 MS.gene68856:intron 35.0%
TTGACAAGCCATGAATGAAT+AGG + 32681:16116-16135 None:intergenic 35.0%
TTTCAGTATTCAGGTAACAG+AGG - 32681:15311-15330 MS.gene68856:intron 35.0%
TTTGTCTGATGGCACATTTA+AGG - 32681:15126-15145 MS.gene68856:intron 35.0%
! AGGTTCAATATATGGCTTGT+AGG - 32681:14437-14456 MS.gene68856:intron 35.0%
! ATGCTTTTGCATTAGCATCT+AGG - 32681:17179-17198 MS.gene68856:CDS 35.0%
! GATGATGTCATTTCTGAGTA+TGG - 32681:14759-14778 MS.gene68856:CDS 35.0%
! GGTTCAATATATGGCTTGTA+GGG - 32681:14438-14457 MS.gene68856:intron 35.0%
! GTATGTCAGGATTTTCTTTC+AGG + 32681:14683-14702 None:intergenic 35.0%
! TAGATCGAATGGTGTCAATT+TGG - 32681:16217-16236 MS.gene68856:intron 35.0%
! TGCTTTTGCATTAGCATCTA+GGG - 32681:17180-17199 MS.gene68856:CDS 35.0%
! TTTACTCATTTTATGGGCAC+GGG + 32681:14715-14734 None:intergenic 35.0%
!! ACCTTACAAGTTGGTTATTG+GGG - 32681:14017-14036 MS.gene68856:intron 35.0%
!! CACCTTACAAGTTGGTTATT+GGG - 32681:14016-14035 MS.gene68856:intron 35.0%
!! CCCTGCTTTTACTCATTTTA+TGG + 32681:14722-14741 None:intergenic 35.0%
!! TCACCTTACAAGTTGGTTAT+TGG - 32681:14015-14034 MS.gene68856:intron 35.0%
!!! GTTTTTTAGGTAGAACTTGG+AGG - 32681:15086-15105 MS.gene68856:intron 35.0%
!!! TCCATTGTTTTTGCATCCAA+GGG - 32681:15421-15440 MS.gene68856:intron 35.0%
!!! TTCCATTGTTTTTGCATCCA+AGG - 32681:15420-15439 MS.gene68856:intron 35.0%
AAATGTTCATGGGACCATTG+AGG - 32681:14805-14824 MS.gene68856:CDS 40.0%
AACATGTTCTTTCAAGCAGG+TGG - 32681:13584-13603 MS.gene68856:CDS 40.0%
AAGGCACAACCTATTTGTGT+TGG - 32681:16734-16753 MS.gene68856:intron 40.0%
ACCTTGAACCCTATTACTTG+TGG - 32681:14836-14855 MS.gene68856:CDS 40.0%
AGAACCTGAGATGCAAAACT+CGG + 32681:14257-14276 None:intergenic 40.0%
AGAGAGAAGCGAAGGAAAAA+AGG + 32681:15882-15901 None:intergenic 40.0%
ATAAACCAGGGGATTATCCT+TGG - 32681:14323-14342 MS.gene68856:intron 40.0%
ATGCTTGGAAGCAAACTCTT+CGG - 32681:13646-13665 MS.gene68856:CDS 40.0%
CACTGGAATTTCTGCAATGA+TGG - 32681:15356-15375 MS.gene68856:intron 40.0%
CAGATTAATGGCAAGACAAG+AGG - 32681:17121-17140 MS.gene68856:intron 40.0%
CAGGTAACAGAGGAAATTGA+AGG - 32681:15321-15340 MS.gene68856:intron 40.0%
CTGGTTTATGACACATTGGA+AGG + 32681:14312-14331 None:intergenic 40.0%
CTTATACTGTGGTTGTGAAG+AGG - 32681:16901-16920 MS.gene68856:intron 40.0%
CTTCCAATGTGTCATAAACC+AGG - 32681:14310-14329 MS.gene68856:intron 40.0%
CTTTAATCTAAGTGGGGCTT+TGG + 32681:13958-13977 None:intergenic 40.0%
GAAATGAAATTACCTCCCCA+AGG + 32681:14343-14362 None:intergenic 40.0%
GACGCAATCAGTAATTGTAG+AGG + 32681:16434-16453 None:intergenic 40.0%
GCATGTTTCTTCAACCTGAA+TGG + 32681:17149-17168 None:intergenic 40.0%
GTCTTGCCATTAATCTGAAC+TGG + 32681:17118-17137 None:intergenic 40.0%
GTGGCATATATTGTGGAGAT+TGG - 32681:14855-14874 MS.gene68856:intron 40.0%
TAAACCAGGGGATTATCCTT+GGG - 32681:14324-14343 MS.gene68856:intron 40.0%
TAGAACTGTATCCGTTGATG+AGG - 32681:15150-15169 MS.gene68856:intron 40.0%
TCACACCAAAGAAGCTAAGA+AGG - 32681:13753-13772 MS.gene68856:intron 40.0%
TCCAATGTGTCATAAACCAG+GGG - 32681:14312-14331 MS.gene68856:intron 40.0%
TCCCCAATAACCAACTTGTA+AGG + 32681:14021-14040 None:intergenic 40.0%
TCCCTTGGATGCAAAAACAA+TGG + 32681:15425-15444 None:intergenic 40.0%
TCTCAGGTTCTCTTTGACAT+TGG - 32681:14266-14285 MS.gene68856:intron 40.0%
TGGACCCAAATTCATACCTT+AGG + 32681:16081-16100 None:intergenic 40.0%
TTCCATGTCTTTGAGTCTCT+AGG + 32681:15040-15059 None:intergenic 40.0%
TTCCTAGAGACTCAAAGACA+TGG - 32681:15035-15054 MS.gene68856:intron 40.0%
TTGCGTCAAATAGGTATCTC+TGG - 32681:16447-16466 MS.gene68856:intron 40.0%
! AAGAGTTTGCTTCCAAGCAT+AGG + 32681:13646-13665 None:intergenic 40.0%
! AGAACTTGGAGGTTGATTGT+TGG - 32681:15097-15116 MS.gene68856:intron 40.0%
! ATATGCTATGTTTGGAGCCA+AGG - 32681:13705-13724 MS.gene68856:CDS 40.0%
! ATTTTGTGACCTACACTCCA+GGG + 32681:14644-14663 None:intergenic 40.0%
! CCCCTATTTTCACTCACTTA+TGG - 32681:15690-15709 MS.gene68856:CDS 40.0%
! CGAATGGTGTCAATTTGGAT+GGG - 32681:16222-16241 MS.gene68856:intron 40.0%
! CGTAGGCTAATGATTTTGTG+TGG + 32681:16050-16069 None:intergenic 40.0%
! TCGAATGGTGTCAATTTGGA+TGG - 32681:16221-16240 MS.gene68856:intron 40.0%
! TTAAAGGGGGATGTTTTTCC+AGG - 32681:16969-16988 MS.gene68856:intron 40.0%
! TTAACCGAGTTTTGCATCTC+AGG - 32681:14250-14269 MS.gene68856:intron 40.0%
! TTACTCAAGTTGTTCCCAAG+AGG + 32681:16673-16692 None:intergenic 40.0%
!! AATGAGAAGCATTTCCTCCT+TGG + 32681:13725-13744 None:intergenic 40.0%
!! TAATGCAAAAGCATCCTCCT+CGG + 32681:17173-17192 None:intergenic 40.0%
!!! GAAGGCGTACATCGTTTTTT+AGG - 32681:15073-15092 MS.gene68856:intron 40.0%
AAACCAGGGGATTATCCTTG+GGG - 32681:14325-14344 MS.gene68856:intron 45.0%
AAAGAACATGTTGTTCGGGC+TGG + 32681:13576-13595 None:intergenic 45.0%
AAAGCCTCAACCACTGATCT+TGG + 32681:15967-15986 None:intergenic 45.0%
ACATCCAAGATCAGTGGTTG+AGG - 32681:15960-15979 MS.gene68856:intron 45.0%
ACATCCCTCACCTTACAAGT+TGG - 32681:14008-14027 MS.gene68856:intron 45.0%
ATTACCTTTCCCTGGAGTGT+AGG - 32681:14632-14651 MS.gene68856:intron 45.0%
CAAGGTCAAACCTACCTCAA+TGG + 32681:14822-14841 None:intergenic 45.0%
GCCACAAGTAATAGGGTTCA+AGG + 32681:14840-14859 None:intergenic 45.0%
GCTTCCAAGCATAGGATGTT+AGG + 32681:13638-13657 None:intergenic 45.0%
GGACAAACATCCAAGATCAG+TGG - 32681:15954-15973 MS.gene68856:intron 45.0%
GGAGTGTAGGTCACAAAATC+TGG - 32681:14645-14664 MS.gene68856:intron 45.0%
GGCAAATCCTGCTTATCTGA+AGG - 32681:17075-17094 MS.gene68856:intron 45.0%
GGTTGTGAAGAGGATCAATC+TGG - 32681:16911-16930 MS.gene68856:intron 45.0%
GTCCTCCCAGTTCAGATTAA+TGG - 32681:17109-17128 MS.gene68856:intron 45.0%
GTCGTATCCTTCAGATAAGC+AGG + 32681:17085-17104 None:intergenic 45.0%
TACACAGCCACAACTTACAG+CGG - 32681:16584-16603 MS.gene68856:intron 45.0%
TACCTTAGGAAAAGGCTCGT+AGG + 32681:16067-16086 None:intergenic 45.0%
TCCCCTGGTTTATGACACAT+TGG + 32681:14316-14335 None:intergenic 45.0%
TCTTTATGGTGGTATGGGGA+GGG - 32681:14929-14948 MS.gene68856:intron 45.0%
TGCCATTAATCTGAACTGGG+AGG + 32681:17114-17133 None:intergenic 45.0%
TTCTTTATGGTGGTATGGGG+AGG - 32681:14928-14947 MS.gene68856:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + 32681:16336-16355 None:intergenic 45.0%
! ATGGCTTGTAGGGATGAAGA+TGG - 32681:14448-14467 MS.gene68856:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + 32681:16337-16356 None:intergenic 45.0%
! GATTTTGTGACCTACACTCC+AGG + 32681:14645-14664 None:intergenic 45.0%
! GTTGGCTTACCTTTGTCTGA+TGG - 32681:15115-15134 MS.gene68856:intron 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + 32681:16338-16357 None:intergenic 45.0%
! TGGAATACTAGCGGCATTGA+AGG - 32681:15055-15074 MS.gene68856:intron 45.0%
!! CAAGACAAGAGGTACCATTC+AGG - 32681:17132-17151 MS.gene68856:intron 45.0%
!! CATTGGTGTTGTATCCACCA+AGG - 32681:14283-14302 MS.gene68856:intron 45.0%
!! ATAAAGAAATAAATTAAAAA+GGG + 32681:14916-14935 None:intergenic 5.0%
AACCGACGACTCAACCAAGT+TGG + 32681:14123-14142 None:intergenic 50.0%
ACTAAGTGGGGTCAGCAACA+TGG + 32681:16324-16343 None:intergenic 50.0%
ATCACCATATGCGCCACACA+TGG - 32681:15999-16018 MS.gene68856:CDS 50.0%
ATGTTGCTGACCCCACTTAG+TGG - 32681:16323-16342 MS.gene68856:CDS 50.0%
CGGGCAAGTATACGTATGTC+AGG + 32681:14696-14715 None:intergenic 50.0%
CTCGTAACAGAGAGAAGCGA+AGG + 32681:15890-15909 None:intergenic 50.0%
CTTTATGGTGGTATGGGGAG+GGG - 32681:14930-14949 MS.gene68856:intron 50.0%
GGTTGAAGAAACATGCACCG+AGG - 32681:17153-17172 MS.gene68856:CDS 50.0%
GTTCATGGGACCATTGAGGT+AGG - 32681:14809-14828 MS.gene68856:CDS 50.0%
TGAAGAAACATGCACCGAGG+AGG - 32681:17156-17175 MS.gene68856:CDS 50.0%
TGACCCCACTTAGTGGGATA+AGG - 32681:16330-16349 MS.gene68856:CDS 50.0%
TGCCAACTTGGTTGAGTCGT+CGG - 32681:14118-14137 MS.gene68856:intron 50.0%
TGTTGCTGACCCCACTTAGT+GGG - 32681:16324-16343 MS.gene68856:CDS 50.0%
! AGCCTACGAGCCTTTTCCTA+AGG - 32681:16062-16081 MS.gene68856:CDS 50.0%
! GAAGGCACACGATTCAACAC+TGG - 32681:15339-15358 MS.gene68856:intron 50.0%
! TGCTATGTTTGGAGCCAAGG+AGG - 32681:13708-13727 MS.gene68856:CDS 50.0%
ACATTGGAAGGGCTCCTTGG+TGG + 32681:14300-14319 None:intergenic 55.0%
ATATGCGCCACACATGGCTG+AGG - 32681:16005-16024 MS.gene68856:CDS 55.0%
CACACATGGCTGAGGAGCTA+TGG - 32681:16013-16032 MS.gene68856:CDS 55.0%
CATAGCTCCTCAGCCATGTG+TGG + 32681:16015-16034 None:intergenic 55.0%
GACACATTGGAAGGGCTCCT+TGG + 32681:14303-14322 None:intergenic 55.0%
GAGGAGCTATGGTCTCGTCT+TGG - 32681:16024-16043 MS.gene68856:CDS 55.0%
GTGACCTACACTCCAGGGAA+AGG + 32681:14639-14658 None:intergenic 55.0%
TCAGCCATGTGTGGCGCATA+TGG + 32681:16006-16025 None:intergenic 55.0%
!! CATGTTGTTCGGGCTGGTTG+TGG + 32681:13570-13589 None:intergenic 55.0%
CCAGGGGATTATCCTTGGGG+AGG - 32681:14328-14347 MS.gene68856:intron 60.0%
CCTCCCCAAGGATAATCCCC+TGG + 32681:14331-14350 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
32681 gene 13506 17318 13506 ID=MS.gene68856
32681 mRNA 13506 17318 13506 ID=MS.gene68856.t1;Parent=MS.gene68856
32681 exon 17142 17318 17142 ID=MS.gene68856.t1.exon1;Parent=MS.gene68856.t1
32681 CDS 17142 17318 17142 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 16475 16552 16475 ID=MS.gene68856.t1.exon2;Parent=MS.gene68856.t1
32681 CDS 16475 16552 16475 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 16284 16385 16284 ID=MS.gene68856.t1.exon3;Parent=MS.gene68856.t1
32681 CDS 16284 16385 16284 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 15998 16170 15998 ID=MS.gene68856.t1.exon4;Parent=MS.gene68856.t1
32681 CDS 15998 16170 15998 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 15605 15782 15605 ID=MS.gene68856.t1.exon5;Parent=MS.gene68856.t1
32681 CDS 15605 15782 15605 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 15423 15500 15423 ID=MS.gene68856.t1.exon6;Parent=MS.gene68856.t1
32681 CDS 15423 15500 15423 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 14741 14872 14741 ID=MS.gene68856.t1.exon7;Parent=MS.gene68856.t1
32681 CDS 14741 14872 14741 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
32681 exon 13506 13748 13506 ID=MS.gene68856.t1.exon8;Parent=MS.gene68856.t1
32681 CDS 13506 13748 13506 ID=cds.MS.gene68856.t1;Parent=MS.gene68856.t1
Gene Sequence

>MS.gene68856

ATGATGAAATTAGGCAGGGTTAACTCTGCTATCATCATCACATCAAAGTCAACGTTCAAGACCACAACCAGCCCGAACAACATGTTCTTTCAAGCAGGTGGACAACAAAAAGTTGATGTTACACTAAATCCTAACATCCTATGCTTGGAAGCAAACTCTTCGGCTCAGCCTAGAAGTGTAACAAGAATTTCTATTGGTAATATGCTATGTTTGGAGCCAAGGAGGAAATGCTTCTCATTACTATATCTCACACCAAAGAAGCTAAGAAGGAAATGCTTATCAAGGGGTGTAGTTGTGAATTTTAAAGAGATTTGTTATGTTTTTAGTTTTCCAACTTCTAGGAAATGAGTTTCAATAACGTGAACTTGAAAGAAAGTTTGTATTCTTACTATCACGAACTACTTTAATGGAAATTCTTCGATTGGTACTAAAGAAAATTATTGGAAAAACCAAAGCCCCACTTAGATTAAAGATAAGGCTTGACTAGAGTTTATAAAGAGAGACATCCCTCACCTTACAAGTTGGTTATTGGGGATGAGTTAGCCCCAATATAAAAACTTAATACACTCATAAAATCAAATTAAGTGATCCTTCTAGAAGTTAAATAATAACTGCCAACTTGGTTGAGTCGTCGGTTGTTGAATGAACGATTGATAAATCCACCAATTAGGGATTTAAATGAGTTCAATAAGGCATCAAAAGCCTATTACCAATTGTTAGTGTTGGTGCAATATTTGTGCAGATTTAACCGAGTTTTGCATCTCAGGTTCTCTTTGACATTGGTGTTGTATCCACCAAGGAGCCCTTCCAATGTGTCATAAACCAGGGGATTATCCTTGGGGAGGTAATTTCATTTCTTCTGCTTGAAATTTGAGGGTAAACAAATTAAGCAATCATCATAAATTCACAATTTTCTAATGGTTTGAATTGCAGGTTCAATATATGGCTTGTAGGGATGAAGATGGAAATCTGATATCTGCTGATTCCACTAATATGTTAAATGAACATAATCTAGAAAGAATTTCTGAGGAAAAGGTTTCACAATGAAGTTGTCACTTTCTCAATGTTTTCAATATTTGCCGAGTTAAGATTTTGAACCTTTTTTTTTTCCTTGACAAGAACTTATATTACCTTTCCCTGGAGTGTAGGTCACAAAATCTGGAGATTCGTTTGTCCTGAAAGAAAATCCTGACATACGTATACTTGCCCGTGCCCATAAAATGAGTAAAAGCAGGGGAAATGTTGTTAATCCTGATGATGTCATTTCTGAGTATGGAGCAGATTCTCTTCGTTTATATGAAATGTTCATGGGACCATTGAGGTAGGTTTGACCTTGAACCCTATTACTTGTGGCATATATTGTGGAGATTGGTCCTTAATCAAAACAACATTATGATTTTATTCTGCCCCTTTTTAATTTATTTCTTTATGGTGGTATGGGGAGGGGACACTACCAGCTGTGATCTTGTTCTAATACAGGACTCTTACCCCACATCAATTTTCTCTTTGATTTTTACCTTTTTAACATGTTCCTAGAGACTCAAAGACATGGAATACTAGCGGCATTGAAGGCGTACATCGTTTTTTAGGTAGAACTTGGAGGTTGATTGTTGGCTTACCTTTGTCTGATGGCACATTTAAGGATAGAACTGTATCCGTTGATGAGGAACCTACTATAGAACAACTTCGTTGTCTTCATAAATGCATCGCTAAGGTCAATATCTCAACTTTTTAATCATAGTTTTCTTGTGTCTTTGTTTATGGATTTAACAAGCTGATTTGGAACAATTGAGCTAAGAATTTACTTTCAGTATTCAGGTAACAGAGGAAATTGAAGGCACACGATTCAACACTGGAATTTCTGCAATGATGGAGTTCCTTAATGCAGCATATAAGGTATTTATTTGTTTCAACTTCCATTGTTTTTGCATCCAAGGGAATAAGCGAACAATATTGATTTGTCTATGGAATAGGGACTGTATAGAGACTAATTCCAAAACAGACAGATATTACATAAACTAAAACAAAAATAGCAAAGACCAAAAGCAAATTTTCTATTTTTGAGAGATTAAAACAGACGACTTTTTAAAGACTAAATCCGAAAAATTGCATAGGTGATAAAATGTTATTTGAGCCTTATAACTACATAATTATTTTATCTTTAGCTTTAATTGCAGTTTCGGTCCCCTATTTTCACTCACTTATGGAATTGGTCTTTTTTTATCTTATTCATGTTTGGCTTGATGCAATAAGAAGCAAAATGAAAATATGCATCATCATATGTATATCCTATATGGTATAATGTACATCACATCTTTATGAAGTGTATTGTGTTTGGTTTTATTTTTTTTTATTTTTGATAGTTCAAGCGTTCCTTTTTTCCTTCGCTTCTCTCTGTTACGAGACTCGATATGATCTCTATATTTTTCTTGGCATATATTTTCAGTGGGACAAACATCCAAGATCAGTGGTTGAGGCTTTTGTTTTGCTGTTATCACCATATGCGCCACACATGGCTGAGGAGCTATGGTCTCGTCTTGGCCACACAAAATCATTAGCCTACGAGCCTTTTCCTAAGGTATGAATTTGGGTCCATATCAAACCATTCCTATTCATTCATGGCTTGTCAAGTTATGTGTTCACTGATTTTCAATTTATTTTATAAATAGCATACTATCTCCCTATTAAGAAAGATTTAGAGATTAATGAGTTAGATCGAATGGTGTCAATTTGGATGGGCTAATTTAGCTTCTTAAAAAAAAAATGAGTTAGATCTAAATATGATTTATGATAGAACATTATGGCGTAATTTGATCCATGTTGCTGACCCCACTTAGTGGGATAAGGCTTGATTGTTGTTGTTGTTGTTGACAGCATACTATCCTCCAATAATGTCTAACCAATATTTTATTATGTTACACATTCCCTCTACAATTACTGATTGCGTCAAATAGGTATCTCTGGCTTTTCCACCAAAAGTATAGCTTTTACATATTTATCACAAAGGTATATATTTTTTATTTACAAAGAACAAACTGATGCTTAGTGCTAAATTTCATAACTTTCAACAAGTCATAGTACACAGCCACAACTTACAGCGGTATTTTTTTTCCTAATGGTATGATTTGTTAAGTCGTGAATTATATGATTTGCAACAATTTTTTCCTCTTGGGAACAACTTGAGTAAGTGTTTTAATACATTTTGAAACTTCTTATAATTTTATGATAAAGGCACAACCTATTTGTGTTGGTGTTTTTTTTTTGGAAGATAAAAGAGCCTAAGCCCAAATGATACTATGAAAATGAAATAAATTTTAACAAAGTTATTTCGCAAAATTTTGAAAAATAAGAATTTTATGCAAGAATACCAGAAGTCTTTTACAAACATTTAAATACTTATACTGTGGTTGTGAAGAGGATCAATCTGGCATTGATATTTTAGTGACACAATATTTTGAAATCTTTAAAGGGGGATGTTTTTCCAGGTTGTGTTTAAATTTCAATCAAATGAACTTAGTGTCATATCAATACACTAACCACGATCATGTCTGTTATATGTTGTAACTGCAGGCAAATCCTGCTTATCTGAAGGATACGACAGTAGTCCTCCCAGTTCAGATTAATGGCAAGACAAGAGGTACCATTCAGGTTGAAGAAACATGCACCGAGGAGGATGCTTTTGCATTAGCATCTAGGGATGAAAAGCTATCCAAATATTTGGATGGTCAATCTATCAGGAAGAGAATTTATGTTCCCGGCAAGATTTTGAATGTTGTTCTGGACCGTAAAAACATCAAGATTGGTGTACAGTAG

Protein sequence

>MS.gene68856.t1

MMKLGRVNSAIIITSKSTFKTTTSPNNMFFQAGGQQKVDVTLNPNILCLEANSSAQPRSVLFDIGVVSTKEPFQCVINQGIILGEVQYMACRDEDGNLISADSTNMLNEHNLERISEEKVTKSGDSFVLKENPDIRILARAHKMSKSRGNVVNPDDVISEYGADSLRLYEMFMGPLRDSKTWNTSGIEGVHRFLGRTWRLIVGLPLSDGTFKDRTVSVDEEPTIEQLRCLHKCIAKVTEEIEGTRFNTGISAMMEFLNAAYKWDKHPRSVVEAFVLLLSPYAPHMAEELWSRLGHTKSLAYEPFPKANPAYLKDTTVVLPVQINGKTRGTIQVEETCTEEDAFALASRDEKLSKYLDGQSIRKRIYVPGKILNVVLDRKNIKIGVQ