Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35021.t1 | XP_013457192.1 | 96.8 | 946 | 27 | 1 | 1 | 946 | 1 | 943 | 0.00E+00 | 1663.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35021.t1 | Q9SZC9 | 70.7 | 794 | 223 | 3 | 123 | 913 | 133 | 919 | 0.0e+00 | 1087.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35021.t1 | A0A072UQ87 | 96.8 | 946 | 27 | 1 | 1 | 946 | 1 | 943 | 0.0e+00 | 1663.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene35021 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene35021 | 0.860359 | 2.18E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene35021 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene35021 | 0.801682 | 8.02E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene35021 | 0.82505 | 5.79E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene35021 | 0.851596 | 8.01E-61 | -1.69E-46 |
| MS.gene049427 | MS.gene35021 | 0.89348 | 6.04E-75 | -1.69E-46 |
| MS.gene049609 | MS.gene35021 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene049614 | MS.gene35021 | 0.828654 | 7.97E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene35021 | 0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene35021 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene049828 | MS.gene35021 | 0.811947 | 5.43E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene35021 | 0.813605 | 2.35E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene35021 | 0.835017 | 2.14E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene35021 | 0.819599 | 1.07E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene35021 | 0.867673 | 1.15E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene35021 | 0.812012 | 5.25E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene35021 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene35021 | 0.838171 | 3.37E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene35021 | 0.845207 | 4.69E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene35021 | 0.874042 | 9.20E-68 | -1.69E-46 |
| MS.gene050767 | MS.gene35021 | 0.83756 | 4.84E-57 | -1.69E-46 |
| MS.gene050770 | MS.gene35021 | 0.842301 | 2.81E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene35021 | 0.850714 | 1.42E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene35021 | 0.815884 | 7.35E-52 | -1.69E-46 |
| MS.gene050812 | MS.gene35021 | 0.845274 | 4.50E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene35021 | 0.879806 | 9.22E-70 | -1.69E-46 |
| MS.gene05101 | MS.gene35021 | 0.811413 | 7.09E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene35021 | 0.815802 | 7.67E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene35021 | 0.851493 | 8.56E-61 | -1.69E-46 |
| MS.gene051360 | MS.gene35021 | 0.813449 | 2.55E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene35021 | 0.862658 | 4.34E-64 | -1.69E-46 |
| MS.gene051617 | MS.gene35021 | 0.816724 | 4.77E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene35021 | 0.848 | 8.10E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene35021 | 0.840273 | 9.60E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene35021 | 0.808934 | 2.43E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene35021 | 0.830954 | 2.19E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene35021 | 0.820137 | 8.04E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene35021 | 0.825148 | 5.49E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene35021 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene35021 | 0.820249 | 7.58E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene35021 | 0.819092 | 1.39E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene35021 | 0.858133 | 1.02E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene35021 | 0.807047 | 6.12E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene35021 | 0.840768 | 7.13E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene35021 | 0.832231 | 1.06E-55 | -1.69E-46 |
| MS.gene052508 | MS.gene35021 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene052510 | MS.gene35021 | 0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene35021 | 0.805283 | 1.44E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene35021 | 0.835424 | 1.69E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene35021 | 0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene35021 | 0.832588 | 8.68E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene35021 | 0.819744 | 9.89E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene35021 | 0.854543 | 1.15E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene35021 | 0.89011 | 1.32E-73 | -1.69E-46 |
| MS.gene053207 | MS.gene35021 | 0.84839 | 6.32E-60 | -1.69E-46 |
| MS.gene053209 | MS.gene35021 | 0.816496 | 5.37E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene35021 | 0.846983 | 1.54E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene35021 | 0.841588 | 4.34E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene35021 | 0.869736 | 2.48E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene35021 | 0.817341 | 3.47E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene35021 | 0.848176 | 7.24E-60 | -1.69E-46 |
| MS.gene053579 | MS.gene35021 | 0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene053813 | MS.gene35021 | 0.805899 | 1.07E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene35021 | 0.8036 | 3.23E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene35021 | 0.824622 | 7.31E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene35021 | 0.818545 | 1.85E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene35021 | 0.842933 | 1.91E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene35021 | 0.816959 | 4.23E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene35021 | 0.822114 | 2.82E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene35021 | 0.845579 | 3.72E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene35021 | 0.817643 | 2.96E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene35021 | 0.816605 | 5.07E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene35021 | 0.816648 | 4.96E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene35021 | 0.843635 | 1.24E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene35021 | 0.820412 | 6.95E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene35021 | 0.822414 | 2.40E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene35021 | 0.81627 | 6.03E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene35021 | 0.803174 | 3.95E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene35021 | 0.809705 | 1.66E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene35021 | 0.840927 | 6.47E-58 | -1.69E-46 |
| MS.gene055397 | MS.gene35021 | 0.845133 | 4.91E-59 | -1.69E-46 |
| MS.gene055412 | MS.gene35021 | 0.850185 | 2.00E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene35021 | 0.836869 | 7.27E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene35021 | 0.817488 | 3.21E-52 | -1.69E-46 |
| MS.gene055620 | MS.gene35021 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene35021 | 0.826161 | 3.16E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene35021 | 0.808269 | 3.36E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene35021 | 0.841376 | 4.93E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene35021 | 0.863402 | 2.55E-64 | -1.69E-46 |
| MS.gene05592 | MS.gene35021 | 0.849777 | 2.60E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene35021 | 0.823311 | 1.48E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene35021 | 0.814474 | 1.51E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene35021 | 0.834668 | 2.62E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene35021 | 0.814131 | 1.80E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene35021 | 0.853601 | 2.15E-61 | -1.69E-46 |
| MS.gene056422 | MS.gene35021 | 0.820181 | 7.85E-53 | -1.69E-46 |
| MS.gene056510 | MS.gene35021 | 0.80272 | 4.91E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene35021 | 0.830035 | 3.68E-55 | -1.69E-46 |
| MS.gene056549 | MS.gene35021 | 0.843966 | 1.01E-58 | -1.69E-46 |
| MS.gene056609 | MS.gene35021 | 0.83365 | 4.72E-56 | -1.69E-46 |
| MS.gene056611 | MS.gene35021 | 0.800594 | 1.34E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene35021 | 0.823534 | 1.32E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene35021 | 0.800262 | 1.57E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene35021 | 0.803168 | 3.96E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene35021 | 0.886072 | 4.70E-72 | -1.69E-46 |
| MS.gene056947 | MS.gene35021 | 0.839614 | 1.43E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene35021 | 0.896753 | 2.73E-76 | -1.69E-46 |
| MS.gene057129 | MS.gene35021 | 0.855408 | 6.44E-62 | -1.69E-46 |
| MS.gene057146 | MS.gene35021 | 0.865659 | 5.03E-65 | -1.69E-46 |
| MS.gene057285 | MS.gene35021 | 0.820925 | 5.30E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene35021 | 0.875352 | 3.30E-68 | -1.69E-46 |
| MS.gene05735 | MS.gene35021 | 0.84155 | 4.44E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene35021 | 0.843541 | 1.32E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene35021 | 0.805832 | 1.10E-49 | -1.69E-46 |
| MS.gene057449 | MS.gene35021 | 0.818575 | 1.82E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene35021 | 0.816928 | 4.29E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene35021 | 0.817398 | 3.37E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene35021 | 0.815468 | 9.10E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene35021 | 0.806641 | 7.45E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene35021 | 0.80169 | 7.99E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene35021 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene35021 | 0.8358 | 1.36E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene35021 | 0.846108 | 2.67E-59 | -1.69E-46 |
| MS.gene058323 | MS.gene35021 | 0.873557 | 1.34E-67 | -1.69E-46 |
| MS.gene05837 | MS.gene35021 | 0.814339 | 1.62E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene35021 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene35021 | 0.85579 | 4.98E-62 | -1.69E-46 |
| MS.gene058700 | MS.gene35021 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene35021 | 0.831459 | 1.65E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene35021 | 0.829107 | 6.19E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene35021 | 0.809118 | 2.22E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene35021 | 0.856142 | 3.93E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene35021 | 0.805227 | 1.48E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene35021 | 0.80848 | 3.03E-50 | -1.69E-46 |
| MS.gene059305 | MS.gene35021 | 0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene059342 | MS.gene35021 | 0.801757 | 7.74E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene35021 | 0.85171 | 7.43E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene35021 | 0.880534 | 5.07E-70 | -1.69E-46 |
| MS.gene05959 | MS.gene35021 | 0.845322 | 4.36E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene35021 | 0.85264 | 4.04E-61 | -1.69E-46 |
| MS.gene059688 | MS.gene35021 | 0.846344 | 2.30E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene35021 | 0.832097 | 1.15E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene35021 | 0.828905 | 6.93E-55 | -1.69E-46 |
| MS.gene059708 | MS.gene35021 | 0.828512 | 8.63E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene35021 | 0.839679 | 1.37E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene35021 | 0.824804 | 6.62E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene35021 | 0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene05986 | MS.gene35021 | 0.847122 | 1.41E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene35021 | 0.829606 | 4.69E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene35021 | 0.899178 | 2.56E-77 | -1.69E-46 |
| MS.gene060193 | MS.gene35021 | 0.846786 | 1.75E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene35021 | 0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene35021 | 0.806652 | 7.41E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene35021 | 0.878714 | 2.25E-69 | -1.69E-46 |
| MS.gene060818 | MS.gene35021 | 0.877972 | 4.09E-69 | -1.69E-46 |
| MS.gene060835 | MS.gene35021 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene35021 | 0.864965 | 8.32E-65 | -1.69E-46 |
| MS.gene06090 | MS.gene35021 | 0.814968 | 1.18E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene35021 | 0.84513 | 4.92E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene35021 | 0.84306 | 1.77E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene35021 | -0.850125 | 2.08E-60 | -1.69E-46 |
| MS.gene061134 | MS.gene35021 | 0.806815 | 6.85E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene35021 | 0.824637 | 7.25E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene35021 | 0.898062 | 7.66E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35021.t1 | MTR_4g094232 | 96.934 | 946 | 26 | 1 | 1 | 946 | 1 | 943 | 0.0 | 1863 |
| MS.gene35021.t1 | MTR_3g105190 | 43.773 | 827 | 398 | 16 | 129 | 911 | 78 | 881 | 0.0 | 613 |
| MS.gene35021.t1 | MTR_3g105190 | 42.297 | 714 | 347 | 15 | 129 | 800 | 78 | 768 | 7.74e-164 | 498 |
| MS.gene35021.t1 | MTR_5g010420 | 38.846 | 641 | 353 | 8 | 290 | 911 | 347 | 967 | 1.67e-126 | 407 |
| MS.gene35021.t1 | MTR_8g079250 | 38.846 | 641 | 354 | 9 | 290 | 910 | 353 | 975 | 2.63e-124 | 402 |
| MS.gene35021.t1 | MTR_2g035840 | 36.364 | 715 | 392 | 17 | 218 | 895 | 272 | 960 | 1.68e-118 | 386 |
| MS.gene35021.t1 | MTR_8g012390 | 37.423 | 652 | 364 | 12 | 269 | 896 | 301 | 932 | 6.92e-116 | 378 |
| MS.gene35021.t1 | MTR_4g094695 | 38.043 | 644 | 343 | 12 | 287 | 895 | 339 | 961 | 3.60e-115 | 377 |
| MS.gene35021.t1 | MTR_8g079250 | 37.002 | 527 | 294 | 9 | 290 | 796 | 353 | 861 | 1.54e-87 | 299 |
| MS.gene35021.t1 | MTR_8g012390 | 35.466 | 547 | 309 | 12 | 269 | 791 | 301 | 827 | 7.49e-81 | 280 |
| MS.gene35021.t1 | MTR_8g079250 | 43.210 | 324 | 170 | 4 | 290 | 602 | 353 | 673 | 7.60e-68 | 241 |
| MS.gene35021.t1 | MTR_2g036380 | 33.149 | 543 | 317 | 9 | 327 | 860 | 53 | 558 | 1.61e-67 | 240 |
| MS.gene35021.t1 | MTR_2g036380 | 33.149 | 543 | 317 | 9 | 327 | 860 | 143 | 648 | 1.10e-66 | 240 |
| MS.gene35021.t1 | MTR_2g036380 | 33.137 | 510 | 297 | 8 | 358 | 860 | 24 | 496 | 1.89e-65 | 233 |
| MS.gene35021.t1 | MTR_2g036380 | 34.934 | 458 | 262 | 7 | 410 | 860 | 37 | 465 | 6.55e-65 | 231 |
| MS.gene35021.t1 | MTR_4g127580 | 32.418 | 546 | 322 | 11 | 354 | 886 | 177 | 688 | 4.48e-64 | 235 |
| MS.gene35021.t1 | MTR_4g094985 | 30.534 | 524 | 324 | 15 | 394 | 886 | 255 | 769 | 1.87e-54 | 204 |
| MS.gene35021.t1 | MTR_7g116990 | 60.256 | 78 | 28 | 2 | 140 | 214 | 82 | 159 | 5.05e-23 | 97.1 |
| MS.gene35021.t1 | MTR_1g009720 | 25.175 | 572 | 327 | 18 | 376 | 886 | 133 | 664 | 3.66e-20 | 97.1 |
| MS.gene35021.t1 | MTR_8g063880 | 23.953 | 597 | 341 | 17 | 376 | 914 | 133 | 674 | 4.23e-20 | 96.7 |
| MS.gene35021.t1 | MTR_3g108800 | 24.645 | 564 | 329 | 18 | 376 | 879 | 132 | 659 | 7.77e-20 | 95.9 |
| MS.gene35021.t1 | MTR_2g036650 | 23.498 | 566 | 334 | 14 | 376 | 879 | 138 | 666 | 8.37e-20 | 95.9 |
| MS.gene35021.t1 | MTR_3g108800 | 24.645 | 564 | 329 | 18 | 376 | 879 | 133 | 660 | 8.62e-20 | 95.9 |
| MS.gene35021.t1 | MTR_6g011310 | 24.680 | 547 | 308 | 15 | 376 | 857 | 135 | 642 | 3.01e-19 | 94.0 |
| MS.gene35021.t1 | MTR_6g011310 | 24.314 | 547 | 315 | 14 | 376 | 857 | 135 | 647 | 4.28e-19 | 93.6 |
| MS.gene35021.t1 | MTR_7g117500 | 25.094 | 534 | 310 | 13 | 384 | 858 | 150 | 652 | 6.50e-19 | 92.8 |
| MS.gene35021.t1 | MTR_4g116950 | 23.000 | 600 | 343 | 19 | 376 | 914 | 134 | 675 | 6.76e-19 | 92.8 |
| MS.gene35021.t1 | MTR_4g127710 | 24.028 | 566 | 330 | 15 | 376 | 879 | 136 | 663 | 1.10e-18 | 92.0 |
| MS.gene35021.t1 | MTR_4g127710 | 23.077 | 598 | 345 | 16 | 376 | 914 | 136 | 677 | 1.32e-18 | 92.0 |
| MS.gene35021.t1 | MTR_2g104860 | 23.906 | 594 | 345 | 17 | 376 | 914 | 131 | 672 | 1.38e-18 | 92.0 |
| MS.gene35021.t1 | MTR_8g006790 | 24.457 | 552 | 319 | 15 | 376 | 863 | 141 | 658 | 2.19e-18 | 91.3 |
| MS.gene35021.t1 | MTR_4g107500 | 23.766 | 547 | 318 | 15 | 376 | 857 | 137 | 649 | 4.28e-18 | 90.5 |
| MS.gene35021.t1 | MTR_8g045070 | 23.684 | 532 | 324 | 17 | 398 | 850 | 206 | 734 | 4.37e-18 | 90.1 |
| MS.gene35021.t1 | MTR_2g449840 | 22.742 | 598 | 347 | 18 | 376 | 914 | 134 | 675 | 8.80e-18 | 89.4 |
| MS.gene35021.t1 | MTR_7g117500 | 24.474 | 523 | 316 | 13 | 384 | 858 | 150 | 641 | 1.17e-16 | 85.5 |
| MS.gene35021.t1 | MTR_3g103270 | 26.667 | 195 | 103 | 3 | 718 | 872 | 611 | 805 | 1.50e-12 | 72.4 |
| MS.gene35021.t1 | MTR_7g100110 | 26.738 | 187 | 105 | 4 | 714 | 868 | 628 | 814 | 1.73e-11 | 68.9 |
| MS.gene35021.t1 | MTR_0005s0140 | 26.404 | 178 | 105 | 3 | 720 | 871 | 567 | 744 | 7.60e-11 | 66.6 |
| MS.gene35021.t1 | MTR_4g043690 | 26.404 | 178 | 105 | 3 | 720 | 871 | 652 | 829 | 9.96e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35021.t1 | AT4G33520 | 70.655 | 794 | 223 | 3 | 123 | 913 | 133 | 919 | 0.0 | 1137 |
| MS.gene35021.t1 | AT4G33520 | 70.529 | 794 | 224 | 3 | 123 | 913 | 133 | 919 | 0.0 | 1134 |
| MS.gene35021.t1 | AT5G21930 | 41.844 | 846 | 405 | 17 | 130 | 919 | 67 | 881 | 0.0 | 610 |
| MS.gene35021.t1 | AT5G21930 | 41.844 | 846 | 405 | 17 | 130 | 919 | 67 | 881 | 0.0 | 610 |
| MS.gene35021.t1 | AT5G21930 | 41.017 | 846 | 389 | 18 | 130 | 919 | 67 | 858 | 0.0 | 582 |
| MS.gene35021.t1 | AT5G21930 | 40.702 | 769 | 369 | 17 | 130 | 842 | 67 | 804 | 7.14e-176 | 531 |
| MS.gene35021.t1 | AT1G63440 | 39.626 | 641 | 347 | 9 | 290 | 910 | 354 | 974 | 5.95e-126 | 406 |
| MS.gene35021.t1 | AT5G44790 | 37.258 | 671 | 364 | 13 | 261 | 895 | 321 | 970 | 1.24e-110 | 365 |
| MS.gene35021.t1 | AT4G30110 | 32.768 | 531 | 324 | 8 | 332 | 860 | 152 | 651 | 1.12e-72 | 259 |
| MS.gene35021.t1 | AT4G30110 | 32.768 | 531 | 324 | 8 | 332 | 860 | 152 | 651 | 1.12e-72 | 259 |
| MS.gene35021.t1 | AT2G19110 | 31.156 | 597 | 369 | 11 | 328 | 921 | 158 | 715 | 2.34e-65 | 239 |
| MS.gene35021.t1 | AT2G19110 | 31.156 | 597 | 369 | 11 | 328 | 921 | 158 | 715 | 2.34e-65 | 239 |
| MS.gene35021.t1 | AT2G19110 | 31.156 | 597 | 369 | 11 | 328 | 921 | 158 | 715 | 2.34e-65 | 239 |
| MS.gene35021.t1 | AT4G37270 | 27.556 | 675 | 396 | 18 | 262 | 886 | 144 | 775 | 3.78e-46 | 179 |
| MS.gene35021.t1 | AT4G30120 | 29.688 | 384 | 235 | 7 | 338 | 716 | 4 | 357 | 2.17e-42 | 160 |
| MS.gene35021.t1 | AT4G30120 | 29.688 | 384 | 235 | 7 | 338 | 716 | 163 | 516 | 7.64e-41 | 159 |
| MS.gene35021.t1 | AT4G33520 | 66.019 | 103 | 35 | 0 | 123 | 225 | 133 | 235 | 4.95e-37 | 139 |
| MS.gene35021.t1 | AT4G33520 | 71.277 | 94 | 27 | 0 | 123 | 216 | 133 | 226 | 1.85e-36 | 138 |
| MS.gene35021.t1 | AT1G80660 | 23.497 | 549 | 323 | 13 | 373 | 857 | 4 | 519 | 2.81e-20 | 97.4 |
| MS.gene35021.t1 | AT1G80660 | 22.720 | 603 | 341 | 15 | 376 | 914 | 136 | 677 | 3.63e-20 | 97.1 |
| MS.gene35021.t1 | AT1G80660 | 22.720 | 603 | 341 | 15 | 376 | 914 | 136 | 677 | 3.90e-20 | 97.1 |
| MS.gene35021.t1 | AT1G80660 | 22.720 | 603 | 341 | 15 | 376 | 914 | 136 | 677 | 5.28e-20 | 96.7 |
| MS.gene35021.t1 | AT5G57350 | 23.471 | 605 | 334 | 18 | 376 | 914 | 132 | 673 | 3.48e-19 | 94.0 |
| MS.gene35021.t1 | AT5G57350 | 23.471 | 605 | 334 | 18 | 376 | 914 | 132 | 673 | 3.48e-19 | 94.0 |
| MS.gene35021.t1 | AT5G57350 | 23.471 | 605 | 334 | 18 | 376 | 914 | 132 | 673 | 3.48e-19 | 94.0 |
| MS.gene35021.t1 | AT3G60330 | 24.486 | 535 | 308 | 17 | 385 | 858 | 145 | 644 | 7.21e-19 | 92.8 |
| MS.gene35021.t1 | AT3G60330 | 24.486 | 535 | 308 | 17 | 385 | 858 | 145 | 644 | 7.21e-19 | 92.8 |
| MS.gene35021.t1 | AT3G47950 | 24.000 | 550 | 313 | 15 | 376 | 857 | 139 | 651 | 1.42e-18 | 92.0 |
| MS.gene35021.t1 | AT3G47950 | 24.000 | 550 | 313 | 15 | 376 | 857 | 139 | 651 | 1.42e-18 | 92.0 |
| MS.gene35021.t1 | AT3G60330 | 24.299 | 535 | 309 | 17 | 385 | 858 | 145 | 644 | 1.58e-18 | 91.7 |
| MS.gene35021.t1 | AT3G60330 | 24.299 | 535 | 309 | 17 | 385 | 858 | 145 | 644 | 1.58e-18 | 91.7 |
| MS.gene35021.t1 | AT2G24520 | 24.731 | 558 | 336 | 17 | 376 | 879 | 113 | 640 | 2.54e-18 | 91.3 |
| MS.gene35021.t1 | AT2G24520 | 24.731 | 558 | 336 | 17 | 376 | 879 | 113 | 640 | 2.54e-18 | 91.3 |
| MS.gene35021.t1 | AT2G24520 | 24.731 | 558 | 336 | 17 | 376 | 879 | 176 | 703 | 3.07e-18 | 90.9 |
| MS.gene35021.t1 | AT2G18960 | 23.909 | 573 | 333 | 15 | 376 | 886 | 67 | 598 | 4.58e-18 | 90.1 |
| MS.gene35021.t1 | AT2G18960 | 23.909 | 573 | 333 | 15 | 376 | 886 | 67 | 598 | 4.58e-18 | 90.1 |
| MS.gene35021.t1 | AT2G18960 | 23.909 | 573 | 333 | 15 | 376 | 886 | 131 | 662 | 6.38e-18 | 89.7 |
| MS.gene35021.t1 | AT5G62670 | 23.636 | 550 | 315 | 15 | 376 | 857 | 135 | 647 | 2.27e-17 | 88.2 |
| MS.gene35021.t1 | AT4G11730 | 23.541 | 514 | 314 | 16 | 373 | 879 | 129 | 570 | 1.13e-14 | 79.0 |
| MS.gene35021.t1 | AT1G10130 | 27.014 | 211 | 108 | 4 | 702 | 872 | 569 | 773 | 4.17e-14 | 77.4 |
| MS.gene35021.t1 | AT1G07670 | 26.404 | 178 | 101 | 2 | 721 | 868 | 621 | 798 | 1.34e-11 | 69.3 |
| MS.gene35021.t1 | AT1G07670 | 26.404 | 178 | 101 | 2 | 721 | 868 | 621 | 798 | 1.34e-11 | 69.3 |
| MS.gene35021.t1 | AT1G07810 | 26.404 | 178 | 101 | 2 | 721 | 868 | 621 | 798 | 1.48e-11 | 69.3 |
| MS.gene35021.t1 | AT3G57330 | 25.556 | 180 | 108 | 2 | 720 | 873 | 584 | 763 | 1.50e-11 | 69.3 |
| MS.gene35021.t1 | AT3G57330 | 25.556 | 180 | 108 | 2 | 720 | 873 | 639 | 818 | 1.72e-11 | 68.9 |
| MS.gene35021.t1 | AT2G41560 | 25.000 | 180 | 109 | 2 | 720 | 873 | 540 | 719 | 4.45e-11 | 67.4 |
| MS.gene35021.t1 | AT2G41560 | 25.000 | 180 | 109 | 2 | 720 | 873 | 540 | 719 | 4.45e-11 | 67.4 |
| MS.gene35021.t1 | AT2G41560 | 25.000 | 180 | 109 | 2 | 720 | 873 | 540 | 719 | 4.45e-11 | 67.4 |
| MS.gene35021.t1 | AT3G42640 | 32.051 | 156 | 72 | 3 | 765 | 914 | 548 | 675 | 6.31e-11 | 67.0 |
| MS.gene35021.t1 | AT2G41560 | 25.000 | 180 | 109 | 2 | 720 | 873 | 642 | 821 | 6.62e-11 | 67.0 |
| MS.gene35021.t1 | AT5G57350 | 23.235 | 439 | 226 | 13 | 541 | 914 | 19 | 411 | 7.66e-11 | 66.6 |
Find 232 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAGGTTGGAACTTCTTT+GGG | 0.171947 | 4.4:-20808947 | MS.gene35021:intron |
| CCTCCACTCAACACCTAATT+TGG | 0.175474 | 4.4:+20801972 | None:intergenic |
| CCAAATTGGCAAAAGCAATT+AGG | 0.201723 | 4.4:-20817687 | MS.gene35021:CDS |
| CGAAACCTTTCTGTTATTTA+CGG | 0.231204 | 4.4:+20807988 | None:intergenic |
| TCAACAGGTTGGAACTTCTT+TGG | 0.233522 | 4.4:-20808948 | MS.gene35021:intron |
| TCGAGCTCCGCTGCTTCTTT+TGG | 0.239668 | 4.4:-20818311 | MS.gene35021:CDS |
| GGAGGTGGTGGTAGTGGTTC+TGG | 0.249231 | 4.4:-20818239 | MS.gene35021:CDS |
| CTGTTACCACATTTACGTTT+TGG | 0.261952 | 4.4:-20809510 | MS.gene35021:CDS |
| CTCCGGGGAATATGATAATT+TGG | 0.268356 | 4.4:+20812538 | None:intergenic |
| ACAAATGCAATCAGCATAAT+AGG | 0.274812 | 4.4:+20812726 | None:intergenic |
| CTTTGTGCTGTGTGTCTTGT+TGG | 0.276630 | 4.4:-20815785 | MS.gene35021:CDS |
| GTCGTGAGCTAGCTGTTTCC+TGG | 0.283720 | 4.4:-20815811 | MS.gene35021:CDS |
| GGAGTGTTATTTCCTGTAAA+TGG | 0.286979 | 4.4:-20802179 | MS.gene35021:CDS |
| GCTGGAACTATAAATCTTAA+TGG | 0.287440 | 4.4:-20811362 | MS.gene35021:CDS |
| GAAAATGAAGTATCCAAATT+AGG | 0.298717 | 4.4:-20801985 | None:intergenic |
| GGCCGCCAACTTATCCTTGA+TGG | 0.306972 | 4.4:-20815662 | MS.gene35021:CDS |
| TATGCAGTTGCTTGATGCTT+TGG | 0.329016 | 4.4:-20803057 | MS.gene35021:intron |
| GCAGCTTGCATGCAGTGTTC+TGG | 0.337822 | 4.4:-20809422 | MS.gene35021:intron |
| TTTCCTCATTATTAACTAGA+AGG | 0.337949 | 4.4:+20812613 | None:intergenic |
| TCTTCTGCCGGCGGTGGAAA+TGG | 0.342614 | 4.4:-20818287 | MS.gene35021:CDS |
| TCCACAATTGCTTTCCCAAC+TGG | 0.343391 | 4.4:+20808429 | None:intergenic |
| GCTGATTGCATTTGTCTTGT+TGG | 0.344900 | 4.4:-20812718 | MS.gene35021:CDS |
| CGTAAATAACAGAAAGGTTT+CGG | 0.344973 | 4.4:-20807987 | MS.gene35021:CDS |
| TTGTGTTTGCTTACATTACT+TGG | 0.351895 | 4.4:-20815689 | MS.gene35021:CDS |
| ATTGCTTGTCCTTGTGCACT+AGG | 0.352827 | 4.4:-20809064 | MS.gene35021:CDS |
| TGTTATCATTCTCGATGTTT+CGG | 0.361835 | 4.4:-20818144 | MS.gene35021:intron |
| AGATGCTGCGCAAGAGGTTT+CGG | 0.362319 | 4.4:-20818180 | MS.gene35021:CDS |
| ATCAATTGCAGGGGCTCTCA+TGG | 0.362945 | 4.4:-20802141 | MS.gene35021:CDS |
| CAAATTGGCAAAAGCAATTA+GGG | 0.366216 | 4.4:-20817686 | MS.gene35021:CDS |
| AATATGTTGCATCTCTTGTT+GGG | 0.370058 | 4.4:-20806045 | MS.gene35021:CDS |
| CCAACTAAGCTGTTCATGTT+TGG | 0.371768 | 4.4:+20815614 | None:intergenic |
| CTGATTGCATTTGTCTTGTT+GGG | 0.375029 | 4.4:-20812717 | MS.gene35021:CDS |
| ATGAACAGCTTAGTTGGTCT+TGG | 0.376512 | 4.4:-20815608 | MS.gene35021:CDS |
| AGTGGTTCTGGTGGTGAGTC+TGG | 0.377787 | 4.4:-20818227 | MS.gene35021:CDS |
| GTCAGCATGGTACCATTTAC+AGG | 0.381038 | 4.4:+20802167 | None:intergenic |
| TGAACAGCTTAGTTGGTCTT+GGG | 0.381888 | 4.4:-20815607 | MS.gene35021:CDS |
| ATGCTGACTCCATCAATTGC+AGG | 0.384138 | 4.4:-20802152 | MS.gene35021:CDS |
| CACCAGATCCAGGTTCTTCC+AGG | 0.386613 | 4.4:+20808020 | None:intergenic |
| TAACAGGGCGTTTGAGGTTG+TGG | 0.389375 | 4.4:+20818459 | None:intergenic |
| TGGAGATGGTAGTGTAAAAT+TGG | 0.390644 | 4.4:-20818207 | MS.gene35021:CDS |
| GGAGGTGCTGGAGTTGGAAA+TGG | 0.392164 | 4.4:-20818266 | MS.gene35021:CDS |
| AGCTCGAAACGCAGCGCTTA+CGG | 0.392500 | 4.4:+20818327 | None:intergenic |
| AATAACACTCCAGCTGCAAT+TGG | 0.395774 | 4.4:+20802191 | None:intergenic |
| ATGAGAGCCCCTGCAATTGA+TGG | 0.400213 | 4.4:+20802143 | None:intergenic |
| GGCGTTTGAGGTTGTGGCGG+AGG | 0.403025 | 4.4:+20818465 | None:intergenic |
| GAATATGTTGCATCTCTTGT+TGG | 0.403481 | 4.4:-20806046 | MS.gene35021:CDS |
| CAACAGAGACAGCAATAGTT+TGG | 0.405470 | 4.4:-20817734 | MS.gene35021:CDS |
| GAGTGTGCGGTGAGGTGCTC+CGG | 0.405543 | 4.4:+20818487 | None:intergenic |
| AACCAATCATTTGTCTATGT+TGG | 0.405719 | 4.4:-20806202 | MS.gene35021:CDS |
| ATACTGTAAAGCAAAATCTT+TGG | 0.412418 | 4.4:-20803013 | MS.gene35021:CDS |
| CGGTTGTTGTAGGAAGTAAC+AGG | 0.413393 | 4.4:+20818443 | None:intergenic |
| GGAGGAGGAGGTGGTGGTAG+TGG | 0.418009 | 4.4:-20818245 | MS.gene35021:CDS |
| ACTGTCGTGTTTGACAAAAC+AGG | 0.418806 | 4.4:-20808863 | MS.gene35021:CDS |
| TTGATGCTTTGGAGCTTAGC+AGG | 0.421066 | 4.4:-20803046 | MS.gene35021:CDS |
| GGAAATGGAGGAGGAGGTGG+TGG | 0.421409 | 4.4:-20818251 | MS.gene35021:CDS |
| ACTAGAAGGCGGGCTTTAGA+TGG | 0.422472 | 4.4:+20812627 | None:intergenic |
| TTGTCAGCCAACCGTTGTAT+AGG | 0.423850 | 4.4:+20811248 | None:intergenic |
| CTGCCAGTAACAAAAGAACT+TGG | 0.425987 | 4.4:-20812057 | MS.gene35021:CDS |
| TTGCTTACATTACTTGGTCC+TGG | 0.434389 | 4.4:-20815683 | MS.gene35021:CDS |
| GGCGGTGGAAATGGAGGTGC+TGG | 0.439969 | 4.4:-20818278 | MS.gene35021:CDS |
| TTTGGTTCTTCTGCCGGCGG+TGG | 0.441304 | 4.4:-20818293 | MS.gene35021:CDS |
| ATTGCATTGGGTGGAGGTGT+TGG | 0.443603 | 4.4:-20804090 | MS.gene35021:CDS |
| TGTTGGAGTTGATGATACTT+TGG | 0.444214 | 4.4:-20806185 | MS.gene35021:CDS |
| CCAGGTGGTGAGACTGCTAT+AGG | 0.444534 | 4.4:-20811314 | MS.gene35021:CDS |
| CTTCAGAGTGAGGTTGCAGC+TGG | 0.446609 | 4.4:-20811380 | MS.gene35021:intron |
| TTCATGCATTTCATTCTGTC+GGG | 0.447588 | 4.4:-20815724 | MS.gene35021:CDS |
| GGTAGCAGATGAAACATTCC+TGG | 0.448555 | 4.4:-20808038 | MS.gene35021:CDS |
| TGTTACTGGCAGCGGCTCCC+CGG | 0.450154 | 4.4:+20812068 | None:intergenic |
| AGGAAGTAACAGGGCGTTTG+AGG | 0.450260 | 4.4:+20818453 | None:intergenic |
| AGCCACACCCACTGCTGTAC+TGG | 0.451862 | 4.4:-20809038 | MS.gene35021:intron |
| TCAATTGCAGGGGCTCTCAT+GGG | 0.452440 | 4.4:-20802140 | MS.gene35021:CDS |
| ACAGAAGTAGGTATAATTTG+TGG | 0.454322 | 4.4:+20809475 | None:intergenic |
| GTTGGAAATGGAGGAGGAGG+TGG | 0.455716 | 4.4:-20818254 | MS.gene35021:CDS |
| CTCCAACATAGACAAATGAT+TGG | 0.456283 | 4.4:+20806200 | None:intergenic |
| TTACGGAGTGATGGCGATAA+CGG | 0.456860 | 4.4:+20818380 | None:intergenic |
| TCAAGGAAGTTCAGTTTCAC+TGG | 0.456955 | 4.4:-20809449 | MS.gene35021:CDS |
| AGAGCAGCGCGCGGAAGTTA+CGG | 0.458880 | 4.4:+20818363 | None:intergenic |
| GCATTTCACCGTCATTTCTC+CGG | 0.458962 | 4.4:-20818506 | MS.gene35021:CDS |
| AACCTATGTTGAATCTGATC+TGG | 0.462021 | 4.4:-20802021 | MS.gene35021:CDS |
| AAAGGTTTCGGTTGGGACAT+TGG | 0.462702 | 4.4:-20807975 | MS.gene35021:CDS |
| AGCAATTGTGGATGCCGCTC+AGG | 0.465682 | 4.4:-20808418 | MS.gene35021:CDS |
| ATTCATGCATTTCATTCTGT+CGG | 0.466215 | 4.4:-20815725 | MS.gene35021:CDS |
| CTCATGGGGTTGAGTTCCAT+TGG | 0.466703 | 4.4:-20802125 | MS.gene35021:CDS |
| TTCACATATAGGTATTGCAT+TGG | 0.467979 | 4.4:-20804103 | MS.gene35021:CDS |
| GGAGTTGATGATACTTTGGC+TGG | 0.468126 | 4.4:-20806181 | MS.gene35021:CDS |
| TCACATATAGGTATTGCATT+GGG | 0.469184 | 4.4:-20804102 | MS.gene35021:CDS |
| GTGCCTTTGCGGCAAAGAGA+TGG | 0.471936 | 4.4:+20815753 | None:intergenic |
| AACAGGTTGGAACTTCTTTG+GGG | 0.473835 | 4.4:-20808946 | MS.gene35021:intron |
| GCATAGAAAATGCAAATTCA+AGG | 0.479415 | 4.4:-20808790 | MS.gene35021:intron |
| ATTGATGTCTACATGCTGTC+TGG | 0.480778 | 4.4:-20806088 | MS.gene35021:CDS |
| GATGGTAGTGTAAAATTGGT+TGG | 0.482307 | 4.4:-20818203 | MS.gene35021:CDS |
| AGATAAGAAAGTTGTAGCTA+TGG | 0.482528 | 4.4:-20804163 | MS.gene35021:CDS |
| AATAAACTATTAAAAGAAAG+TGG | 0.483599 | 4.4:-20815959 | MS.gene35021:intron |
| CTCCCATCTCTTTGCCGCAA+AGG | 0.484412 | 4.4:-20815756 | MS.gene35021:CDS |
| AATGCGGGAACGGTTGTTGT+AGG | 0.484939 | 4.4:+20818433 | None:intergenic |
| GCTCTCACAATTCCATCAGC+TGG | 0.488521 | 4.4:+20812123 | None:intergenic |
| CCAAACATGAACAGCTTAGT+TGG | 0.488950 | 4.4:-20815614 | MS.gene35021:CDS |
| TAGGATCGTATTCCAGCTGA+TGG | 0.489405 | 4.4:-20812135 | MS.gene35021:CDS |
| TTAAGCCATCAAGGATAAGT+TGG | 0.494683 | 4.4:+20815657 | None:intergenic |
| CTTCCTTGATATACAGAAGT+AGG | 0.496128 | 4.4:+20809463 | None:intergenic |
| TTCCTGGAAGAACCTGGATC+TGG | 0.497002 | 4.4:-20808022 | MS.gene35021:CDS |
| TACCTATATGTGAAGAAGCC+AGG | 0.497430 | 4.4:+20804112 | None:intergenic |
| ACGGTTATCGCAGAATCCAT+TGG | 0.500062 | 4.4:+20818560 | None:intergenic |
| CTGTAAAGCAAAATCTTTGG+TGG | 0.501627 | 4.4:-20803010 | MS.gene35021:CDS |
| GCCCTGGCTTCTTCACATAT+AGG | 0.501966 | 4.4:-20804114 | MS.gene35021:CDS |
| CAAATTCAGTACATCCAGTT+GGG | 0.502321 | 4.4:-20808443 | MS.gene35021:CDS |
| AATAACAGAAAGGTTTCGGT+TGG | 0.502547 | 4.4:-20807983 | MS.gene35021:CDS |
| CTCATTATTAACTAGAAGGC+GGG | 0.503701 | 4.4:+20812617 | None:intergenic |
| AGCACCTCCATTTCCACCGC+CGG | 0.504429 | 4.4:+20818280 | None:intergenic |
| AATTAACGATGCAGCTGCCC+TGG | 0.505522 | 4.4:-20804130 | MS.gene35021:CDS |
| ACACACAGCACAAAGAGCCC+AGG | 0.508594 | 4.4:+20815793 | None:intergenic |
| AGCATCTGTGAAGAGGATTC+TGG | 0.510233 | 4.4:-20818001 | MS.gene35021:CDS |
| TCAAGGATAAGTTGGCGGCC+AGG | 0.510315 | 4.4:+20815665 | None:intergenic |
| TTTCGGTTGGGACATTGGAA+TGG | 0.511156 | 4.4:-20807970 | MS.gene35021:CDS |
| TACCAGTACAGCAGTGGGTG+TGG | 0.511198 | 4.4:+20809036 | None:intergenic |
| GGAAATGGAGGTGCTGGAGT+TGG | 0.514880 | 4.4:-20818272 | MS.gene35021:CDS |
| CAGAAGTAGGTATAATTTGT+GGG | 0.514986 | 4.4:+20809476 | None:intergenic |
| GGGAGAGGAACACGGAATGC+GGG | 0.517578 | 4.4:+20818418 | None:intergenic |
| ATAACAGAAAGGTTTCGGTT+GGG | 0.517978 | 4.4:-20807982 | MS.gene35021:CDS |
| GAAACATTCCTGGAAGAACC+TGG | 0.518978 | 4.4:-20808028 | MS.gene35021:CDS |
| ATGAATCCATGGTGCCTTTG+CGG | 0.522109 | 4.4:+20815742 | None:intergenic |
| TGCAACCGTAAATAACAGAA+AGG | 0.522473 | 4.4:-20807993 | MS.gene35021:CDS |
| GTGACAATCTTTGTCACCAC+AGG | 0.522909 | 4.4:+20808821 | None:intergenic |
| ATACCTACTTCTGTATATCA+AGG | 0.524373 | 4.4:-20809466 | MS.gene35021:CDS |
| TCCAGTTGGGAAAGCAATTG+TGG | 0.525404 | 4.4:-20808430 | MS.gene35021:CDS |
| TCGTGAGCTAGCTGTTTCCT+GGG | 0.526202 | 4.4:-20815810 | MS.gene35021:CDS |
| TGCCAGTAACAAAAGAACTT+GGG | 0.526358 | 4.4:-20812056 | MS.gene35021:CDS |
| TGCTGACTCCATCAATTGCA+GGG | 0.526945 | 4.4:-20802151 | MS.gene35021:CDS |
| TGCCTTTGCGGCAAAGAGAT+GGG | 0.528545 | 4.4:+20815754 | None:intergenic |
| ACATCGAGAATGATAACATC+AGG | 0.528838 | 4.4:+20818149 | None:intergenic |
| TAATGGAACTCTTACAATAG+AGG | 0.529623 | 4.4:-20811345 | MS.gene35021:CDS |
| CATCTGCGCCGTCGTGGTGA+CGG | 0.530176 | 4.4:+20818541 | None:intergenic |
| TTGCTTGTCCTTGTGCACTA+GGG | 0.531101 | 4.4:-20809063 | MS.gene35021:CDS |
| GCTGGAGTTGGAAATGGAGG+AGG | 0.531934 | 4.4:-20818260 | MS.gene35021:CDS |
| AAGAAGTCCTGTCATATCAC+TGG | 0.537371 | 4.4:+20812659 | None:intergenic |
| ATAACACTCCAGCTGCAATT+GGG | 0.539404 | 4.4:+20802192 | None:intergenic |
| GTAGGGATCCCAATTGCAGC+TGG | 0.539464 | 4.4:-20802200 | MS.gene35021:CDS |
| GTAGATGAGTCAAGTTTCAC+CGG | 0.539679 | 4.4:-20812087 | MS.gene35021:CDS |
| CATTATTCGTCTAGTTGAAG+AGG | 0.540468 | 4.4:-20811288 | MS.gene35021:CDS |
| ACAATAGAGGTACGGAGACC+AGG | 0.540531 | 4.4:-20811332 | MS.gene35021:CDS |
| CGGCAAAGAGATGGGAGAGA+TGG | 0.541820 | 4.4:+20815762 | None:intergenic |
| CATATAGGTATTGCATTGGG+TGG | 0.544126 | 4.4:-20804099 | MS.gene35021:CDS |
| AGTTAATTGCCATGACGCTA+AGG | 0.544890 | 4.4:-20808394 | MS.gene35021:intron |
| CCTATAGCAGTCTCACCACC+TGG | 0.546650 | 4.4:+20811314 | None:intergenic |
| GCAGAACATTTAACTAGCTG+TGG | 0.547024 | 4.4:-20817654 | MS.gene35021:CDS |
| CAATTGCAGGGGCTCTCATG+GGG | 0.547706 | 4.4:-20802139 | MS.gene35021:CDS |
| TGTAAAGCAAAATCTTTGGT+GGG | 0.550261 | 4.4:-20803009 | MS.gene35021:CDS |
| AAGAAAGTTGTAGCTATGGT+TGG | 0.551909 | 4.4:-20804159 | MS.gene35021:CDS |
| GGAGTTGGAAATGGAGGAGG+AGG | 0.552972 | 4.4:-20818257 | MS.gene35021:CDS |
| CCGCCTTCTAGTTAATAATG+AGG | 0.553201 | 4.4:-20812616 | MS.gene35021:CDS |
| GTTGCAACAACACCAGATCC+AGG | 0.553706 | 4.4:+20808010 | None:intergenic |
| GCGCGGAAGTTACGGAGTGA+TGG | 0.555469 | 4.4:+20818371 | None:intergenic |
| GGTTGGAGATGCTGCGCAAG+AGG | 0.555665 | 4.4:-20818186 | MS.gene35021:CDS |
| AGCCATCAAGGATAAGTTGG+CGG | 0.556261 | 4.4:+20815660 | None:intergenic |
| ACATGCTGTCTGGAGACAAA+AGG | 0.556354 | 4.4:-20806078 | MS.gene35021:CDS |
| ATAGGTATTGCATTGGGTGG+AGG | 0.559238 | 4.4:-20804096 | MS.gene35021:CDS |
| AGGGAGAGGAACACGGAATG+CGG | 0.559935 | 4.4:+20818417 | None:intergenic |
| TATACAACGGTTGGCTGACA+AGG | 0.561916 | 4.4:-20811246 | MS.gene35021:intron |
| ATACTTCACGTATGGAGTAA+TGG | 0.562801 | 4.4:-20809539 | MS.gene35021:CDS |
| TTGCATTTGTCTTGTTGGGA+AGG | 0.562844 | 4.4:-20812713 | MS.gene35021:CDS |
| GACCAAATTATCATATTCCC+CGG | 0.566181 | 4.4:-20812540 | MS.gene35021:CDS |
| TCTGCCGGCGGTGGAAATGG+AGG | 0.568541 | 4.4:-20818284 | MS.gene35021:CDS |
| CGACAGTATACATCAAGAAG+TGG | 0.568986 | 4.4:-20806233 | MS.gene35021:CDS |
| GTTGTAGCTATGGTTGGTGA+TGG | 0.572009 | 4.4:-20804153 | MS.gene35021:CDS |
| CGTAGAAGTACAAGAGGGAG+AGG | 0.572760 | 4.4:+20818403 | None:intergenic |
| AGAAGCTCCTATACAACGGT+TGG | 0.574084 | 4.4:-20811255 | MS.gene35021:CDS |
| ACCTATATGTGAAGAAGCCA+GGG | 0.574147 | 4.4:+20804113 | None:intergenic |
| TCAAATTCAGTACATCCAGT+TGG | 0.574774 | 4.4:-20808444 | MS.gene35021:CDS |
| AGAAGAACCAAAAGAAGCAG+CGG | 0.577913 | 4.4:+20818304 | None:intergenic |
| GTAGCGGGATACTTCACGTA+TGG | 0.578462 | 4.4:-20809547 | MS.gene35021:CDS |
| TGTCTGATATTGAAGTTCTG+AGG | 0.581350 | 4.4:-20808485 | MS.gene35021:CDS |
| TGTTAGGGAATGGTGTGTGG+TGG | 0.581724 | 4.4:-20818030 | MS.gene35021:intron |
| GAAACGCAGCGCTTACGGCA+CGG | 0.582136 | 4.4:+20818332 | None:intergenic |
| TGAGTTAGTCATTACGCCAA+TGG | 0.583328 | 4.4:+20802109 | None:intergenic |
| GGTTTCAATTCTTGCCTCCG+TGG | 0.583614 | 4.4:-20817633 | MS.gene35021:intron |
| AAAACAGGGACCCTCACGAT+TGG | 0.587026 | 4.4:-20808848 | MS.gene35021:CDS |
| TACAATAGAAGACACCTCAC+TGG | 0.591367 | 4.4:+20804062 | None:intergenic |
| GAACAGCTTAGTTGGTCTTG+GGG | 0.592009 | 4.4:-20815606 | MS.gene35021:CDS |
| AGGAACACGGAATGCGGGAA+CGG | 0.593090 | 4.4:+20818423 | None:intergenic |
| GGTGGTGGTAGTGGTTCTGG+TGG | 0.594008 | 4.4:-20818236 | MS.gene35021:CDS |
| CACACTCCAAAACGTAAATG+TGG | 0.594060 | 4.4:+20809504 | None:intergenic |
| CCTCATTATTAACTAGAAGG+CGG | 0.594277 | 4.4:+20812616 | None:intergenic |
| GGTGCTGGAGTTGGAAATGG+AGG | 0.596153 | 4.4:-20818263 | MS.gene35021:CDS |
| GAATGAAATGCATGAATCCA+TGG | 0.596916 | 4.4:+20815731 | None:intergenic |
| CATTTGTGTATCCAGGTAGC+GGG | 0.597315 | 4.4:-20809562 | MS.gene35021:intron |
| TCTGGTGGTGAGTCTGGAGA+TGG | 0.597845 | 4.4:-20818221 | MS.gene35021:CDS |
| ACATGAGAACCTTAGCGTCA+TGG | 0.601255 | 4.4:+20808385 | None:intergenic |
| GATGCACAATCATCTGTCGC+AGG | 0.602129 | 4.4:-20804037 | MS.gene35021:intron |
| CTGTCGTGTTTGACAAAACA+GGG | 0.602712 | 4.4:-20808862 | MS.gene35021:CDS |
| CAGGGCGTTTGAGGTTGTGG+CGG | 0.604275 | 4.4:+20818462 | None:intergenic |
| GTTTGTTAGGGAATGGTGTG+TGG | 0.604721 | 4.4:-20818033 | MS.gene35021:intron |
| TGCAATTGATGGAGTCAGCA+TGG | 0.605507 | 4.4:+20802154 | None:intergenic |
| CATTCTAGAGAAGTTTGCCA+TGG | 0.606326 | 4.4:-20808891 | MS.gene35021:CDS |
| GTGGTGACAAAGATTGTCAC+GGG | 0.608754 | 4.4:-20808818 | MS.gene35021:CDS |
| GAGGTGCTCCGGAGAAATGA+CGG | 0.610156 | 4.4:+20818498 | None:intergenic |
| TGTTGGGATTCCCAAAGCCA+AGG | 0.610517 | 4.4:-20806029 | MS.gene35021:intron |
| GTGGCTAACCCTAGTGCACA+AGG | 0.611590 | 4.4:+20809055 | None:intergenic |
| GCTGATGGAATTGTGAGAGC+TGG | 0.616792 | 4.4:-20812120 | MS.gene35021:CDS |
| TAGATGAGTCAAGTTTCACC+GGG | 0.617924 | 4.4:-20812086 | MS.gene35021:CDS |
| AAAGCAACCAGTGATATGAC+AGG | 0.619329 | 4.4:-20812666 | MS.gene35021:CDS |
| GCCAGTAACAAAAGAACTTG+GGG | 0.625890 | 4.4:-20812055 | MS.gene35021:intron |
| GTACAAGAGGGAGAGGAACA+CGG | 0.629414 | 4.4:+20818410 | None:intergenic |
| TGTGGTGACAAAGATTGTCA+CGG | 0.636439 | 4.4:-20808819 | MS.gene35021:CDS |
| GAACTCTTACAATAGAGGTA+CGG | 0.640267 | 4.4:-20811340 | MS.gene35021:CDS |
| AGCCAGATCAGATTCAACAT+AGG | 0.640347 | 4.4:+20802019 | None:intergenic |
| CCACAGGTTTACCAATCGTG+AGG | 0.644937 | 4.4:+20808837 | None:intergenic |
| TAACGGCGTAGAAGTACAAG+AGG | 0.646456 | 4.4:+20818397 | None:intergenic |
| GGTTGTGGCGGAGGAGTGTG+CGG | 0.647982 | 4.4:+20818474 | None:intergenic |
| ACAGGTTGGAACTTCTTTGG+GGG | 0.648222 | 4.4:-20808945 | MS.gene35021:intron |
| GCTGACTCCATCAATTGCAG+GGG | 0.650970 | 4.4:-20802150 | MS.gene35021:CDS |
| TCTTTGCCGCAAAGGCACCA+TGG | 0.652332 | 4.4:-20815748 | MS.gene35021:CDS |
| CACAGGTTTACCAATCGTGA+GGG | 0.653458 | 4.4:+20808838 | None:intergenic |
| TCAACAGAAAGACTGTCAGA+AGG | 0.654256 | 4.4:+20812564 | None:intergenic |
| ACACTAGCAGATGACACTTG+TGG | 0.655705 | 4.4:+20817765 | None:intergenic |
| GGACATTGGAATGGATAACC+AGG | 0.658325 | 4.4:-20807961 | MS.gene35021:intron |
| GCTATCTGAAGTGAAGCCAG+AGG | 0.659758 | 4.4:-20804217 | MS.gene35021:CDS |
| TGCGATAACCGTCACCACGA+CGG | 0.665901 | 4.4:-20818549 | MS.gene35021:CDS |
| ATGGCAATTAACTGCCTGAG+CGG | 0.670264 | 4.4:+20808404 | None:intergenic |
| GATGTGCAGCATCTGTGAAG+AGG | 0.673377 | 4.4:-20818008 | MS.gene35021:CDS |
| AAGTAGCATCTGCGCCGTCG+TGG | 0.674934 | 4.4:+20818535 | None:intergenic |
| AGGTGTTGGAGCTGCCAGTG+AGG | 0.679835 | 4.4:-20804076 | MS.gene35021:CDS |
| AAGTAATGTAAGCAAACACA+AGG | 0.687015 | 4.4:+20815691 | None:intergenic |
| CCTCACGATTGGTAAACCTG+TGG | 0.691288 | 4.4:-20808837 | MS.gene35021:CDS |
| GTAGAGAAGCTCCTATACAA+CGG | 0.692471 | 4.4:-20811259 | MS.gene35021:CDS |
| GGTTGTTGTAGGAAGTAACA+GGG | 0.716557 | 4.4:+20818444 | None:intergenic |
| TGGCGGAGGAGTGTGCGGTG+AGG | 0.719500 | 4.4:+20818479 | None:intergenic |
| GTGTTCGTAAGAGCAGCGCG+CGG | 0.723251 | 4.4:+20818354 | None:intergenic |
| AACGGCGTAGAAGTACAAGA+GGG | 0.727611 | 4.4:+20818398 | None:intergenic |
| AAACACGACAGTATTTACCA+TGG | 0.731349 | 4.4:+20808874 | None:intergenic |
| ATAGAGGTACGGAGACCAGG+TGG | 0.764341 | 4.4:-20811329 | MS.gene35021:CDS |
| AGCTTGAAAATATACCACGG+AGG | 0.776401 | 4.4:+20817619 | None:intergenic |
| AGATGAGTCAAGTTTCACCG+GGG | 0.813471 | 4.4:-20812085 | MS.gene35021:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20801986 | 20818579 | 20801986 | ID=MS.gene35021 |
| chr4.4 | mRNA | 20801986 | 20818579 | 20801986 | ID=MS.gene35021.t1;Parent=MS.gene35021 |
| chr4.4 | exon | 20818145 | 20818579 | 20818145 | ID=MS.gene35021.t1.exon1;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20818145 | 20818579 | 20818145 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20817993 | 20818046 | 20817993 | ID=MS.gene35021.t1.exon2;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20817993 | 20818046 | 20817993 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20817634 | 20817787 | 20817634 | ID=MS.gene35021.t1.exon3;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20817634 | 20817787 | 20817634 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20815960 | 20816034 | 20815960 | ID=MS.gene35021.t1.exon4;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20815960 | 20816034 | 20815960 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20815556 | 20815833 | 20815556 | ID=MS.gene35021.t1.exon5;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20815556 | 20815833 | 20815556 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20812539 | 20812772 | 20812539 | ID=MS.gene35021.t1.exon6;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20812539 | 20812772 | 20812539 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20812056 | 20812154 | 20812056 | ID=MS.gene35021.t1.exon7;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20812056 | 20812154 | 20812056 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20811247 | 20811396 | 20811247 | ID=MS.gene35021.t1.exon8;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20811247 | 20811396 | 20811247 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20809423 | 20809569 | 20809423 | ID=MS.gene35021.t1.exon9;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20809423 | 20809569 | 20809423 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20809039 | 20809089 | 20809039 | ID=MS.gene35021.t1.exon10;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20809039 | 20809089 | 20809039 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20808791 | 20808963 | 20808791 | ID=MS.gene35021.t1.exon11;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20808791 | 20808963 | 20808791 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20808395 | 20808527 | 20808395 | ID=MS.gene35021.t1.exon12;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20808395 | 20808527 | 20808395 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20807962 | 20808059 | 20807962 | ID=MS.gene35021.t1.exon13;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20807962 | 20808059 | 20807962 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20806030 | 20806267 | 20806030 | ID=MS.gene35021.t1.exon14;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20806030 | 20806267 | 20806030 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20804038 | 20804241 | 20804038 | ID=MS.gene35021.t1.exon15;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20804038 | 20804241 | 20804038 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20802992 | 20803072 | 20802992 | ID=MS.gene35021.t1.exon16;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20802992 | 20803072 | 20802992 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| chr4.4 | exon | 20801986 | 20802222 | 20801986 | ID=MS.gene35021.t1.exon17;Parent=MS.gene35021.t1 |
| chr4.4 | CDS | 20801986 | 20802222 | 20801986 | ID=cds.MS.gene35021.t1;Parent=MS.gene35021.t1 |
| Gene Sequence |
| Protein sequence |
