AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69694


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69694.t1 MTR_8g064490 96.854 445 14 0 1 445 5 449 0.0 897
MS.gene69694.t1 MTR_5g079860 36.571 350 203 10 77 417 41 380 5.06e-55 189
MS.gene69694.t1 MTR_5g005050 33.889 360 195 10 88 417 11 357 8.31e-51 176
MS.gene69694.t1 MTR_5g005050 31.389 360 169 13 88 417 11 322 7.95e-36 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69694.t1 AT1G60230 74.430 395 93 1 47 441 71 457 0.0 629
MS.gene69694.t1 AT3G19630 36.512 367 191 13 87 424 10 363 1.24e-59 199
MS.gene69694.t1 AT2G39670 34.473 351 205 10 80 417 63 401 1.94e-46 166
MS.gene69694.t1 AT2G39670 34.181 354 205 10 80 417 63 404 6.15e-46 165

Find 0 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAATATAAGTTTAG+AGG + 56872:11738-11757 MS.gene69694:intron 10.0%
!!! TAATTATGAATTTTAAACTT+TGG + 56872:7990-8009 MS.gene69694:intron 10.0%
!! AAAATGTGTTGAATAATAAA+AGG - 56872:10834-10853 MS.gene69694:intergenic 15.0%
!! AAATGTGTTGAATAATAAAA+GGG - 56872:10833-10852 MS.gene69694:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - 56872:7254-7273 MS.gene69694:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + 56872:7253-7272 MS.gene69694:intron 15.0%
!! ACTTATTTAATTGATAAACT+TGG + 56872:8859-8878 MS.gene69694:intron 15.0%
!! AGAATCAAGATAAAATAAAA+GGG - 56872:11556-11575 MS.gene69694:intergenic 15.0%
!! TTATAGGTATTATGTATATA+TGG - 56872:9839-9858 MS.gene69694:intergenic 15.0%
!!! ATTTGAATGATGTTATATTT+TGG + 56872:7024-7043 MS.gene69694:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - 56872:7127-7146 MS.gene69694:intergenic 15.0%
!!! CGTTAAATTATTTTTGTATA+AGG + 56872:6403-6422 MS.gene69694:intron 15.0%
!!! TATACATAAAAGAGTATTTT+AGG - 56872:6907-6926 MS.gene69694:intergenic 15.0%
!!! TTTGAATGATGTTATATTTT+GGG + 56872:7025-7044 MS.gene69694:intron 15.0%
!! AAACTAACCAATAGTTAATA+AGG + 56872:7244-7263 MS.gene69694:intron 20.0%
!! AAATAAAGAAGTTAGAGATA+GGG + 56872:11666-11685 MS.gene69694:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - 56872:7287-7306 MS.gene69694:intergenic 20.0%
!! AATTCCTCAATTTAAACATA+AGG - 56872:10978-10997 MS.gene69694:intergenic 20.0%
!! AATTTCTATAGACATGAATT+AGG - 56872:7436-7455 MS.gene69694:intergenic 20.0%
!! ACAATTTATTAAGCCTTAAT+CGG - 56872:8962-8981 MS.gene69694:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - 56872:7167-7186 MS.gene69694:intergenic 20.0%
!! AGTTGCTATACATTTATTAT+AGG + 56872:9208-9227 MS.gene69694:intron 20.0%
!! AGTTTATACTTTCGATTTAT+AGG - 56872:9556-9575 MS.gene69694:intergenic 20.0%
!! ATTAAATCTAAATCAGTTGA+AGG - 56872:10485-10504 MS.gene69694:intergenic 20.0%
!! CAGAATCAAGATAAAATAAA+AGG - 56872:11557-11576 MS.gene69694:intergenic 20.0%
!! GACAAGATAAAGATTATTAT+AGG - 56872:9855-9874 MS.gene69694:intergenic 20.0%
!! GTTGCTATACATTTATTATA+GGG + 56872:9209-9228 MS.gene69694:intron 20.0%
!! TTAAATCTAAATCAGTTGAA+GGG - 56872:10484-10503 MS.gene69694:intergenic 20.0%
!! TTTGAAAAAGACATACAATT+GGG + 56872:11400-11419 MS.gene69694:intron 20.0%
!!! AATTTGAAACAAAATAGAGA+AGG - 56872:8179-8198 MS.gene69694:intergenic 20.0%
!!! ACTTGATGACATTTATATTT+TGG + 56872:8257-8276 MS.gene69694:intron 20.0%
!!! ATTTCTTTATTGCTATTTGT+TGG + 56872:9431-9450 MS.gene69694:intron 20.0%
!!! CTTTTATTTTATCTTGATTC+TGG + 56872:11555-11574 MS.gene69694:intron 20.0%
!!! TATAAATCGAAAGTATAAAC+TGG + 56872:9555-9574 MS.gene69694:CDS 20.0%
!!! TTATGTATTGTGTGTTATTA+AGG + 56872:7367-7386 MS.gene69694:intron 20.0%
!!! TTATTTTCAATCTCATAATG+AGG + 56872:11007-11026 MS.gene69694:intron 20.0%
! AAAATAAATCATAACAGCGT+TGG - 56872:10919-10938 MS.gene69694:intergenic 25.0%
! AAACTTATGAAAACAGCTTA+TGG - 56872:6498-6517 MS.gene69694:intergenic 25.0%
! AAATAAATCATAACAGCGTT+GGG - 56872:10918-10937 MS.gene69694:intergenic 25.0%
! AACCTTATATTTGTGTTTGA+AGG - 56872:9614-9633 MS.gene69694:intergenic 25.0%
! AATAAAGAAGTTAGAGATAG+GGG + 56872:11667-11686 MS.gene69694:intron 25.0%
! AATAATGCAAGAATTTGAGT+AGG + 56872:9951-9970 MS.gene69694:intron 25.0%
! AATGGAATTGTTGAAAAAGA+TGG + 56872:10197-10216 MS.gene69694:intron 25.0%
! ACACGTTTAATCTCATATTT+AGG + 56872:7616-7635 MS.gene69694:intron 25.0%
! ACATGCAATAAAAGTAAAGA+CGG - 56872:8557-8576 MS.gene69694:intergenic 25.0%
! ACATTATCAATGTTATGAAG+AGG - 56872:9245-9264 MS.gene69694:intergenic 25.0%
! AGAAAGAATTGCAAACATTA+TGG - 56872:11893-11912 MS.gene69694:intergenic 25.0%
! AGATTAGATTAATCTTGCAA+GGG - 56872:12060-12079 MS.gene69694:intergenic 25.0%
! ATAAAAACTCAACTAGATCT+GGG + 56872:10684-10703 MS.gene69694:intron 25.0%
! ATAATGCAAGAATTTGAGTA+GGG + 56872:9952-9971 MS.gene69694:intron 25.0%
! ATACATTTATTATAGGGCAT+GGG + 56872:9215-9234 MS.gene69694:intron 25.0%
! ATAGCAAAATTGACAATTCA+TGG - 56872:8483-8502 MS.gene69694:intergenic 25.0%
! ATTGCGTAAATGTTGAAAAT+TGG + 56872:10035-10054 MS.gene69694:intron 25.0%
! CTAAAATACTCCAATAAAAG+AGG + 56872:10952-10971 MS.gene69694:intron 25.0%
! CTGTTTATAAGGATGAAAAT+AGG + 56872:8792-8811 MS.gene69694:intron 25.0%
! GAAATAAAGAAGTTAGAGAT+AGG + 56872:11665-11684 MS.gene69694:intron 25.0%
! GATCATTATAGACAGAAAAA+AGG - 56872:8519-8538 MS.gene69694:intergenic 25.0%
! GTAATATACCAATTGAGATA+TGG + 56872:10246-10265 MS.gene69694:intron 25.0%
! GTTTATTAAGAGCTTATTTG+AGG + 56872:9987-10006 MS.gene69694:intron 25.0%
! GTTTGAAAAAGACATACAAT+TGG + 56872:11399-11418 MS.gene69694:intron 25.0%
! TAATGATAAAATTGAACTGC+AGG + 56872:9011-9030 MS.gene69694:intron 25.0%
! TAGTTTCAAAAGCAATACTT+TGG - 56872:7230-7249 MS.gene69694:intergenic 25.0%
! TATACATTTATTATAGGGCA+TGG + 56872:9214-9233 MS.gene69694:intron 25.0%
! TATGTATGGAAACAACATTT+GGG + 56872:7824-7843 MS.gene69694:CDS 25.0%
! TATTATGTTAGGTAAGAAAC+TGG + 56872:9524-9543 MS.gene69694:intron 25.0%
! TCACAAAAAATATTTGTGTC+TGG + 56872:11610-11629 MS.gene69694:intron 25.0%
! TCCATGCAAAATTTACAAAA+AGG + 56872:9798-9817 MS.gene69694:intron 25.0%
! TTATGGTATGAACTACAATA+AGG - 56872:11876-11895 MS.gene69694:intergenic 25.0%
! TTCCTTCAAACACAAATATA+AGG + 56872:9609-9628 MS.gene69694:CDS 25.0%
! TTGCGTAAATGTTGAAAATT+GGG + 56872:10036-10055 MS.gene69694:intron 25.0%
!! AAGAATCTAGAGTACATTTA+AGG - 56872:7478-7497 MS.gene69694:intergenic 25.0%
!! ATTTGAGTATGGATTTTGTA+TGG + 56872:6877-6896 MS.gene69694:intron 25.0%
!! TCAATGTAATTTTGCAGAAT+GGG + 56872:8584-8603 MS.gene69694:intron 25.0%
!! TCCTTTTTGTAAATTTTGCA+TGG - 56872:9802-9821 MS.gene69694:intergenic 25.0%
!! TTCAATGTAATTTTGCAGAA+TGG + 56872:8583-8602 MS.gene69694:intron 25.0%
!! TTTGGTCATTCAAAACTTTT+AGG + 56872:8927-8946 MS.gene69694:intron 25.0%
!!! AATTGTCAATTTTGCTATAC+AGG + 56872:8485-8504 MS.gene69694:CDS 25.0%
!!! ATTGTATAGTTTTACATGTC+AGG + 56872:7545-7564 MS.gene69694:intron 25.0%
!!! CTCTTTTATTGGAGTATTTT+AGG - 56872:10954-10973 MS.gene69694:intergenic 25.0%
!!! TAAGCAATTTTTTATCTCTC+CGG - 56872:11452-11471 MS.gene69694:intergenic 25.0%
!!! TATTGATGTTTGTTTTATGC+AGG + 56872:6242-6261 MS.gene69694:intron 25.0%
!!! TATTTGTTATTTCTATCTCC+TGG + 56872:8039-8058 MS.gene69694:intron 25.0%
!!! TTGTATAGTTTTACATGTCA+GGG + 56872:7546-7565 MS.gene69694:intron 25.0%
AAAAGATTTAGACCCTGTTT+GGG - 56872:6822-6841 MS.gene69693:intergenic 30.0%
AACCATGATAAAGGAAAAAC+AGG + 56872:11374-11393 MS.gene69694:intron 30.0%
AAGAAAGTCATATGCTTTCA+CGG - 56872:11699-11718 MS.gene69694:intergenic 30.0%
AAGCAAATATATGAACAAGG+GGG + 56872:11480-11499 MS.gene69694:intron 30.0%
AATAAGATGTTTACCCAAAC+AGG + 56872:6806-6825 MS.gene69694:intron 30.0%
AATCAGTAATGTTAATGCAC+TGG + 56872:7951-7970 MS.gene69694:intron 30.0%
ACACTGACATCTATTATGTT+AGG + 56872:9513-9532 MS.gene69694:intron 30.0%
ACCAATGTTGTATTTATGGT+AGG + 56872:8692-8711 MS.gene69694:intron 30.0%
ACCTAAGAATTCAAGATTAG+AGG + 56872:10173-10192 MS.gene69694:intron 30.0%
ACCTACCATAAATACAACAT+TGG - 56872:8696-8715 MS.gene69694:intergenic 30.0%
ACCTCTAATCTTGAATTCTT+AGG - 56872:10177-10196 MS.gene69694:intergenic 30.0%
AGACAAACTACTGTTCTTAA+TGG + 56872:10600-10619 MS.gene69694:intron 30.0%
AGCAAGCAAATATATGAACA+AGG + 56872:11477-11496 MS.gene69694:intron 30.0%
ATAAAGAAGTTAGAGATAGG+GGG + 56872:11668-11687 MS.gene69694:intron 30.0%
ATAAGAGAATGACAAATGAG+TGG + 56872:11229-11248 MS.gene69694:intron 30.0%
ATAAGATGTTTACCCAAACA+GGG + 56872:6807-6826 MS.gene69694:intron 30.0%
ATAAGGTTATGTTTCAGTTG+AGG + 56872:9763-9782 MS.gene69694:intron 30.0%
ATATACCAATTGAGATATGG+AGG + 56872:10249-10268 MS.gene69694:intron 30.0%
ATGTTATGGAAACGTATGTA+TGG + 56872:7810-7829 MS.gene69694:CDS 30.0%
CAAAAATAGGAGTCAAAAAG+TGG - 56872:7732-7751 MS.gene69694:intergenic 30.0%
CAAGCAAATATATGAACAAG+GGG + 56872:11479-11498 MS.gene69694:intron 30.0%
CATAAATACAACATTGGTGA+TGG - 56872:8690-8709 MS.gene69694:intergenic 30.0%
CATCACCAATGTTGTATTTA+TGG + 56872:8688-8707 MS.gene69694:CDS 30.0%
CATTAAAGCTGCAGATATTA+TGG + 56872:9265-9284 MS.gene69694:CDS 30.0%
CTGAAACATAACCTTATCTT+TGG - 56872:9760-9779 MS.gene69694:intergenic 30.0%
CTGGATGATATATTGGTATT+TGG + 56872:11629-11648 MS.gene69694:intron 30.0%
GAAGAAGATTAACACTTGAT+AGG + 56872:10129-10148 MS.gene69694:intron 30.0%
GAATAATAAAAGGGAGTGAA+TGG - 56872:10824-10843 MS.gene69694:intergenic 30.0%
GAATTCAAGATTAGAGGTAA+TGG + 56872:10179-10198 MS.gene69694:intron 30.0%
GACAAACTACTGTTCTTAAT+GGG + 56872:10601-10620 MS.gene69694:intron 30.0%
GAGATTAGATTAATCTTGCA+AGG - 56872:12061-12080 MS.gene69694:intergenic 30.0%
GATAAAAACTCAACTAGATC+TGG + 56872:10683-10702 MS.gene69694:intron 30.0%
GATTAAACACTACTAGATAC+TGG - 56872:7931-7950 MS.gene69694:intergenic 30.0%
GCAAGCAAATATATGAACAA+GGG + 56872:11478-11497 MS.gene69694:intron 30.0%
GTAATATAAATTACTCCCTC+CGG - 56872:10660-10679 MS.gene69694:intergenic 30.0%
GTATGTATGGAAACAACATT+TGG + 56872:7823-7842 MS.gene69694:CDS 30.0%
GTATTAGTAAGCGATATTTG+AGG + 56872:6977-6996 MS.gene69694:intron 30.0%
GTGGTAAGAGAAATAAGAAA+CGG - 56872:6078-6097 MS.gene69694:intergenic 30.0%
TAAATTGCCTGAACAGTTAT+AGG + 56872:9916-9935 MS.gene69694:intron 30.0%
TAATGCAAGAATTTGAGTAG+GGG + 56872:9953-9972 MS.gene69694:intron 30.0%
TACATTTATTATAGGGCATG+GGG + 56872:9216-9235 MS.gene69694:intron 30.0%
TACTTCCTCCCTAATTAAAA+GGG - 56872:6583-6602 MS.gene69694:intergenic 30.0%
TAGAAATTCATCATCTACTG+AGG + 56872:7448-7467 MS.gene69694:intron 30.0%
TATACCAATTGAGATATGGA+GGG + 56872:10250-10269 MS.gene69694:intron 30.0%
TATCCATTGACCACAAAAAT+AGG - 56872:7745-7764 MS.gene69694:intergenic 30.0%
TATTTCCTATAGAAGTCTTG+AGG + 56872:7587-7606 MS.gene69694:intron 30.0%
TGATGTGTTCAATTTGAGTA+TGG + 56872:6866-6885 MS.gene69694:intron 30.0%
TGCAAACAAGTTATGTTTGT+TGG + 56872:10397-10416 MS.gene69694:intron 30.0%
TGGTAATATATAGTTGGACT+AGG + 56872:10224-10243 MS.gene69694:intron 30.0%
TTACTTCCTCCCTAATTAAA+AGG - 56872:6584-6603 MS.gene69694:intergenic 30.0%
TTCATCCTTATAAACAGAAG+TGG - 56872:8789-8808 MS.gene69694:intergenic 30.0%
TTGATTAGAACATGTACAAG+AGG + 56872:9053-9072 MS.gene69694:intron 30.0%
TTGTCATGTTTCCAAAGATA+AGG + 56872:9746-9765 MS.gene69694:intron 30.0%
TTTCACTTTATTGCTTGAGT+TGG + 56872:9686-9705 MS.gene69694:intron 30.0%
TTTGTGAAGAAGAAATGTTG+TGG - 56872:6022-6041 MS.gene69694:intergenic 30.0%
TTTGTGTCTGGATGATATAT+TGG + 56872:11622-11641 MS.gene69694:intron 30.0%
! AAAAAACCACTGCGTATTTT+GGG - 56872:11815-11834 MS.gene69694:intergenic 30.0%
! AAAAGCATATTTCGCTGAAA+AGG + 56872:8898-8917 MS.gene69694:intron 30.0%
! AAACATAAGGCCTCTTTTAT+TGG - 56872:10965-10984 MS.gene69694:intergenic 30.0%
! ATATGTTTTGTGAGACTGTT+TGG - 56872:6523-6542 MS.gene69694:intergenic 30.0%
! ATTGCAGATTTTATTCACAC+TGG + 56872:8373-8392 MS.gene69694:intron 30.0%
! ATTTTATTCACACTGGATGA+TGG + 56872:8380-8399 MS.gene69694:CDS 30.0%
! ATTTTCTGAATTACCCCTTA+TGG - 56872:10544-10563 MS.gene69694:intergenic 30.0%
! CTTTTGCTTATATATGAGAC+CGG + 56872:10638-10657 MS.gene69694:intron 30.0%
! GTTTTATAAATCCCAGATAG+TGG + 56872:10290-10309 MS.gene69694:intron 30.0%
! TAAAAAACCACTGCGTATTT+TGG - 56872:11816-11835 MS.gene69694:intergenic 30.0%
! TAATAACCCTTTTACTCTCA+TGG + 56872:10509-10528 MS.gene69694:intron 30.0%
! TATGTTTTGTGAGACTGTTT+GGG - 56872:6522-6541 MS.gene69694:intergenic 30.0%
! TGGGTTTTTGTCATCAAAAT+TGG + 56872:10055-10074 MS.gene69694:intron 30.0%
! TTTTATTCACACTGGATGAT+GGG + 56872:8381-8400 MS.gene69694:CDS 30.0%
! TTTTCTCCTTTACATTGCAT+TGG + 56872:9152-9171 MS.gene69694:intron 30.0%
! TTTTCTGAATTACCCCTTAT+GGG - 56872:10543-10562 MS.gene69694:intergenic 30.0%
! TTTTGTCATCAAAATTGGAG+TGG + 56872:10060-10079 MS.gene69694:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + 56872:7336-7355 MS.gene69694:intron 30.0%
!! AGGTTTTAGTGAGAGAAAAT+GGG - 56872:6053-6072 MS.gene69694:intergenic 30.0%
!! CAAACATGCCCTTTTAATTA+GGG + 56872:6572-6591 MS.gene69694:intron 30.0%
!! GTTCAAAAGTGCTTCTTAAA+GGG + 56872:6297-6316 MS.gene69694:CDS 30.0%
!! TACCTGTTTTTCCTTTATCA+TGG - 56872:11379-11398 MS.gene69694:intergenic 30.0%
!! TTATTTCTATCTCCTGGTTA+AGG + 56872:8045-8064 MS.gene69694:intron 30.0%
!!! CTGTTTTTTGTTTCTTCCTT+CGG + 56872:7650-7669 MS.gene69694:intron 30.0%
!!! CTTTTTGACTCCTATTTTTG+TGG + 56872:7732-7751 MS.gene69694:intron 30.0%
!!! GATGTTATATTTTGGGATGA+AGG + 56872:7032-7051 MS.gene69694:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - 56872:7335-7354 MS.gene69694:intergenic 30.0%
AAACACTGACACATTGACAT+CGG + 56872:6619-6638 MS.gene69694:intron 35.0%
AAGGGTAAAATGGTTGGATT+TGG - 56872:10798-10817 MS.gene69694:intergenic 35.0%
ACAAAAAGGAATGTATGAGC+TGG + 56872:9812-9831 MS.gene69694:intron 35.0%
ACAGTTATAGGAGTTTGAGT+TGG + 56872:9928-9947 MS.gene69694:intron 35.0%
ACATTCCATGTCATAAGACT+TGG + 56872:11929-11948 MS.gene69694:intron 35.0%
ACATTTATTATAGGGCATGG+GGG + 56872:9217-9236 MS.gene69694:intron 35.0%
ACTTGTTCCATGAGAGTAAA+AGG - 56872:10519-10538 MS.gene69694:intergenic 35.0%
AGCATGCTATTGACAAGAAT+GGG + 56872:11161-11180 MS.gene69694:intron 35.0%
AGTGAGAGAAAATGGGATAA+TGG - 56872:6046-6065 MS.gene69694:intergenic 35.0%
ATAAAATTGAACTGCAGGTG+TGG + 56872:9016-9035 MS.gene69694:intron 35.0%
ATACCAATTGAGATATGGAG+GGG + 56872:10251-10270 MS.gene69694:intron 35.0%
ATATTATGGTGCATGACCAA+GGG + 56872:9279-9298 MS.gene69694:CDS 35.0%
ATCTCATTCAATCCACATAG+TGG + 56872:12076-12095 MS.gene69694:CDS 35.0%
CAAAAAGGAATGTATGAGCT+GGG + 56872:9813-9832 MS.gene69694:intron 35.0%
CAAAAGATTTAGACCCTGTT+TGG - 56872:6823-6842 MS.gene69694:intergenic 35.0%
CAAATCCTCAAGACTTCTAT+AGG - 56872:7595-7614 MS.gene69694:intergenic 35.0%
CAGCTTATGGCATTGTTTAT+AGG - 56872:6485-6504 MS.gene69694:intergenic 35.0%
CATACGTTTCCATAACATCA+TGG - 56872:7808-7827 MS.gene69694:intergenic 35.0%
CTACTCTACAAAGTCATTTG+TGG - 56872:9877-9896 MS.gene69694:intergenic 35.0%
CTATTGACAAGAATGGGAAA+AGG + 56872:11167-11186 MS.gene69694:intron 35.0%
CTCTAGATTCTTGAATGAGT+TGG + 56872:7486-7505 MS.gene69694:intron 35.0%
CTTGTTCCATGAGAGTAAAA+GGG - 56872:10518-10537 MS.gene69694:intergenic 35.0%
GAAGATTAACACTTGATAGG+AGG + 56872:10132-10151 MS.gene69694:intron 35.0%
GAAGGAATTAATGACAGGTT+AGG + 56872:9655-9674 MS.gene69694:intron 35.0%
GGCTGATGGTAATATATAGT+TGG + 56872:10218-10237 MS.gene69694:intron 35.0%
GTTATTAAGGTTAGACAGCT+CGG + 56872:7380-7399 MS.gene69694:intron 35.0%
TAAAGAAGTTAGAGATAGGG+GGG + 56872:11669-11688 MS.gene69694:intron 35.0%
TAATATCGCTCGCAGTTATT+CGG + 56872:11192-11211 MS.gene69694:intron 35.0%
TAGCATGCTATTGACAAGAA+TGG + 56872:11160-11179 MS.gene69694:intron 35.0%
TCAAACTCCTATAACTGTTC+AGG - 56872:9926-9945 MS.gene69694:intergenic 35.0%
TCCATTGAACATGTGGTTTA+GGG + 56872:7403-7422 MS.gene69694:intron 35.0%
TCTTTGTTCAAACCTTAACC+AGG - 56872:8060-8079 MS.gene69694:intergenic 35.0%
TGAATGGATGAAGGGTAAAA+TGG - 56872:10808-10827 MS.gene69694:intergenic 35.0%
TGCTTGAAGGAATTAATGAC+AGG + 56872:9650-9669 MS.gene69694:CDS 35.0%
TGGTCAATGGATACAGAAAT+GGG + 56872:7752-7771 MS.gene69694:intron 35.0%
TGTACCTCAGCAATTCAAAA+TGG + 56872:12261-12280 MS.gene69694:CDS 35.0%
TTCAATCATCCTTTCCTCTT+TGG - 56872:12119-12138 MS.gene69694:intergenic 35.0%
TTGGAAACATGACAAAAGAC+AGG - 56872:9741-9760 MS.gene69694:intergenic 35.0%
TTGGTATTTGGAGAATCGAA+AGG + 56872:11641-11660 MS.gene69694:intron 35.0%
TTGTTGAAAAAGATGGCTGA+TGG + 56872:10204-10223 MS.gene69694:intron 35.0%
TTTCACCACAAAAAGTCAAC+CGG + 56872:10734-10753 MS.gene69694:intron 35.0%
TTTCCTCCAATGCAATGTAA+AGG - 56872:9161-9180 MS.gene69694:intergenic 35.0%
TTTGAATGCAACTACTGATG+AGG + 56872:9400-9419 MS.gene69694:CDS 35.0%
TTTGAGTATGTGATGCTTGA+AGG + 56872:9637-9656 MS.gene69694:CDS 35.0%
! AGATGCCACTTCTGTTTATA+AGG + 56872:8781-8800 MS.gene69694:intron 35.0%
! ATGGTTGGATTTGGATCTTT+TGG - 56872:10789-10808 MS.gene69694:intergenic 35.0%
! CCTAATTAAAAGGGCATGTT+TGG - 56872:6574-6593 MS.gene69694:intergenic 35.0%
! GAGGCCTTATGTTTAAATTG+AGG + 56872:10971-10990 MS.gene69694:intron 35.0%
! GCTTACACAGTCTTTTTACA+TGG - 56872:11292-11311 MS.gene69694:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - 56872:7205-7224 MS.gene69694:intergenic 35.0%
! GTCTATAATGATCGATTCAG+TGG + 56872:8526-8545 MS.gene69694:intron 35.0%
! TACTAGCGTATATTTGAGAC+CGG - 56872:10374-10393 MS.gene69694:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - 56872:7201-7220 MS.gene69694:intergenic 35.0%
! TTAAAAGGGCATGTTTGGAT+TGG - 56872:6569-6588 MS.gene69694:intergenic 35.0%
! TTTTGAATTGCTGAGGTACA+CGG - 56872:12261-12280 MS.gene69694:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - 56872:7101-7120 MS.gene69694:intergenic 35.0%
!! ATACAATTGGGTTCTGAAAG+AGG + 56872:11412-11431 MS.gene69694:intron 35.0%
!! CCAAACATGCCCTTTTAATT+AGG + 56872:6571-6590 MS.gene69694:intron 35.0%
!! GAGGTTTTAGTGAGAGAAAA+TGG - 56872:6054-6073 MS.gene69694:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + 56872:6431-6450 MS.gene69694:intron 35.0%
!! GGTTCAAAAGTGCTTCTTAA+AGG + 56872:6296-6315 MS.gene69694:CDS 35.0%
!! GTCAATTTTGCTATACAGGA+AGG + 56872:8489-8508 MS.gene69694:CDS 35.0%
!! TAAGGAAAGCCTTTTTCACT+AGG - 56872:11858-11877 MS.gene69694:intergenic 35.0%
!! TCTGAAAGAGGTTTTATCGT+AGG + 56872:11424-11443 MS.gene69694:intron 35.0%
!! TTAGCTTGCGATCAATAAGA+AGG - 56872:9187-9206 MS.gene69694:intergenic 35.0%
!!! ACTCCTATTTTTGTGGTCAA+TGG + 56872:7739-7758 MS.gene69694:intron 35.0%
!!! TGTTTGTTTTATGCAGGAGA+TGG + 56872:6248-6267 MS.gene69694:intron 35.0%
AAAAGGGAGTGAATGGATGA+AGG - 56872:10817-10836 MS.gene69693:intergenic 40.0%
AAAGGGAGTGAATGGATGAA+GGG - 56872:10816-10835 MS.gene69694:intergenic 40.0%
AAGAAGAAATGTTGTGGAGG+AGG - 56872:6016-6035 MS.gene69694:intergenic 40.0%
AAGAGAAATAAGAAACGGCG+AGG - 56872:6073-6092 MS.gene69694:intergenic 40.0%
AAGGAAGAGATGAAGCAGAA+AGG - 56872:6116-6135 MS.gene69694:intergenic 40.0%
AATCCCCGTCTATAAGAACA+AGG + 56872:11263-11282 MS.gene69694:intron 40.0%
AATCCCCTCCATATCTCAAT+TGG - 56872:10257-10276 MS.gene69694:intergenic 40.0%
AATGAGAGAAGTTGAAGGTG+TGG - 56872:6152-6171 MS.gene69694:intergenic 40.0%
ACCAGAATGAGAGAAGTTGA+AGG - 56872:6157-6176 MS.gene69694:intergenic 40.0%
ACCTCAGCAATTCAAAATGG+TGG + 56872:12264-12283 MS.gene69694:CDS 40.0%
ACCTTCAACTTCTCTCATTC+TGG + 56872:6153-6172 MS.gene69694:CDS 40.0%
ACTAACAGCTAGTGTACAGT+TGG - 56872:9381-9400 MS.gene69694:intergenic 40.0%
AGGCTAATCGAGCTTGTAAA+GGG + 56872:12031-12050 MS.gene69694:CDS 40.0%
ATCATCCTTTCCTCTTTGGT+TGG - 56872:12115-12134 MS.gene69694:intergenic 40.0%
ATGGAACAAGTTCCCATAAG+GGG + 56872:10528-10547 MS.gene69694:intron 40.0%
ATGTCATCAAGTAACCTCCA+AGG - 56872:8249-8268 MS.gene69694:intergenic 40.0%
ATTCCGAAATATGCTAGCTG+AGG + 56872:12138-12157 MS.gene69694:CDS 40.0%
ATTGTCATGTGTGCTAGAGA+TGG + 56872:8977-8996 MS.gene69694:intron 40.0%
CAGCAATTCAAAATGGTGGT+TGG + 56872:12268-12287 MS.gene69694:CDS 40.0%
CATATTTCGCTGAAAAGGCT+AGG + 56872:8903-8922 MS.gene69694:intron 40.0%
CATCAAAATTGGAGTGGTGT+AGG + 56872:10066-10085 MS.gene69694:intron 40.0%
CATCCTTGTTCTTATAGACG+GGG - 56872:11269-11288 MS.gene69694:intergenic 40.0%
CATCTTCAACATGAATCCGA+AGG - 56872:7669-7688 MS.gene69694:intergenic 40.0%
CATGGAACAAGTTCCCATAA+GGG + 56872:10527-10546 MS.gene69694:intron 40.0%
CCAAGAGCAATAATAGACAG+AGG + 56872:9483-9502 MS.gene69694:intron 40.0%
CCATTGAACATGTGGTTTAG+GGG + 56872:7404-7423 MS.gene69694:intron 40.0%
CCTCTGTCTATTATTGCTCT+TGG - 56872:9486-9505 MS.gene69694:intergenic 40.0%
CGGTTGTTCACAAGTGAAAT+TGG + 56872:8662-8681 MS.gene69694:CDS 40.0%
CTGAAGAAAGATCCACTATG+TGG - 56872:12091-12110 MS.gene69694:intergenic 40.0%
GAGTGAACATGCAGATTTCA+AGG + 56872:8095-8114 MS.gene69694:CDS 40.0%
GATATTATGGTGCATGACCA+AGG + 56872:9278-9297 MS.gene69694:CDS 40.0%
GCATCCTTGTTCTTATAGAC+GGG - 56872:11270-11289 MS.gene69694:intergenic 40.0%
GGCATCCTTGTTCTTATAGA+CGG - 56872:11271-11290 MS.gene69694:intergenic 40.0%
GTAACACCAACACTTCTGAT+AGG - 56872:6727-6746 MS.gene69694:intergenic 40.0%
GTCCATTGAACATGTGGTTT+AGG + 56872:7402-7421 MS.gene69694:intron 40.0%
GTGAAGAAGAAATGTTGTGG+AGG - 56872:6019-6038 MS.gene69694:intergenic 40.0%
GTGGTCAATGGATACAGAAA+TGG + 56872:7751-7770 MS.gene69694:intron 40.0%
GTGTACAGTTGGATTCATGA+AGG - 56872:9370-9389 MS.gene69694:intergenic 40.0%
GTTGTCATACCTTGTGATAC+AGG + 56872:8419-8438 MS.gene69694:CDS 40.0%
TAGAGTTTATATGCTCCCTC+CGG + 56872:10352-10371 MS.gene69694:intron 40.0%
TAGGTGTGATAGACCGATTA+AGG + 56872:8946-8965 MS.gene69694:intron 40.0%
TCATGGAACAAGTTCCCATA+AGG + 56872:10526-10545 MS.gene69694:intron 40.0%
TCCTTCATGTATTTGAGCGT+GGG + 56872:7882-7901 MS.gene69694:intron 40.0%
TCCTTTATCATGGTTGCTCT+CGG - 56872:11369-11388 MS.gene69694:intergenic 40.0%
TCTAGTAATACACGCAACCT+TGG + 56872:8229-8248 MS.gene69694:intron 40.0%
TCTCCTTTACATTGCATTGG+AGG + 56872:9155-9174 MS.gene69694:intron 40.0%
TGCTTATATATGAGACCGGA+GGG + 56872:10642-10661 MS.gene69694:intron 40.0%
TGGATGAAGGGTAAAATGGT+TGG - 56872:10804-10823 MS.gene69694:intergenic 40.0%
TTGCTTATATATGAGACCGG+AGG + 56872:10641-10660 MS.gene69694:intron 40.0%
TTGTCATGTGTGCTAGAGAT+GGG + 56872:8978-8997 MS.gene69694:intron 40.0%
TTTCTTCAGACCAACCAAAG+AGG + 56872:12102-12121 MS.gene69694:CDS 40.0%
! ACCACCATTTTGAATTGCTG+AGG - 56872:12268-12287 MS.gene69694:intergenic 40.0%
! AGCATCCAAGTCTTATGACA+TGG - 56872:11937-11956 MS.gene69694:intergenic 40.0%
! AGTTTTACATGTCAGGGTGA+TGG + 56872:7552-7571 MS.gene69694:intron 40.0%
! CAGAAATGGGTTCAATCACA+TGG + 56872:7765-7784 MS.gene69694:intron 40.0%
! GAAGTGGCATCTTATTTGCT+AGG - 56872:8773-8792 MS.gene69694:intergenic 40.0%
! GCTTTTCGTGACTACTTCTA+TGG - 56872:9464-9483 MS.gene69694:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - 56872:7202-7221 MS.gene69694:intergenic 40.0%
! TGGATTTGTTCATGGCTAGA+TGG + 56872:10757-10776 MS.gene69694:intron 40.0%
!! ACATGCCCTTTTAATTAGGG+AGG + 56872:6575-6594 MS.gene69694:intron 40.0%
!! CAGAAGTGTTGGTGTTACAT+AGG + 56872:6729-6748 MS.gene69694:intron 40.0%
!! GTTAATGCACTGGTTCTTCA+GGG + 56872:7961-7980 MS.gene69694:intron 40.0%
!! TGTTAATGCACTGGTTCTTC+AGG + 56872:7960-7979 MS.gene69694:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + 56872:7340-7359 MS.gene69694:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - 56872:7359-7340 MS.gene69694:intergenic 40.0%
AAGGTCACTGTTTCAACCAG+TGG + 56872:9320-9339 MS.gene69694:CDS 45.0%
AATCACATGGATACAGGCCA+GGG + 56872:7778-7797 MS.gene69694:CDS 45.0%
ACAAGAGCAGTTCAATGCAG+TGG - 56872:11091-11110 MS.gene69694:intergenic 45.0%
ACACCAACACTTCTGATAGG+TGG - 56872:6724-6743 MS.gene69694:intergenic 45.0%
AGCAGCAACAACCACTTGTT+TGG + 56872:11044-11063 MS.gene69694:intron 45.0%
AGGTCACTGTTTCAACCAGT+GGG + 56872:9321-9340 MS.gene69694:CDS 45.0%
AGTAATACACGCAACCTTGG+AGG + 56872:8232-8251 MS.gene69694:intron 45.0%
ATCTGATCATCGCCTCTACT+CGG - 56872:12187-12206 MS.gene69694:intergenic 45.0%
ATGTTGCGCACATTAGGCTT+AGG + 56872:8827-8846 MS.gene69694:intron 45.0%
CACCAACACTTCTGATAGGT+GGG - 56872:6723-6742 MS.gene69694:intergenic 45.0%
CCCCTAAACCACATGTTCAA+TGG - 56872:7407-7426 MS.gene69694:intergenic 45.0%
CTAGCCATGAACAAATCCAC+CGG - 56872:10756-10775 MS.gene69694:intergenic 45.0%
CTCCTTCATGTATTTGAGCG+TGG + 56872:7881-7900 MS.gene69694:intron 45.0%
CTGCCTCAGCTAGCATATTT+CGG - 56872:12144-12163 MS.gene69694:intergenic 45.0%
GAGATGAAGCAGAAAGGAAG+CGG - 56872:6110-6129 MS.gene69694:intergenic 45.0%
GAGGCTAATCGAGCTTGTAA+AGG + 56872:12030-12049 MS.gene69694:CDS 45.0%
GCAGCAATGAAGATGCAAAG+AGG + 56872:12011-12030 MS.gene69694:intron 45.0%
GCCTTTATGCTCCACTATCT+GGG - 56872:10304-10323 MS.gene69694:intergenic 45.0%
GGAGTGGTGTAGGAACAAAA+AGG + 56872:10076-10095 MS.gene69694:intron 45.0%
GGGTTCAATCACATGGATAC+AGG + 56872:7772-7791 MS.gene69694:CDS 45.0%
GGTCATAGCTGATGAGATAG+AGG - 56872:11070-11089 MS.gene69694:intergenic 45.0%
GTCTCACTCATGCTAATCAG+CGG - 56872:10880-10899 MS.gene69694:intergenic 45.0%
GTGTGTGTTTCCAGTCAAGT+TGG + 56872:8452-8471 MS.gene69694:CDS 45.0%
TCACAATAGCAGTCATCGCT+CGG - 56872:10326-10345 MS.gene69694:intergenic 45.0%
TCAGACCAACCAAAGAGGAA+AGG + 56872:12107-12126 MS.gene69694:CDS 45.0%
TCATACCTTGTGATACAGGC+AGG + 56872:8423-8442 MS.gene69694:CDS 45.0%
TGAGATAGAGGCCAAACAAG+TGG - 56872:11058-11077 MS.gene69694:intergenic 45.0%
TGCTAGCTATAGCAGTGTAG+CGG - 56872:11145-11164 MS.gene69694:intergenic 45.0%
TGGTTGAAACAGTGACCTTG+CGG - 56872:9319-9338 MS.gene69694:intergenic 45.0%
TGTCATGTGTGCTAGAGATG+GGG + 56872:8979-8998 MS.gene69694:intron 45.0%
TGTCCCACATGTGTGGATAT+CGG - 56872:6695-6714 MS.gene69694:intergenic 45.0%
TGTCCGATATCCACACATGT+GGG + 56872:6689-6708 MS.gene69694:intron 45.0%
! AGCGTATATTTGAGACCGGA+GGG - 56872:10370-10389 MS.gene69694:intergenic 45.0%
! AGTGTTGCAGTTTCGAGTAG+AGG + 56872:6275-6294 MS.gene69694:CDS 45.0%
! ATCTGGGACTTACTAGTGAG+AGG + 56872:10700-10719 MS.gene69694:intron 45.0%
! CATCATACTGACGAGTTGGA+AGG + 56872:7849-7868 MS.gene69694:CDS 45.0%
! TAGCGTATATTTGAGACCGG+AGG - 56872:10371-10390 MS.gene69694:intergenic 45.0%
! TCAACCGGTGGATTTGTTCA+TGG + 56872:10749-10768 MS.gene69694:intron 45.0%
!! AAAGCCTTTTTCACTAGGCG+GGG - 56872:11853-11872 MS.gene69694:intergenic 45.0%
!! AGAGGTTTTATCGTAGGCTC+CGG + 56872:11430-11449 MS.gene69694:intron 45.0%
!! AGCCTGCTCAACTATTTCTG+CGG - 56872:8630-8649 MS.gene69694:intergenic 45.0%
!! ATCCACCGGTTGACTTTTTG+TGG - 56872:10742-10761 MS.gene69694:intergenic 45.0%
!! CTCTGAAACTGGTCTAGAAC+TGG - 56872:11782-11801 MS.gene69694:intergenic 45.0%
!! GAAAGCCTTTTTCACTAGGC+GGG - 56872:11854-11873 MS.gene69694:intergenic 45.0%
!! GGAAAGCCTTTTTCACTAGG+CGG - 56872:11855-11874 MS.gene69694:intergenic 45.0%
!! TCCCAGATAGTGGAGCATAA+AGG + 56872:10300-10319 MS.gene69694:intron 45.0%
!!! AGCAGGCTGTTTTTGCTAGA+CGG + 56872:8642-8661 MS.gene69694:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + 56872:7339-7358 MS.gene69694:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - 56872:7358-7339 MS.gene69694:intergenic 45.0%
!!! GTCCTTTTAAGACCGAGTAG+AGG + 56872:12172-12191 MS.gene69694:CDS 45.0%
ACACTTCTGATAGGTGGGTC+CGG - 56872:6718-6737 MS.gene69694:intergenic 50.0%
AGCCTAATGTGCGCAACATC+AGG - 56872:8826-8845 MS.gene69694:intergenic 50.0%
AGCCTGATGTTGCGCACATT+AGG + 56872:8821-8840 MS.gene69694:intron 50.0%
AGCGTCTGATGGAACTAGGA+AGG + 56872:8143-8162 MS.gene69694:CDS 50.0%
AGCTCGGTCCATTGAACATG+TGG + 56872:7396-7415 MS.gene69694:intron 50.0%
ATGGCTGCATGTGGTCAGTT+AGG + 56872:12205-12224 MS.gene69694:CDS 50.0%
ATGTGTGCTAGAGATGGGGA+GGG + 56872:8983-9002 MS.gene69694:intron 50.0%
CAATCACATGGATACAGGCC+AGG + 56872:7777-7796 MS.gene69694:CDS 50.0%
CACCACAAAAAGTCAACCGG+TGG + 56872:10737-10756 MS.gene69694:intron 50.0%
CATGCTAATCAGCGGTGGAA+GGG - 56872:10872-10891 MS.gene69694:intergenic 50.0%
CATGGCACATCCAACTTGAC+TGG - 56872:8465-8484 MS.gene69694:intergenic 50.0%
CGAAATATGCTAGCTGAGGC+AGG + 56872:12142-12161 MS.gene69694:CDS 50.0%
CGCCTCTACTCGGTCTTAAA+AGG - 56872:12177-12196 MS.gene69694:intergenic 50.0%
GAAATTCACGCAGCGTCTGA+TGG + 56872:8132-8151 MS.gene69694:CDS 50.0%
GAGTAGAGGCGATGATCAGA+TGG + 56872:12186-12205 MS.gene69694:CDS 50.0%
GATGATCAGATGGCTGCATG+TGG + 56872:12196-12215 MS.gene69694:CDS 50.0%
GCCCACGCTCAAATACATGA+AGG - 56872:7886-7905 MS.gene69694:intergenic 50.0%
GCCGAGAGCAACCATGATAA+AGG + 56872:11365-11384 MS.gene69694:intron 50.0%
GCTTCTTGAGACACTTCGTG+AGG + 56872:9582-9601 MS.gene69694:CDS 50.0%
GGCCTTTATGCTCCACTATC+TGG - 56872:10305-10324 MS.gene69694:intergenic 50.0%
GGTTGAAACAGTGACCTTGC+GGG - 56872:9318-9337 MS.gene69694:intergenic 50.0%
GTAGTCCTGCCTGTATCACA+AGG - 56872:8431-8450 MS.gene69694:intergenic 50.0%
GTGTCCGATATCCACACATG+TGG + 56872:6688-6707 MS.gene69694:intron 50.0%
GTTGAAACAGTGACCTTGCG+GGG - 56872:9317-9336 MS.gene69694:intergenic 50.0%
TATCCACACATGTGGGACAC+CGG + 56872:6696-6715 MS.gene69694:intron 50.0%
TCACGACTAGTGTGAGGACA+CGG + 56872:11503-11522 MS.gene69694:intron 50.0%
TCACTCATGCTAATCAGCGG+TGG - 56872:10877-10896 MS.gene69694:intergenic 50.0%
TCATGCTAATCAGCGGTGGA+AGG - 56872:10873-10892 MS.gene69694:intergenic 50.0%
TCGCTGAAAAGGCTAGGCTT+TGG + 56872:8909-8928 MS.gene69694:intron 50.0%
TGAAGGAAACGTCTGAGCTG+CGG - 56872:9353-9372 MS.gene69694:intergenic 50.0%
TGCCGCAGAAATAGTTGAGC+AGG + 56872:8625-8644 MS.gene69694:CDS 50.0%
TTGAAACAGTGACCTTGCGG+GGG - 56872:9316-9335 MS.gene69694:intergenic 50.0%
! GAAGTTGAAGGTGTGGTCAG+CGG - 56872:6145-6164 MS.gene69694:intergenic 50.0%
! GACCCACCTATCAGAAGTGT+TGG + 56872:6718-6737 MS.gene69694:intron 50.0%
! TGCATGTCCTCTAGCTTCCA+GGG + 56872:11113-11132 MS.gene69694:intron 50.0%
!! ATTCACACTGGATGATGGGC+TGG + 56872:8385-8404 MS.gene69694:CDS 50.0%
ACGCAGCGTCTGATGGAACT+AGG + 56872:8139-8158 MS.gene69694:CDS 55.0%
ACTAGTGTGAGGACACGGTG+AGG + 56872:11508-11527 MS.gene69694:intron 55.0%
AGCGGTGGAAGGGAAGGAAA+AGG - 56872:10862-10881 MS.gene69694:intergenic 55.0%
ATCGGAGCTTGAATGGTGCC+GGG - 56872:12235-12254 MS.gene69694:intergenic 55.0%
CAGGGCAGGCCATGATGTTA+TGG + 56872:7796-7815 MS.gene69694:CDS 55.0%
CAGTCCCCGCCTAGTGAAAA+AGG + 56872:11846-11865 MS.gene69694:intron 55.0%
CATAACATCATGGCCTGCCC+TGG - 56872:7798-7817 MS.gene69694:intergenic 55.0%
CATCGGAGCTTGAATGGTGC+CGG - 56872:12236-12255 MS.gene69694:intergenic 55.0%
CATGTGTGCTAGAGATGGGG+AGG + 56872:8982-9001 MS.gene69694:intron 55.0%
CCAGAGCCCAAAATACGCAG+TGG + 56872:11806-11825 MS.gene69694:intron 55.0%
CTAATCAGCGGTGGAAGGGA+AGG - 56872:10868-10887 MS.gene69694:intergenic 55.0%
GCGCACATTAGGCTTAGGCT+AGG + 56872:8832-8851 MS.gene69694:intron 55.0%
GGCGCATCATACTGACGAGT+TGG + 56872:7845-7864 MS.gene69694:CDS 55.0%
GTGTGGTCAGCGGAGATAGA+AGG - 56872:6135-6154 MS.gene69694:intergenic 55.0%
TGCTGAGGTACACGGAGCAT+CGG - 56872:12253-12272 MS.gene69694:intergenic 55.0%
TGTGGTCAGTTAGGCAAGCC+CGG + 56872:12214-12233 MS.gene69694:CDS 55.0%
TGTGTGCTAGAGATGGGGAG+GGG + 56872:8984-9003 MS.gene69694:intron 55.0%
! CTGCATGTCCTCTAGCTTCC+AGG + 56872:11112-11131 MS.gene69694:intron 55.0%
! GCATGTCCTCTAGCTTCCAG+GGG + 56872:11114-11133 MS.gene69694:intron 55.0%
!! ACGGAGCATCGGAGCTTGAA+TGG - 56872:12242-12261 MS.gene69694:intergenic 55.0%
!! CCACTGCGTATTTTGGGCTC+TGG - 56872:11809-11828 MS.gene69694:intergenic 55.0%
!! CTTTTTCACTAGGCGGGGAC+TGG - 56872:11848-11867 MS.gene69694:intergenic 55.0%
!! GCTCTGGAGAGCTCTGAAAC+TGG - 56872:11793-11812 MS.gene69694:intergenic 55.0%
ACATGGATACAGGCCAGGGC+AGG + 56872:7782-7801 MS.gene69694:CDS 60.0%
AGAAAGGAAGCGGCGAGAGG+GGG - 56872:6100-6119 MS.gene69694:intergenic 60.0%
AGCAGAAAGGAAGCGGCGAG+AGG - 56872:6103-6122 MS.gene69694:intergenic 60.0%
AGGGGGTCACGACTAGTGTG+AGG + 56872:11497-11516 MS.gene69694:intron 60.0%
CAGAAAGGAAGCGGCGAGAG+GGG - 56872:6101-6120 MS.gene69694:intergenic 60.0%
GCAGAAAGGAAGCGGCGAGA+GGG - 56872:6102-6121 MS.gene69694:intergenic 60.0%
GCTTCATTTCAGCCCCCGCA+AGG + 56872:9301-9320 MS.gene69694:CDS 60.0%
GGGGGCTGAAATGAAGCCCT+TGG - 56872:9298-9317 MS.gene69694:intergenic 60.0%
GTGCGCAACATCAGGCTGTC+TGG - 56872:8818-8837 MS.gene69694:intergenic 60.0%
GAGCAGCCCCTGGAAGCTAG+AGG - 56872:11123-11142 MS.gene69694:intergenic 65.0%
GAGCTGCGGAACAAGCCCAC+TGG - 56872:9339-9358 MS.gene69694:intergenic 65.0%
GGTCCGGTGTCCCACATGTG+TGG - 56872:6702-6721 MS.gene69694:intergenic 65.0%
AAGGAAGCGGCGAGAGGGGG+TGG - 56872:6097-6116 MS.gene69694:intergenic 70.0%
! CAGTGTAGCGGAGCAGCCCC+TGG - 56872:11133-11152 MS.gene69694:intergenic 70.0%


Chromosome Type Strat End Strand Name
56872 gene 5982 12312 5982 ID=MS.gene69694
56872 mRNA 5982 12312 5982 ID=MS.gene69694.t1;Parent=MS.gene69694
56872 exon 5982 6174 5982 ID=MS.gene69694.t1.exon1;Parent=MS.gene69694.t1
56872 CDS 5982 6174 5982 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 6264 6340 6264 ID=MS.gene69694.t1.exon2;Parent=MS.gene69694.t1
56872 CDS 6264 6340 6264 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 7768 7870 7768 ID=MS.gene69694.t1.exon3;Parent=MS.gene69694.t1
56872 CDS 7768 7870 7768 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 8067 8164 8067 ID=MS.gene69694.t1.exon4;Parent=MS.gene69694.t1
56872 CDS 8067 8164 8067 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 8380 8510 8380 ID=MS.gene69694.t1.exon5;Parent=MS.gene69694.t1
56872 CDS 8380 8510 8380 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 8601 8709 8601 ID=MS.gene69694.t1.exon6;Parent=MS.gene69694.t1
56872 CDS 8601 8709 8601 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 9230 9421 9230 ID=MS.gene69694.t1.exon7;Parent=MS.gene69694.t1
56872 CDS 9230 9421 9230 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 9535 9671 9535 ID=MS.gene69694.t1.exon8;Parent=MS.gene69694.t1
56872 CDS 9535 9671 9535 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
56872 exon 12015 12312 12015 ID=MS.gene69694.t1.exon9;Parent=MS.gene69694.t1
56872 CDS 12015 12312 12015 ID=cds.MS.gene69694.t1;Parent=MS.gene69694.t1
Gene Sequence

>MS.gene69694

ATGAGCATGGCGACGAGCGCATTCGCTAACTCCTCCTCCACAACATTTCTTCTTCACAAAACCATTATCCCATTTTCTCTCACTAAAACCTCGCCGTTTCTTATTTCTCTTACCACCCCCTCTCGCCGCTTCCTTTCTGCTTCATCTCTTCCTTCTATCTCCGCTGACCACACCTTCAACTTCTCTCATTCTGGTCACTATTTTTCAATATTCATCTTTTTTTCATATATATAAGCGTTTTGCTTTTATGTTTTTTGATTTATTGATGTTTGTTTTATGCAGGAGATGGAAATAGTGTTGCAGTTTCGAGTAGAGGTTCAAAAGTGCTTCTTAAAGGGATGACTTACTCTGAACTTGAAGTATGTTTTCTTTTTCATAAGCGTTTTTCTTTAAAGTTATTTCTATAACAAAAGATAAATAACGTTAAATTATTTTTGTATAAGGTATAAGCTGTTTTCATAAGCTATCTTGGAGAACTTATGAAAATGAGCTGAAAACAACCTATAAACAATGCCATAAGCTGTTTTCATAAGTTTGCCCAAACAGTCTCACAAAACATATACAAATAGATAAACTTAAATAAGCCAATCCAAACATGCCCTTTTAATTAGGGAGGAAGTAATAATAATGAACTATTAAACACTGACACATTGACATCGGTAAATATTTTTAAAAAAAATGAGTTGATTGAACGTAATCACATGTCGTGTCCGATATCCACACATGTGGGACACCGGACCCACCTATCAGAAGTGTTGGTGTTACATAGGAAATAACTTGTACATAAGCTCTTATCATGATAAGCGCTTGTGCTATAAGATTTAAATAAGATGTTTACCCAAACAGGGTCTAAATCTTTTGTGTAGACAAGTTGATAGTGTATTTGATGTGTTCAATTTGAGTATGGATTTTGTATGGTGTTCCTAAAATACTCTTTTATGTATAGATTATATGTGTTCAACTCTGACTTTTTCGTCTCTAAAGACAAATTAATAGTATTAGTAAGCGATATTTGAGGAAAAACTTATTAATGTATTTAGTAATTTGAATGATGTTATATTTTGGGATGAAGGTATTATTATCAATAAAAAAATTGTGCTAACTTTAATACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAATTTGTTTCAAAATGAGTGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTTCAATTTTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTGCTTTTGAAACTAACCAATAGTTAATAAGGATAATTTGGTAAAATAACCATTCTCTTTCTTTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGAGGGAGTATTATGTATTGTGTGTTATTAAGGTTAGACAGCTCGGTCCATTGAACATGTGGTTTAGGGGTTGATACCTAATTCATGTCTATAGAAATTCATCATCTACTGAGGCTGTCCTTAAATGTACTCTAGATTCTTGAATGAGTTGGTAAAAAAATGATGTGTGTGAAAGATGTCATAAAAATATTGTATAGTTTTACATGTCAGGGTGATGGTTATAAATTAGTTATTTCCTATAGAAGTCTTGAGGATTTGAACACGTTTAATCTCATATTTAGGAGTTTAATTCTCTGTTTTTTGTTTCTTCCTTCGGATTCATGTTGAAGATGTCATGAACAGAATAAAATATAAAATTGTGTATATCGATTTCCACTTTTTGACTCCTATTTTTGTGGTCAATGGATACAGAAATGGGTTCAATCACATGGATACAGGCCAGGGCAGGCCATGATGTTATGGAAACGTATGTATGGAAACAACATTTGGGCGCATCATACTGACGAGTTGGAAGGTAATTTCTTCTCCTTCATGTATTTGAGCGTGGGCAAAAGATATTGCTTTTTTAATACCAGTATCTAGTAGTGTTTAATCAATCAGTAATGTTAATGCACTGGTTCTTCAGGGAACAGTTAATTATGAATTTTAAACTTTGGAATTTGAATTGACACTCATGTAATTTTATTTGTTATTTCTATCTCCTGGTTAAGGTTTGAACAAAGATTTCAAGCAGATGTTGAGTGAACATGCAGATTTCAAGGCACTTGCTGTAAAAGAAATTCACGCAGCGTCTGATGGAACTAGGAAGGTTGAAATTATCCTTCTCTATTTTGTTTCAAATTCTTATGATACACTTTGCATCTATTAGTTCATCTAGTAATACACGCAACCTTGGAGGTTACTTGATGACATTTATATTTTGGTTTTTAGCTTCAAGATTACTTGCATTTCTTGCTTATATTTTTTTAATTTCGTTTCTAGAAAGTCTTTTTGTTGACTGTTTAAACTCACAGAATATTGCAGATTTTATTCACACTGGATGATGGGCTGGTCATAGAAACAGTTGTCATACCTTGTGATACAGGCAGGACTACTGTGTGTGTTTCCAGTCAAGTTGGATGTGCCATGAATTGTCAATTTTGCTATACAGGAAGGCAAGCCTTTTTTCTGTCTATAATGATCGATTCAGTGGCTACACCGTCTTTACTTTTATTGCATGTTTTTCATTCAATGTAATTTTGCAGAATGGGTCTCAAGAGACATCTTACTGCCGCAGAAATAGTTGAGCAGGCTGTTTTTGCTAGACGGTTGTTCACAAGTGAAATTGGTTCCATCACCAATGTTGTATTTATGGTAGGTCAACAATTGCACTCAAAATTCTCAAGCTTACTGTATATCAAGTTCTACTTTATTCCTAGCAAATAAGATGCCACTTCTGTTTATAAGGATGAAAATAGGCCAGACAGCCTGATGTTGCGCACATTAGGCTTAGGCTAGGAGAAACTTATTTAATTGATAAACTTGGTTAAGAATAATTCTTCAAAAGCATATTTCGCTGAAAAGGCTAGGCTTTGGTCATTCAAAACTTTTAGGTGTGATAGACCGATTAAGGCTTAATAAATTGTCATGTGTGCTAGAGATGGGGAGGGGAAGATAATGATAAAATTGAACTGCAGGTGTGGTGTTTTATTGAATGTTGATTAGAACATGTACAAGAGGATTTTCATAATTTTATTGTATATTATATATGTGTACGTATTTTATTGTAGATATAAACAATAGATATAATCAACACTTTTCTCCTTTACATTGCATTGGAGGAAAATTCCTTCTTATTGATCGCAAGCTAATAGTTGCTATACATTTATTATAGGGCATGGGGGAACCTCTTCATAACATTGATAATGTCATTAAAGCTGCAGATATTATGGTGCATGACCAAGGGCTTCATTTCAGCCCCCGCAAGGTCACTGTTTCAACCAGTGGGCTTGTTCCGCAGCTCAGACGTTTCCTTCATGAATCCAACTGTACACTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTAAAAATTATTTCTTTATTGCTATTTGTTGGTAGAGATCCATAGAAGTAGTCACGAAAAGCCAAGAGCAATAATAGACAGAGGATTGATCACACTGACATCTATTATGTTAGGTAAGAAACTGGATCATGCCTATAAATCGAAAGTATAAACTGGACTTGCTTCTTGAGACACTTCGTGAGGAGCTTTCCTTCAAACACAAATATAAGGTTCTATTTGAGTATGTGATGCTTGAAGGAATTAATGACAGGTTAGGAAAACTTCTTTCACTTTATTGCTTGAGTTGGAATTTGCATAAATGATTTTACAGTTTTTTCCTGTCTTTTGTCATGTTTCCAAAGATAAGGTTATGTTTCAGTTGAGGACTGCATACTTTTCCATGCAAAATTTACAAAAAGGAATGTATGAGCTGGGCCATATATACATAATACCTATAATAATCTTTATCTTGTCCACAAATGACTTTGTAGAGTAGCAAAGTGTCATTATGTGCATAAATTGCCTGAACAGTTATAGGAGTTTGAGTTGGAATAATGCAAGAATTTGAGTAGGGGATGTTTGCAGAGTTTATTAAGAGCTTATTTGAGGTATTGAACTTATCTCATGACAAACAATTGCGTAAATGTTGAAAATTGGGTTTTTGTCATCAAAATTGGAGTGGTGTAGGAACAAAAAGGTGTAAGAGTTGTTTGCGCAAACTACTTAATGAAGAAGATTAACACTTGATAGGAGGATTAAATTTGTACTTTCTACCTAAGAATTCAAGATTAGAGGTAATGGAATTGTTGAAAAAGATGGCTGATGGTAATATATAGTTGGACTAGGTAATATACCAATTGAGATATGGAGGGGATTGCAAGAAAAAGCAGTTTTATAAATCCCAGATAGTGGAGCATAAAGGCCGAGCGATGACTGCTATTGTGAAACTTTTAGAGTTTATATGCTCCCTCCGGTCTCAAATATACGCTAGTAAGCTGCAAACAAGTTATGTTTGTTGGTCTTAAATATAAGCAAAATTTATCTACTTCTATCATATTTAATGTTATTATTCTCTAATTACCCTTCAACTGATTTAGATTTAATTTTGTAATAACCCTTTTACTCTCATGGAACAAGTTCCCATAAGGGGTAATTCAGAAAATACGATTACATGTTTATTACTTTTAGAATAAAAAATGAGACAAACTACTGTTCTTAATGGGTGTGAAAGTAGTTACTTTTGCTTATATATGAGACCGGAGGGAGTAATTTATATTACATAGATAAAAACTCAACTAGATCTGGGACTTACTAGTGAGAGGATGAAACATGTTTTCACCACAAAAAGTCAACCGGTGGATTTGTTCATGGCTAGATGGACACTGCCAAAAGATCCAAATCCAACCATTTTACCCTTCATCCATTCACTCCCTTTTATTATTCAACACATTTTCTTCTCCTTTTCCTTCCCTTCCACCGCTGATTAGCATGAGTGAGACAGTGAGAGTATTAGTCCCAACGCTGTTATGATTTATTTTAGTTTCAAAATACCTAAAATACTCCAATAAAAGAGGCCTTATGTTTAAATTGAGGAATTTTTTTATTTTTATTTTCAATCTCATAATGAGGTATTGCACTGTATTAGCAGCAACAACCACTTGTTTGGCCTCTATCTCATCAGCTATGACCACTGCATTGAACTGCTCTTGTACTGCATGTCCTCTAGCTTCCAGGGGCTGCTCCGCTACACTGCTATAGCTAGCATGCTATTGACAAGAATGGGAAAAGGTATAATATCGCTCGCAGTTATTCGGCGAGATTACAAAATATAAGAGAATGACAAATGAGTGGATGAGTACATAAATCCCCGTCTATAAGAACAAGGATGCCATGTAAAAAGACTGTGTAAGCGCAATTGAGCAGAGATTAAGACAAAAGACTTGCATCATAAATTTTAGTTTTATGCCGAGAGCAACCATGATAAAGGAAAAACAGGTAGTTTGAAAAAGACATACAATTGGGTTCTGAAAGAGGTTTTATCGTAGGCTCCGGAGAGATAAAAAATTGCTTAATTTGAGCAAGCAAATATATGAACAAGGGGGTCACGACTAGTGTGAGGACACGGTGAGGATGTAGAAGATTTTTCTAAAAGCCCTTTTATTTTATCTTGATTCTGGATGTGCTTACTGCAAATATTGTAGATATGATGTCACAAAAAATATTTGTGTCTGGATGATATATTGGTATTTGGAGAATCGAAAGGAGAAATAAAGAAGTTAGAGATAGGGGGGAAAGCCGTGAAAGCATATGACTTTCTTTTGAGTGAAGTGTAGTGTGTATATATAATATAAGTTTAGAGGTTAAAATTTGAAAACATACCAGTTCTAGACCAGTTTCAGAGCTCTCCAGAGCCCAAAATACGCAGTGGTTTTTTATCTACAAAACCAGTCCCCGCCTAGTGAAAAAGGCTTTCCTTATTGTAGTTCATACCATAATGTTTGCAATTCTTTCTATGCTCTATCTATGATACATTCCATGTCATAAGACTTGGATGCTGTCGTTGATGTATGCACTCTTATTTTGTGTAAAAATAAGTTTTTTCGTCTATATGCAGCAATGAAGATGCAAAGAGGCTAATCGAGCTTGTAAAGGGCATCCCTTGCAAGATTAATCTAATCTCATTCAATCCACATAGTGGATCTTTCTTCAGACCAACCAAAGAGGAAAGGATGATTGAATTCCGAAATATGCTAGCTGAGGCAGGATGTGTAGTCCTTTTAAGACCGAGTAGAGGCGATGATCAGATGGCTGCATGTGGTCAGTTAGGCAAGCCCGGCACCATTCAAGCTCCGATGCTCCGTGTACCTCAGCAATTCAAAATGGTGGTTGGAAGTTCAACGTGTTCTTTATAA

Protein sequence

>MS.gene69694.t1

MSMATSAFANSSSTTFLLHKTIIPFSLTKTSPFLISLTTPSRRFLSASSLPSISADHTFNFSHSGDGNSVAVSSRGSKVLLKGMTYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKQMLSEHADFKALAVKEIHAASDGTRKILFTLDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTSEIGSITNVVFMGMGEPLHNIDNVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCTLAVSLNATTDEVRNWIMPINRKYKLDLLLETLREELSFKHKYKVLFEYVMLEGINDSNEDAKRLIELVKGIPCKINLISFNPHSGSFFRPTKEERMIEFRNMLAEAGCVVLLRPSRGDDQMAACGQLGKPGTIQAPMLRVPQQFKMVVGSSTCSL