Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072766.t1 | XP_003611062.1 | 96.6 | 233 | 8 | 0 | 1 | 233 | 1 | 233 | 5.50E-123 | 450.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072766.t1 | Q9CAK8 | 69.5 | 233 | 65 | 2 | 2 | 233 | 4 | 231 | 1.1e-82 | 307.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072766.t1 | G7KC04 | 96.6 | 233 | 8 | 0 | 1 | 233 | 1 | 233 | 4.0e-123 | 450.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene072766 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene072766 | 0.854698 | 1.04E-61 | -1.69E-46 |
| MS.gene049173 | MS.gene072766 | 0.840551 | 8.12E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene072766 | 0.822858 | 1.89E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene072766 | 0.868961 | 4.42E-66 | -1.69E-46 |
| MS.gene049285 | MS.gene072766 | 0.847722 | 9.66E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene072766 | 0.819807 | 9.57E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene072766 | 0.805769 | 1.14E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene072766 | 0.812313 | 4.51E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene072766 | 0.855071 | 8.07E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene072766 | 0.829224 | 5.80E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene072766 | 0.817374 | 3.41E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene072766 | 0.801152 | 1.03E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene072766 | 0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene072766 | 0.810566 | 1.08E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene072766 | 0.809492 | 1.84E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene072766 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene072766 | 0.809607 | 1.74E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene072766 | 0.829513 | 4.94E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene072766 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene072766 | 0.820208 | 7.74E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene072766 | 0.822963 | 1.79E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene072766 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene050625 | MS.gene072766 | 0.822182 | 2.72E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene072766 | 0.806832 | 6.79E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene072766 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene072766 | 0.811996 | 5.29E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene072766 | 0.87192 | 4.73E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene072766 | 0.863606 | 2.21E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene072766 | 0.855115 | 7.84E-62 | -1.69E-46 |
| MS.gene05081 | MS.gene072766 | 0.824066 | 9.87E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene072766 | 0.845793 | 3.25E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene072766 | 0.84455 | 7.05E-59 | -1.69E-46 |
| MS.gene050904 | MS.gene072766 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene072766 | 0.858356 | 8.71E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene072766 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene072766 | 0.832524 | 9.00E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene072766 | 0.800376 | 1.48E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene072766 | 0.816355 | 5.77E-52 | -1.69E-46 |
| MS.gene051438 | MS.gene072766 | 0.859702 | 3.44E-63 | -1.69E-46 |
| MS.gene051551 | MS.gene072766 | 0.801972 | 7.00E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene072766 | 0.859751 | 3.33E-63 | -1.69E-46 |
| MS.gene051694 | MS.gene072766 | 0.81954 | 1.10E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene072766 | 0.831451 | 1.66E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene072766 | 0.868062 | 8.63E-66 | -1.69E-46 |
| MS.gene051858 | MS.gene072766 | 0.852809 | 3.62E-61 | -1.69E-46 |
| MS.gene051874 | MS.gene072766 | 0.820192 | 7.81E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene072766 | 0.811253 | 7.68E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene072766 | 0.814865 | 1.24E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene072766 | 0.85397 | 1.68E-61 | -1.69E-46 |
| MS.gene052414 | MS.gene072766 | 0.819265 | 1.27E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene072766 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene072766 | 0.813866 | 2.06E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene072766 | 0.820669 | 6.07E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene072766 | 0.824493 | 7.84E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene072766 | 0.847596 | 1.05E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene072766 | 0.814761 | 1.31E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene072766 | 0.836197 | 1.08E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene072766 | 0.839099 | 1.94E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene072766 | 0.844799 | 6.04E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene072766 | 0.844034 | 9.70E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene072766 | 0.833642 | 4.74E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene072766 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene072766 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene072766 | 0.833737 | 4.49E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene072766 | 0.860678 | 1.75E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene072766 | 0.832777 | 7.79E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene072766 | 0.829615 | 4.66E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene072766 | 0.826535 | 2.57E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene072766 | 0.808595 | 2.87E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene072766 | 0.843584 | 1.28E-58 | -1.69E-46 |
| MS.gene053480 | MS.gene072766 | 0.831897 | 1.29E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene072766 | 0.857588 | 1.47E-62 | -1.69E-46 |
| MS.gene053626 | MS.gene072766 | 0.840365 | 9.09E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene072766 | 0.859571 | 3.77E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene072766 | 0.891302 | 4.50E-74 | -1.69E-46 |
| MS.gene053912 | MS.gene072766 | 0.814303 | 1.65E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene072766 | 0.83716 | 6.12E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene072766 | 0.837564 | 4.83E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene072766 | 0.835163 | 1.97E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene072766 | 0.869329 | 3.36E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene072766 | 0.816904 | 4.35E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene072766 | -0.814921 | 1.20E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene072766 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene072766 | 0.864775 | 9.54E-65 | -1.69E-46 |
| MS.gene05494 | MS.gene072766 | 0.851965 | 6.29E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene072766 | 0.810348 | 1.21E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene072766 | 0.836891 | 7.17E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene072766 | 0.828075 | 1.10E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene072766 | 0.814544 | 1.46E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene072766 | 0.854156 | 1.48E-61 | -1.69E-46 |
| MS.gene055289 | MS.gene072766 | 0.807247 | 5.55E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene072766 | 0.830755 | 2.46E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene072766 | 0.84414 | 9.09E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene072766 | 0.861803 | 7.94E-64 | -1.69E-46 |
| MS.gene055620 | MS.gene072766 | 0.814491 | 1.50E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene072766 | 0.862222 | 5.91E-64 | -1.69E-46 |
| MS.gene055741 | MS.gene072766 | 0.810704 | 1.01E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene072766 | 0.800236 | 1.58E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene072766 | 0.826268 | 2.98E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene072766 | 0.838379 | 2.98E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene072766 | 0.818969 | 1.48E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene072766 | 0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene072766 | 0.811554 | 6.60E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene072766 | 0.809887 | 1.52E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene072766 | 0.853242 | 2.72E-61 | -1.69E-46 |
| MS.gene056083 | MS.gene072766 | 0.820424 | 6.91E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene072766 | 0.810958 | 8.90E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene072766 | 0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene056387 | MS.gene072766 | 0.803355 | 3.63E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene072766 | 0.833758 | 4.44E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene072766 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene072766 | 0.818849 | 1.58E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene072766 | 0.849856 | 2.47E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene072766 | 0.824087 | 9.76E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene072766 | 0.833289 | 5.81E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene072766 | 0.805792 | 1.12E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene072766 | 0.815415 | 9.35E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene072766 | 0.830624 | 2.64E-55 | -1.69E-46 |
| MS.gene05666 | MS.gene072766 | 0.808959 | 2.40E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene072766 | 0.80942 | 1.91E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene072766 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene072766 | 0.805119 | 1.56E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene072766 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene072766 | 0.81879 | 1.63E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene072766 | 0.830514 | 2.81E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene072766 | 0.800752 | 1.24E-48 | -1.69E-46 |
| MS.gene057289 | MS.gene072766 | 0.832933 | 7.12E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene072766 | 0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene072766 | 0.836319 | 1.00E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene072766 | 0.8473 | 1.26E-59 | -1.69E-46 |
| MS.gene057734 | MS.gene072766 | 0.861192 | 1.22E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene072766 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene072766 | 0.82297 | 1.78E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene072766 | 0.833658 | 4.70E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene072766 | 0.82711 | 1.88E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene072766 | 0.81901 | 1.45E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene072766 | 0.803221 | 3.87E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene072766 | 0.836941 | 6.97E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene072766 | 0.811701 | 6.14E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene072766 | 0.842608 | 2.33E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene072766 | 0.827753 | 1.31E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene072766 | 0.838578 | 2.65E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene072766 | 0.837203 | 5.97E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene072766 | 0.827603 | 1.43E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene072766 | 0.829951 | 3.86E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene072766 | 0.828279 | 9.82E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene072766 | 0.837565 | 4.82E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene072766 | 0.855579 | 5.74E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene072766 | 0.852693 | 3.91E-61 | -1.69E-46 |
| MS.gene058948 | MS.gene072766 | 0.841011 | 6.15E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene072766 | 0.819022 | 1.44E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene072766 | 0.872217 | 3.77E-67 | -1.69E-46 |
| MS.gene05913 | MS.gene072766 | 0.823206 | 1.57E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene072766 | 0.836087 | 1.15E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene072766 | 0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene072766 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene072766 | 0.807232 | 5.59E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene072766 | 0.854025 | 1.62E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene072766 | 0.82938 | 5.32E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene072766 | 0.816767 | 4.67E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene072766 | 0.861022 | 1.37E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene072766 | 0.824 | 1.02E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene072766 | 0.844004 | 9.89E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene072766 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene072766 | 0.841958 | 3.46E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene072766 | 0.811395 | 7.15E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene072766 | 0.812966 | 3.25E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene072766 | 0.839004 | 2.05E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene072766 | 0.820107 | 8.17E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene072766 | 0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene072766 | 0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene072766 | 0.856063 | 4.14E-62 | -1.69E-46 |
| MS.gene06092 | MS.gene072766 | 0.855412 | 6.42E-62 | -1.69E-46 |
| MS.gene06097 | MS.gene072766 | 0.852543 | 4.31E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene072766 | 0.812419 | 4.28E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene072766 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene072766 | 0.843951 | 1.02E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene072766 | 0.812755 | 3.61E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072766.t1 | MTR_5g010010 | 96.380 | 221 | 8 | 0 | 13 | 233 | 13 | 233 | 2.48e-155 | 430 |
| MS.gene072766.t1 | MTR_7g053480 | 70.297 | 101 | 30 | 0 | 1 | 101 | 1 | 101 | 7.54e-41 | 136 |
| MS.gene072766.t1 | MTR_3g110020 | 70.588 | 51 | 15 | 0 | 1 | 51 | 1 | 51 | 1.35e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072766.t1 | AT1G63970 | 83.237 | 173 | 29 | 0 | 61 | 233 | 59 | 231 | 1.10e-105 | 305 |
| MS.gene072766.t1 | AT1G63970 | 81.818 | 99 | 18 | 0 | 61 | 159 | 59 | 157 | 3.43e-56 | 176 |
Find 61 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGTTATCCTTTAATTAT+TGG | 0.154047 | 5.3:+3738389 | MS.gene072766:CDS |
| TTAATTCCACCAATAATTAA+AGG | 0.221109 | 5.3:-3738398 | None:intergenic |
| TCACTGTTTGTTTCAGCTTC+AGG | 0.284381 | 5.3:+3738254 | MS.gene072766:CDS |
| CGCTTCTGTGGTAAATATAA+AGG | 0.303097 | 5.3:+3744917 | MS.gene072766:CDS |
| AAAGAATAAGAGAATGGAAT+TGG | 0.329681 | 5.3:-3738191 | None:intergenic |
| CATGAGGCAGGTTATGATAT+TGG | 0.350566 | 5.3:+3744801 | MS.gene072766:CDS |
| GCTTTAGGTCTTCCTGATAT+AGG | 0.382227 | 5.3:+3739423 | MS.gene072766:CDS |
| TTGAAGGAGTAGCGGAGATT+GGG | 0.383157 | 5.3:-3738316 | None:intergenic |
| TGGAATTGGGTGAGAAGATT+TGG | 0.392377 | 5.3:-3738177 | None:intergenic |
| TCCTTGTGTGGGCTTAGTTT+CGG | 0.392429 | 5.3:-3744855 | None:intergenic |
| TTTGAAGGAGTAGCGGAGAT+TGG | 0.395299 | 5.3:-3738317 | None:intergenic |
| AAGAATAAGAGAATGGAATT+GGG | 0.439995 | 5.3:-3738190 | None:intergenic |
| ATCGATTTCAACTGAGGCTG+TGG | 0.440478 | 5.3:-3738288 | None:intergenic |
| GTGGAAGGGTTGTGATTCTT+CGG | 0.447373 | 5.3:+3739473 | MS.gene072766:CDS |
| GGTTATCCTTTAATTATTGG+TGG | 0.460157 | 5.3:+3738392 | MS.gene072766:CDS |
| AGAATATACTCACAGATTCA+TGG | 0.463953 | 5.3:-3739503 | None:intergenic |
| CATGAAAAGGTTGATAGCCT+TGG | 0.468863 | 5.3:+3744948 | MS.gene072766:CDS |
| CCCACACAAGGATGCTATCA+AGG | 0.475088 | 5.3:+3744866 | MS.gene072766:CDS |
| AGAGGAAAAGAATAAGAGAA+TGG | 0.478928 | 5.3:-3738197 | None:intergenic |
| AAACCATGGCCAACCCGAAA+AGG | 0.483370 | 5.3:-3738347 | None:intergenic |
| GATTTGGTGGGTGTTGTGAA+TGG | 0.484659 | 5.3:-3738161 | None:intergenic |
| GCCTTGATAGCATCCTTGTG+TGG | 0.485497 | 5.3:-3744867 | None:intergenic |
| TCCAAGCAGTGCAGATAAGT+TGG | 0.486196 | 5.3:-3744889 | None:intergenic |
| TTCCACTTAGGATCAGAATC+AGG | 0.496430 | 5.3:-3739456 | None:intergenic |
| ATTTGGTGGGTGTTGTGAAT+GGG | 0.497158 | 5.3:-3738160 | None:intergenic |
| GACCTTCATCGATTGGAACC+TGG | 0.499572 | 5.3:+3738371 | MS.gene072766:CDS |
| CCTTGATAGCATCCTTGTGT+GGG | 0.507271 | 5.3:-3744866 | None:intergenic |
| CGAAAAGGAAGAACCTTTGA+AGG | 0.510185 | 5.3:-3738332 | None:intergenic |
| ATTAATATACCTCATGATAG+AGG | 0.512773 | 5.3:+3738416 | MS.gene072766:CDS |
| GCCAACTTATCTGCACTGCT+TGG | 0.513880 | 5.3:+3744888 | MS.gene072766:CDS |
| TTCCTGATTCTGATCCTAAG+TGG | 0.534340 | 5.3:+3739454 | MS.gene072766:CDS |
| ATGATTTGAGATGGAGGGTA+TGG | 0.536370 | 5.3:-3738226 | None:intergenic |
| GTCAGACTTATGCATGAGGC+AGG | 0.542152 | 5.3:+3744789 | MS.gene072766:CDS |
| TCGATTTCAACTGAGGCTGT+GGG | 0.542972 | 5.3:-3738287 | None:intergenic |
| CCAATAATTAAAGGATAACC+AGG | 0.547141 | 5.3:-3738389 | None:intergenic |
| GAATCACAACCCTTCCACTT+AGG | 0.553850 | 5.3:-3739468 | None:intergenic |
| TGATTCTGATCCTAAGTGGA+AGG | 0.553947 | 5.3:+3739458 | MS.gene072766:CDS |
| AATCTCCGCTACTCCTTCAA+AGG | 0.556988 | 5.3:+3738319 | MS.gene072766:CDS |
| AACCAGGTTCCAATCGATGA+AGG | 0.565616 | 5.3:-3738373 | None:intergenic |
| GGATTTATCGATTTCAACTG+AGG | 0.577148 | 5.3:-3738294 | None:intergenic |
| TGGAGGGTATGGTGTTTGAG+AGG | 0.579851 | 5.3:-3738215 | None:intergenic |
| TGAAGGAGTAGCGGAGATTG+GGG | 0.589337 | 5.3:-3738315 | None:intergenic |
| GGTTGCGAGGCTCATTCTGA+TGG | 0.591970 | 5.3:+3738437 | MS.gene072766:CDS |
| GGTGGGTGTTGTGAATGGGA+AGG | 0.594415 | 5.3:-3738156 | None:intergenic |
| AATTGGGTGAGAAGATTTGG+TGG | 0.594739 | 5.3:-3738174 | None:intergenic |
| ATTGGGTGAGAAGATTTGGT+GGG | 0.596035 | 5.3:-3738173 | None:intergenic |
| GCTTGGAGTTGACGCTTCTG+TGG | 0.600936 | 5.3:+3744905 | MS.gene072766:CDS |
| GGATGTTCTGCTTCACTGCG+TGG | 0.611052 | 5.3:+3739383 | MS.gene072766:CDS |
| AAGAACCTTTGAAGGAGTAG+CGG | 0.614741 | 5.3:-3738324 | None:intergenic |
| TGGTGATGATTTGAGATGGA+GGG | 0.617114 | 5.3:-3738231 | None:intergenic |
| ACCTCATGATAGAGGTTGCG+AGG | 0.621758 | 5.3:+3738424 | MS.gene072766:CDS |
| GCCGAAACTAAGCCCACACA+AGG | 0.626457 | 5.3:+3744854 | MS.gene072766:CDS |
| ATGCAACATTGATACTTCAG+AGG | 0.627600 | 5.3:+3744832 | MS.gene072766:CDS |
| GATTCTGATCCTAAGTGGAA+GGG | 0.630398 | 5.3:+3739459 | MS.gene072766:CDS |
| ATCGATGAAGGTCAAAACCA+TGG | 0.631860 | 5.3:-3738361 | None:intergenic |
| GTGATGGTGATGATTTGAGA+TGG | 0.635547 | 5.3:-3738235 | None:intergenic |
| ATGGTGATGATTTGAGATGG+AGG | 0.646685 | 5.3:-3738232 | None:intergenic |
| GCCTCGCAACCTCTATCATG+AGG | 0.647110 | 5.3:-3738425 | None:intergenic |
| TGTTAGAGAAGATGAAGACA+TGG | 0.663229 | 5.3:-3738120 | None:intergenic |
| GAAGCTGAAACAAACAGTGA+TGG | 0.680351 | 5.3:-3738251 | None:intergenic |
| ACAGGTCAGACTTATGCATG+AGG | 0.696663 | 5.3:+3744785 | MS.gene072766:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3738122 | 3745022 | 3738122 | ID=MS.gene072766 |
| chr5.3 | mRNA | 3738122 | 3745022 | 3738122 | ID=MS.gene072766.t1;Parent=MS.gene072766 |
| chr5.3 | exon | 3738122 | 3738458 | 3738122 | ID=MS.gene072766.t1.exon1;Parent=MS.gene072766.t1 |
| chr5.3 | CDS | 3738122 | 3738458 | 3738122 | ID=cds.MS.gene072766.t1;Parent=MS.gene072766.t1 |
| chr5.3 | exon | 3739382 | 3739512 | 3739382 | ID=MS.gene072766.t1.exon2;Parent=MS.gene072766.t1 |
| chr5.3 | CDS | 3739382 | 3739512 | 3739382 | ID=cds.MS.gene072766.t1;Parent=MS.gene072766.t1 |
| chr5.3 | exon | 3744789 | 3745022 | 3744789 | ID=MS.gene072766.t1.exon3;Parent=MS.gene072766.t1 |
| chr5.3 | CDS | 3744789 | 3745022 | 3744789 | ID=cds.MS.gene072766.t1;Parent=MS.gene072766.t1 |
| Gene Sequence |
| Protein sequence |
