Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39421.t1 | XP_013457084.1 | 94.3 | 193 | 11 | 0 | 1 | 193 | 1 | 193 | 6.30E-40 | 174.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39421.t1 | I3STZ6 | 94.3 | 193 | 11 | 0 | 1 | 193 | 1 | 193 | 4.5e-40 | 174.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene39421 | 0.81508 | 1.11E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene39421 | 0.899373 | 2.11E-77 | -1.69E-46 |
| MS.gene049173 | MS.gene39421 | 0.835281 | 1.84E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene39421 | 0.891885 | 2.64E-74 | -1.69E-46 |
| MS.gene049222 | MS.gene39421 | 0.918343 | 1.75E-86 | -1.69E-46 |
| MS.gene049232 | MS.gene39421 | 0.875032 | 4.24E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene39421 | 0.919317 | 5.24E-87 | -1.69E-46 |
| MS.gene049320 | MS.gene39421 | 0.929122 | 1.09E-92 | -1.69E-46 |
| MS.gene049369 | MS.gene39421 | 0.802872 | 4.56E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene39421 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene39421 | 0.817187 | 3.76E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene39421 | 0.896657 | 2.99E-76 | -1.69E-46 |
| MS.gene049615 | MS.gene39421 | 0.835443 | 1.67E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene39421 | 0.829404 | 5.25E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene39421 | 0.890199 | 1.22E-73 | -1.69E-46 |
| MS.gene049805 | MS.gene39421 | 0.853453 | 2.37E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene39421 | 0.895479 | 9.22E-76 | -1.69E-46 |
| MS.gene050163 | MS.gene39421 | 0.90255 | 8.65E-79 | -1.69E-46 |
| MS.gene050165 | MS.gene39421 | 0.890746 | 7.46E-74 | -1.69E-46 |
| MS.gene050170 | MS.gene39421 | 0.837068 | 6.46E-57 | -1.69E-46 |
| MS.gene050216 | MS.gene39421 | 0.846044 | 2.78E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene39421 | 0.86134 | 1.10E-63 | -1.69E-46 |
| MS.gene050333 | MS.gene39421 | 0.877741 | 4.93E-69 | -1.69E-46 |
| MS.gene050353 | MS.gene39421 | -0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene39421 | -0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene39421 | 0.817765 | 2.78E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene39421 | 0.822316 | 2.53E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene39421 | 0.856897 | 2.36E-62 | -1.69E-46 |
| MS.gene050504 | MS.gene39421 | 0.917476 | 5.07E-86 | -1.69E-46 |
| MS.gene050518 | MS.gene39421 | 0.929061 | 1.19E-92 | -1.69E-46 |
| MS.gene050520 | MS.gene39421 | 0.850592 | 1.54E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene39421 | 0.850814 | 1.33E-60 | -1.69E-46 |
| MS.gene050577 | MS.gene39421 | 0.866117 | 3.60E-65 | -1.69E-46 |
| MS.gene050593 | MS.gene39421 | 0.88669 | 2.75E-72 | -1.69E-46 |
| MS.gene050612 | MS.gene39421 | 0.922142 | 1.44E-88 | -1.69E-46 |
| MS.gene050647 | MS.gene39421 | -0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene050662 | MS.gene39421 | 0.869315 | 3.39E-66 | -1.69E-46 |
| MS.gene050675 | MS.gene39421 | 0.921167 | 5.06E-88 | -1.69E-46 |
| MS.gene050686 | MS.gene39421 | 0.851442 | 8.85E-61 | -1.69E-46 |
| MS.gene050690 | MS.gene39421 | 0.821263 | 4.43E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene39421 | 0.918397 | 1.64E-86 | -1.69E-46 |
| MS.gene050747 | MS.gene39421 | 0.880474 | 5.33E-70 | -1.69E-46 |
| MS.gene050767 | MS.gene39421 | 0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene39421 | 0.808766 | 2.64E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene39421 | 0.923349 | 2.99E-89 | -1.69E-46 |
| MS.gene05080 | MS.gene39421 | 0.902992 | 5.50E-79 | -1.69E-46 |
| MS.gene05081 | MS.gene39421 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene39421 | 0.885023 | 1.16E-71 | -1.69E-46 |
| MS.gene050871 | MS.gene39421 | 0.883728 | 3.51E-71 | -1.69E-46 |
| MS.gene050876 | MS.gene39421 | 0.837573 | 4.80E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene39421 | 0.832001 | 1.21E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene39421 | 0.881597 | 2.10E-70 | -1.69E-46 |
| MS.gene050986 | MS.gene39421 | 0.917189 | 7.18E-86 | -1.69E-46 |
| MS.gene05100 | MS.gene39421 | 0.844189 | 8.82E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene39421 | -0.801371 | 9.29E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene39421 | 0.823228 | 1.55E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene39421 | -0.813582 | 2.38E-51 | -1.69E-46 |
| MS.gene051167 | MS.gene39421 | -0.826391 | 2.78E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene39421 | 0.867272 | 1.55E-65 | -1.69E-46 |
| MS.gene051268 | MS.gene39421 | 0.82578 | 3.89E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene39421 | 0.870744 | 1.16E-66 | -1.69E-46 |
| MS.gene051387 | MS.gene39421 | 0.852203 | 5.39E-61 | -1.69E-46 |
| MS.gene05141 | MS.gene39421 | -0.805215 | 1.49E-49 | -1.69E-46 |
| MS.gene051434 | MS.gene39421 | 0.812652 | 3.81E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene39421 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene39421 | 0.884092 | 2.58E-71 | -1.69E-46 |
| MS.gene051617 | MS.gene39421 | 0.836124 | 1.12E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene39421 | 0.865714 | 4.83E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene39421 | 0.800965 | 1.13E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene39421 | 0.86047 | 2.02E-63 | -1.69E-46 |
| MS.gene051734 | MS.gene39421 | 0.818531 | 1.87E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene39421 | 0.905435 | 4.31E-80 | -1.69E-46 |
| MS.gene051838 | MS.gene39421 | 0.843381 | 1.45E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene39421 | 0.875675 | 2.56E-68 | -1.69E-46 |
| MS.gene051874 | MS.gene39421 | 0.832109 | 1.14E-55 | -1.69E-46 |
| MS.gene051949 | MS.gene39421 | 0.858307 | 9.01E-63 | -1.69E-46 |
| MS.gene052164 | MS.gene39421 | 0.866618 | 2.50E-65 | -1.69E-46 |
| MS.gene052271 | MS.gene39421 | 0.872153 | 3.96E-67 | -1.69E-46 |
| MS.gene052379 | MS.gene39421 | 0.861269 | 1.16E-63 | -1.69E-46 |
| MS.gene052482 | MS.gene39421 | 0.841187 | 5.53E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene39421 | 0.830909 | 2.25E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene39421 | 0.845341 | 4.31E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene39421 | 0.841531 | 4.49E-58 | -1.69E-46 |
| MS.gene052504 | MS.gene39421 | 0.855818 | 4.89E-62 | -1.69E-46 |
| MS.gene052506 | MS.gene39421 | 0.887405 | 1.47E-72 | -1.69E-46 |
| MS.gene052508 | MS.gene39421 | 0.805804 | 1.12E-49 | -1.69E-46 |
| MS.gene052510 | MS.gene39421 | 0.833019 | 6.78E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene39421 | 0.883512 | 4.21E-71 | -1.69E-46 |
| MS.gene052670 | MS.gene39421 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene052805 | MS.gene39421 | -0.811078 | 8.38E-51 | -1.69E-46 |
| MS.gene052820 | MS.gene39421 | 0.845902 | 3.04E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene39421 | 0.891883 | 2.64E-74 | -1.69E-46 |
| MS.gene052823 | MS.gene39421 | 0.828533 | 8.53E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene39421 | 0.830456 | 2.91E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene39421 | 0.836806 | 7.54E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene39421 | 0.843047 | 1.78E-58 | -1.69E-46 |
| MS.gene052916 | MS.gene39421 | 0.861874 | 7.55E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene39421 | 0.892096 | 2.17E-74 | -1.69E-46 |
| MS.gene053009 | MS.gene39421 | 0.87704 | 8.64E-69 | -1.69E-46 |
| MS.gene053018 | MS.gene39421 | 0.810273 | 1.25E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene39421 | 0.854892 | 9.09E-62 | -1.69E-46 |
| MS.gene053107 | MS.gene39421 | 0.838054 | 3.61E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene39421 | 0.904223 | 1.54E-79 | -1.69E-46 |
| MS.gene053207 | MS.gene39421 | 0.918938 | 8.40E-87 | -1.69E-46 |
| MS.gene053213 | MS.gene39421 | 0.919266 | 5.58E-87 | -1.69E-46 |
| MS.gene053284 | MS.gene39421 | 0.803971 | 2.70E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene39421 | 0.917411 | 5.48E-86 | -1.69E-46 |
| MS.gene053322 | MS.gene39421 | 0.845306 | 4.41E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene39421 | -0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene39421 | 0.863131 | 3.10E-64 | -1.69E-46 |
| MS.gene053449 | MS.gene39421 | 0.808166 | 3.54E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene39421 | 0.85427 | 1.38E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene39421 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene39421 | -0.831048 | 2.08E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene39421 | 0.904632 | 1.00E-79 | -1.69E-46 |
| MS.gene053626 | MS.gene39421 | 0.860972 | 1.42E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene39421 | 0.889306 | 2.72E-73 | -1.69E-46 |
| MS.gene053633 | MS.gene39421 | 0.819841 | 9.40E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene39421 | 0.809554 | 1.79E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene39421 | 0.875674 | 2.56E-68 | -1.69E-46 |
| MS.gene053916 | MS.gene39421 | 0.878912 | 1.91E-69 | -1.69E-46 |
| MS.gene054003 | MS.gene39421 | 0.845045 | 5.19E-59 | -1.69E-46 |
| MS.gene054376 | MS.gene39421 | 0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene054408 | MS.gene39421 | 0.82608 | 3.30E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene39421 | 0.884028 | 2.72E-71 | -1.69E-46 |
| MS.gene054600 | MS.gene39421 | 0.906667 | 1.16E-80 | -1.69E-46 |
| MS.gene054642 | MS.gene39421 | 0.92303 | 4.54E-89 | -1.69E-46 |
| MS.gene054706 | MS.gene39421 | -0.816857 | 4.46E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene39421 | 0.84107 | 5.94E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene39421 | 0.856804 | 2.51E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene39421 | 0.818076 | 2.37E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene39421 | 0.907812 | 3.38E-81 | -1.69E-46 |
| MS.gene05505 | MS.gene39421 | 0.847226 | 1.32E-59 | -1.69E-46 |
| MS.gene055154 | MS.gene39421 | -0.834102 | 3.64E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene39421 | 0.897277 | 1.64E-76 | -1.69E-46 |
| MS.gene055212 | MS.gene39421 | 0.804341 | 2.26E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene39421 | 0.863424 | 2.51E-64 | -1.69E-46 |
| MS.gene055289 | MS.gene39421 | 0.851513 | 8.45E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene39421 | 0.918216 | 2.05E-86 | -1.69E-46 |
| MS.gene055397 | MS.gene39421 | 0.831409 | 1.70E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene39421 | 0.846097 | 2.69E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene39421 | 0.907735 | 3.67E-81 | -1.69E-46 |
| MS.gene055577 | MS.gene39421 | 0.932306 | 1.04E-94 | -1.69E-46 |
| MS.gene055620 | MS.gene39421 | 0.804657 | 1.94E-49 | -1.69E-46 |
| MS.gene055634 | MS.gene39421 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene39421 | 0.853356 | 2.52E-61 | -1.69E-46 |
| MS.gene055638 | MS.gene39421 | 0.848973 | 4.35E-60 | -1.69E-46 |
| MS.gene055647 | MS.gene39421 | 0.876756 | 1.08E-68 | -1.69E-46 |
| MS.gene055722 | MS.gene39421 | 0.904652 | 9.82E-80 | -1.69E-46 |
| MS.gene055748 | MS.gene39421 | 0.875872 | 2.19E-68 | -1.69E-46 |
| MS.gene055750 | MS.gene39421 | 0.883862 | 3.13E-71 | -1.69E-46 |
| MS.gene055751 | MS.gene39421 | 0.876656 | 1.17E-68 | -1.69E-46 |
| MS.gene055776 | MS.gene39421 | 0.851286 | 9.80E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene39421 | 0.834459 | 2.96E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene39421 | 0.908161 | 2.31E-81 | -1.69E-46 |
| MS.gene055941 | MS.gene39421 | 0.88533 | 8.93E-72 | -1.69E-46 |
| MS.gene055956 | MS.gene39421 | -0.823863 | 1.10E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene39421 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene056083 | MS.gene39421 | 0.878887 | 1.95E-69 | -1.69E-46 |
| MS.gene056166 | MS.gene39421 | 0.809724 | 1.64E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene39421 | 0.901433 | 2.69E-78 | -1.69E-46 |
| MS.gene056409 | MS.gene39421 | 0.8315 | 1.61E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene39421 | 0.82368 | 1.22E-53 | -1.69E-46 |
| MS.gene056446 | MS.gene39421 | 0.805779 | 1.13E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene39421 | 0.819223 | 1.30E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene39421 | 0.820596 | 6.31E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene39421 | 0.817879 | 2.62E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene39421 | 0.87395 | 9.88E-68 | -1.69E-46 |
| MS.gene056510 | MS.gene39421 | 0.912371 | 2.10E-83 | -1.69E-46 |
| MS.gene056511 | MS.gene39421 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene39421 | 0.828522 | 8.58E-55 | -1.69E-46 |
| MS.gene056550 | MS.gene39421 | -0.813578 | 2.39E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene39421 | 0.835611 | 1.52E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene39421 | 0.812374 | 4.38E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene39421 | 0.91422 | 2.48E-84 | -1.69E-46 |
| MS.gene05666 | MS.gene39421 | 0.837623 | 4.66E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene39421 | 0.863589 | 2.23E-64 | -1.69E-46 |
| MS.gene056878 | MS.gene39421 | 0.818627 | 1.78E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene39421 | 0.821138 | 4.73E-53 | -1.69E-46 |
| MS.gene056898 | MS.gene39421 | 0.825813 | 3.82E-54 | -1.69E-46 |
| MS.gene056947 | MS.gene39421 | 0.835583 | 1.54E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene39421 | 0.8252 | 5.34E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene39421 | 0.865252 | 6.76E-65 | -1.69E-46 |
| MS.gene057086 | MS.gene39421 | 0.831851 | 1.32E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene39421 | 0.876517 | 1.31E-68 | -1.69E-46 |
| MS.gene057146 | MS.gene39421 | 0.819031 | 1.44E-52 | -1.69E-46 |
| MS.gene057246 | MS.gene39421 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene39421 | 0.921903 | 1.97E-88 | -1.69E-46 |
| MS.gene057332 | MS.gene39421 | 0.820991 | 5.12E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene39421 | 0.818686 | 1.72E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene39421 | 0.905558 | 3.78E-80 | -1.69E-46 |
| MS.gene057658 | MS.gene39421 | 0.838121 | 3.47E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene39421 | 0.843323 | 1.50E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene39421 | 0.861992 | 6.94E-64 | -1.69E-46 |
| MS.gene057856 | MS.gene39421 | 0.812082 | 5.07E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene39421 | 0.823018 | 1.74E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene39421 | 0.815083 | 1.11E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene39421 | 0.860915 | 1.48E-63 | -1.69E-46 |
| MS.gene058006 | MS.gene39421 | 0.819731 | 9.96E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene39421 | 0.853707 | 2.00E-61 | -1.69E-46 |
| MS.gene058130 | MS.gene39421 | 0.858614 | 7.30E-63 | -1.69E-46 |
| MS.gene058323 | MS.gene39421 | 0.877067 | 8.46E-69 | -1.69E-46 |
| MS.gene058334 | MS.gene39421 | -0.815182 | 1.05E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene39421 | 0.850035 | 2.20E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene39421 | 0.884322 | 2.12E-71 | -1.69E-46 |
| MS.gene058419 | MS.gene39421 | 0.918761 | 1.05E-86 | -1.69E-46 |
| MS.gene058544 | MS.gene39421 | 0.883336 | 4.89E-71 | -1.69E-46 |
| MS.gene058723 | MS.gene39421 | 0.898784 | 3.78E-77 | -1.69E-46 |
| MS.gene058773 | MS.gene39421 | 0.91981 | 2.82E-87 | -1.69E-46 |
| MS.gene058838 | MS.gene39421 | 0.858725 | 6.76E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene39421 | 0.843302 | 1.52E-58 | -1.69E-46 |
| MS.gene058840 | MS.gene39421 | -0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene39421 | -0.817885 | 2.61E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene39421 | 0.909866 | 3.55E-82 | -1.69E-46 |
| MS.gene059023 | MS.gene39421 | 0.892649 | 1.31E-74 | -1.69E-46 |
| MS.gene059029 | MS.gene39421 | 0.875467 | 3.01E-68 | -1.69E-46 |
| MS.gene059079 | MS.gene39421 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene39421 | 0.861723 | 8.40E-64 | -1.69E-46 |
| MS.gene059181 | MS.gene39421 | 0.819254 | 1.28E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene39421 | 0.812224 | 4.72E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene39421 | 0.865426 | 5.96E-65 | -1.69E-46 |
| MS.gene059367 | MS.gene39421 | 0.854845 | 9.38E-62 | -1.69E-46 |
| MS.gene059368 | MS.gene39421 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene39421 | 0.836477 | 9.14E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene39421 | 0.814189 | 1.75E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene39421 | 0.915472 | 5.66E-85 | -1.69E-46 |
| MS.gene059680 | MS.gene39421 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene39421 | 0.821104 | 4.82E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene39421 | 0.919584 | 3.75E-87 | -1.69E-46 |
| MS.gene059756 | MS.gene39421 | 0.882908 | 7.02E-71 | -1.69E-46 |
| MS.gene059801 | MS.gene39421 | 0.839366 | 1.65E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene39421 | 0.901216 | 3.35E-78 | -1.69E-46 |
| MS.gene059902 | MS.gene39421 | 0.872549 | 2.92E-67 | -1.69E-46 |
| MS.gene059960 | MS.gene39421 | 0.852836 | 3.55E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene39421 | 0.819472 | 1.14E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene39421 | 0.857499 | 1.57E-62 | -1.69E-46 |
| MS.gene060341 | MS.gene39421 | 0.80905 | 2.29E-50 | -1.69E-46 |
| MS.gene060356 | MS.gene39421 | 0.811195 | 7.91E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene39421 | 0.876641 | 1.19E-68 | -1.69E-46 |
| MS.gene060703 | MS.gene39421 | 0.851994 | 6.18E-61 | -1.69E-46 |
| MS.gene060728 | MS.gene39421 | 0.832279 | 1.03E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene39421 | 0.882746 | 8.04E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene39421 | 0.828015 | 1.14E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene39421 | 0.884139 | 2.48E-71 | -1.69E-46 |
| MS.gene060804 | MS.gene39421 | 0.860828 | 1.57E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene39421 | 0.835564 | 1.56E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene39421 | 0.871975 | 4.54E-67 | -1.69E-46 |
| MS.gene060837 | MS.gene39421 | 0.848446 | 6.10E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene39421 | 0.899505 | 1.85E-77 | -1.69E-46 |
| MS.gene060982 | MS.gene39421 | 0.880727 | 4.33E-70 | -1.69E-46 |
| MS.gene061041 | MS.gene39421 | 0.817937 | 2.55E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene39421 | 0.849793 | 2.57E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene39421 | 0.897704 | 1.09E-76 | -1.69E-46 |
| MS.gene061171 | MS.gene39421 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene39421 | 0.871464 | 6.70E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39421.t1 | MTR_4g089080 | 96.891 | 193 | 6 | 0 | 1 | 193 | 1 | 193 | 4.05e-133 | 371 |
| MS.gene39421.t1 | MTR_3g026020 | 40.000 | 175 | 92 | 4 | 25 | 191 | 18 | 187 | 8.25e-21 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39421.t1 | AT1G74730 | 64.062 | 192 | 67 | 2 | 3 | 193 | 8 | 198 | 2.27e-65 | 199 |
| MS.gene39421.t1 | AT5G08050 | 40.000 | 125 | 67 | 2 | 72 | 193 | 39 | 158 | 6.15e-15 | 69.3 |
Find 47 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGGTGTTGGGGCTGTT+GGG | 0.261115 | 4.2:+21888548 | MS.gene39421:CDS |
| TGCGGTCTCTCCTTCCGTTT+TGG | 0.280512 | 4.2:+21888423 | MS.gene39421:CDS |
| GCTCTTGGTGTTGGGGCTGT+TGG | 0.285475 | 4.2:+21888547 | MS.gene39421:CDS |
| TTGCTGCTGCTCTTGGTGTT+GGG | 0.287275 | 4.2:+21888539 | MS.gene39421:CDS |
| TCTGTCACTTCCGACGCTTT+TGG | 0.320526 | 4.2:+21888450 | MS.gene39421:CDS |
| AAAGACGGTGAAAGGTTTAT+TGG | 0.327341 | 4.2:-21888046 | None:intergenic |
| GTTGCTGCTGCTCTTGGTGT+TGG | 0.359407 | 4.2:+21888538 | MS.gene39421:CDS |
| TGAACAAGTACAACGATAAC+TGG | 0.365581 | 4.2:+21888176 | MS.gene39421:CDS |
| GCTGTTGTTGCTGCTGCTCT+TGG | 0.375504 | 4.2:+21888532 | MS.gene39421:CDS |
| GGGGCTGTTGGGTTGTTCGC+TGG | 0.385149 | 4.2:+21888559 | MS.gene39421:CDS |
| TTATCCAAAGCTGAAGAATT+CGG | 0.394470 | 4.2:+21888316 | MS.gene39421:CDS |
| GACGCCGAATTCTTCAGCTT+TGG | 0.394886 | 4.2:-21888320 | None:intergenic |
| TTCGCTGGATCTGTTGTTCT+CGG | 0.420848 | 4.2:+21888574 | MS.gene39421:CDS |
| CTGGATCTGTTGTTCTCGGC+GGG | 0.425729 | 4.2:+21888578 | MS.gene39421:CDS |
| TGCTGCTGCTCTTGGTGTTG+GGG | 0.441410 | 4.2:+21888540 | MS.gene39421:CDS |
| AAAGGTTTATTGGAGGAAGT+AGG | 0.473704 | 4.2:-21888036 | None:intergenic |
| AAGGTTTATTGGAGGAAGTA+GGG | 0.490170 | 4.2:-21888035 | None:intergenic |
| AACTGGAAGAAACAATGGTT+CGG | 0.517807 | 4.2:+21888193 | MS.gene39421:CDS |
| ACCTTTCACCGTCTTTGCCA+TGG | 0.518610 | 4.2:+21888053 | MS.gene39421:CDS |
| TACCGCTCTTGTTGTAGTAC+AGG | 0.524783 | 4.2:+21888510 | MS.gene39421:CDS |
| AAGAAACAATGGTTCGGAGC+AGG | 0.525520 | 4.2:+21888199 | MS.gene39421:CDS |
| TGGAGAGCTGAAGTTGGAGC+AGG | 0.527987 | 4.2:-21887961 | None:intergenic |
| ACAAGAGCGGTAGTATCATC+AGG | 0.531633 | 4.2:-21888499 | None:intergenic |
| AGCGATAGTGACGGAGGGTG+CGG | 0.535126 | 4.2:-21888008 | None:intergenic |
| TTTGGGAGCCATGGCAAAGA+CGG | 0.549608 | 4.2:-21888061 | None:intergenic |
| GACGGTGAAAGGTTTATTGG+AGG | 0.550094 | 4.2:-21888043 | None:intergenic |
| TGAAGATGGAGAGCTGAAGT+TGG | 0.551350 | 4.2:-21887967 | None:intergenic |
| AAGTGACAGAGAAGCCAAAA+CGG | 0.551577 | 4.2:-21888437 | None:intergenic |
| GCCATGGCAAAGACGGTGAA+AGG | 0.551635 | 4.2:-21888054 | None:intergenic |
| AGGAAGCGAAGAAGTAGAAG+TGG | 0.553396 | 4.2:+21888234 | MS.gene39421:CDS |
| CTCTCTTCAATCGAGAAACT+AGG | 0.554038 | 4.2:+21888346 | MS.gene39421:CDS |
| GACAGAGAAGCCAAAACGGA+AGG | 0.555736 | 4.2:-21888433 | None:intergenic |
| GGAGGGTGCGGTGGTTAGTG+TGG | 0.562291 | 4.2:-21887996 | None:intergenic |
| TTTGGCTGCTGTTGCGACGG+TGG | 0.563007 | 4.2:+21888468 | MS.gene39421:CDS |
| TAGTGTGGATGTGTTGAAGA+TGG | 0.568146 | 4.2:-21887981 | None:intergenic |
| TGTTCTCGGCGGGTTGCAAG+AGG | 0.570576 | 4.2:+21888588 | MS.gene39421:CDS |
| AGTTGGAGCAGGAACAGCCA+TGG | 0.616976 | 4.2:-21887950 | None:intergenic |
| ACGATAACTGGAAGAAACAA+TGG | 0.622411 | 4.2:+21888188 | MS.gene39421:CDS |
| GATAGTGACGGAGGGTGCGG+TGG | 0.630396 | 4.2:-21888005 | None:intergenic |
| TAGGGAATGAGCGATAGTGA+CGG | 0.635156 | 4.2:-21888017 | None:intergenic |
| GCAACAGCAGCCAAAAGCGT+CGG | 0.640980 | 4.2:-21888460 | None:intergenic |
| GGAATGAGCGATAGTGACGG+AGG | 0.658654 | 4.2:-21888014 | None:intergenic |
| GCTGGATCTGTTGTTCTCGG+CGG | 0.659281 | 4.2:+21888577 | MS.gene39421:CDS |
| GAATGAGCGATAGTGACGGA+GGG | 0.663461 | 4.2:-21888013 | None:intergenic |
| GGAGCAGGAATATTCTACGA+AGG | 0.698664 | 4.2:+21888214 | MS.gene39421:CDS |
| AGCCTGTACTACAACAAGAG+CGG | 0.708420 | 4.2:-21888512 | None:intergenic |
| CTTATTAGAGAAACTCGCTG+CGG | 0.756406 | 4.2:+21888405 | MS.gene39421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGAATTTATGTTAA+TGG | + | chr4.2:21888143-21888162 | MS.gene39421:intron | 10.0% |
| !! | AAATAATTACGAAAATGATG+AGG | - | chr4.2:21888109-21888128 | None:intergenic | 20.0% |
| !!! | TGAATTTATGTTAATGGATA+TGG | + | chr4.2:21888149-21888168 | MS.gene39421:intron | 20.0% |
| !! | TTTATGTTAATGGATATGGA+AGG | + | chr4.2:21888153-21888172 | MS.gene39421:intron | 25.0% |
| TTATCCAAAGCTGAAGAATT+CGG | + | chr4.2:21888316-21888335 | MS.gene39421:CDS | 30.0% | |
| ! | TGTGTATGTACCTTCTTTTT+GGG | - | chr4.2:21888081-21888100 | None:intergenic | 30.0% |
| ! | TTGTGTATGTACCTTCTTTT+TGG | - | chr4.2:21888082-21888101 | None:intergenic | 30.0% |
| !!! | GAAACTAGGACTTTTTTCTA+AGG | + | chr4.2:21888360-21888379 | MS.gene39421:CDS | 30.0% |
| AAAGACGGTGAAAGGTTTAT+TGG | - | chr4.2:21888049-21888068 | None:intergenic | 35.0% | |
| AAAGGTTTATTGGAGGAAGT+AGG | - | chr4.2:21888039-21888058 | None:intergenic | 35.0% | |
| AACTGGAAGAAACAATGGTT+CGG | + | chr4.2:21888193-21888212 | MS.gene39421:CDS | 35.0% | |
| AAGGTTTATTGGAGGAAGTA+GGG | - | chr4.2:21888038-21888057 | None:intergenic | 35.0% | |
| ACGATAACTGGAAGAAACAA+TGG | + | chr4.2:21888188-21888207 | MS.gene39421:CDS | 35.0% | |
| TGAACAAGTACAACGATAAC+TGG | + | chr4.2:21888176-21888195 | MS.gene39421:CDS | 35.0% | |
| TTAAGCAACGTTGAAAAAGC+AGG | + | chr4.2:21888289-21888308 | MS.gene39421:CDS | 35.0% | |
| !!! | ACTAGGACTTTTTTCTAAGG+CGG | + | chr4.2:21888363-21888382 | MS.gene39421:CDS | 35.0% |
| AAGTGACAGAGAAGCCAAAA+CGG | - | chr4.2:21888440-21888459 | None:intergenic | 40.0% | |
| CTCTCTTCAATCGAGAAACT+AGG | + | chr4.2:21888346-21888365 | MS.gene39421:CDS | 40.0% | |
| CTTATTAGAGAAACTCGCTG+CGG | + | chr4.2:21888405-21888424 | MS.gene39421:CDS | 40.0% | |
| TAGTGTGGATGTGTTGAAGA+TGG | - | chr4.2:21887984-21888003 | None:intergenic | 40.0% | |
| !!! | TTTTCTAAGGCGGAAGAACT+TGG | + | chr4.2:21888373-21888392 | MS.gene39421:CDS | 40.0% |
| ACAAGAGCGGTAGTATCATC+AGG | - | chr4.2:21888502-21888521 | None:intergenic | 45.0% | |
| AGCCTGTACTACAACAAGAG+CGG | - | chr4.2:21888515-21888534 | None:intergenic | 45.0% | |
| AGGAAGCGAAGAAGTAGAAG+TGG | + | chr4.2:21888234-21888253 | MS.gene39421:CDS | 45.0% | |
| GACGGTGAAAGGTTTATTGG+AGG | - | chr4.2:21888046-21888065 | None:intergenic | 45.0% | |
| GGAGCAGGAATATTCTACGA+AGG | + | chr4.2:21888214-21888233 | MS.gene39421:CDS | 45.0% | |
| TAGGGAATGAGCGATAGTGA+CGG | - | chr4.2:21888020-21888039 | None:intergenic | 45.0% | |
| TGAAGATGGAGAGCTGAAGT+TGG | - | chr4.2:21887970-21887989 | None:intergenic | 45.0% | |
| TTCGCTGGATCTGTTGTTCT+CGG | + | chr4.2:21888574-21888593 | MS.gene39421:CDS | 45.0% | |
| ! | AAGAAACAATGGTTCGGAGC+AGG | + | chr4.2:21888199-21888218 | MS.gene39421:CDS | 45.0% |
| ! | TACCGCTCTTGTTGTAGTAC+AGG | + | chr4.2:21888510-21888529 | MS.gene39421:CDS | 45.0% |
| !! | TACCTTCTTTTTGGGAGCCA+TGG | - | chr4.2:21888073-21888092 | None:intergenic | 45.0% |
| ACCTTTCACCGTCTTTGCCA+TGG | + | chr4.2:21888053-21888072 | MS.gene39421:CDS | 50.0% | |
| GACAGAGAAGCCAAAACGGA+AGG | - | chr4.2:21888436-21888455 | None:intergenic | 50.0% | |
| GACGCCGAATTCTTCAGCTT+TGG | - | chr4.2:21888323-21888342 | None:intergenic | 50.0% | |
| TGCCATGGCTCCCAAAAAGA+AGG | + | chr4.2:21888068-21888087 | MS.gene39421:CDS | 50.0% | |
| TTTGGGAGCCATGGCAAAGA+CGG | - | chr4.2:21888064-21888083 | None:intergenic | 50.0% | |
| ! | GAATGAGCGATAGTGACGGA+GGG | - | chr4.2:21888016-21888035 | None:intergenic | 50.0% |
| !! | TCTGTCACTTCCGACGCTTT+TGG | + | chr4.2:21888450-21888469 | MS.gene39421:CDS | 50.0% |
| !! | TTGCTGCTGCTCTTGGTGTT+GGG | + | chr4.2:21888539-21888558 | MS.gene39421:CDS | 50.0% |
| CTGGATCTGTTGTTCTCGGC+GGG | + | chr4.2:21888578-21888597 | MS.gene39421:CDS | 55.0% | |
| GCCATGGCAAAGACGGTGAA+AGG | - | chr4.2:21888057-21888076 | None:intergenic | 55.0% | |
| GCTGGATCTGTTGTTCTCGG+CGG | + | chr4.2:21888577-21888596 | MS.gene39421:CDS | 55.0% | |
| GCTGTTGTTGCTGCTGCTCT+TGG | + | chr4.2:21888532-21888551 | MS.gene39421:CDS | 55.0% | |
| GGAATGAGCGATAGTGACGG+AGG | - | chr4.2:21888017-21888036 | None:intergenic | 55.0% | |
| TGGAGAGCTGAAGTTGGAGC+AGG | - | chr4.2:21887964-21887983 | None:intergenic | 55.0% | |
| ! | GCAACAGCAGCCAAAAGCGT+CGG | - | chr4.2:21888463-21888482 | None:intergenic | 55.0% |
| ! | GTTGCTGCTGCTCTTGGTGT+TGG | + | chr4.2:21888538-21888557 | MS.gene39421:CDS | 55.0% |
| ! | TGCGGTCTCTCCTTCCGTTT+TGG | + | chr4.2:21888423-21888442 | MS.gene39421:CDS | 55.0% |
| !! | CTCTTGGTGTTGGGGCTGTT+GGG | + | chr4.2:21888548-21888567 | MS.gene39421:CDS | 55.0% |
| !! | GCTTTTGGCTGCTGTTGCGA+CGG | + | chr4.2:21888465-21888484 | MS.gene39421:CDS | 55.0% |
| !! | TGCTGCTGCTCTTGGTGTTG+GGG | + | chr4.2:21888540-21888559 | MS.gene39421:CDS | 55.0% |
| TTTGGCTGCTGTTGCGACGG+TGG | + | chr4.2:21888468-21888487 | MS.gene39421:CDS | 60.0% | |
| ! | AGCGATAGTGACGGAGGGTG+CGG | - | chr4.2:21888011-21888030 | None:intergenic | 60.0% |
| !! | GCTCTTGGTGTTGGGGCTGT+TGG | + | chr4.2:21888547-21888566 | MS.gene39421:CDS | 60.0% |
| !! | TGTTCTCGGCGGGTTGCAAG+AGG | + | chr4.2:21888588-21888607 | MS.gene39421:CDS | 60.0% |
| ! | GATAGTGACGGAGGGTGCGG+TGG | - | chr4.2:21888008-21888027 | None:intergenic | 65.0% |
| ! | GGAGGGTGCGGTGGTTAGTG+TGG | - | chr4.2:21887999-21888018 | None:intergenic | 65.0% |
| ! | GGGGCTGTTGGGTTGTTCGC+TGG | + | chr4.2:21888559-21888578 | MS.gene39421:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 21887952 | 21888618 | 21887952 | ID=MS.gene39421 |
| chr4.2 | mRNA | 21887952 | 21888618 | 21887952 | ID=MS.gene39421.t1;Parent=MS.gene39421 |
| chr4.2 | exon | 21887952 | 21888089 | 21887952 | ID=MS.gene39421.t1.exon1;Parent=MS.gene39421.t1 |
| chr4.2 | CDS | 21887952 | 21888089 | 21887952 | ID=cds.MS.gene39421.t1;Parent=MS.gene39421.t1 |
| chr4.2 | exon | 21888175 | 21888618 | 21888175 | ID=MS.gene39421.t1.exon2;Parent=MS.gene39421.t1 |
| chr4.2 | CDS | 21888175 | 21888618 | 21888175 | ID=cds.MS.gene39421.t1;Parent=MS.gene39421.t1 |
| Gene Sequence |
| Protein sequence |
