Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34450.t1 | XP_024625378.1 | 96.1 | 383 | 14 | 1 | 1 | 383 | 1 | 382 | 2.70E-204 | 721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34450.t1 | Q99JY4 | 27.0 | 244 | 150 | 6 | 93 | 322 | 74 | 303 | 2.4e-15 | 84.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34450.t1 | G7IAR4 | 95.6 | 383 | 14 | 2 | 1 | 383 | 1 | 380 | 7.0e-202 | 712.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene34450 | 0.878529 | 2.61E-69 | -1.69E-46 |
| MS.gene049171 | MS.gene34450 | 0.879729 | 9.82E-70 | -1.69E-46 |
| MS.gene049173 | MS.gene34450 | 0.802623 | 5.14E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene34450 | 0.863095 | 3.18E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene34450 | 0.891936 | 2.52E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene34450 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene34450 | 0.867017 | 1.87E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene34450 | 0.851569 | 8.15E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene34450 | 0.809306 | 2.02E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene34450 | 0.823347 | 1.45E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene34450 | 0.90395 | 2.04E-79 | -1.69E-46 |
| MS.gene049633 | MS.gene34450 | 0.863726 | 2.03E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene34450 | 0.872729 | 2.54E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene34450 | 0.83448 | 2.93E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene34450 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene34450 | 0.809656 | 1.70E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene34450 | 0.852968 | 3.26E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene34450 | 0.858385 | 8.55E-63 | -1.69E-46 |
| MS.gene050327 | MS.gene34450 | -0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene050333 | MS.gene34450 | 0.810798 | 9.63E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene34450 | 0.831929 | 1.26E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene34450 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene34450 | 0.847993 | 8.14E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene34450 | 0.826867 | 2.14E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene34450 | 0.879586 | 1.10E-69 | -1.69E-46 |
| MS.gene050577 | MS.gene34450 | 0.83974 | 1.32E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene34450 | 0.889948 | 1.53E-73 | -1.69E-46 |
| MS.gene050612 | MS.gene34450 | 0.836613 | 8.44E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene34450 | 0.857893 | 1.20E-62 | -1.69E-46 |
| MS.gene050675 | MS.gene34450 | 0.826698 | 2.35E-54 | -1.69E-46 |
| MS.gene050690 | MS.gene34450 | 0.806407 | 8.35E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene34450 | 0.84461 | 6.80E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene34450 | 0.889397 | 2.51E-73 | -1.69E-46 |
| MS.gene050772 | MS.gene34450 | 0.896972 | 2.21E-76 | -1.69E-46 |
| MS.gene050809 | MS.gene34450 | -0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene34450 | 0.885824 | 5.83E-72 | -1.69E-46 |
| MS.gene05081 | MS.gene34450 | 0.902954 | 5.72E-79 | -1.69E-46 |
| MS.gene050868 | MS.gene34450 | 0.865883 | 4.27E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene34450 | 0.863855 | 1.85E-64 | -1.69E-46 |
| MS.gene050904 | MS.gene34450 | 0.81657 | 5.17E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene34450 | 0.877517 | 5.90E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene34450 | 0.812264 | 4.63E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene34450 | 0.868151 | 8.08E-66 | -1.69E-46 |
| MS.gene051167 | MS.gene34450 | -0.839783 | 1.29E-57 | -1.69E-46 |
| MS.gene051228 | MS.gene34450 | 0.809349 | 1.98E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene34450 | 0.839514 | 1.51E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene34450 | 0.845825 | 3.19E-59 | -1.69E-46 |
| MS.gene051551 | MS.gene34450 | 0.807604 | 4.66E-50 | -1.69E-46 |
| MS.gene051617 | MS.gene34450 | 0.819872 | 9.25E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene34450 | 0.892231 | 1.92E-74 | -1.69E-46 |
| MS.gene051694 | MS.gene34450 | 0.840928 | 6.47E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene34450 | 0.861734 | 8.33E-64 | -1.69E-46 |
| MS.gene051810 | MS.gene34450 | 0.810802 | 9.62E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene34450 | 0.924675 | 5.13E-90 | -1.69E-46 |
| MS.gene051858 | MS.gene34450 | 0.876331 | 1.52E-68 | -1.69E-46 |
| MS.gene051874 | MS.gene34450 | 0.832763 | 7.85E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene34450 | 0.815134 | 1.08E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene34450 | 0.807699 | 4.45E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene34450 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene34450 | 0.86111 | 1.29E-63 | -1.69E-46 |
| MS.gene052346 | MS.gene34450 | 0.831299 | 1.81E-55 | -1.69E-46 |
| MS.gene052379 | MS.gene34450 | 0.834211 | 3.42E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene34450 | 0.848546 | 5.72E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene34450 | 0.844352 | 7.97E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene34450 | 0.824292 | 8.74E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene34450 | 0.831897 | 1.29E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene34450 | 0.845203 | 4.70E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene34450 | 0.837077 | 6.43E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene34450 | 0.88123 | 2.85E-70 | -1.69E-46 |
| MS.gene052503 | MS.gene34450 | 0.890878 | 6.62E-74 | -1.69E-46 |
| MS.gene052504 | MS.gene34450 | 0.838903 | 2.18E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene34450 | 0.870007 | 2.02E-66 | -1.69E-46 |
| MS.gene052506 | MS.gene34450 | 0.875868 | 2.19E-68 | -1.69E-46 |
| MS.gene052615 | MS.gene34450 | 0.862326 | 5.48E-64 | -1.69E-46 |
| MS.gene052820 | MS.gene34450 | 0.867244 | 1.58E-65 | -1.69E-46 |
| MS.gene052822 | MS.gene34450 | 0.875285 | 3.48E-68 | -1.69E-46 |
| MS.gene052823 | MS.gene34450 | 0.877247 | 7.32E-69 | -1.69E-46 |
| MS.gene052825 | MS.gene34450 | 0.885139 | 1.05E-71 | -1.69E-46 |
| MS.gene052870 | MS.gene34450 | 0.874463 | 6.62E-68 | -1.69E-46 |
| MS.gene052872 | MS.gene34450 | 0.879031 | 1.74E-69 | -1.69E-46 |
| MS.gene052966 | MS.gene34450 | 0.841639 | 4.21E-58 | -1.69E-46 |
| MS.gene052982 | MS.gene34450 | 0.83373 | 4.51E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene34450 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene34450 | 0.851514 | 8.44E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene34450 | 0.811645 | 6.31E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene34450 | 0.826967 | 2.03E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene34450 | 0.864058 | 1.60E-64 | -1.69E-46 |
| MS.gene053207 | MS.gene34450 | 0.882107 | 1.37E-70 | -1.69E-46 |
| MS.gene053213 | MS.gene34450 | 0.864859 | 8.98E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene34450 | 0.856972 | 2.24E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene34450 | 0.804018 | 2.64E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene34450 | -0.810352 | 1.20E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene34450 | 0.832389 | 9.72E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene34450 | 0.833307 | 5.75E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene34450 | 0.853862 | 1.80E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene34450 | 0.865736 | 4.76E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene34450 | 0.878141 | 3.57E-69 | -1.69E-46 |
| MS.gene053579 | MS.gene34450 | 0.825307 | 5.04E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene34450 | 0.835009 | 2.15E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene34450 | 0.877899 | 4.34E-69 | -1.69E-46 |
| MS.gene053824 | MS.gene34450 | 0.914772 | 1.29E-84 | -1.69E-46 |
| MS.gene053916 | MS.gene34450 | 0.88323 | 5.35E-71 | -1.69E-46 |
| MS.gene054003 | MS.gene34450 | 0.848191 | 7.17E-60 | -1.69E-46 |
| MS.gene054344 | MS.gene34450 | 0.826776 | 2.25E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene34450 | 0.837294 | 5.66E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene34450 | 0.855936 | 4.51E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene34450 | 0.871106 | 8.79E-67 | -1.69E-46 |
| MS.gene054642 | MS.gene34450 | 0.859041 | 5.44E-63 | -1.69E-46 |
| MS.gene054706 | MS.gene34450 | -0.856013 | 4.28E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene34450 | 0.839758 | 1.31E-57 | -1.69E-46 |
| MS.gene054884 | MS.gene34450 | -0.831536 | 1.58E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene34450 | 0.862341 | 5.43E-64 | -1.69E-46 |
| MS.gene05494 | MS.gene34450 | 0.861014 | 1.38E-63 | -1.69E-46 |
| MS.gene054954 | MS.gene34450 | 0.837858 | 4.06E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene34450 | 0.873096 | 1.91E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene34450 | 0.909409 | 5.88E-82 | -1.69E-46 |
| MS.gene055212 | MS.gene34450 | 0.803845 | 2.87E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene34450 | 0.884204 | 2.34E-71 | -1.69E-46 |
| MS.gene055289 | MS.gene34450 | 0.888243 | 7.02E-73 | -1.69E-46 |
| MS.gene055362 | MS.gene34450 | 0.85203 | 6.03E-61 | -1.69E-46 |
| MS.gene055370 | MS.gene34450 | 0.806981 | 6.32E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene34450 | 0.881976 | 1.53E-70 | -1.69E-46 |
| MS.gene055539 | MS.gene34450 | 0.812267 | 4.62E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene34450 | 0.907531 | 4.58E-81 | -1.69E-46 |
| MS.gene055620 | MS.gene34450 | 0.802504 | 5.44E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene34450 | 0.856175 | 3.84E-62 | -1.69E-46 |
| MS.gene055741 | MS.gene34450 | 0.827899 | 1.21E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene34450 | 0.823299 | 1.49E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene34450 | 0.843855 | 1.08E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene34450 | 0.83868 | 2.49E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene34450 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene34450 | 0.848164 | 7.30E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene34450 | 0.80693 | 6.47E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene34450 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene34450 | 0.85866 | 7.07E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene34450 | 0.899114 | 2.73E-77 | -1.69E-46 |
| MS.gene056046 | MS.gene34450 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene056083 | MS.gene34450 | 0.812263 | 4.63E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene34450 | 0.835601 | 1.53E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene34450 | 0.815975 | 7.02E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene34450 | 0.826504 | 2.62E-54 | -1.69E-46 |
| MS.gene056409 | MS.gene34450 | 0.811194 | 7.91E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene34450 | 0.804503 | 2.09E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene34450 | 0.836412 | 9.50E-57 | -1.69E-46 |
| MS.gene056449 | MS.gene34450 | 0.806615 | 7.55E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene34450 | 0.842283 | 2.84E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene34450 | 0.859505 | 3.95E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene34450 | 0.831232 | 1.88E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene34450 | 0.858742 | 6.69E-63 | -1.69E-46 |
| MS.gene056610 | MS.gene34450 | 0.817484 | 3.22E-52 | -1.69E-46 |
| MS.gene056618 | MS.gene34450 | -0.800573 | 1.35E-48 | -1.69E-46 |
| MS.gene05664 | MS.gene34450 | 0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene34450 | 0.852947 | 3.30E-61 | -1.69E-46 |
| MS.gene05666 | MS.gene34450 | 0.819543 | 1.10E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene34450 | 0.84979 | 2.58E-60 | -1.69E-46 |
| MS.gene056796 | MS.gene34450 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene34450 | 0.830539 | 2.77E-55 | -1.69E-46 |
| MS.gene056898 | MS.gene34450 | 0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene056947 | MS.gene34450 | 0.804496 | 2.10E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene34450 | 0.842246 | 2.91E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene34450 | 0.880906 | 3.73E-70 | -1.69E-46 |
| MS.gene057086 | MS.gene34450 | 0.827658 | 1.39E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene34450 | 0.829065 | 6.34E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene34450 | 0.810299 | 1.24E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene34450 | 0.817706 | 2.87E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene34450 | 0.814391 | 1.58E-51 | -1.69E-46 |
| MS.gene057289 | MS.gene34450 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene34450 | 0.843797 | 1.12E-58 | -1.69E-46 |
| MS.gene057332 | MS.gene34450 | 0.840852 | 6.77E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene34450 | 0.872184 | 3.86E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene34450 | 0.888104 | 7.93E-73 | -1.69E-46 |
| MS.gene057734 | MS.gene34450 | 0.851862 | 6.73E-61 | -1.69E-46 |
| MS.gene057823 | MS.gene34450 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene34450 | 0.836606 | 8.48E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene34450 | 0.876384 | 1.46E-68 | -1.69E-46 |
| MS.gene057857 | MS.gene34450 | 0.852349 | 4.90E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene34450 | 0.831536 | 1.58E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene34450 | 0.860598 | 1.85E-63 | -1.69E-46 |
| MS.gene058006 | MS.gene34450 | 0.8287 | 7.77E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene34450 | 0.835493 | 1.63E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene34450 | 0.840684 | 7.50E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene34450 | 0.820586 | 6.34E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene34450 | 0.819865 | 9.28E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene34450 | -0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene34450 | 0.876717 | 1.12E-68 | -1.69E-46 |
| MS.gene058376 | MS.gene34450 | 0.848988 | 4.31E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene34450 | 0.883291 | 5.08E-71 | -1.69E-46 |
| MS.gene058418 | MS.gene34450 | -0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene34450 | 0.884004 | 2.78E-71 | -1.69E-46 |
| MS.gene058444 | MS.gene34450 | 0.830644 | 2.61E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene34450 | 0.857435 | 1.64E-62 | -1.69E-46 |
| MS.gene058700 | MS.gene34450 | 0.823248 | 1.53E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene34450 | 0.839739 | 1.32E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene34450 | 0.850111 | 2.10E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene34450 | 0.900265 | 8.71E-78 | -1.69E-46 |
| MS.gene05883 | MS.gene34450 | 0.806051 | 9.92E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene34450 | 0.816628 | 5.01E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene34450 | 0.828259 | 9.93E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene34450 | 0.904126 | 1.70E-79 | -1.69E-46 |
| MS.gene059029 | MS.gene34450 | 0.815364 | 9.60E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene34450 | 0.854902 | 9.03E-62 | -1.69E-46 |
| MS.gene05914 | MS.gene34450 | 0.840295 | 9.48E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene34450 | 0.905328 | 4.82E-80 | -1.69E-46 |
| MS.gene059367 | MS.gene34450 | 0.816595 | 5.10E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene34450 | 0.82723 | 1.75E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene34450 | 0.81484 | 1.26E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene34450 | 0.860965 | 1.43E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene34450 | 0.859809 | 3.20E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene34450 | 0.812402 | 4.32E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene34450 | 0.88066 | 4.57E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene34450 | 0.834344 | 3.16E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene34450 | 0.845258 | 4.54E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene34450 | 0.831809 | 1.35E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene34450 | 0.869175 | 3.77E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene34450 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene34450 | 0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene34450 | 0.827483 | 1.53E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene34450 | 0.831322 | 1.78E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene34450 | 0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene34450 | 0.813197 | 2.89E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene34450 | 0.869807 | 2.35E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene34450 | 0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene34450 | 0.848139 | 7.41E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene34450 | 0.857964 | 1.14E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene34450 | 0.81361 | 2.35E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene34450 | 0.892728 | 1.21E-74 | -1.69E-46 |
| MS.gene060837 | MS.gene34450 | 0.851183 | 1.05E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene34450 | 0.910966 | 1.04E-82 | -1.69E-46 |
| MS.gene06097 | MS.gene34450 | 0.813563 | 2.40E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene34450 | 0.857131 | 2.01E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene34450 | 0.838478 | 2.81E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene34450 | 0.854699 | 1.03E-61 | -1.69E-46 |
| MS.gene061154 | MS.gene34450 | 0.820697 | 5.98E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene34450 | 0.810816 | 9.55E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34450.t1 | MTR_1g101540 | 95.561 | 383 | 14 | 2 | 1 | 383 | 1 | 380 | 0.0 | 735 |
| MS.gene34450.t1 | MTR_4g088945 | 88.764 | 89 | 6 | 2 | 223 | 309 | 236 | 322 | 6.52e-43 | 153 |
| MS.gene34450.t1 | MTR_4g046707 | 29.870 | 231 | 140 | 6 | 93 | 322 | 98 | 307 | 1.48e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34450.t1 | AT5G52030 | 65.104 | 384 | 112 | 7 | 10 | 374 | 12 | 392 | 7.09e-167 | 473 |
| MS.gene34450.t1 | AT5G52030 | 70.000 | 240 | 67 | 2 | 140 | 374 | 9 | 248 | 8.26e-110 | 322 |
| MS.gene34450.t1 | AT1G05270 | 31.169 | 231 | 137 | 6 | 93 | 322 | 111 | 320 | 5.72e-26 | 107 |
| MS.gene34450.t1 | AT2G32340 | 30.638 | 235 | 134 | 7 | 93 | 322 | 97 | 307 | 8.91e-23 | 98.6 |
Find 83 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATCTCTCAGACCCTTAA+AGG | 0.146320 | 1.2:-75827945 | MS.gene34450:CDS |
| AAATGGATTGGTTGTGAAAA+TGG | 0.206345 | 1.2:+75827979 | None:intergenic |
| AGGTTTGACTGAAACCTTTA+AGG | 0.214521 | 1.2:+75827931 | None:intergenic |
| CGGTGATTGGCATTGTCTTA+TGG | 0.221376 | 1.2:-75825333 | MS.gene34450:CDS |
| AGGCTGTGAATAACTGTAAA+AGG | 0.224403 | 1.2:-75825516 | MS.gene34450:CDS |
| ACCATTTATGAATTCATATA+AGG | 0.233556 | 1.2:+75825309 | None:intergenic |
| TCAAATATTGACCGCCCTTT+TGG | 0.242909 | 1.2:-75826903 | MS.gene34450:CDS |
| GGTTTGGTCCTGTTCCTTCT+TGG | 0.243513 | 1.2:-75827784 | MS.gene34450:CDS |
| AGTTGGCGCACAACTAGTTT+TGG | 0.268585 | 1.2:-75826759 | MS.gene34450:CDS |
| GGTGATTGGCATTGTCTTAT+GGG | 0.292214 | 1.2:-75825332 | MS.gene34450:CDS |
| TTGTTGAACCTGAGTATATT+TGG | 0.298094 | 1.2:-75827751 | MS.gene34450:CDS |
| GCCTTATATGAATTCATAAA+TGG | 0.312892 | 1.2:-75825310 | MS.gene34450:CDS |
| CCTGAGTATATTTGGTTGAT+TGG | 0.323014 | 1.2:-75827743 | MS.gene34450:CDS |
| TTACCCTGAGTTGCTTGATT+TGG | 0.331889 | 1.2:-75827843 | MS.gene34450:CDS |
| CATGTATAAGAGGCGGCAAT+AGG | 0.338425 | 1.2:+75825693 | None:intergenic |
| TGACAATGGTAGCTTGGTTT+TGG | 0.339365 | 1.2:-75827819 | MS.gene34450:CDS |
| AGCTCAACAACCACATTATC+TGG | 0.358672 | 1.2:+75827659 | None:intergenic |
| TCAAATGATGGGGCTTCTAA+TGG | 0.385391 | 1.2:-75825394 | MS.gene34450:CDS |
| ATCAGCTTGACAAACAATTA+AGG | 0.385684 | 1.2:-75827246 | MS.gene34450:CDS |
| GAGCATGGAAGGCTTTGAAT+TGG | 0.390401 | 1.2:-75826522 | MS.gene34450:CDS |
| TTGAGATTTCGAGACCTTGC+TGG | 0.392448 | 1.2:-75825424 | MS.gene34450:CDS |
| GGTTTGACTGAAACCTTTAA+GGG | 0.395303 | 1.2:+75827932 | None:intergenic |
| GTACATACTGTGATTTCAAT+TGG | 0.412770 | 1.2:+75826728 | None:intergenic |
| GCAGATTTCATTTCCAGAGC+TGG | 0.416909 | 1.2:-75827289 | MS.gene34450:intron |
| TATGCACTGTTAGCTGATAC+AGG | 0.417737 | 1.2:-75825451 | MS.gene34450:CDS |
| AATGGATTGGTTGTGAAAAT+GGG | 0.423259 | 1.2:+75827980 | None:intergenic |
| TTGGTCCTGTTCCTTCTTGG+AGG | 0.424339 | 1.2:-75827781 | MS.gene34450:CDS |
| TTTGGCATTGAGATTACTCC+TGG | 0.424534 | 1.2:-75826949 | MS.gene34450:CDS |
| AAAAGGGTGGTAGGTGTGAT+TGG | 0.444853 | 1.2:-75825499 | MS.gene34450:CDS |
| CAGATTTCATTTCCAGAGCT+GGG | 0.445745 | 1.2:-75827288 | MS.gene34450:CDS |
| TTAGTGAGGGACACGGTGAT+TGG | 0.458487 | 1.2:-75825346 | MS.gene34450:CDS |
| ATCAGGTGGTCAAACTGCTT+TGG | 0.458604 | 1.2:-75826967 | MS.gene34450:intron |
| TTGGTTCAGAAGAAGAGGTT+TGG | 0.465843 | 1.2:-75827800 | MS.gene34450:CDS |
| TGAATTACCTCATCTCCAAA+AGG | 0.477616 | 1.2:+75826888 | None:intergenic |
| AGCATACATGATCCCAGCTC+TGG | 0.484447 | 1.2:+75827276 | None:intergenic |
| TAGTTGAAGTCAGGTGGTGG+AGG | 0.491014 | 1.2:+75827911 | None:intergenic |
| TCATTCCTCCAAGAAGGAAC+AGG | 0.492896 | 1.2:+75827776 | None:intergenic |
| TCTAGCTTGTAGTTGAAGTC+AGG | 0.495859 | 1.2:+75827902 | None:intergenic |
| GTGGTAGGTGTGATTGGAAA+AGG | 0.496641 | 1.2:-75825493 | MS.gene34450:CDS |
| CGAAAAGTGTCAGAGGAAGT+TGG | 0.501232 | 1.2:-75826776 | MS.gene34450:CDS |
| TTGTTCTGCAGTATCTTGCA+TGG | 0.505968 | 1.2:-75825555 | MS.gene34450:intron |
| ATGATGGGGCTTCTAATGGC+TGG | 0.510475 | 1.2:-75825390 | MS.gene34450:CDS |
| ACAAATTCATTCCTCCAAGA+AGG | 0.510523 | 1.2:+75827770 | None:intergenic |
| GTATCTCGTTCATGTATAAG+AGG | 0.521701 | 1.2:+75825683 | None:intergenic |
| TTTGGCTGACAATGGTAGCT+TGG | 0.521900 | 1.2:-75827825 | MS.gene34450:CDS |
| ATGTATAAGAGGCGGCAATA+GGG | 0.521908 | 1.2:+75825694 | None:intergenic |
| TCAGCCAAATCAAGCAACTC+AGG | 0.528460 | 1.2:+75827839 | None:intergenic |
| TGAGATTTCGAGACCTTGCT+GGG | 0.531713 | 1.2:-75825423 | MS.gene34450:CDS |
| GAATTACCTCATCTCCAAAA+GGG | 0.540567 | 1.2:+75826889 | None:intergenic |
| GTAGCTTCAGAGAGCATGGA+AGG | 0.554057 | 1.2:-75826533 | MS.gene34450:intron |
| GGCTGTGAATAACTGTAAAA+GGG | 0.564509 | 1.2:-75825515 | MS.gene34450:CDS |
| ATTGGAAAAGGCCACATGAA+TGG | 0.567386 | 1.2:-75825481 | MS.gene34450:CDS |
| CAGAAAGCAAGTTCAGATGA+TGG | 0.573617 | 1.2:-75825758 | MS.gene34450:CDS |
| CATTTCTACAAATAAGCTTG+AGG | 0.575953 | 1.2:-75826443 | MS.gene34450:intron |
| TTCTAAAGAGTCAGCTATGG+AGG | 0.576746 | 1.2:-75827708 | MS.gene34450:CDS |
| ATGGTCTCTGAAGCGGAGCA+AGG | 0.578967 | 1.2:-75825536 | MS.gene34450:CDS |
| AGCTTGTAGTTGAAGTCAGG+TGG | 0.580467 | 1.2:+75827905 | None:intergenic |
| TGTTTCTAAAGAGTCAGCTA+TGG | 0.581325 | 1.2:-75827711 | MS.gene34450:CDS |
| TTATATGAATTCATAAATGG+TGG | 0.584002 | 1.2:-75825307 | MS.gene34450:CDS |
| ATCTTGCATGGTCTCTGAAG+CGG | 0.593986 | 1.2:-75825543 | MS.gene34450:CDS |
| CCCTCACTAAACTCTTGACT+AGG | 0.596428 | 1.2:+75825359 | None:intergenic |
| GCTTACCGAGGTTTATGCTA+CGG | 0.602521 | 1.2:+75827176 | None:intergenic |
| CCAATCAACCAAATATACTC+AGG | 0.602610 | 1.2:+75827743 | None:intergenic |
| ATAAGAGGCGGCAATAGGGA+TGG | 0.604140 | 1.2:+75825698 | None:intergenic |
| CGCTGCTCGAAAAGTGTCAG+AGG | 0.606032 | 1.2:-75826783 | MS.gene34450:CDS |
| TTGTAGTTGAAGTCAGGTGG+TGG | 0.615582 | 1.2:+75827908 | None:intergenic |
| AATAACTGTAAAAGGGTGGT+AGG | 0.617141 | 1.2:-75825508 | MS.gene34450:CDS |
| ATTGGTTGTGAAAATGGGGA+AGG | 0.628812 | 1.2:+75827985 | None:intergenic |
| AGCTGTGAAGCCAGATAATG+TGG | 0.641571 | 1.2:-75827669 | MS.gene34450:CDS |
| TTGCTTGATTTGGCTGACAA+TGG | 0.644980 | 1.2:-75827833 | MS.gene34450:CDS |
| CTGATGAAGATGTTATTCCA+CGG | 0.647888 | 1.2:+75826467 | None:intergenic |
| TTATTGACGATAGTTATCCG+TGG | 0.648146 | 1.2:-75826484 | MS.gene34450:CDS |
| ATGGATTGGTTGTGAAAATG+GGG | 0.648347 | 1.2:+75827981 | None:intergenic |
| ACCTAGTCAAGAGTTTAGTG+AGG | 0.655508 | 1.2:-75825360 | MS.gene34450:CDS |
| CAAGAGTTTAGTGAGGGACA+CGG | 0.657364 | 1.2:-75825353 | MS.gene34450:CDS |
| CCTAGTCAAGAGTTTAGTGA+GGG | 0.661710 | 1.2:-75825359 | MS.gene34450:CDS |
| ATGCACTGTTAGCTGATACA+GGG | 0.664898 | 1.2:-75825450 | MS.gene34450:CDS |
| CAGCCAAATCAAGCAACTCA+GGG | 0.672096 | 1.2:+75827840 | None:intergenic |
| CATATATTACACCATTCATG+TGG | 0.675235 | 1.2:+75825470 | None:intergenic |
| TGTGAATAACTGTAAAAGGG+TGG | 0.676596 | 1.2:-75825512 | MS.gene34450:CDS |
| TCTCGTTCATGTATAAGAGG+CGG | 0.680308 | 1.2:+75825686 | None:intergenic |
| TTACCTCATCTCCAAAAGGG+CGG | 0.697162 | 1.2:+75826892 | None:intergenic |
| ATTGGCCGTAGCATAAACCT+CGG | 0.708741 | 1.2:-75827181 | MS.gene34450:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATACTATTGTTTACT+TGG | + | chr1.2:75827724-75827743 | None:intergenic | 15.0% |
| !! | AAAAATACTATTGTTTACTT+GGG | + | chr1.2:75827723-75827742 | None:intergenic | 15.0% |
| !! | ATTTAATCTAAATCAAGATA+AGG | - | chr1.2:75826218-75826237 | MS.gene34450:intron | 15.0% |
| !! | TATTGTATTATTGCATATTT+CGG | - | chr1.2:75825894-75825913 | MS.gene34450:intron | 15.0% |
| !! | TTATCTTGATTTAGATTAAA+TGG | + | chr1.2:75826219-75826238 | None:intergenic | 15.0% |
| !! | TTTAATCTAAATCAAGATAA+GGG | - | chr1.2:75826219-75826238 | MS.gene34450:intron | 15.0% |
| !!! | ACAAAATATCATTTTAAAAG+GGG | + | chr1.2:75826961-75826980 | None:intergenic | 15.0% |
| !!! | GACAAAATATCATTTTAAAA+GGG | + | chr1.2:75826962-75826981 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAACAAAG+TGG | - | chr1.2:75827076-75827095 | MS.gene34450:intron | 15.0% |
| !! | ACCATTTATGAATTCATATA+AGG | + | chr1.2:75827995-75828014 | None:intergenic | 20.0% |
| !! | ATAAAATTAGGAGCTATATA+TGG | + | chr1.2:75825853-75825872 | None:intergenic | 20.0% |
| !! | ATTTGTCAATATGCATTATA+CGG | - | chr1.2:75825925-75825944 | MS.gene34450:intron | 20.0% |
| !! | TTATATGAATTCATAAATGG+TGG | - | chr1.2:75827994-75828013 | MS.gene34450:CDS | 20.0% |
| !!! | GGACAAAATATCATTTTAAA+AGG | + | chr1.2:75826963-75826982 | None:intergenic | 20.0% |
| ! | AAAACTTATTTCAATACCCT+TGG | + | chr1.2:75827307-75827326 | None:intergenic | 25.0% |
| ! | AACATTTCACTATAACTGAA+TGG | + | chr1.2:75827343-75827362 | None:intergenic | 25.0% |
| ! | AAGAAAATCTCAACATTAAC+TGG | + | chr1.2:75825733-75825752 | None:intergenic | 25.0% |
| ! | ATATATAAAACTCTCAACCA+GGG | - | chr1.2:75827421-75827440 | MS.gene34450:intron | 25.0% |
| ! | GCCTTATATGAATTCATAAA+TGG | - | chr1.2:75827991-75828010 | MS.gene34450:CDS | 25.0% |
| ! | TATATATAAAACTCTCAACC+AGG | - | chr1.2:75827420-75827439 | MS.gene34450:intron | 25.0% |
| ! | TATTCCATAGTGTTCTTTAA+AGG | - | chr1.2:75826597-75826616 | MS.gene34450:intron | 25.0% |
| ! | TGTGTAAGATGCATAATTAA+AGG | - | chr1.2:75827373-75827392 | MS.gene34450:intron | 25.0% |
| ! | TTCAGTCGGAAAATAAAATT+AGG | + | chr1.2:75825865-75825884 | None:intergenic | 25.0% |
| ! | TTCCGAGTACTTTATTAATT+GGG | - | chr1.2:75827261-75827280 | MS.gene34450:CDS | 25.0% |
| ! | TTTAACCTAAACACAAAACA+CGG | + | chr1.2:75827039-75827058 | None:intergenic | 25.0% |
| ! | TTTCCGAGTACTTTATTAAT+TGG | - | chr1.2:75827260-75827279 | MS.gene34450:CDS | 25.0% |
| !! | AATTAATAAAGTACTCGGAA+AGG | + | chr1.2:75827261-75827280 | None:intergenic | 25.0% |
| !! | ATGTTGAGATTTTCTTATTC+AGG | - | chr1.2:75825737-75825756 | MS.gene34450:CDS | 25.0% |
| !! | ATTAATAAAGTACTCGGAAA+GGG | + | chr1.2:75827260-75827279 | None:intergenic | 25.0% |
| !! | ATTTCCTTTAAAGAACACTA+TGG | + | chr1.2:75826604-75826623 | None:intergenic | 25.0% |
| !! | TGTTTTATGATCGAAATATC+AGG | - | chr1.2:75826317-75826336 | MS.gene34450:intron | 25.0% |
| !!! | ACATATCTATCTTTTTTCTC+AGG | - | chr1.2:75826161-75826180 | MS.gene34450:intron | 25.0% |
| !!! | ATATCTATCTTTTTTCTCAG+GGG | - | chr1.2:75826163-75826182 | MS.gene34450:intron | 25.0% |
| !!! | CATATCTATCTTTTTTCTCA+GGG | - | chr1.2:75826162-75826181 | MS.gene34450:intron | 25.0% |
| !!! | TAATGTGTCTTTAAGATACT+AGG | + | chr1.2:75826192-75826211 | None:intergenic | 25.0% |
| !!! | TTTATTTTGTACCCATGAAT+TGG | - | chr1.2:75826251-75826270 | MS.gene34450:intron | 25.0% |
| ACATCTCAAAACCAATTCAT+GGG | + | chr1.2:75826265-75826284 | None:intergenic | 30.0% | |
| ATCAGCTTGACAAACAATTA+AGG | - | chr1.2:75826055-75826074 | MS.gene34450:intron | 30.0% | |
| CATATATTACACCATTCATG+TGG | + | chr1.2:75827834-75827853 | None:intergenic | 30.0% | |
| CATTTCTACAAATAAGCTTG+AGG | - | chr1.2:75826858-75826877 | MS.gene34450:intron | 30.0% | |
| CTGGGAAAAATTCAAATGAT+GGG | - | chr1.2:75827896-75827915 | MS.gene34450:CDS | 30.0% | |
| GTAATTGAGATTGACATTCT+AGG | + | chr1.2:75826896-75826915 | None:intergenic | 30.0% | |
| GTACATACTGTGATTTCAAT+TGG | + | chr1.2:75826576-75826595 | None:intergenic | 30.0% | |
| TCTGTATGATCTTAGGATAA+TGG | - | chr1.2:75826726-75826745 | MS.gene34450:intron | 30.0% | |
| TGGGAAAAATTCAAATGATG+GGG | - | chr1.2:75827897-75827916 | MS.gene34450:CDS | 30.0% | |
| TTGTTGAACCTGAGTATATT+TGG | - | chr1.2:75825550-75825569 | MS.gene34450:intron | 30.0% | |
| TTTATGATCGAAATATCAGG+TGG | - | chr1.2:75826320-75826339 | MS.gene34450:intron | 30.0% | |
| ! | AATGATATTTTGTCCTGTTC+CGG | - | chr1.2:75826968-75826987 | MS.gene34450:intron | 30.0% |
| ! | ATGTACGGAATTTGAAACAA+TGG | - | chr1.2:75826654-75826673 | MS.gene34450:intron | 30.0% |
| ! | ATTTTCCGACTGAAATCATA+GGG | - | chr1.2:75825871-75825890 | MS.gene34450:intron | 30.0% |
| ! | CTGCTTCAGATTTTTATGTA+CGG | - | chr1.2:75826639-75826658 | MS.gene34450:intron | 30.0% |
| ! | GAAGTATTCTGTATGATCTT+AGG | - | chr1.2:75826719-75826738 | MS.gene34450:intron | 30.0% |
| ! | TATTTTCCGACTGAAATCAT+AGG | - | chr1.2:75825870-75825889 | MS.gene34450:intron | 30.0% |
| ! | TGTACGGAATTTGAAACAAT+GGG | - | chr1.2:75826655-75826674 | MS.gene34450:intron | 30.0% |
| ! | TTCTCTGTATTTGTAGCTTT+TGG | - | chr1.2:75826441-75826460 | MS.gene34450:intron | 30.0% |
| ! | TTGTGTTTAGGTTAAATGAG+TGG | - | chr1.2:75827043-75827062 | MS.gene34450:intron | 30.0% |
| !! | AAATGGATTGGTTGTGAAAA+TGG | + | chr1.2:75825325-75825344 | None:intergenic | 30.0% |
| !! | AATGGATTGGTTGTGAAAAT+GGG | + | chr1.2:75825324-75825343 | None:intergenic | 30.0% |
| !! | GATGTTTTTGAGAGGAAAAA+TGG | + | chr1.2:75825342-75825361 | None:intergenic | 30.0% |
| !! | TTTTGAGAGGAAAAATGGAT+TGG | + | chr1.2:75825337-75825356 | None:intergenic | 30.0% |
| !!! | TTTTTTGAACAAAGTGGCTT+AGG | - | chr1.2:75827082-75827101 | MS.gene34450:intron | 30.0% |
| AAAACTGAAGAGCCAAATCT+TGG | - | chr1.2:75827511-75827530 | MS.gene34450:intron | 35.0% | |
| AATAACTGTAAAAGGGTGGT+AGG | - | chr1.2:75827793-75827812 | MS.gene34450:CDS | 35.0% | |
| ACAAATTCATTCCTCCAAGA+AGG | + | chr1.2:75825534-75825553 | None:intergenic | 35.0% | |
| ACTGAGTCTTCAACAATTGA+AGG | + | chr1.2:75825953-75825972 | None:intergenic | 35.0% | |
| AGCGGAAATCTTAGCTAAAT+GGG | + | chr1.2:75827149-75827168 | None:intergenic | 35.0% | |
| AGGAGCTATATATGGACAAA+GGG | + | chr1.2:75825845-75825864 | None:intergenic | 35.0% | |
| AGGCTGTGAATAACTGTAAA+AGG | - | chr1.2:75827785-75827804 | MS.gene34450:CDS | 35.0% | |
| AGGTTTGACTGAAACCTTTA+AGG | + | chr1.2:75825373-75825392 | None:intergenic | 35.0% | |
| ATCTTAGCTAAATGGGGAAA+AGG | + | chr1.2:75827142-75827161 | None:intergenic | 35.0% | |
| CAATACCCTATGATTTCAGT+CGG | + | chr1.2:75825879-75825898 | None:intergenic | 35.0% | |
| CCAATCAACCAAATATACTC+AGG | + | chr1.2:75825561-75825580 | None:intergenic | 35.0% | |
| CCTGAGTATATTTGGTTGAT+TGG | - | chr1.2:75825558-75825577 | MS.gene34450:intron | 35.0% | |
| CTGATGAAGATGTTATTCCA+CGG | + | chr1.2:75826837-75826856 | None:intergenic | 35.0% | |
| CTGCAACTAATACCAAGATT+TGG | + | chr1.2:75827526-75827545 | None:intergenic | 35.0% | |
| GAATTACCTCATCTCCAAAA+GGG | + | chr1.2:75826415-75826434 | None:intergenic | 35.0% | |
| GACATCTCAAAACCAATTCA+TGG | + | chr1.2:75826266-75826285 | None:intergenic | 35.0% | |
| GCTGGGAAAAATTCAAATGA+TGG | - | chr1.2:75827895-75827914 | MS.gene34450:CDS | 35.0% | |
| GGCTGTGAATAACTGTAAAA+GGG | - | chr1.2:75827786-75827805 | MS.gene34450:CDS | 35.0% | |
| GGGAAAAGGAATAGCATAAA+AGG | + | chr1.2:75827128-75827147 | None:intergenic | 35.0% | |
| GGTTTGACTGAAACCTTTAA+GGG | + | chr1.2:75825372-75825391 | None:intergenic | 35.0% | |
| GTATCTCGTTCATGTATAAG+AGG | + | chr1.2:75827621-75827640 | None:intergenic | 35.0% | |
| TAGATATTTATGCATCTCCC+TGG | + | chr1.2:75827441-75827460 | None:intergenic | 35.0% | |
| TAGGAGCTATATATGGACAA+AGG | + | chr1.2:75825846-75825865 | None:intergenic | 35.0% | |
| TGAATTACCTCATCTCCAAA+AGG | + | chr1.2:75826416-75826435 | None:intergenic | 35.0% | |
| TGTGAATAACTGTAAAAGGG+TGG | - | chr1.2:75827789-75827808 | MS.gene34450:CDS | 35.0% | |
| TTAGGTTAAATGAGTGGCTT+AGG | - | chr1.2:75827049-75827068 | MS.gene34450:intron | 35.0% | |
| TTATTGACGATAGTTATCCG+TGG | - | chr1.2:75826817-75826836 | MS.gene34450:intron | 35.0% | |
| TTTCACTATAACTGAATGGC+TGG | + | chr1.2:75827339-75827358 | None:intergenic | 35.0% | |
| ! | ATGATATTTTGTCCTGTTCC+GGG | - | chr1.2:75826969-75826988 | MS.gene34450:intron | 35.0% |
| ! | CATTTGAATTTTTCCCAGCA+AGG | + | chr1.2:75827894-75827913 | None:intergenic | 35.0% |
| ! | GATTTTCTTATTCAGGCTAG+TGG | - | chr1.2:75825744-75825763 | MS.gene34450:CDS | 35.0% |
| ! | GGCCCAATTAATAAAGTACT+CGG | + | chr1.2:75827266-75827285 | None:intergenic | 35.0% |
| ! | TCTACTATGTTTTCCTTGAG+CGG | - | chr1.2:75826078-75826097 | MS.gene34450:intron | 35.0% |
| ! | TGTTTCTAAAGAGTCAGCTA+TGG | - | chr1.2:75825590-75825609 | MS.gene34450:intron | 35.0% |
| !! | ATGGATTGGTTGTGAAAATG+GGG | + | chr1.2:75825323-75825342 | None:intergenic | 35.0% |
| !! | GAAGGTTGATTTTATGATGG+TGG | + | chr1.2:75825301-75825320 | None:intergenic | 35.0% |
| !!! | ACTGGTTTTTTTGGAGCTAT+TGG | - | chr1.2:75826102-75826121 | MS.gene34450:intron | 35.0% |
| AACATCTCTCAGACCCTTAA+AGG | - | chr1.2:75825356-75825375 | MS.gene34450:CDS | 40.0% | |
| AACGAAAACCGTAGCTTAGT+AGG | + | chr1.2:75827182-75827201 | None:intergenic | 40.0% | |
| ACCTAGTCAAGAGTTTAGTG+AGG | - | chr1.2:75827941-75827960 | MS.gene34450:CDS | 40.0% | |
| ACGAAAACCGTAGCTTAGTA+GGG | + | chr1.2:75827181-75827200 | None:intergenic | 40.0% | |
| AGCTCAACAACCACATTATC+TGG | + | chr1.2:75825645-75825664 | None:intergenic | 40.0% | |
| ATGCACTGTTAGCTGATACA+GGG | - | chr1.2:75827851-75827870 | MS.gene34450:CDS | 40.0% | |
| ATGTATAAGAGGCGGCAATA+GGG | + | chr1.2:75827610-75827629 | None:intergenic | 40.0% | |
| ATTAAACAGTTCGCAGACCA+AGG | - | chr1.2:75827287-75827306 | MS.gene34450:CDS | 40.0% | |
| ATTGGAAAAGGCCACATGAA+TGG | - | chr1.2:75827820-75827839 | MS.gene34450:CDS | 40.0% | |
| ATTGGTTGTGAAAATGGGGA+AGG | + | chr1.2:75825319-75825338 | None:intergenic | 40.0% | |
| CAGAAAGCAAGTTCAGATGA+TGG | - | chr1.2:75827543-75827562 | MS.gene34450:intron | 40.0% | |
| CAGATTTCATTTCCAGAGCT+GGG | - | chr1.2:75826013-75826032 | MS.gene34450:intron | 40.0% | |
| CCTAGTCAAGAGTTTAGTGA+GGG | - | chr1.2:75827942-75827961 | MS.gene34450:CDS | 40.0% | |
| GAACAAAAATGTGCTTACCG+AGG | + | chr1.2:75826140-75826159 | None:intergenic | 40.0% | |
| GAGCGGAAATCTTAGCTAAA+TGG | + | chr1.2:75827150-75827169 | None:intergenic | 40.0% | |
| GCGGAAATCTTAGCTAAATG+GGG | + | chr1.2:75827148-75827167 | None:intergenic | 40.0% | |
| GGGATCAAGCATATAAAAGC+AGG | + | chr1.2:75826941-75826960 | None:intergenic | 40.0% | |
| GGTGATTGGCATTGTCTTAT+GGG | - | chr1.2:75827969-75827988 | MS.gene34450:CDS | 40.0% | |
| TATGCACTGTTAGCTGATAC+AGG | - | chr1.2:75827850-75827869 | MS.gene34450:CDS | 40.0% | |
| TCTCGTTCATGTATAAGAGG+CGG | + | chr1.2:75827618-75827637 | None:intergenic | 40.0% | |
| TCTTTGATGAAAAAGCAGCC+AGG | + | chr1.2:75826373-75826392 | None:intergenic | 40.0% | |
| TGGTCTGCGAACTGTTTAAT+CGG | + | chr1.2:75827287-75827306 | None:intergenic | 40.0% | |
| TTAAACAGTTCGCAGACCAA+GGG | - | chr1.2:75827288-75827307 | MS.gene34450:CDS | 40.0% | |
| TTACCCTGAGTTGCTTGATT+TGG | - | chr1.2:75825458-75825477 | MS.gene34450:CDS | 40.0% | |
| TTGGTTCAGAAGAAGAGGTT+TGG | - | chr1.2:75825501-75825520 | MS.gene34450:CDS | 40.0% | |
| TTGTTCTGCAGTATCTTGCA+TGG | - | chr1.2:75827746-75827765 | MS.gene34450:CDS | 40.0% | |
| TTGTTGAGCTATGTAGAAGC+AGG | - | chr1.2:75825655-75825674 | MS.gene34450:intron | 40.0% | |
| ! | AAGGTCCGTGTTTTGTGTTT+AGG | - | chr1.2:75827031-75827050 | MS.gene34450:intron | 40.0% |
| ! | ACTAAGCTACGGTTTTCGTT+GGG | - | chr1.2:75827182-75827201 | MS.gene34450:CDS | 40.0% |
| ! | CTACTATGTTTTCCTTGAGC+GGG | - | chr1.2:75826079-75826098 | MS.gene34450:intron | 40.0% |
| ! | TACTAAGCTACGGTTTTCGT+TGG | - | chr1.2:75827181-75827200 | MS.gene34450:intron | 40.0% |
| ! | TCAAATATTGACCGCCCTTT+TGG | - | chr1.2:75826398-75826417 | MS.gene34450:intron | 40.0% |
| ! | TCAAATGATGGGGCTTCTAA+TGG | - | chr1.2:75827907-75827926 | MS.gene34450:CDS | 40.0% |
| ! | TCTAGCTTGTAGTTGAAGTC+AGG | + | chr1.2:75825402-75825421 | None:intergenic | 40.0% |
| ! | TGACAATGGTAGCTTGGTTT+TGG | - | chr1.2:75825482-75825501 | MS.gene34450:CDS | 40.0% |
| ! | TTCTAAAGAGTCAGCTATGG+AGG | - | chr1.2:75825593-75825612 | MS.gene34450:intron | 40.0% |
| ! | TTTGGCATTGAGATTACTCC+TGG | - | chr1.2:75826352-75826371 | MS.gene34450:intron | 40.0% |
| ! | TTTTGTAGCTTCAGAGAGCA+TGG | - | chr1.2:75826764-75826783 | MS.gene34450:CDS | 40.0% |
| !! | GGGGAAGGTTGATTTTATGA+TGG | + | chr1.2:75825304-75825323 | None:intergenic | 40.0% |
| !! | GTCTGAGAGATGTTTTTGAG+AGG | + | chr1.2:75825350-75825369 | None:intergenic | 40.0% |
| !! | TTGCTTGATTTGGCTGACAA+TGG | - | chr1.2:75825468-75825487 | MS.gene34450:CDS | 40.0% |
| !!! | CACAACTAGTTTTGGGAGAT+AGG | - | chr1.2:75826550-75826569 | MS.gene34450:intron | 40.0% |
| !!! | CGATGCAATTTTTGAGTGAG+AGG | + | chr1.2:75827658-75827677 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTTCAGAAGAAG+AGG | - | chr1.2:75825496-75825515 | MS.gene34450:CDS | 40.0% |
| AAAAAAACCAGTCCCGCTCA+AGG | + | chr1.2:75826094-75826113 | None:intergenic | 45.0% | |
| AAAAGGGTGGTAGGTGTGAT+TGG | - | chr1.2:75827802-75827821 | MS.gene34450:CDS | 45.0% | |
| AGCTAAGATTTCCGCTCTCT+GGG | - | chr1.2:75827153-75827172 | MS.gene34450:intron | 45.0% | |
| AGCTGTGAAGCCAGATAATG+TGG | - | chr1.2:75825632-75825651 | MS.gene34450:intron | 45.0% | |
| AGCTTGTAGTTGAAGTCAGG+TGG | + | chr1.2:75825399-75825418 | None:intergenic | 45.0% | |
| AGTAGAATCCGAATAGGCAC+AGG | + | chr1.2:75827219-75827238 | None:intergenic | 45.0% | |
| ATCAGGTGGTCAAACTGCTT+TGG | - | chr1.2:75826334-75826353 | MS.gene34450:intron | 45.0% | |
| ATTGGCCGTAGCATAAACCT+CGG | - | chr1.2:75826120-75826139 | MS.gene34450:intron | 45.0% | |
| CAAAACACGGACCTTGAACA+TGG | + | chr1.2:75827026-75827045 | None:intergenic | 45.0% | |
| CAAGAGTTTAGTGAGGGACA+CGG | - | chr1.2:75827948-75827967 | MS.gene34450:CDS | 45.0% | |
| CAGCCAAATCAAGCAACTCA+GGG | + | chr1.2:75825464-75825483 | None:intergenic | 45.0% | |
| CATGTATAAGAGGCGGCAAT+AGG | + | chr1.2:75827611-75827630 | None:intergenic | 45.0% | |
| CCCTCACTAAACTCTTGACT+AGG | + | chr1.2:75827945-75827964 | None:intergenic | 45.0% | |
| CGGTGATTGGCATTGTCTTA+TGG | - | chr1.2:75827968-75827987 | MS.gene34450:CDS | 45.0% | |
| GCAGATTTCATTTCCAGAGC+TGG | - | chr1.2:75826012-75826031 | MS.gene34450:intron | 45.0% | |
| GCTTACCGAGGTTTATGCTA+CGG | + | chr1.2:75826128-75826147 | None:intergenic | 45.0% | |
| GTGCCTATTCGGATTCTACT+CGG | - | chr1.2:75827219-75827238 | MS.gene34450:CDS | 45.0% | |
| GTGGTAGGTGTGATTGGAAA+AGG | - | chr1.2:75827808-75827827 | MS.gene34450:CDS | 45.0% | |
| TAGCTAAGATTTCCGCTCTC+TGG | - | chr1.2:75827152-75827171 | MS.gene34450:intron | 45.0% | |
| TAGGACTTGTCACACGCAAA+AGG | + | chr1.2:75827687-75827706 | None:intergenic | 45.0% | |
| TCAGCCAAATCAAGCAACTC+AGG | + | chr1.2:75825465-75825484 | None:intergenic | 45.0% | |
| TCATTCCTCCAAGAAGGAAC+AGG | + | chr1.2:75825528-75825547 | None:intergenic | 45.0% | |
| TGAGATTTCGAGACCTTGCT+GGG | - | chr1.2:75827878-75827897 | MS.gene34450:CDS | 45.0% | |
| TTACCTCATCTCCAAAAGGG+CGG | + | chr1.2:75826412-75826431 | None:intergenic | 45.0% | |
| TTGAGATTTCGAGACCTTGC+TGG | - | chr1.2:75827877-75827896 | MS.gene34450:CDS | 45.0% | |
| TTGTAGTTGAAGTCAGGTGG+TGG | + | chr1.2:75825396-75825415 | None:intergenic | 45.0% | |
| TTTGGCTGACAATGGTAGCT+TGG | - | chr1.2:75825476-75825495 | MS.gene34450:CDS | 45.0% | |
| ! | AGAGCGTCTAGGATATCTAC+CGG | - | chr1.2:75826993-75827012 | MS.gene34450:intron | 45.0% |
| ! | ATCTTGCATGGTCTCTGAAG+CGG | - | chr1.2:75827758-75827777 | MS.gene34450:CDS | 45.0% |
| !! | AGTTGGCGCACAACTAGTTT+TGG | - | chr1.2:75826542-75826561 | MS.gene34450:intron | 45.0% |
| !! | CGAAAAGTGTCAGAGGAAGT+TGG | - | chr1.2:75826525-75826544 | MS.gene34450:CDS | 45.0% |
| !! | GAGCATGGAAGGCTTTGAAT+TGG | - | chr1.2:75826779-75826798 | MS.gene34450:CDS | 45.0% |
| !!! | GTTGGCGCACAACTAGTTTT+GGG | - | chr1.2:75826543-75826562 | MS.gene34450:intron | 45.0% |
| !!! | TTGAGCGGGACTGGTTTTTT+TGG | - | chr1.2:75826093-75826112 | MS.gene34450:intron | 45.0% |
| AGCATACATGATCCCAGCTC+TGG | + | chr1.2:75826028-75826047 | None:intergenic | 50.0% | |
| ATAAGAGGCGGCAATAGGGA+TGG | + | chr1.2:75827606-75827625 | None:intergenic | 50.0% | |
| CCTTGGAACCTGTGCCTATT+CGG | - | chr1.2:75827208-75827227 | MS.gene34450:CDS | 50.0% | |
| GAGCCGAGTAGAATCCGAAT+AGG | + | chr1.2:75827225-75827244 | None:intergenic | 50.0% | |
| GATATCCTAGACGCTCTACC+CGG | + | chr1.2:75826990-75827009 | None:intergenic | 50.0% | |
| TGCGTGTGACAAGTCCTACA+AGG | - | chr1.2:75827689-75827708 | MS.gene34450:CDS | 50.0% | |
| TTAGTGAGGGACACGGTGAT+TGG | - | chr1.2:75827955-75827974 | MS.gene34450:CDS | 50.0% | |
| TTGGTCCTGTTCCTTCTTGG+AGG | - | chr1.2:75825520-75825539 | MS.gene34450:CDS | 50.0% | |
| ! | ATGATGGGGCTTCTAATGGC+TGG | - | chr1.2:75827911-75827930 | MS.gene34450:CDS | 50.0% |
| ! | ATGTTTTCCTTGAGCGGGAC+TGG | - | chr1.2:75826084-75826103 | MS.gene34450:intron | 50.0% |
| ! | CGGTTTTCGTTGGGAATCCT+TGG | - | chr1.2:75827191-75827210 | MS.gene34450:CDS | 50.0% |
| ! | GGTTTGGTCCTGTTCCTTCT+TGG | - | chr1.2:75825517-75825536 | MS.gene34450:CDS | 50.0% |
| ! | GTAGCTTCAGAGAGCATGGA+AGG | - | chr1.2:75826768-75826787 | MS.gene34450:CDS | 50.0% |
| ! | TAGTTGAAGTCAGGTGGTGG+AGG | + | chr1.2:75825393-75825412 | None:intergenic | 50.0% |
| !! | CTTGGGAGTTGTAGCCTTGT+AGG | + | chr1.2:75827706-75827725 | None:intergenic | 50.0% |
| CCGAATAGGCACAGGTTCCA+AGG | + | chr1.2:75827211-75827230 | None:intergenic | 55.0% | |
| CCTTGAACATGGCACACTGC+CGG | + | chr1.2:75827015-75827034 | None:intergenic | 55.0% | |
| CTGGGCACCCTACTAAGCTA+CGG | - | chr1.2:75827171-75827190 | MS.gene34450:intron | 55.0% | |
| ! | TTAGTAGGGTGCCCAGAGAG+CGG | + | chr1.2:75827167-75827186 | None:intergenic | 55.0% |
| !! | ATGGTCTCTGAAGCGGAGCA+AGG | - | chr1.2:75827765-75827784 | MS.gene34450:CDS | 55.0% |
| !! | CGCTGCTCGAAAAGTGTCAG+AGG | - | chr1.2:75826518-75826537 | MS.gene34450:CDS | 55.0% |
| !! | CTGACACTTTTCGAGCAGCG+CGG | + | chr1.2:75826518-75826537 | None:intergenic | 55.0% |
| !! | TGACCGCCCTTTTGGAGATG+AGG | - | chr1.2:75826406-75826425 | MS.gene34450:intron | 55.0% |
| CCGGCAGTGTGCCATGTTCA+AGG | - | chr1.2:75827012-75827031 | MS.gene34450:intron | 60.0% | |
| CTAGACGCTCTACCCGGAAC+AGG | + | chr1.2:75826984-75827003 | None:intergenic | 60.0% | |
| ! | CTGTTCCGGGTAGAGCGTCT+AGG | - | chr1.2:75826982-75827001 | MS.gene34450:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 75825291 | 75828032 | 75825291 | ID=MS.gene34450 |
| chr1.2 | mRNA | 75825291 | 75828032 | 75825291 | ID=MS.gene34450.t1;Parent=MS.gene34450 |
| chr1.2 | exon | 75827657 | 75828032 | 75827657 | ID=MS.gene34450.t1.exon1;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75827657 | 75828032 | 75827657 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| chr1.2 | exon | 75827182 | 75827307 | 75827182 | ID=MS.gene34450.t1.exon2;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75827182 | 75827307 | 75827182 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| chr1.2 | exon | 75826896 | 75826984 | 75826896 | ID=MS.gene34450.t1.exon3;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75826896 | 75826984 | 75826896 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| chr1.2 | exon | 75826736 | 75826810 | 75826736 | ID=MS.gene34450.t1.exon4;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75826736 | 75826810 | 75826736 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| chr1.2 | exon | 75826444 | 75826551 | 75826444 | ID=MS.gene34450.t1.exon5;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75826444 | 75826551 | 75826444 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| chr1.2 | exon | 75825682 | 75825783 | 75825682 | ID=MS.gene34450.t1.exon6;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75825682 | 75825783 | 75825682 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| chr1.2 | exon | 75825291 | 75825566 | 75825291 | ID=MS.gene34450.t1.exon7;Parent=MS.gene34450.t1 |
| chr1.2 | CDS | 75825291 | 75825566 | 75825291 | ID=cds.MS.gene34450.t1;Parent=MS.gene34450.t1 |
| Gene Sequence |
| Protein sequence |
