Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39990.t1 | XP_003590649.1 | 95 | 401 | 20 | 0 | 1 | 401 | 1 | 401 | 1.50E-213 | 751.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39990.t1 | Q9LYA9 | 81.7 | 345 | 63 | 0 | 55 | 399 | 60 | 404 | 3.3e-164 | 579.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39990.t1 | G7IED1 | 95.0 | 401 | 20 | 0 | 1 | 401 | 1 | 401 | 1.1e-213 | 751.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene39990 | 0.893233 | 7.61E-75 | -1.69E-46 |
| MS.gene049173 | MS.gene39990 | 0.850485 | 1.65E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene39990 | 0.876766 | 1.08E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene39990 | 0.91036 | 2.04E-82 | -1.69E-46 |
| MS.gene049232 | MS.gene39990 | 0.865808 | 4.51E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene39990 | 0.925556 | 1.56E-90 | -1.69E-46 |
| MS.gene049320 | MS.gene39990 | 0.929688 | 4.85E-93 | -1.69E-46 |
| MS.gene049369 | MS.gene39990 | 0.80814 | 3.59E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene39990 | 0.810187 | 1.31E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene39990 | 0.80128 | 9.70E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene39990 | 0.893734 | 4.77E-75 | -1.69E-46 |
| MS.gene049615 | MS.gene39990 | 0.829105 | 6.20E-55 | -1.69E-46 |
| MS.gene049627 | MS.gene39990 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene39990 | 0.862142 | 6.25E-64 | -1.69E-46 |
| MS.gene049634 | MS.gene39990 | -0.810435 | 1.15E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene39990 | 0.830042 | 3.67E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene39990 | 0.907922 | 3.00E-81 | -1.69E-46 |
| MS.gene050163 | MS.gene39990 | 0.891114 | 5.34E-74 | -1.69E-46 |
| MS.gene050165 | MS.gene39990 | 0.890721 | 7.63E-74 | -1.69E-46 |
| MS.gene050170 | MS.gene39990 | 0.834205 | 3.43E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene39990 | 0.861372 | 1.07E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene39990 | 0.867307 | 1.51E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene39990 | 0.891225 | 4.83E-74 | -1.69E-46 |
| MS.gene050381 | MS.gene39990 | -0.808657 | 2.78E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene39990 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene050444 | MS.gene39990 | 0.832413 | 9.59E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene39990 | 0.87635 | 1.50E-68 | -1.69E-46 |
| MS.gene050502 | MS.gene39990 | 0.822485 | 2.31E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene39990 | 0.905287 | 5.03E-80 | -1.69E-46 |
| MS.gene050518 | MS.gene39990 | 0.907824 | 3.34E-81 | -1.69E-46 |
| MS.gene050520 | MS.gene39990 | 0.829362 | 5.37E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene39990 | 0.86843 | 6.57E-66 | -1.69E-46 |
| MS.gene050577 | MS.gene39990 | 0.839406 | 1.62E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene39990 | 0.876519 | 1.31E-68 | -1.69E-46 |
| MS.gene050612 | MS.gene39990 | 0.925219 | 2.47E-90 | -1.69E-46 |
| MS.gene050662 | MS.gene39990 | 0.84965 | 2.82E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene39990 | 0.910206 | 2.43E-82 | -1.69E-46 |
| MS.gene050686 | MS.gene39990 | 0.835561 | 1.56E-56 | -1.69E-46 |
| MS.gene050690 | MS.gene39990 | 0.800148 | 1.65E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene39990 | 0.903402 | 3.60E-79 | -1.69E-46 |
| MS.gene050747 | MS.gene39990 | 0.863204 | 2.94E-64 | -1.69E-46 |
| MS.gene050767 | MS.gene39990 | 0.81903 | 1.44E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene39990 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene39990 | 0.933706 | 1.25E-95 | -1.69E-46 |
| MS.gene05079 | MS.gene39990 | -0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene39990 | 0.889752 | 1.83E-73 | -1.69E-46 |
| MS.gene05081 | MS.gene39990 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene39990 | 0.868632 | 5.65E-66 | -1.69E-46 |
| MS.gene050871 | MS.gene39990 | 0.865944 | 4.09E-65 | -1.69E-46 |
| MS.gene050876 | MS.gene39990 | 0.841098 | 5.84E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene39990 | 0.818326 | 2.08E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene39990 | 0.864567 | 1.11E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene39990 | 0.903612 | 2.90E-79 | -1.69E-46 |
| MS.gene05100 | MS.gene39990 | 0.859475 | 4.03E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene39990 | 0.826699 | 2.35E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene39990 | -0.818456 | 1.94E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene39990 | 0.884005 | 2.77E-71 | -1.69E-46 |
| MS.gene051268 | MS.gene39990 | 0.855537 | 5.90E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene39990 | 0.856433 | 3.23E-62 | -1.69E-46 |
| MS.gene051387 | MS.gene39990 | 0.820711 | 5.94E-53 | -1.69E-46 |
| MS.gene051434 | MS.gene39990 | 0.829056 | 6.37E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene39990 | 0.874869 | 4.82E-68 | -1.69E-46 |
| MS.gene051617 | MS.gene39990 | 0.843065 | 1.76E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene39990 | 0.850758 | 1.38E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene39990 | 0.82132 | 4.30E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene39990 | 0.814036 | 1.89E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene39990 | 0.904067 | 1.81E-79 | -1.69E-46 |
| MS.gene051838 | MS.gene39990 | 0.833356 | 5.59E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene39990 | 0.865128 | 7.39E-65 | -1.69E-46 |
| MS.gene051874 | MS.gene39990 | 0.823765 | 1.16E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene39990 | 0.884158 | 2.44E-71 | -1.69E-46 |
| MS.gene052164 | MS.gene39990 | 0.851265 | 9.93E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene39990 | 0.8664 | 2.93E-65 | -1.69E-46 |
| MS.gene052379 | MS.gene39990 | 0.850813 | 1.33E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene39990 | 0.847534 | 1.09E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene39990 | 0.814378 | 1.59E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene39990 | 0.850311 | 1.84E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene39990 | 0.833519 | 5.09E-56 | -1.69E-46 |
| MS.gene052504 | MS.gene39990 | 0.837565 | 4.82E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene39990 | 0.863303 | 2.74E-64 | -1.69E-46 |
| MS.gene052510 | MS.gene39990 | 0.814494 | 1.50E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene39990 | 0.846912 | 1.61E-59 | -1.69E-46 |
| MS.gene052670 | MS.gene39990 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene052820 | MS.gene39990 | 0.814253 | 1.69E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene39990 | 0.87925 | 1.45E-69 | -1.69E-46 |
| MS.gene052823 | MS.gene39990 | 0.822845 | 1.91E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene39990 | 0.818586 | 1.81E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene39990 | 0.86375 | 1.99E-64 | -1.69E-46 |
| MS.gene052872 | MS.gene39990 | 0.871433 | 6.86E-67 | -1.69E-46 |
| MS.gene052916 | MS.gene39990 | 0.875519 | 2.89E-68 | -1.69E-46 |
| MS.gene052966 | MS.gene39990 | 0.871352 | 7.30E-67 | -1.69E-46 |
| MS.gene053009 | MS.gene39990 | 0.842603 | 2.34E-58 | -1.69E-46 |
| MS.gene053018 | MS.gene39990 | 0.815781 | 7.75E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene39990 | 0.873 | 2.06E-67 | -1.69E-46 |
| MS.gene053107 | MS.gene39990 | 0.826465 | 2.67E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene39990 | 0.868802 | 4.98E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene39990 | 0.889752 | 1.83E-73 | -1.69E-46 |
| MS.gene053213 | MS.gene39990 | 0.911269 | 7.36E-83 | -1.69E-46 |
| MS.gene053286 | MS.gene39990 | 0.911263 | 7.41E-83 | -1.69E-46 |
| MS.gene053322 | MS.gene39990 | 0.833467 | 5.25E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene39990 | -0.82702 | 1.97E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene39990 | 0.852418 | 4.68E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene39990 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene39990 | 0.861938 | 7.22E-64 | -1.69E-46 |
| MS.gene053480 | MS.gene39990 | 0.802764 | 4.81E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene39990 | -0.838627 | 2.57E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene39990 | 0.898725 | 4.00E-77 | -1.69E-46 |
| MS.gene053626 | MS.gene39990 | 0.826746 | 2.29E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene39990 | 0.871824 | 5.09E-67 | -1.69E-46 |
| MS.gene053824 | MS.gene39990 | 0.875657 | 2.59E-68 | -1.69E-46 |
| MS.gene053916 | MS.gene39990 | 0.895252 | 1.14E-75 | -1.69E-46 |
| MS.gene054003 | MS.gene39990 | 0.816459 | 5.47E-52 | -1.69E-46 |
| MS.gene054374 | MS.gene39990 | 0.813278 | 2.78E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene39990 | 0.821048 | 4.97E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene39990 | 0.863447 | 2.47E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene39990 | 0.90918 | 7.58E-82 | -1.69E-46 |
| MS.gene054616 | MS.gene39990 | -0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene39990 | 0.935493 | 7.78E-97 | -1.69E-46 |
| MS.gene054706 | MS.gene39990 | -0.818797 | 1.62E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene39990 | 0.832505 | 9.10E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene39990 | 0.81822 | 2.20E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene39990 | 0.825693 | 4.08E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene39990 | 0.914549 | 1.68E-84 | -1.69E-46 |
| MS.gene05505 | MS.gene39990 | 0.855818 | 4.89E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene39990 | -0.841472 | 4.65E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene39990 | 0.878476 | 2.72E-69 | -1.69E-46 |
| MS.gene055212 | MS.gene39990 | 0.862083 | 6.51E-64 | -1.69E-46 |
| MS.gene055224 | MS.gene39990 | 0.859005 | 5.58E-63 | -1.69E-46 |
| MS.gene055289 | MS.gene39990 | 0.845331 | 4.34E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene39990 | 0.92017 | 1.80E-87 | -1.69E-46 |
| MS.gene055397 | MS.gene39990 | 0.82392 | 1.07E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene39990 | 0.823848 | 1.11E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene39990 | 0.899365 | 2.13E-77 | -1.69E-46 |
| MS.gene055577 | MS.gene39990 | 0.91895 | 8.27E-87 | -1.69E-46 |
| MS.gene055620 | MS.gene39990 | 0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene055634 | MS.gene39990 | 0.824055 | 9.93E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene39990 | 0.847881 | 8.73E-60 | -1.69E-46 |
| MS.gene055638 | MS.gene39990 | 0.85876 | 6.60E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene39990 | 0.846558 | 2.01E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene39990 | 0.907057 | 7.65E-81 | -1.69E-46 |
| MS.gene055748 | MS.gene39990 | 0.883109 | 5.92E-71 | -1.69E-46 |
| MS.gene055750 | MS.gene39990 | 0.881638 | 2.03E-70 | -1.69E-46 |
| MS.gene055751 | MS.gene39990 | 0.890511 | 9.22E-74 | -1.69E-46 |
| MS.gene055776 | MS.gene39990 | 0.8797 | 1.01E-69 | -1.69E-46 |
| MS.gene055849 | MS.gene39990 | 0.809773 | 1.60E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene39990 | 0.845268 | 4.51E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene39990 | 0.907967 | 2.86E-81 | -1.69E-46 |
| MS.gene055941 | MS.gene39990 | 0.8786 | 2.46E-69 | -1.69E-46 |
| MS.gene055942 | MS.gene39990 | -0.816646 | 4.97E-52 | -1.69E-46 |
| MS.gene055956 | MS.gene39990 | -0.839868 | 1.22E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene39990 | 0.818617 | 1.79E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene39990 | 0.84793 | 8.47E-60 | -1.69E-46 |
| MS.gene056359 | MS.gene39990 | -0.804924 | 1.71E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene39990 | 0.89789 | 9.06E-77 | -1.69E-46 |
| MS.gene056409 | MS.gene39990 | 0.808908 | 2.46E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene39990 | 0.826413 | 2.75E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene39990 | 0.819553 | 1.09E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene39990 | 0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene39990 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene39990 | 0.838151 | 3.41E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene39990 | 0.891351 | 4.30E-74 | -1.69E-46 |
| MS.gene056510 | MS.gene39990 | 0.893875 | 4.18E-75 | -1.69E-46 |
| MS.gene056549 | MS.gene39990 | 0.805927 | 1.05E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene39990 | -0.800521 | 1.39E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene39990 | 0.807844 | 4.14E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene39990 | 0.932047 | 1.53E-94 | -1.69E-46 |
| MS.gene05666 | MS.gene39990 | 0.806581 | 7.67E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene39990 | 0.863467 | 2.44E-64 | -1.69E-46 |
| MS.gene056897 | MS.gene39990 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene39990 | 0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene056947 | MS.gene39990 | 0.877329 | 6.86E-69 | -1.69E-46 |
| MS.gene057076 | MS.gene39990 | 0.872373 | 3.34E-67 | -1.69E-46 |
| MS.gene057086 | MS.gene39990 | 0.810786 | 9.69E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene39990 | 0.862601 | 4.51E-64 | -1.69E-46 |
| MS.gene057246 | MS.gene39990 | 0.809362 | 1.96E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene39990 | 0.932783 | 5.06E-95 | -1.69E-46 |
| MS.gene057332 | MS.gene39990 | 0.804939 | 1.70E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene39990 | 0.887718 | 1.12E-72 | -1.69E-46 |
| MS.gene057658 | MS.gene39990 | 0.838545 | 2.70E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene39990 | 0.818257 | 2.15E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene39990 | 0.855005 | 8.43E-62 | -1.69E-46 |
| MS.gene057857 | MS.gene39990 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene39990 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene39990 | 0.875779 | 2.36E-68 | -1.69E-46 |
| MS.gene058006 | MS.gene39990 | 0.80483 | 1.79E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene39990 | 0.844575 | 6.95E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene39990 | 0.840957 | 6.36E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene39990 | 0.861006 | 1.39E-63 | -1.69E-46 |
| MS.gene058334 | MS.gene39990 | -0.803567 | 3.28E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene39990 | 0.802432 | 5.63E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene39990 | 0.850421 | 1.72E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene39990 | 0.879455 | 1.23E-69 | -1.69E-46 |
| MS.gene058419 | MS.gene39990 | 0.917489 | 4.99E-86 | -1.69E-46 |
| MS.gene058544 | MS.gene39990 | 0.86252 | 4.78E-64 | -1.69E-46 |
| MS.gene058723 | MS.gene39990 | 0.911631 | 4.88E-83 | -1.69E-46 |
| MS.gene058773 | MS.gene39990 | 0.917584 | 4.44E-86 | -1.69E-46 |
| MS.gene058838 | MS.gene39990 | 0.859646 | 3.58E-63 | -1.69E-46 |
| MS.gene058840 | MS.gene39990 | -0.811205 | 7.86E-51 | -1.69E-46 |
| MS.gene058978 | MS.gene39990 | -0.828471 | 8.83E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene39990 | 0.908858 | 1.08E-81 | -1.69E-46 |
| MS.gene059023 | MS.gene39990 | 0.891503 | 3.74E-74 | -1.69E-46 |
| MS.gene059029 | MS.gene39990 | 0.883092 | 6.01E-71 | -1.69E-46 |
| MS.gene059079 | MS.gene39990 | 0.812718 | 3.68E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene39990 | 0.903751 | 2.51E-79 | -1.69E-46 |
| MS.gene059181 | MS.gene39990 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene059305 | MS.gene39990 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene39990 | 0.859832 | 3.15E-63 | -1.69E-46 |
| MS.gene059367 | MS.gene39990 | 0.844629 | 6.72E-59 | -1.69E-46 |
| MS.gene059536 | MS.gene39990 | 0.813619 | 2.33E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene39990 | 0.828375 | 9.31E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene39990 | 0.914733 | 1.35E-84 | -1.69E-46 |
| MS.gene059699 | MS.gene39990 | -0.802411 | 5.68E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene39990 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene39990 | 0.911081 | 9.10E-83 | -1.69E-46 |
| MS.gene059756 | MS.gene39990 | 0.847026 | 1.50E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene39990 | 0.83482 | 2.40E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene39990 | 0.903176 | 4.55E-79 | -1.69E-46 |
| MS.gene059902 | MS.gene39990 | 0.860741 | 1.67E-63 | -1.69E-46 |
| MS.gene059960 | MS.gene39990 | 0.854973 | 8.61E-62 | -1.69E-46 |
| MS.gene06000 | MS.gene39990 | 0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene39990 | 0.850227 | 1.95E-60 | -1.69E-46 |
| MS.gene060337 | MS.gene39990 | -0.806184 | 9.30E-50 | -1.69E-46 |
| MS.gene060341 | MS.gene39990 | 0.810406 | 1.17E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene39990 | 0.864019 | 1.64E-64 | -1.69E-46 |
| MS.gene060703 | MS.gene39990 | 0.881533 | 2.22E-70 | -1.69E-46 |
| MS.gene060728 | MS.gene39990 | 0.841027 | 6.10E-58 | -1.69E-46 |
| MS.gene060762 | MS.gene39990 | 0.874184 | 8.23E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene39990 | 0.834213 | 3.41E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene39990 | 0.875467 | 3.01E-68 | -1.69E-46 |
| MS.gene060804 | MS.gene39990 | 0.880643 | 4.64E-70 | -1.69E-46 |
| MS.gene060818 | MS.gene39990 | 0.828894 | 6.97E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene39990 | 0.876575 | 1.25E-68 | -1.69E-46 |
| MS.gene060837 | MS.gene39990 | 0.828802 | 7.34E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene39990 | 0.886896 | 2.29E-72 | -1.69E-46 |
| MS.gene060982 | MS.gene39990 | 0.889692 | 1.93E-73 | -1.69E-46 |
| MS.gene061041 | MS.gene39990 | 0.834303 | 3.24E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene39990 | 0.826304 | 2.92E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene39990 | 0.877085 | 8.34E-69 | -1.69E-46 |
| MS.gene061200 | MS.gene39990 | 0.861249 | 1.17E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39990.t1 | MTR_1g072260 | 98.254 | 401 | 7 | 0 | 1 | 401 | 1 | 401 | 0.0 | 808 |
| MS.gene39990.t1 | MTR_7g111860 | 35.561 | 374 | 216 | 9 | 36 | 392 | 6 | 371 | 1.47e-60 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39990.t1 | AT3G63140 | 81.739 | 345 | 63 | 0 | 55 | 399 | 60 | 404 | 0.0 | 594 |
| MS.gene39990.t1 | AT1G09340 | 35.244 | 349 | 212 | 6 | 51 | 392 | 30 | 371 | 3.05e-59 | 197 |
| MS.gene39990.t1 | AT1G09340 | 35.569 | 343 | 207 | 6 | 57 | 392 | 37 | 372 | 2.79e-58 | 195 |
Find 100 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCAATTCCAATAGCTTT+TGG | 0.225530 | 1.4:+59221229 | None:intergenic |
| TAGAGCAGCCAAAAGTAAAT+TGG | 0.234159 | 1.4:-59220814 | MS.gene39990:CDS |
| TACTTTGCAAAAGAGCTTCT+TGG | 0.252518 | 1.4:-59222635 | MS.gene39990:CDS |
| GGAAGCATTTGATGTGGTTT+TGG | 0.277672 | 1.4:-59222251 | MS.gene39990:CDS |
| TTGACAGTTGGGCAGTATTC+AGG | 0.282729 | 1.4:-59221660 | MS.gene39990:CDS |
| TTAACTGAGAATCTATTAAA+AGG | 0.304053 | 1.4:+59222548 | None:intergenic |
| TCATAATGCACAATATTAAC+AGG | 0.306642 | 1.4:+59221253 | None:intergenic |
| ACTCCATCCCAATTTACTTT+TGG | 0.315805 | 1.4:+59220806 | None:intergenic |
| TGCCATTTGTAGGGATTGTT+CGG | 0.321985 | 1.4:-59221468 | MS.gene39990:intron |
| GATCGTGCAGTGACTCTAAA+TGG | 0.323232 | 1.4:-59221310 | MS.gene39990:CDS |
| CATTATGATCCAAAAGCTAT+TGG | 0.327599 | 1.4:-59221238 | MS.gene39990:CDS |
| CTTGTAGGCCGGTGATTGAT+TGG | 0.337830 | 1.4:-59221915 | MS.gene39990:intron |
| GTGCTGGAGGCAGTACAGTA+TGG | 0.353532 | 1.4:-59222309 | MS.gene39990:CDS |
| TCATCTAGCTCAAATTTGAT+TGG | 0.372467 | 1.4:+59220711 | None:intergenic |
| GACAGACCTGTGCTAATTCC+TGG | 0.376564 | 1.4:-59221445 | MS.gene39990:CDS |
| TTTGAGGAGTACATAAAGAT+TGG | 0.382185 | 1.4:-59220747 | MS.gene39990:CDS |
| CACAGCATGTCCACCACTAT+TGG | 0.391544 | 1.4:+59222667 | None:intergenic |
| AGATTGATAGAGAGGAGGAT+TGG | 0.398549 | 1.4:+59222801 | None:intergenic |
| GCCATTTGTAGGGATTGTTC+GGG | 0.401187 | 1.4:-59221467 | MS.gene39990:intron |
| CCTGTGCTAATTCCTGGTTC+AGG | 0.406137 | 1.4:-59221439 | MS.gene39990:CDS |
| TTCAGGCCACAGTATATGAT+AGG | 0.407167 | 1.4:-59221643 | MS.gene39990:CDS |
| ATGCTATGATTTGCAGCATC+CGG | 0.413288 | 1.4:+59221349 | None:intergenic |
| TAAAGAAGGGTGTGATAGAA+AGG | 0.420821 | 1.4:+59222772 | None:intergenic |
| GCAAAAGAGCTTCTTGGTGC+TGG | 0.422594 | 1.4:-59222629 | MS.gene39990:CDS |
| ATGTGAAAGTGGGAGGAGAT+TGG | 0.423665 | 1.4:+59222859 | None:intergenic |
| GGTAGAGGAGATTGATAGAG+AGG | 0.430909 | 1.4:+59222793 | None:intergenic |
| TTGCTTAGCACCAGCACTCT+TGG | 0.432659 | 1.4:+59221891 | None:intergenic |
| TTCTTGTTCATCAGTAGTGC+TGG | 0.442792 | 1.4:-59221868 | MS.gene39990:CDS |
| CCACAGTATATGATAGGGTC+TGG | 0.453744 | 1.4:-59221637 | MS.gene39990:CDS |
| TTGTAGGCCGGTGATTGATT+GGG | 0.458275 | 1.4:-59221914 | MS.gene39990:intron |
| TGCTGGAGGCAGTACAGTAT+GGG | 0.461255 | 1.4:-59222308 | MS.gene39990:CDS |
| GACAGGCACTGGAACTTTCA+AGG | 0.461589 | 1.4:+59220674 | None:intergenic |
| AGAGCAGCCAAAAGTAAATT+GGG | 0.463206 | 1.4:-59220813 | MS.gene39990:CDS |
| GCAGATGTAGGGAGTGTTGT+AGG | 0.465644 | 1.4:-59222277 | MS.gene39990:CDS |
| AAACGTTTAGAAGTTAAAGA+AGG | 0.468448 | 1.4:+59222758 | None:intergenic |
| AGGGTGTGATAGAAAGGTAG+AGG | 0.470337 | 1.4:+59222778 | None:intergenic |
| TTGAGGAGTACATAAAGATT+GGG | 0.473490 | 1.4:-59220746 | MS.gene39990:CDS |
| TTCATCACCAACAGTGAGAA+TGG | 0.478740 | 1.4:+59222595 | None:intergenic |
| ATTCAGGAAATTGTGAGTGC+TGG | 0.482366 | 1.4:-59222325 | MS.gene39990:intron |
| TGTAGGGAGTGTTGTAGGAG+GGG | 0.485069 | 1.4:-59222272 | MS.gene39990:CDS |
| AAACTATGCGCTCAAGCTGC+AGG | 0.488216 | 1.4:-59221280 | MS.gene39990:CDS |
| TTTACATACCCCTTCAACAT+GGG | 0.493986 | 1.4:+59221819 | None:intergenic |
| TGCTATGATTTGCAGCATCC+GGG | 0.495889 | 1.4:+59221350 | None:intergenic |
| TAGGTCTTCAGGTAGGTTTG+TGG | 0.496981 | 1.4:+59220779 | None:intergenic |
| GATGAACCTCCCCATGTTGA+AGG | 0.498721 | 1.4:-59221829 | MS.gene39990:CDS |
| CTAATCATAAATACCAATAG+TGG | 0.505445 | 1.4:-59222680 | MS.gene39990:CDS |
| ATTGATTGGGCCAAGAGTGC+TGG | 0.505534 | 1.4:-59221901 | MS.gene39990:CDS |
| TATTAGTAACTACCACATTA+CGG | 0.509809 | 1.4:+59221188 | None:intergenic |
| TGGGGAAATCCTGCAGATGT+AGG | 0.509975 | 1.4:-59222289 | MS.gene39990:CDS |
| TGGACATGAATGGATTAGAC+AGG | 0.510269 | 1.4:+59220657 | None:intergenic |
| AAGTGGGAGGAGATTGGAAG+AGG | 0.510845 | 1.4:+59222865 | None:intergenic |
| ATGTAGGGAGTGTTGTAGGA+GGG | 0.512919 | 1.4:-59222273 | MS.gene39990:CDS |
| GACTCTAGCTGTTGAGAACC+CGG | 0.519383 | 1.4:-59221368 | MS.gene39990:CDS |
| TAACTACCACATTACGGAAA+GGG | 0.523101 | 1.4:+59221194 | None:intergenic |
| AAAGTTGAAGAATGTGAAAG+TGG | 0.526768 | 1.4:+59222848 | None:intergenic |
| TGAATGGATTAGACAGGCAC+TGG | 0.530414 | 1.4:+59220663 | None:intergenic |
| AGTGGTGGACATGCTGTGAT+TGG | 0.532273 | 1.4:-59222662 | MS.gene39990:CDS |
| GATGTAGGGAGTGTTGTAGG+AGG | 0.533905 | 1.4:-59222274 | MS.gene39990:CDS |
| AGAGGAGATTGATAGAGAGG+AGG | 0.537025 | 1.4:+59222796 | None:intergenic |
| AGCCTTCCCTTTCCGTAATG+TGG | 0.539160 | 1.4:-59221200 | MS.gene39990:intron |
| AGACCTAAAAGAACGGTTTG+AGG | 0.542890 | 1.4:-59220763 | MS.gene39990:CDS |
| TCTGTCACCATTCTCACTGT+TGG | 0.546638 | 1.4:-59222602 | MS.gene39990:CDS |
| ACAACACTCCCTACATCTGC+AGG | 0.549124 | 1.4:+59222280 | None:intergenic |
| ATGAACCTCCCCATGTTGAA+GGG | 0.549367 | 1.4:-59221828 | MS.gene39990:CDS |
| GATGCTGTCAAAGCAGATGC+TGG | 0.549933 | 1.4:-59221718 | MS.gene39990:CDS |
| AGGTGAAGAGGAAGCAAGCA+TGG | 0.550927 | 1.4:+59222907 | None:intergenic |
| GTTGCAGTGAAGAGCAAGGT+AGG | 0.557688 | 1.4:+59222887 | None:intergenic |
| GGGGAAATCCTGCAGATGTA+GGG | 0.557910 | 1.4:-59222288 | MS.gene39990:CDS |
| AACGTTTAGAAGTTAAAGAA+GGG | 0.558877 | 1.4:+59222759 | None:intergenic |
| GAAGAGCAAGGTAGGTGAAG+AGG | 0.559392 | 1.4:+59222895 | None:intergenic |
| ATCATAAATACCAATAGTGG+TGG | 0.568756 | 1.4:-59222677 | MS.gene39990:CDS |
| CAGGAAATTGTGAGTGCTGG+AGG | 0.569688 | 1.4:-59222322 | MS.gene39990:CDS |
| CAACAATGGCAAGGATCTTG+AGG | 0.570058 | 1.4:-59222227 | MS.gene39990:CDS |
| AAAGCAGATGCTGGTCATGT+TGG | 0.578448 | 1.4:-59221709 | MS.gene39990:CDS |
| AAGTGCTGCAGAGAAGAAGA+AGG | 0.579004 | 1.4:-59222705 | MS.gene39990:CDS |
| ACTGAGAATCTATTAAAAGG+AGG | 0.579316 | 1.4:+59222551 | None:intergenic |
| GTGAGTTGCAATCCTGAACC+AGG | 0.583215 | 1.4:+59221427 | None:intergenic |
| TTGAAGAATGTGAAAGTGGG+AGG | 0.586781 | 1.4:+59222852 | None:intergenic |
| TGAAGACAAGTCTTTAACAT+GGG | 0.589247 | 1.4:+59221396 | None:intergenic |
| CAGCCAAAAGTAAATTGGGA+TGG | 0.590712 | 1.4:-59220809 | MS.gene39990:CDS |
| AGGAGGGGAAGCATTTGATG+TGG | 0.594670 | 1.4:-59222257 | MS.gene39990:CDS |
| TTACATACCCCTTCAACATG+GGG | 0.600415 | 1.4:+59221820 | None:intergenic |
| CTCTTGGCCCAATCAATCAC+CGG | 0.609443 | 1.4:+59221907 | None:intergenic |
| TCAGGCCACAGTATATGATA+GGG | 0.612425 | 1.4:-59221642 | MS.gene39990:CDS |
| GTAACTACCACATTACGGAA+AGG | 0.618845 | 1.4:+59221193 | None:intergenic |
| CCTGAACCAGGAATTAGCAC+AGG | 0.620301 | 1.4:+59221439 | None:intergenic |
| CATACCCCTTCAACATGGGG+AGG | 0.623130 | 1.4:+59221823 | None:intergenic |
| ACAACAAAGATTGCGAGGAG+TGG | 0.624292 | 1.4:-59221612 | MS.gene39990:CDS |
| AGAGGTTGCAGTGAAGAGCA+AGG | 0.629204 | 1.4:+59222883 | None:intergenic |
| TGAACCTCCCCATGTTGAAG+GGG | 0.630399 | 1.4:-59221827 | MS.gene39990:intron |
| TTGAAGACAAGTCTTTAACA+TGG | 0.635676 | 1.4:+59221395 | None:intergenic |
| AAGTTGAAGAATGTGAAAGT+GGG | 0.645935 | 1.4:+59222849 | None:intergenic |
| TACCTGAAGACCTAAAAGAA+CGG | 0.651559 | 1.4:-59220770 | MS.gene39990:CDS |
| GCAAGGATCTTGAGGCTGTG+AGG | 0.652778 | 1.4:-59222219 | MS.gene39990:intron |
| GCTGGAGGCAGTACAGTATG+GGG | 0.653422 | 1.4:-59222307 | MS.gene39990:CDS |
| TGGAAACAACAAAGATTGCG+AGG | 0.654997 | 1.4:-59221617 | MS.gene39990:CDS |
| GCTAGATGATAAGATACTAG+AGG | 0.656094 | 1.4:-59220697 | MS.gene39990:CDS |
| CATAATGCACAATATTAACA+GGG | 0.661428 | 1.4:+59221254 | None:intergenic |
| TACCACATTACGGAAAGGGA+AGG | 0.661601 | 1.4:+59221198 | None:intergenic |
| CCAGACCCTATCATATACTG+TGG | 0.716866 | 1.4:+59221637 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGAATTTGAAAAATATTC+AGG | - | chr1.4:59221241-59221260 | MS.gene39990:CDS | 20.0% |
| !! | TTAACTGAGAATCTATTAAA+AGG | + | chr1.4:59221037-59221056 | None:intergenic | 20.0% |
| ! | AAACGTTTAGAAGTTAAAGA+AGG | + | chr1.4:59220827-59220846 | None:intergenic | 25.0% |
| ! | AACGTTTAGAAGTTAAAGAA+GGG | + | chr1.4:59220826-59220845 | None:intergenic | 25.0% |
| ! | AATAACTGTTATCAGCAAAA+TGG | + | chr1.4:59221814-59221833 | None:intergenic | 25.0% |
| ! | AATCTAAAGATGAAAATCAC+TGG | - | chr1.4:59221836-59221855 | MS.gene39990:CDS | 25.0% |
| ! | CAATCATCGTTATTATATCA+AGG | - | chr1.4:59221207-59221226 | MS.gene39990:CDS | 25.0% |
| ! | CATAATGCACAATATTAACA+GGG | + | chr1.4:59222331-59222350 | None:intergenic | 25.0% |
| ! | CTAATCATAAATACCAATAG+TGG | - | chr1.4:59220902-59220921 | MS.gene39990:intron | 25.0% |
| ! | GAGTAAAAAAAAGCTTCATA+TGG | + | chr1.4:59222048-59222067 | None:intergenic | 25.0% |
| ! | TACAAGTTAAGATCAAGATT+AGG | + | chr1.4:59221653-59221672 | None:intergenic | 25.0% |
| ! | TATTAGTAACTACCACATTA+CGG | + | chr1.4:59222397-59222416 | None:intergenic | 25.0% |
| ! | TCATAATGCACAATATTAAC+AGG | + | chr1.4:59222332-59222351 | None:intergenic | 25.0% |
| ! | TGTATCATAGATTAGAACAT+AGG | + | chr1.4:59222421-59222440 | None:intergenic | 25.0% |
| !! | AAAAGCTTCATATGGATTAA+AGG | + | chr1.4:59222040-59222059 | None:intergenic | 25.0% |
| !! | AAATGTATATTGCCATTTGT+AGG | - | chr1.4:59222104-59222123 | MS.gene39990:intron | 25.0% |
| !! | AATGTATATTGCCATTTGTA+GGG | - | chr1.4:59222105-59222124 | MS.gene39990:intron | 25.0% |
| !!! | TAATCTTGATCTTAACTTGT+AGG | - | chr1.4:59221652-59221671 | MS.gene39990:CDS | 25.0% |
| AAAGTTGAAGAATGTGAAAG+TGG | + | chr1.4:59220737-59220756 | None:intergenic | 30.0% | |
| AAGTTGAAGAATGTGAAAGT+GGG | + | chr1.4:59220736-59220755 | None:intergenic | 30.0% | |
| ACTGAGAATCTATTAAAAGG+AGG | + | chr1.4:59221034-59221053 | None:intergenic | 30.0% | |
| AGATAATCGATACTCTCTAT+TGG | + | chr1.4:59222470-59222489 | None:intergenic | 30.0% | |
| ATCATAAATACCAATAGTGG+TGG | - | chr1.4:59220905-59220924 | MS.gene39990:intron | 30.0% | |
| CATTATGATCCAAAAGCTAT+TGG | - | chr1.4:59222344-59222363 | MS.gene39990:intron | 30.0% | |
| TGAAGACAAGTCTTTAACAT+GGG | + | chr1.4:59222189-59222208 | None:intergenic | 30.0% | |
| TTGAAGACAAGTCTTTAACA+TGG | + | chr1.4:59222190-59222209 | None:intergenic | 30.0% | |
| ! | CTGTTACAGTTCAATACTTT+TGG | + | chr1.4:59222500-59222519 | None:intergenic | 30.0% |
| ! | TCATCTAGCTCAAATTTGAT+TGG | + | chr1.4:59222874-59222893 | None:intergenic | 30.0% |
| ! | TGAAGAAACTTTTGACAGTT+GGG | - | chr1.4:59221911-59221930 | MS.gene39990:CDS | 30.0% |
| ! | TTGAAGAAACTTTTGACAGT+TGG | - | chr1.4:59221910-59221929 | MS.gene39990:CDS | 30.0% |
| ! | TTGAGGAGTACATAAAGATT+GGG | - | chr1.4:59222836-59222855 | MS.gene39990:CDS | 30.0% |
| ! | TTTGAGGAGTACATAAAGAT+TGG | - | chr1.4:59222835-59222854 | MS.gene39990:CDS | 30.0% |
| !! | ATAGAGAGTATCGATTATCT+TGG | - | chr1.4:59222470-59222489 | MS.gene39990:intron | 30.0% |
| AACCTGTTGAGTTAACATGA+AGG | + | chr1.4:59221443-59221462 | None:intergenic | 35.0% | |
| AGAGCAGCCAAAAGTAAATT+GGG | - | chr1.4:59222769-59222788 | MS.gene39990:CDS | 35.0% | |
| ATCATTTATGTCTCAACCGA+GGG | - | chr1.4:59222639-59222658 | MS.gene39990:CDS | 35.0% | |
| CTATTCTAATATATGCAGCC+AGG | - | chr1.4:59221606-59221625 | MS.gene39990:CDS | 35.0% | |
| GCTAGATGATAAGATACTAG+AGG | - | chr1.4:59222885-59222904 | MS.gene39990:CDS | 35.0% | |
| GGTTCTTGAAATGCTGTATT+AGG | + | chr1.4:59221793-59221812 | None:intergenic | 35.0% | |
| TAACTACCACATTACGGAAA+GGG | + | chr1.4:59222391-59222410 | None:intergenic | 35.0% | |
| TACCTGAAGACCTAAAAGAA+CGG | - | chr1.4:59222812-59222831 | MS.gene39990:CDS | 35.0% | |
| TACTTTGCAAAAGAGCTTCT+TGG | - | chr1.4:59220947-59220966 | MS.gene39990:intron | 35.0% | |
| TAGAGCAGCCAAAAGTAAAT+TGG | - | chr1.4:59222768-59222787 | MS.gene39990:CDS | 35.0% | |
| TCTTTCTTAAAGACTGTACC+TGG | + | chr1.4:59221627-59221646 | None:intergenic | 35.0% | |
| TTTACATACCCCTTCAACAT+GGG | + | chr1.4:59221766-59221785 | None:intergenic | 35.0% | |
| ! | ACTCCATCCCAATTTACTTT+TGG | + | chr1.4:59222779-59222798 | None:intergenic | 35.0% |
| ! | GCATCAATTCCAATAGCTTT+TGG | + | chr1.4:59222356-59222375 | None:intergenic | 35.0% |
| ! | TAAAGAAGGGTGTGATAGAA+AGG | + | chr1.4:59220813-59220832 | None:intergenic | 35.0% |
| ! | TTTTACATACCCCTTCAACA+TGG | + | chr1.4:59221767-59221786 | None:intergenic | 35.0% |
| !! | AATTTACTTTTGGCTGCTCT+AGG | + | chr1.4:59222769-59222788 | None:intergenic | 35.0% |
| AAGATGAAAATCACTGGAGC+AGG | - | chr1.4:59221842-59221861 | MS.gene39990:CDS | 40.0% | |
| AGACCTAAAAGAACGGTTTG+AGG | - | chr1.4:59222819-59222838 | MS.gene39990:CDS | 40.0% | |
| AGATTGATAGAGAGGAGGAT+TGG | + | chr1.4:59220784-59220803 | None:intergenic | 40.0% | |
| AGCACTAGCTAAATGCAGAA+AGG | + | chr1.4:59221145-59221164 | None:intergenic | 40.0% | |
| AGTGGTTCTTTGACAGTAAG+TGG | - | chr1.4:59221988-59222007 | MS.gene39990:intron | 40.0% | |
| ATTCAGGAAATTGTGAGTGC+TGG | - | chr1.4:59221257-59221276 | MS.gene39990:CDS | 40.0% | |
| CAGCCAAAAGTAAATTGGGA+TGG | - | chr1.4:59222773-59222792 | MS.gene39990:CDS | 40.0% | |
| CATCATTTATGTCTCAACCG+AGG | - | chr1.4:59222638-59222657 | MS.gene39990:CDS | 40.0% | |
| GTAACTACCACATTACGGAA+AGG | + | chr1.4:59222392-59222411 | None:intergenic | 40.0% | |
| GTGGTTCTTTGACAGTAAGT+GGG | - | chr1.4:59221989-59222008 | MS.gene39990:intron | 40.0% | |
| TCAGGCCACAGTATATGATA+GGG | - | chr1.4:59221940-59221959 | MS.gene39990:intron | 40.0% | |
| TGCCTTCATGTTAACTCAAC+AGG | - | chr1.4:59221438-59221457 | MS.gene39990:CDS | 40.0% | |
| TGGAAACAACAAAGATTGCG+AGG | - | chr1.4:59221965-59221984 | MS.gene39990:intron | 40.0% | |
| TTACATACCCCTTCAACATG+GGG | + | chr1.4:59221765-59221784 | None:intergenic | 40.0% | |
| TTCAGGCCACAGTATATGAT+AGG | - | chr1.4:59221939-59221958 | MS.gene39990:intron | 40.0% | |
| TTCATCACCAACAGTGAGAA+TGG | + | chr1.4:59220990-59221009 | None:intergenic | 40.0% | |
| TTCTTGTTCATCAGTAGTGC+TGG | - | chr1.4:59221714-59221733 | MS.gene39990:CDS | 40.0% | |
| TTGAAGAATGTGAAAGTGGG+AGG | + | chr1.4:59220733-59220752 | None:intergenic | 40.0% | |
| ! | ACTCCTCAAACCGTTCTTTT+AGG | + | chr1.4:59222825-59222844 | None:intergenic | 40.0% |
| ! | ATGCTATGATTTGCAGCATC+CGG | + | chr1.4:59222236-59222255 | None:intergenic | 40.0% |
| ! | TGCCATTTGTAGGGATTGTT+CGG | - | chr1.4:59222114-59222133 | MS.gene39990:intron | 40.0% |
| !! | AACCGTTCTTTTAGGTCTTC+AGG | + | chr1.4:59222817-59222836 | None:intergenic | 40.0% |
| !! | CGTAGACTTGTTAGTTGTCT+CGG | - | chr1.4:59221512-59221531 | MS.gene39990:intron | 40.0% |
| !! | CTTGATCTTAACTTGTAGGC+CGG | - | chr1.4:59221656-59221675 | MS.gene39990:CDS | 40.0% |
| !! | GTTCTTTTAGGTCTTCAGGT+AGG | + | chr1.4:59222813-59222832 | None:intergenic | 40.0% |
| !!! | GATGTGGTTTTGGACAACAA+TGG | - | chr1.4:59221341-59221360 | MS.gene39990:CDS | 40.0% |
| !!! | GGAAGCATTTGATGTGGTTT+TGG | - | chr1.4:59221331-59221350 | MS.gene39990:CDS | 40.0% |
| AAAGCAGATGCTGGTCATGT+TGG | - | chr1.4:59221873-59221892 | MS.gene39990:CDS | 45.0% | |
| ACAACAAAGATTGCGAGGAG+TGG | - | chr1.4:59221970-59221989 | MS.gene39990:intron | 45.0% | |
| AGAGGAGATTGATAGAGAGG+AGG | + | chr1.4:59220789-59220808 | None:intergenic | 45.0% | |
| AGGGTGTGATAGAAAGGTAG+AGG | + | chr1.4:59220807-59220826 | None:intergenic | 45.0% | |
| ATGAACCTCCCCATGTTGAA+GGG | - | chr1.4:59221754-59221773 | MS.gene39990:intron | 45.0% | |
| ATGTGAAAGTGGGAGGAGAT+TGG | + | chr1.4:59220726-59220745 | None:intergenic | 45.0% | |
| CAACAATGGCAAGGATCTTG+AGG | - | chr1.4:59221355-59221374 | MS.gene39990:CDS | 45.0% | |
| CCACAGTATATGATAGGGTC+TGG | - | chr1.4:59221945-59221964 | MS.gene39990:intron | 45.0% | |
| CCAGACCCTATCATATACTG+TGG | + | chr1.4:59221948-59221967 | None:intergenic | 45.0% | |
| GATCACAAAGCTGATCAGCA+AGG | + | chr1.4:59222550-59222569 | None:intergenic | 45.0% | |
| GATCGTGCAGTGACTCTAAA+TGG | - | chr1.4:59222272-59222291 | MS.gene39990:CDS | 45.0% | |
| GCCATTTGTAGGGATTGTTC+GGG | - | chr1.4:59222115-59222134 | MS.gene39990:intron | 45.0% | |
| GGTAGAGGAGATTGATAGAG+AGG | + | chr1.4:59220792-59220811 | None:intergenic | 45.0% | |
| TACCACATTACGGAAAGGGA+AGG | + | chr1.4:59222387-59222406 | None:intergenic | 45.0% | |
| TAGGTCTTCAGGTAGGTTTG+TGG | + | chr1.4:59222806-59222825 | None:intergenic | 45.0% | |
| TCCCGAACAATCCCTACAAA+TGG | + | chr1.4:59222119-59222138 | None:intergenic | 45.0% | |
| TCTGTCACCATTCTCACTGT+TGG | - | chr1.4:59220980-59220999 | MS.gene39990:intron | 45.0% | |
| TTGACAGTTGGGCAGTATTC+AGG | - | chr1.4:59221922-59221941 | MS.gene39990:intron | 45.0% | |
| TTGTAGGCCGGTGATTGATT+GGG | - | chr1.4:59221668-59221687 | MS.gene39990:CDS | 45.0% | |
| ! | AAGTGCTGCAGAGAAGAAGA+AGG | - | chr1.4:59220877-59220896 | MS.gene39990:intron | 45.0% |
| ! | TGCTATGATTTGCAGCATCC+GGG | + | chr1.4:59222235-59222254 | None:intergenic | 45.0% |
| !! | ATGTAGGGAGTGTTGTAGGA+GGG | - | chr1.4:59221309-59221328 | MS.gene39990:CDS | 45.0% |
| !!! | GGTTTTGGACAACAATGGCA+AGG | - | chr1.4:59221346-59221365 | MS.gene39990:CDS | 45.0% |
| AAACTATGCGCTCAAGCTGC+AGG | - | chr1.4:59222302-59222321 | MS.gene39990:CDS | 50.0% | |
| AAGTGGGAGGAGATTGGAAG+AGG | + | chr1.4:59220720-59220739 | None:intergenic | 50.0% | |
| ACAACACTCCCTACATCTGC+AGG | + | chr1.4:59221305-59221324 | None:intergenic | 50.0% | |
| AGAGGTTGCAGTGAAGAGCA+AGG | + | chr1.4:59220702-59220721 | None:intergenic | 50.0% | |
| AGCCTTCCCTTTCCGTAATG+TGG | - | chr1.4:59222382-59222401 | MS.gene39990:intron | 50.0% | |
| AGGTGAAGAGGAAGCAAGCA+TGG | + | chr1.4:59220678-59220697 | None:intergenic | 50.0% | |
| CACAGCATGTCCACCACTAT+TGG | + | chr1.4:59220918-59220937 | None:intergenic | 50.0% | |
| CCTGAACCAGGAATTAGCAC+AGG | + | chr1.4:59222146-59222165 | None:intergenic | 50.0% | |
| CCTGTGCTAATTCCTGGTTC+AGG | - | chr1.4:59222143-59222162 | MS.gene39990:intron | 50.0% | |
| CTCTTGGCCCAATCAATCAC+CGG | + | chr1.4:59221678-59221697 | None:intergenic | 50.0% | |
| CTTGTAGGCCGGTGATTGAT+TGG | - | chr1.4:59221667-59221686 | MS.gene39990:CDS | 50.0% | |
| GAAGAGCAAGGTAGGTGAAG+AGG | + | chr1.4:59220690-59220709 | None:intergenic | 50.0% | |
| GACAGACCTGTGCTAATTCC+TGG | - | chr1.4:59222137-59222156 | MS.gene39990:intron | 50.0% | |
| GACTCTAGCTGTTGAGAACC+CGG | - | chr1.4:59222214-59222233 | MS.gene39990:intron | 50.0% | |
| GATGAACCTCCCCATGTTGA+AGG | - | chr1.4:59221753-59221772 | MS.gene39990:intron | 50.0% | |
| GATGCTGTCAAAGCAGATGC+TGG | - | chr1.4:59221864-59221883 | MS.gene39990:CDS | 50.0% | |
| GGGGAAATCCTGCAGATGTA+GGG | - | chr1.4:59221294-59221313 | MS.gene39990:CDS | 50.0% | |
| GTGAGTTGCAATCCTGAACC+AGG | + | chr1.4:59222158-59222177 | None:intergenic | 50.0% | |
| GTTGCAGTGAAGAGCAAGGT+AGG | + | chr1.4:59220698-59220717 | None:intergenic | 50.0% | |
| TCCATGATGCAGAGTTCCCT+CGG | + | chr1.4:59222658-59222677 | None:intergenic | 50.0% | |
| TGAACCTCCCCATGTTGAAG+GGG | - | chr1.4:59221755-59221774 | MS.gene39990:intron | 50.0% | |
| TGCTGGAGGCAGTACAGTAT+GGG | - | chr1.4:59221274-59221293 | MS.gene39990:CDS | 50.0% | |
| TGGGGAAATCCTGCAGATGT+AGG | - | chr1.4:59221293-59221312 | MS.gene39990:CDS | 50.0% | |
| TTGCTTAGCACCAGCACTCT+TGG | + | chr1.4:59221694-59221713 | None:intergenic | 50.0% | |
| ! | ATTGATTGGGCCAAGAGTGC+TGG | - | chr1.4:59221681-59221700 | MS.gene39990:CDS | 50.0% |
| ! | GCAAAAGAGCTTCTTGGTGC+TGG | - | chr1.4:59220953-59220972 | MS.gene39990:intron | 50.0% |
| !! | AGGAGGGGAAGCATTTGATG+TGG | - | chr1.4:59221325-59221344 | MS.gene39990:CDS | 50.0% |
| !! | AGTGGTGGACATGCTGTGAT+TGG | - | chr1.4:59220920-59220939 | MS.gene39990:intron | 50.0% |
| !! | CAGGAAATTGTGAGTGCTGG+AGG | - | chr1.4:59221260-59221279 | MS.gene39990:CDS | 50.0% |
| !! | GACAGGCACTGGAACTTTCA+AGG | + | chr1.4:59222911-59222930 | None:intergenic | 50.0% |
| !! | GATGTAGGGAGTGTTGTAGG+AGG | - | chr1.4:59221308-59221327 | MS.gene39990:CDS | 50.0% |
| !! | GCAGATGTAGGGAGTGTTGT+AGG | - | chr1.4:59221305-59221324 | MS.gene39990:CDS | 50.0% |
| !! | TGTAGGGAGTGTTGTAGGAG+GGG | - | chr1.4:59221310-59221329 | MS.gene39990:CDS | 50.0% |
| ACCGAGGGAACTCTGCATCA+TGG | - | chr1.4:59222654-59222673 | MS.gene39990:CDS | 55.0% | |
| CATACCCCTTCAACATGGGG+AGG | + | chr1.4:59221762-59221781 | None:intergenic | 55.0% | |
| GCAAGGATCTTGAGGCTGTG+AGG | - | chr1.4:59221363-59221382 | MS.gene39990:CDS | 55.0% | |
| GCTGGAGGCAGTACAGTATG+GGG | - | chr1.4:59221275-59221294 | MS.gene39990:CDS | 55.0% | |
| GTGCTGGAGGCAGTACAGTA+TGG | - | chr1.4:59221273-59221292 | MS.gene39990:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 59220671 | 59222933 | 59220671 | ID=MS.gene39990 |
| chr1.4 | mRNA | 59220671 | 59222933 | 59220671 | ID=MS.gene39990.t1;Parent=MS.gene39990 |
| chr1.4 | exon | 59222553 | 59222933 | 59222553 | ID=MS.gene39990.t1.exon1;Parent=MS.gene39990.t1 |
| chr1.4 | CDS | 59222553 | 59222933 | 59222553 | ID=cds.MS.gene39990.t1;Parent=MS.gene39990.t1 |
| chr1.4 | exon | 59222220 | 59222341 | 59222220 | ID=MS.gene39990.t1.exon2;Parent=MS.gene39990.t1 |
| chr1.4 | CDS | 59222220 | 59222341 | 59222220 | ID=cds.MS.gene39990.t1;Parent=MS.gene39990.t1 |
| chr1.4 | exon | 59221828 | 59221930 | 59221828 | ID=MS.gene39990.t1.exon3;Parent=MS.gene39990.t1 |
| chr1.4 | CDS | 59221828 | 59221930 | 59221828 | ID=cds.MS.gene39990.t1;Parent=MS.gene39990.t1 |
| chr1.4 | exon | 59221602 | 59221740 | 59221602 | ID=MS.gene39990.t1.exon4;Parent=MS.gene39990.t1 |
| chr1.4 | CDS | 59221602 | 59221740 | 59221602 | ID=cds.MS.gene39990.t1;Parent=MS.gene39990.t1 |
| chr1.4 | exon | 59221201 | 59221478 | 59221201 | ID=MS.gene39990.t1.exon5;Parent=MS.gene39990.t1 |
| chr1.4 | CDS | 59221201 | 59221478 | 59221201 | ID=cds.MS.gene39990.t1;Parent=MS.gene39990.t1 |
| chr1.4 | exon | 59220671 | 59220853 | 59220671 | ID=MS.gene39990.t1.exon6;Parent=MS.gene39990.t1 |
| chr1.4 | CDS | 59220671 | 59220853 | 59220671 | ID=cds.MS.gene39990.t1;Parent=MS.gene39990.t1 |
| Gene Sequence |
| Protein sequence |
