AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61160.t1 MTR_4g009960 96.522 1639 53 3 1 1636 1 1638 0.0 3252
MS.gene61160.t1 MTR_4g009960 96.678 1144 34 3 1 1141 1 1143 0.0 2289
MS.gene61160.t1 MTR_4g009960 96.682 1115 33 3 1 1112 1 1114 0.0 2230
MS.gene61160.t1 MTR_8g027685 50.618 1456 585 30 25 1388 21 1434 0.0 1277
MS.gene61160.t1 MTR_3g027610 37.223 497 268 6 645 1098 773 1268 7.23e-93 332
MS.gene61160.t1 MTR_6g052190 68.421 76 24 0 1057 1132 67 142 7.37e-26 105
MS.gene61160.t1 MTR_0321s0030 32.692 104 70 0 645 748 382 485 4.22e-13 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61160.t1 AT1G15290 53.337 1693 645 31 1 1633 1 1608 0.0 1586
MS.gene61160.t1 AT1G15290 57.964 1375 483 18 1 1330 1 1325 0.0 1487
MS.gene61160.t1 AT4G28080 54.628 1426 540 26 1 1345 1 1400 0.0 1393
MS.gene61160.t1 AT1G01320 48.709 1433 595 26 25 1344 21 1426 0.0 1250
MS.gene61160.t1 AT1G01320 48.747 1436 588 27 25 1344 21 1424 0.0 1248
MS.gene61160.t1 AT1G01320 48.439 1441 595 27 25 1344 21 1434 0.0 1244
MS.gene61160.t1 AT3G52140 34.315 577 335 8 565 1098 679 1254 1.01e-88 319
MS.gene61160.t1 AT3G52140 23.133 415 264 10 1 393 79 460 9.48e-12 70.9
MS.gene61160.t1 AT3G52140 33.907 581 336 6 565 1098 679 1258 1.49e-88 318
MS.gene61160.t1 AT3G52140 23.133 415 264 10 1 393 79 460 1.27e-11 70.5
MS.gene61160.t1 AT3G52140 33.907 581 336 6 565 1098 691 1270 1.59e-88 318
MS.gene61160.t1 AT3G52140 33.510 567 334 6 565 1098 691 1247 3.12e-84 305

Find 321 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTGGTTCATCGTTATT+TGG 0.147486 4.2:-90186010 None:intergenic
CTATCAAAGCTCACTGTTAA+TGG 0.156321 4.2:+90190189 MS.gene61160:CDS
ATTACTTCCATCCTTGTTAT+TGG 0.166034 4.2:-90185882 None:intergenic
TCCACTCATTTCCCTTATTT+TGG 0.191149 4.2:-90190895 None:intergenic
AATAGATGGACGCAATTTAT+TGG 0.191703 4.2:+90187413 MS.gene61160:CDS
TGTTGATACATCGATATTTA+AGG 0.198758 4.2:+90184371 MS.gene61160:CDS
CACCCTCTCCTCCTCAGTTT+TGG 0.205881 4.2:-90184310 None:intergenic
TCCTCCTTAATTAAGGTTAA+AGG 0.227747 4.2:+90180018 MS.gene61160:intron
TACACACGTGCGAAGGTTAT+TGG 0.230875 4.2:+90182283 MS.gene61160:CDS
TTCTTAGTAGACATGGCTTT+AGG 0.241111 4.2:-90180074 None:intergenic
TTCTTGGGCTTTGATGAGTC+TGG 0.246046 4.2:-90182359 None:intergenic
GGTTGTGTCATTCCTGTAAC+TGG 0.257374 4.2:-90190238 None:intergenic
ATATATGTAGCAGCTGTATT+TGG 0.261955 4.2:-90188442 None:intergenic
TCCAGCATCATTGAGTTCTT+TGG 0.262086 4.2:+90190359 MS.gene61160:CDS
TGAGAGTTGTTATCACTTAC+TGG 0.262258 4.2:-90189892 None:intergenic
ATTTCGATATCCTGAACTTT+AGG 0.265597 4.2:-90185283 None:intergenic
TCTACTTGAGAAGCACTTCT+TGG 0.269825 4.2:-90190963 None:intergenic
GATGGGAACTTGGTTCTTCT+TGG 0.274238 4.2:+90185816 MS.gene61160:CDS
AGGACTAAAGATGGGATCTT+TGG 0.280296 4.2:+90186573 MS.gene61160:CDS
CTGTAATACAACGGTGATCT+AGG 0.280296 4.2:-90190837 None:intergenic
TTTCATGCGGAATGTATAAT+TGG 0.282372 4.2:-90190862 None:intergenic
TCGAAAATTGCTCTTGATAA+AGG 0.284820 4.2:+90187441 MS.gene61160:CDS
AGAAAGTTATCTATTCTTAG+AGG 0.288515 4.2:+90187075 MS.gene61160:CDS
TTCTTCCTCCTGCTGCTGCC+AGG 0.289518 4.2:+90190802 MS.gene61160:CDS
AACACAGTTCGACCAAAATA+AGG 0.290171 4.2:+90190883 MS.gene61160:CDS
AGAGCATTTGCGCCTCCTTC+TGG 0.294069 4.2:-90185316 None:intergenic
CCTTGCTATCTCTGACTTCT+CGG 0.294867 4.2:-90191030 None:intergenic
AACATAGCTGAAGCTACTTT+TGG 0.295161 4.2:-90190279 None:intergenic
CTTGAACTTTCTCCTGTTGA+TGG 0.295448 4.2:+90186520 MS.gene61160:CDS
AGGAGATTACTTTCAGCTTC+AGG 0.298242 4.2:+90182766 MS.gene61160:CDS
AGGGCACTGCTTCACAAATC+TGG 0.300618 4.2:+90185653 MS.gene61160:CDS
TCTTAGTAGACATGGCTTTA+GGG 0.301222 4.2:-90180073 None:intergenic
CTTGCAGTATTTCGATGATA+TGG 0.302415 4.2:-90187610 None:intergenic
GACTGATCAATGCAGGCTTA+TGG 0.313310 4.2:+90183845 MS.gene61160:intron
ATAAAGAATAGTTTGTAAAA+TGG 0.314149 4.2:-90179853 None:intergenic
GCAATGGATGTGTCTGTCTT+TGG 0.316597 4.2:-90189297 None:intergenic
TGGGCCTGCTATGTTGCGTT+TGG 0.319442 4.2:-90182339 None:intergenic
CGAGAGGAACTGGACTTAAA+TGG 0.320911 4.2:-90190731 None:intergenic
TAAGACAGAGAAGAAGAAAA+AGG 0.321667 4.2:+90179474 MS.gene61160:CDS
CGAGACGCGGACAACGTTCC+TGG 0.330969 4.2:-90190708 None:intergenic
GGGTGGCAATGGTGGTGGCC+AGG 0.334781 4.2:+90184221 MS.gene61160:CDS
AGCCATAGCACTTTCATTGA+TGG 0.337066 4.2:+90188674 MS.gene61160:CDS
TGGTTCTTCGGTTCCATGTT+TGG 0.338224 4.2:-90190013 None:intergenic
CTTGAGGATGCTGTTAGTTA+TGG 0.341383 4.2:+90187468 MS.gene61160:CDS
GTTTCTCCATTCGGTGTTAC+GGG 0.348777 4.2:-90182425 None:intergenic
TAATGTAACATTACCAGCTT+TGG 0.358993 4.2:-90186399 None:intergenic
TCATACTTTCCAAAGGGCTT+AGG 0.366427 4.2:-90187237 None:intergenic
ATGCTTCTAAAGATCTTGTT+AGG 0.366508 4.2:+90185729 MS.gene61160:CDS
AGTGCTTCTCAAGTAGAAAA+TGG 0.366802 4.2:+90190969 MS.gene61160:CDS
GATAATCATCACCCAAAGTT+TGG 0.372384 4.2:-90186975 None:intergenic
CATACTTTCCAAAGGGCTTA+GGG 0.372446 4.2:-90187236 None:intergenic
AGATTCTTTGAGACGCAAAA+AGG 0.373916 4.2:-90186068 None:intergenic
ATGTAGTGTGTCAGATCTCC+TGG 0.379389 4.2:+90189421 MS.gene61160:intron
ACTGATTTCATGCATTTAAG+AGG 0.382173 4.2:+90186553 MS.gene61160:CDS
GGTTTCTCCATTCGGTGTTA+CGG 0.383835 4.2:-90182426 None:intergenic
GACGCCGGCGGCTCCGACAT+TGG 0.386095 4.2:-90182461 None:intergenic
CAAATGCTCTTAACATCAAT+AGG 0.386217 4.2:+90185329 MS.gene61160:CDS
TGATTCACAAATTGTATTGA+AGG 0.386441 4.2:+90179671 MS.gene61160:CDS
TGTACAAGGAAGCCAGTTAC+AGG 0.388012 4.2:+90190226 MS.gene61160:CDS
ATTATCATCTCAAAATTCAT+TGG 0.388705 4.2:+90186992 MS.gene61160:CDS
TACCTGCTGAGGATGAAAAC+TGG 0.388867 4.2:+90184199 MS.gene61160:CDS
TATATGCTCGCGAGAGGAAC+TGG 0.390116 4.2:-90190741 None:intergenic
CGTTCCTGGGCTGAAAGGTT+TGG 0.393130 4.2:-90190694 None:intergenic
TTGCTTTCCAAGACCTTTCA+CGG 0.393856 4.2:-90185915 None:intergenic
CGGTCGATTCGATGGGAACT+TGG 0.396649 4.2:+90185806 MS.gene61160:CDS
CAGTTTGGCAATCTTCCATA+TGG 0.398005 4.2:+90184111 MS.gene61160:intron
GCCAATTCAAAAGGGCGTTC+AGG 0.401801 4.2:+90190123 MS.gene61160:CDS
AAGCTTGCTTCCATTTGTTT+CGG 0.401819 4.2:-90190661 None:intergenic
AATACAATTTGTGAATCATA+AGG 0.403344 4.2:-90179666 None:intergenic
GGGCCTGCTATGTTGCGTTT+GGG 0.403564 4.2:-90182338 None:intergenic
GTCTAGTCTGAATTCTTCTC+CGG 0.404535 4.2:+90184428 MS.gene61160:CDS
TGCAAGGAAACCTAAAGTTC+AGG 0.408345 4.2:+90185273 MS.gene61160:CDS
ATATATAAATGTTGCTATGA+TGG 0.408945 4.2:+90188459 MS.gene61160:CDS
GCAGCAGCAGGAGGAAGAAC+AGG 0.409432 4.2:-90190798 None:intergenic
TTATGATGTTTGTAGTTTGA+GGG 0.410773 4.2:+90185634 MS.gene61160:intron
TAAATGCAACAAAAGATTGT+TGG 0.411016 4.2:+90188534 MS.gene61160:CDS
TCTTGGGCTTTGATGAGTCT+GGG 0.411100 4.2:-90182358 None:intergenic
GGTGGCAATGGTGGTGGCCA+GGG 0.415543 4.2:+90184222 MS.gene61160:CDS
GTGGGATGCTCCTCAATAGA+TGG 0.417473 4.2:+90187399 MS.gene61160:CDS
TCTTCCTCCTGCTGCTGCCA+GGG 0.417626 4.2:+90190803 MS.gene61160:CDS
GAGAGAGACTCACGCAAAAT+CGG 0.418260 4.2:-90182578 None:intergenic
ATAGCCTGCACAACAAAATT+CGG 0.418569 4.2:+90182311 MS.gene61160:CDS
GGTGGTGGCCAGGGAAGAAA+TGG 0.420387 4.2:+90184231 MS.gene61160:CDS
GGAATCCATCGAAAAGATAA+AGG 0.422672 4.2:+90185763 MS.gene61160:CDS
GCCGCCGGCGTCGCCGATAT+CGG 0.423071 4.2:+90182472 MS.gene61160:CDS
CCAGCCGTCAATTTGTGCTT+CGG 0.423507 4.2:+90191346 MS.gene61160:CDS
GAGCCAGCCGTGAAAGGTCT+TGG 0.423819 4.2:+90185908 MS.gene61160:CDS
CAAGGGACCCTGGCAGCAGC+AGG 0.424951 4.2:-90190810 None:intergenic
ATGGAGTCCCCTAAGCCCTT+TGG 0.425143 4.2:+90187228 MS.gene61160:CDS
TTTGTAAGATATAGACTTTG+AGG 0.425238 4.2:-90190382 None:intergenic
CATATTCTCCATTTCTTCCC+TGG 0.425829 4.2:-90184239 None:intergenic
TGGCAAGAAGCCAATTCAAA+AGG 0.429959 4.2:+90190114 MS.gene61160:CDS
ATGACAGGACACTTCTTCCT+TGG 0.430427 4.2:+90185189 MS.gene61160:intron
CAATTCAGCGACTCCATTTG+TGG 0.432158 4.2:-90191318 None:intergenic
AAATGCAACAAAAGATTGTT+GGG 0.434777 4.2:+90188535 MS.gene61160:CDS
GATTTGTAGTTGTCACAAAC+AGG 0.435823 4.2:+90191276 MS.gene61160:CDS
ATTCCCACATTCTCCGATAT+CGG 0.436332 4.2:-90182485 None:intergenic
TTCAGAAGAATTTAATCAAA+GGG 0.436478 4.2:+90184562 MS.gene61160:CDS
GGACTAAAGATGGGATCTTT+GGG 0.437182 4.2:+90186574 MS.gene61160:CDS
CAAAATCACACCTTGCAAAC+GGG 0.444180 4.2:-90187276 None:intergenic
CTGCTCTTCACTGTCATCGC+TGG 0.444835 4.2:-90191234 None:intergenic
TTTCCCTTTGAATCGTTGTC+AGG 0.444893 4.2:-90189455 None:intergenic
ACAAAATCACACCTTGCAAA+CGG 0.444971 4.2:-90187277 None:intergenic
TCTTGTTAGGAAGGTGGTTG+AGG 0.447707 4.2:+90185742 MS.gene61160:CDS
GAAGTGGTTGCTTCAGAGAA+AGG 0.447727 4.2:+90183308 MS.gene61160:CDS
CTCCATTCGGTGTTACGGGT+GGG 0.448376 4.2:-90182421 None:intergenic
ATAAGGGAAATGAGTGGATC+AGG 0.449824 4.2:+90190900 MS.gene61160:CDS
TCTAATTCATTCAAACTACT+TGG 0.453697 4.2:-90186025 None:intergenic
TTTCAAAACGGTCGATTCGA+TGG 0.453948 4.2:+90185798 MS.gene61160:CDS
GCAAAATCTTCCGAAACAAA+TGG 0.456183 4.2:+90190651 MS.gene61160:CDS
GTAGTTGTACGTGGTGGAAA+TGG 0.457295 4.2:+90184492 MS.gene61160:CDS
AACGCTGCTAATCGCAAGTC+TGG 0.458576 4.2:+90190147 MS.gene61160:CDS
GATGCCACAAAAGCAGTAGA+AGG 0.460250 4.2:+90189970 MS.gene61160:CDS
TGGATCTGGTCTTCATATGA+AGG 0.460327 4.2:+90186090 MS.gene61160:CDS
GATATAAATGAGAGGGAGCT+TGG 0.460735 4.2:+90188177 MS.gene61160:CDS
AAGCCCAAACGCAACATAGC+AGG 0.461247 4.2:+90182335 MS.gene61160:CDS
TGAAGATACAGACCAAACTT+TGG 0.463745 4.2:+90186963 MS.gene61160:CDS
CCGACATTGGTGACCCGACC+CGG 0.465203 4.2:-90182448 None:intergenic
GGCCACCATTTATCAGCAAA+AGG 0.466134 4.2:+90188149 MS.gene61160:intron
AACTACACTTAAGATACTTC+AGG 0.466443 4.2:+90188728 MS.gene61160:CDS
CCGACCCGGGTTTCTCCATT+CGG 0.467984 4.2:-90182434 None:intergenic
AACTGGGGTGGCAATGGTGG+TGG 0.469077 4.2:+90184216 MS.gene61160:CDS
GAAGATACAGACCAAACTTT+GGG 0.470379 4.2:+90186964 MS.gene61160:CDS
CGTCTCAAAGAATCTGGATC+TGG 0.471440 4.2:+90186076 MS.gene61160:CDS
GTATTCGATCGGAGTCCATA+TGG 0.473944 4.2:-90184126 None:intergenic
ACACAGTTCGACCAAAATAA+GGG 0.478278 4.2:+90190884 MS.gene61160:CDS
ATTTAAATTATTGAAGAAGA+GGG 0.482111 4.2:+90185937 MS.gene61160:CDS
GCGAGCATATATGATGCAAA+TGG 0.483644 4.2:+90190753 MS.gene61160:CDS
CATTTATCAGCAAAAGGCGT+TGG 0.484364 4.2:+90188155 MS.gene61160:CDS
GTCACCAATGTCGGAGCCGC+CGG 0.484772 4.2:+90182457 MS.gene61160:CDS
GATGAAAACTGGGGTGGCAA+TGG 0.485824 4.2:+90184210 MS.gene61160:CDS
TCTGCACAATTTATGTCACT+TGG 0.486714 4.2:-90185968 None:intergenic
CAATGCAGGACGCGGCTGCA+TGG 0.489380 4.2:+90189217 MS.gene61160:intron
TGTTCAGATTCATCTTGTTG+TGG 0.489492 4.2:-90190579 None:intergenic
GAAGAGCAGGACAATTTAGA+TGG 0.490228 4.2:+90191248 MS.gene61160:CDS
CTTGTTATTGGAACTGCCAT+CGG 0.490398 4.2:-90185870 None:intergenic
AAAGCCATGTCTACTAAGAA+TGG 0.491079 4.2:+90180077 MS.gene61160:CDS
TCATCCTCAGCAGGTAGAGC+TGG 0.492701 4.2:-90184192 None:intergenic
GCCAAAGAACTCAATGATGC+TGG 0.495505 4.2:-90190360 None:intergenic
TCATCCGACGCCGAAGTTGT+CGG 0.498028 4.2:+90182517 MS.gene61160:CDS
AAGGTGACCTTTACTTGCAA+TGG 0.500614 4.2:-90189313 None:intergenic
GTAAGTGTACGACCATCAAC+AGG 0.501736 4.2:-90186532 None:intergenic
ACTTGATGTGAGGAAGCTAT+TGG 0.502522 4.2:+90179811 MS.gene61160:CDS
TTTCCAAGACCTTTCACGGC+TGG 0.504354 4.2:-90185911 None:intergenic
GAGACGCGGACAACGTTCCT+GGG 0.505785 4.2:-90190707 None:intergenic
AAGATACTTCAGGCGAAGCT+TGG 0.506461 4.2:+90188738 MS.gene61160:CDS
CTCTTCATCAGAACTTGAGA+AGG 0.506940 4.2:+90190608 MS.gene61160:CDS
ACCTGCTGAGGATGAAAACT+GGG 0.507757 4.2:+90184200 MS.gene61160:CDS
CCTGACACAATGAAAAGCTA+TGG 0.509610 4.2:+90188210 MS.gene61160:CDS
GACTCCATGTCATAATCTCT+AGG 0.510149 4.2:-90187213 None:intergenic
TAGTCCTGACAACGATTCAA+AGG 0.510179 4.2:+90189451 MS.gene61160:CDS
GAAGAAGATGATAGAGGCAA+AGG 0.512391 4.2:+90182746 MS.gene61160:CDS
CAGCCTTGTTCCCGTTTGCA+AGG 0.512432 4.2:+90187266 MS.gene61160:CDS
GAAAACTGGGGTGGCAATGG+TGG 0.512966 4.2:+90184213 MS.gene61160:CDS
TCTCCATTCGGTGTTACGGG+TGG 0.513307 4.2:-90182422 None:intergenic
CGAGCATATATGATGCAAAT+GGG 0.513641 4.2:+90190754 MS.gene61160:CDS
CTGACACAATGAAAAGCTAT+GGG 0.516207 4.2:+90188211 MS.gene61160:CDS
TTGCAAGTAAAGGTCACCTT+AGG 0.517425 4.2:+90189316 MS.gene61160:CDS
GCATTTAAGAGGACTAAAGA+TGG 0.519513 4.2:+90186564 MS.gene61160:CDS
TGAAGGTTAAAATCAGCAAT+GGG 0.521471 4.2:+90183276 MS.gene61160:intron
GTTCAGAAGAATTTAATCAA+AGG 0.522982 4.2:+90184561 MS.gene61160:CDS
GCAAAGATGATGACTGTTTG+TGG 0.524974 4.2:+90187586 MS.gene61160:CDS
CTGAAGGAAGAAGATGATAG+AGG 0.525936 4.2:+90182740 MS.gene61160:CDS
AGTCCTGACAACGATTCAAA+GGG 0.527770 4.2:+90189452 MS.gene61160:CDS
GAGAATATGAACGTCGACCA+TGG 0.529840 4.2:+90184253 MS.gene61160:CDS
CAATGAAAGTGCTATGGCTA+TGG 0.530414 4.2:-90188670 None:intergenic
GAAAGTTATCTATTCTTAGA+GGG 0.530875 4.2:+90187076 MS.gene61160:CDS
GACACATCCATTGCAAGTAA+AGG 0.533529 4.2:+90189306 MS.gene61160:CDS
TTTGAAGAAATGTGAACTGA+AGG 0.535413 4.2:+90182724 MS.gene61160:CDS
ATAATATCATACTTTCCAAA+GGG 0.536399 4.2:-90187243 None:intergenic
AAACTATTCTTTATCTCATG+AGG 0.537567 4.2:+90179862 MS.gene61160:CDS
TTCTAAAGATCTTGTTAGGA+AGG 0.540024 4.2:+90185733 MS.gene61160:CDS
TAAATTGCGTCCATCTATTG+AGG 0.540829 4.2:-90187409 None:intergenic
TTCTCCGATATCGGCGACGC+CGG 0.541241 4.2:-90182476 None:intergenic
GGCAAGAAGCCAATTCAAAA+GGG 0.541383 4.2:+90190115 MS.gene61160:CDS
CAGCGATGACAGTGAAGAGC+AGG 0.541437 4.2:+90191235 MS.gene61160:CDS
GATGGGATCTTTGGGTGAAG+TGG 0.541732 4.2:+90186582 MS.gene61160:CDS
GATAATATCATACTTTCCAA+AGG 0.541815 4.2:-90187244 None:intergenic
GTTGGGAGCAGATCATATAC+AGG 0.541942 4.2:+90188552 MS.gene61160:CDS
AGAAGAATTCAGACTAGACT+TGG 0.542045 4.2:-90184424 None:intergenic
CGAATGGAGAAACCCGGGTC+GGG 0.543694 4.2:+90182435 MS.gene61160:CDS
TTCCAAAACTGAGGAGGAGA+GGG 0.548087 4.2:+90184308 MS.gene61160:CDS
AATTTAAATTATTGAAGAAG+AGG 0.548721 4.2:+90185936 MS.gene61160:CDS
AATGTTGCTATGATGGAAGA+AGG 0.549010 4.2:+90188466 MS.gene61160:CDS
TTCTCTTGTAGACATTATTG+TGG 0.549228 4.2:+90179638 MS.gene61160:CDS
ACAGACCGCATGTGAAATGT+AGG 0.549846 4.2:-90188414 None:intergenic
GCACTTCTTGGAACAAACTC+AGG 0.551151 4.2:-90190951 None:intergenic
TGTCAGGACTAATAAAATCC+AGG 0.551229 4.2:-90189439 None:intergenic
TCCGATATCGGCGACGCCGG+CGG 0.551539 4.2:-90182473 None:intergenic
GGGACCCTGGCAGCAGCAGG+AGG 0.554089 4.2:-90190807 None:intergenic
ATGGACTCCGATCGAATACA+TGG 0.555519 4.2:+90184130 MS.gene61160:CDS
GGCAGTTCCAATAACAAGGA+TGG 0.555747 4.2:+90185875 MS.gene61160:CDS
TGCTATGATGGAAGAAGGCA+TGG 0.555990 4.2:+90188471 MS.gene61160:CDS
CAGGACAATTTAGATGGTGA+AGG 0.556051 4.2:+90191254 MS.gene61160:CDS
CCGTCTGCAACATATTGAGC+TGG 0.557066 4.2:+90188254 MS.gene61160:CDS
TCTGGAGCTGATTCATCAGA+AGG 0.557326 4.2:+90185671 MS.gene61160:CDS
AGACATCATCTGATGAAGGT+TGG 0.559635 4.2:+90190094 MS.gene61160:CDS
AGCCCACCCGTAACACCGAA+TGG 0.560880 4.2:+90182419 MS.gene61160:CDS
CCGAGAAGTCAGAGATAGCA+AGG 0.561618 4.2:+90191030 MS.gene61160:CDS
TTCAAAACGGTCGATTCGAT+GGG 0.561855 4.2:+90185799 MS.gene61160:CDS
TGGCTAGTTGCTCCATCCGT+TGG 0.563157 4.2:+90184150 MS.gene61160:CDS
TGCGTATAGTCTTCTTGCTG+TGG 0.563419 4.2:+90187633 MS.gene61160:CDS
TGTCTACTAAGAATGGTTGA+AGG 0.563623 4.2:+90180084 MS.gene61160:CDS
TAAAGATCTTGTTAGGAAGG+TGG 0.563770 4.2:+90185736 MS.gene61160:CDS
ATGAAGGTTAAAATCAGCAA+TGG 0.565638 4.2:+90183275 MS.gene61160:intron
TGTAATACAACGGTGATCTA+GGG 0.566284 4.2:-90190836 None:intergenic
TCAACCATTCTTAGTAGACA+TGG 0.567302 4.2:-90180081 None:intergenic
GACAACGTTCCTGGGCTGAA+AGG 0.567359 4.2:-90190699 None:intergenic
AATGGCTTTAAAACTGTACC+TGG 0.567677 4.2:-90190423 None:intergenic
CGAACCGAAGCACAAATTGA+CGG 0.568612 4.2:-90191350 None:intergenic
ATTTCAAAATCTGTTGCCCA+TGG 0.568824 4.2:-90184270 None:intergenic
TTCCATCAATGAAAGTGCTA+TGG 0.569017 4.2:-90188676 None:intergenic
ACAATAATGTCTACAAGAGA+AGG 0.569410 4.2:-90179636 None:intergenic
TTCTCTTCCTTCCAAAACTG+AGG 0.569915 4.2:+90184299 MS.gene61160:CDS
TCTAGTCTGAATTCTTCTCC+GGG 0.570141 4.2:+90184429 MS.gene61160:CDS
GAAAGAGATTCACCAACGGA+TGG 0.571329 4.2:-90184162 None:intergenic
CCGGGTCGGGTCACCAATGT+CGG 0.572438 4.2:+90182448 MS.gene61160:CDS
GTCGCCGATATCGGAGAATG+TGG 0.573057 4.2:+90182481 MS.gene61160:CDS
GCAGCCAAACCTTTCAGCCC+AGG 0.574768 4.2:+90190690 MS.gene61160:CDS
TAACATTACCAGCTTTGGCA+AGG 0.575724 4.2:-90186394 None:intergenic
AACGGTGATCTAGGGCCACA+AGG 0.575937 4.2:-90190828 None:intergenic
TATGATGCAAATGGGAGTCA+AGG 0.576434 4.2:+90190762 MS.gene61160:CDS
CACAGAAGATCTTCGAACTC+AGG 0.577385 4.2:+90188761 MS.gene61160:CDS
AAGAGCCAAGTGTTTCAAAA+CGG 0.577737 4.2:+90185786 MS.gene61160:CDS
CCGAAGCACAAATTGACGGC+TGG 0.579050 4.2:-90191346 None:intergenic
GTGAACAACAACTACGGCCA+AGG 0.579822 4.2:-90185206 None:intergenic
TGAAGTTGCCTTGCCAAAGC+TGG 0.581024 4.2:+90186386 MS.gene61160:CDS
CGATGGCAGTTCCAATAACA+AGG 0.581847 4.2:+90185871 MS.gene61160:CDS
TCTAGGGCCACAAGGGACCC+TGG 0.583121 4.2:-90190820 None:intergenic
TATGAGACATCATCTGATGA+AGG 0.583464 4.2:+90190090 MS.gene61160:CDS
ATCGGAGAATGTGGGAATGG+TGG 0.586574 4.2:+90182490 MS.gene61160:CDS
AATGTCGAGCCAGCCGTGAA+AGG 0.590201 4.2:+90185902 MS.gene61160:CDS
TGCTGTTAGTTATGGAACAA+AGG 0.590951 4.2:+90187476 MS.gene61160:CDS
GAAGCTATTGGCTGTGAAGG+TGG 0.592150 4.2:+90179823 MS.gene61160:CDS
CATTTAAGAGGACTAAAGAT+GGG 0.592361 4.2:+90186565 MS.gene61160:CDS
CAACTAGCCATGTATTCGAT+CGG 0.592555 4.2:-90184137 None:intergenic
ACACCTTGCAAACGGGAACA+AGG 0.593546 4.2:-90187269 None:intergenic
TGTTATGCATCGAGATCAAG+TGG 0.596945 4.2:+90184455 MS.gene61160:CDS
ATGATGCTCAACGGAAACAA+AGG 0.597829 4.2:+90189477 MS.gene61160:CDS
CGACATTGGTGACCCGACCC+GGG 0.598246 4.2:-90182447 None:intergenic
GAAGTCGCTGCTGCACCACC+AGG 0.600031 4.2:+90190405 MS.gene61160:CDS
ACTCCATGTCATAATCTCTA+GGG 0.600607 4.2:-90187212 None:intergenic
CTTCCAAAACTGAGGAGGAG+AGG 0.601277 4.2:+90184307 MS.gene61160:CDS
TCCATTGTAGTTGTACGTGG+TGG 0.601584 4.2:+90184486 MS.gene61160:CDS
TGGTCGAACTGTGTTTCATG+CGG 0.602284 4.2:-90190875 None:intergenic
GATATCGGAGAATGTGGGAA+TGG 0.602646 4.2:+90182487 MS.gene61160:CDS
TCTTCCTTCCAAAACTGAGG+AGG 0.604568 4.2:+90184302 MS.gene61160:CDS
ATACAAAGTGATTGTATGTG+TGG 0.605175 4.2:-90186814 None:intergenic
GCTGCTGCCAGGGTCCCTTG+TGG 0.605816 4.2:+90190813 MS.gene61160:CDS
ACAGCTACAGTGAAGGCTGT+TGG 0.607642 4.2:+90185241 MS.gene61160:CDS
TCATCAAAATGCTGATGCTG+TGG 0.607803 4.2:+90191085 MS.gene61160:CDS
ATGGCCCCAAAATCAGGGAA+AGG 0.608175 4.2:+90179436 MS.gene61160:CDS
AAATCCGACAACTTCGGCGT+CGG 0.609901 4.2:-90182521 None:intergenic
ATACTTTCCAAAGGGCTTAG+GGG 0.611042 4.2:-90187235 None:intergenic
GAAATGTTCATGTGGCACTT+CGG 0.611665 4.2:+90188494 MS.gene61160:CDS
CTTCTGCAACAGCTCAGCAG+AGG 0.612287 4.2:+90183380 MS.gene61160:CDS
CTTTCCAGCTCTACCTGCTG+AGG 0.612344 4.2:+90184188 MS.gene61160:CDS
GGCGTTGGATATAAATGAGA+GGG 0.613340 4.2:+90188170 MS.gene61160:CDS
GATGAGCCTAAAGTTAGTGA+AGG 0.613402 4.2:+90191107 MS.gene61160:CDS
AGAATATGAACGTCGACCAT+GGG 0.613802 4.2:+90184254 MS.gene61160:CDS
CTGTTGGTAATGCGAATGCA+AGG 0.614545 4.2:+90185257 MS.gene61160:CDS
CAAAGGGAAATGATGCTCAA+CGG 0.615314 4.2:+90189468 MS.gene61160:CDS
CTGGAGCTGATTCATCAGAA+GGG 0.615615 4.2:+90185672 MS.gene61160:CDS
ACAGCTTCAACTGTCACCAC+TGG 0.616013 4.2:-90190066 None:intergenic
AGAGACTCACGCAAAATCGG+AGG 0.616020 4.2:-90182575 None:intergenic
ACAGTGAGCTTTGATAGAAG+AGG 0.618015 4.2:-90190183 None:intergenic
TTCCTCCTACATTTCACATG+CGG 0.618216 4.2:+90188409 MS.gene61160:CDS
AGTGTCGAGGCAATGACTGA+AGG 0.618463 4.2:-90186913 None:intergenic
AAACAGGAAAATTCAACCGA+TGG 0.618685 4.2:+90185854 MS.gene61160:CDS
TTCTGATAATCACATGTACA+AGG 0.619711 4.2:+90190212 MS.gene61160:CDS
TGGATATACAGCTACAGTGA+AGG 0.619964 4.2:+90185234 MS.gene61160:CDS
ACGGAAACAAAGGCGTCCAA+AGG 0.622969 4.2:+90189487 MS.gene61160:CDS
GAAATAGATGATCAACCAGA+AGG 0.623748 4.2:+90185301 MS.gene61160:CDS
GGAACAAACTCAGGAGCATG+TGG 0.623868 4.2:-90190942 None:intergenic
GAAGAAACAAAAGCCAAACA+TGG 0.625483 4.2:+90190000 MS.gene61160:CDS
GCAAGTCTGGACGCAGACAA+CGG 0.626501 4.2:+90190160 MS.gene61160:CDS
ACGGTGATCTAGGGCCACAA+GGG 0.627019 4.2:-90190827 None:intergenic
TCTTGATAAAGGAAAGCTTG+AGG 0.627831 4.2:+90187452 MS.gene61160:CDS
TCTCGATGCATAACAGAACC+CGG 0.627926 4.2:-90184447 None:intergenic
CAATGGGAAAGTAATAGAAG+TGG 0.628378 4.2:+90183292 MS.gene61160:CDS
TCTTAGAGGGCTCTGTCACA+AGG 0.629150 4.2:+90187089 MS.gene61160:CDS
TGCAGCTATACAGCATGTGA+TGG 0.629382 4.2:+90184398 MS.gene61160:CDS
CAAGTCATCAAAATTTGACA+AGG 0.633172 4.2:-90185705 None:intergenic
GACCGCATGTGAAATGTAGG+AGG 0.635785 4.2:-90188411 None:intergenic
TGGACTTAAATGGCGAGACG+CGG 0.637164 4.2:-90190721 None:intergenic
TCCACCACGTACAACTACAA+TGG 0.637446 4.2:-90184487 None:intergenic
CTGATAAGATACTTGATGTG+AGG 0.638400 4.2:+90179801 MS.gene61160:CDS
TAACACCGAATGGAGAAACC+CGG 0.639631 4.2:+90182429 MS.gene61160:CDS
CCAGCTCAATATGTTGCAGA+CGG 0.645176 4.2:-90188254 None:intergenic
AAGCAACTACACACGTGCGA+AGG 0.649155 4.2:+90182276 MS.gene61160:CDS
GTCTCTACAGAGTCACACAT+TGG 0.649163 4.2:+90183352 MS.gene61160:CDS
GCATCATATATGCTCGCGAG+AGG 0.650020 4.2:-90190747 None:intergenic
GCTGTGGTTCTCTACCACAC+AGG 0.652971 4.2:+90187649 MS.gene61160:CDS
AGGCGTTGGATATAAATGAG+AGG 0.654787 4.2:+90188169 MS.gene61160:CDS
ACAGTGGTGAACAACAACTA+CGG 0.656822 4.2:-90185212 None:intergenic
AGGCATGGGAAATGTTCATG+TGG 0.658266 4.2:+90188486 MS.gene61160:CDS
GGATCTGTATCAGCATCAGA+AGG 0.658933 4.2:-90190558 None:intergenic
CCTGGTTAAAATCTCCTGTG+TGG 0.659202 4.2:-90187663 None:intergenic
ACCAAAATAAGGGAAATGAG+TGG 0.661708 4.2:+90190894 MS.gene61160:CDS
CCGAATGGAGAAACCCGGGT+CGG 0.663804 4.2:+90182434 MS.gene61160:CDS
ATAGATGATCAACCAGAAGG+AGG 0.665377 4.2:+90185304 MS.gene61160:CDS
GAGGAAGCTATTGGCTGTGA+AGG 0.666270 4.2:+90179820 MS.gene61160:CDS
TCGCCGATATCGGAGAATGT+GGG 0.668154 4.2:+90182482 MS.gene61160:CDS
GCTGAGGATGAAAACTGGGG+TGG 0.669493 4.2:+90184204 MS.gene61160:CDS
GCCCATAATCAAAACAAGAG+CGG 0.671925 4.2:+90182392 MS.gene61160:CDS
TCTCAGCATGCACAAGCCAG+TGG 0.675509 4.2:+90190050 MS.gene61160:CDS
AAGTGACATAAATTGTGCAG+AGG 0.677511 4.2:+90185970 MS.gene61160:CDS
GTTTGAAAGAGATTCACCAA+CGG 0.679876 4.2:-90184166 None:intergenic
AACACCGAATGGAGAAACCC+GGG 0.682311 4.2:+90182430 MS.gene61160:CDS
TAATTGGTTCTGTAATACAA+CGG 0.683200 4.2:-90190846 None:intergenic
AGGGAAATGAGTGGATCAGG+TGG 0.683861 4.2:+90190903 MS.gene61160:CDS
TTATCCATTGTAGTTGTACG+TGG 0.684216 4.2:+90184483 MS.gene61160:CDS
GTAGTTGTTGTTCACCACTG+TGG 0.690388 4.2:+90185214 MS.gene61160:CDS
GGTGGATGAGCTTATCAACA+TGG 0.709276 4.2:+90186347 MS.gene61160:CDS
GTTCCCTAGAGATTATGACA+TGG 0.726585 4.2:+90187209 MS.gene61160:CDS
GTTATGCATCGAGATCAAGT+GGG 0.737440 4.2:+90184456 MS.gene61160:CDS
GGCTTTAAAACTGTACCTGG+TGG 0.745453 4.2:-90190420 None:intergenic
GCTATGATGGAAGAAGGCAT+GGG 0.746131 4.2:+90188472 MS.gene61160:CDS
CTGTAGCTGTATATCCACAG+TGG 0.760165 4.2:-90185228 None:intergenic
TGACACAATGAAAAGCTATG+GGG 0.760596 4.2:+90188212 MS.gene61160:CDS
CCTGCTGAGGATGAAAACTG+GGG 0.763661 4.2:+90184201 MS.gene61160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 90179436 90191376 90179436 ID=MS.gene61160
chr4.2 mRNA 90179436 90191376 90179436 ID=MS.gene61160.t1;Parent=MS.gene61160
chr4.2 exon 90179436 90179505 90179436 ID=MS.gene61160.t1.exon1;Parent=MS.gene61160.t1
chr4.2 CDS 90179436 90179505 90179436 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90179628 90179692 90179628 ID=MS.gene61160.t1.exon2;Parent=MS.gene61160.t1
chr4.2 CDS 90179628 90179692 90179628 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90179791 90179883 90179791 ID=MS.gene61160.t1.exon3;Parent=MS.gene61160.t1
chr4.2 CDS 90179791 90179883 90179791 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90180033 90180105 90180033 ID=MS.gene61160.t1.exon4;Parent=MS.gene61160.t1
chr4.2 CDS 90180033 90180105 90180033 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90182255 90182587 90182255 ID=MS.gene61160.t1.exon5;Parent=MS.gene61160.t1
chr4.2 CDS 90182255 90182587 90182255 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90182723 90182787 90182723 ID=MS.gene61160.t1.exon6;Parent=MS.gene61160.t1
chr4.2 CDS 90182723 90182787 90182723 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90183281 90183412 90183281 ID=MS.gene61160.t1.exon7;Parent=MS.gene61160.t1
chr4.2 CDS 90183281 90183412 90183281 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90183860 90183901 90183860 ID=MS.gene61160.t1.exon8;Parent=MS.gene61160.t1
chr4.2 CDS 90183860 90183901 90183860 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90184114 90184614 90184114 ID=MS.gene61160.t1.exon9;Parent=MS.gene61160.t1
chr4.2 CDS 90184114 90184614 90184114 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90185196 90185350 90185196 ID=MS.gene61160.t1.exon10;Parent=MS.gene61160.t1
chr4.2 CDS 90185196 90185350 90185196 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90185649 90186111 90185649 ID=MS.gene61160.t1.exon11;Parent=MS.gene61160.t1
chr4.2 CDS 90185649 90186111 90185649 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90186345 90186407 90186345 ID=MS.gene61160.t1.exon12;Parent=MS.gene61160.t1
chr4.2 CDS 90186345 90186407 90186345 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90186502 90186603 90186502 ID=MS.gene61160.t1.exon13;Parent=MS.gene61160.t1
chr4.2 CDS 90186502 90186603 90186502 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90186793 90187110 90186793 ID=MS.gene61160.t1.exon14;Parent=MS.gene61160.t1
chr4.2 CDS 90186793 90187110 90186793 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90187195 90187287 90187195 ID=MS.gene61160.t1.exon15;Parent=MS.gene61160.t1
chr4.2 CDS 90187195 90187287 90187195 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90187396 90187497 90187396 ID=MS.gene61160.t1.exon16;Parent=MS.gene61160.t1
chr4.2 CDS 90187396 90187497 90187396 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90187580 90187684 90187580 ID=MS.gene61160.t1.exon17;Parent=MS.gene61160.t1
chr4.2 CDS 90187580 90187684 90187580 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90188150 90188283 90188150 ID=MS.gene61160.t1.exon18;Parent=MS.gene61160.t1
chr4.2 CDS 90188150 90188283 90188150 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90188390 90188573 90188390 ID=MS.gene61160.t1.exon19;Parent=MS.gene61160.t1
chr4.2 CDS 90188390 90188573 90188390 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90188651 90188782 90188651 ID=MS.gene61160.t1.exon20;Parent=MS.gene61160.t1
chr4.2 CDS 90188651 90188782 90188651 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90189225 90189337 90189225 ID=MS.gene61160.t1.exon21;Parent=MS.gene61160.t1
chr4.2 CDS 90189225 90189337 90189225 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90189427 90189508 90189427 ID=MS.gene61160.t1.exon22;Parent=MS.gene61160.t1
chr4.2 CDS 90189427 90189508 90189427 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
chr4.2 exon 90189886 90191376 90189886 ID=MS.gene61160.t1.exon23;Parent=MS.gene61160.t1
chr4.2 CDS 90189886 90191376 90189886 ID=cds.MS.gene61160.t1;Parent=MS.gene61160.t1
Gene Sequence

>MS.gene61160

ATGGCCCCAAAATCAGGGAAAGGAAAAACAAATAAAGCTAAGACAGAGAAGAAGAAAAAGGAGGAGAAAGGTCACATTCTTTATCTTACTTCAAGAATTTTAAAAACAAACATCATATTTTTATGTCTCTTTTTTTTTTTAATGAAACATGTTTTACTAAATAATTACTTGTTTTAATTTTCATTTTTTCAGCTGTGGCACCTTCTCTTGTAGACATTATTGTGGTAACTCCTTATGATTCACAAATTGTATTGAAGGTACACATTTTTTCTCACATTCATCAAAATTGATTTTTTAAAAATTGGTTTAATTTATTATTAACAATGATTAATAATATTCTTTTTTTGTGCAAAAGGGTATCTCTACTGATAAGATACTTGATGTGAGGAAGCTATTGGCTGTGAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCTCATGAGGTTTGTGTTTTTTAGCTCAATTGAGTATTTTTTTTTTTAATATTTCATCATTCTTTAATTTATTAATAGTTTATTCCTAACTAGCCAAACTAAGTACTTAGCTTTTGATTATTTAATTAATTGGTTTATTCTCTTCCTCCTTAATTAAGGTTAAAGGTCAGAGATTAAATGACAGAGTTGAAGTTGTTACCCTAAAGCCATGTCTACTAAGAATGGTTGAAGGTAGGTGTAGCTAGTATATCTGTTTATTTAACATCAACTACTATTTGTGTCACTCACATATTTGCATGTGCATTTTGTTGAATTTACCATGTGTTGAAATTTTTATGCAATTAGTATAATCTAAGTACTTTATTGTATCTTAGCAAAGTGGGTAATAAACTACTTAGTGATGTTAAGCAAATCTTGCACCTAAAAAAAAATAAGCCATGAAAAGGTCAATTTCAAGTAAAATATATTGACTGCTGTGTATCATATTTTTACATGTAAATTCCATTTTGTGTTCTGTTTTCAAAAGTTTGTATAAAAAAGATGAAAAAATAATAGTTTACTTTTTTACATATAAATATTTGAAAACATAAAATAGAGTAAAAACAAATGGAAATTTTATAATTTAAATAAAACATTTAAATTTTTTCCTTTTTCCTTTTTCCTAATTAAACATACCCATATTTATTTATTTTTTGACAAAAAACATACCCATATTTGTTTATCTACTTTTAGTGCTGATTGAATAACAAACGGGGCATGTATAAATGACATAGTGTGTGGACATGTCTAAGGTGGATGTGACCACTAATGAACCATAACTATAGGCAATATTAACATTAACATTTAAATACATAAGGTTAAATTTTTGATATATTCAATGGTTATTACTATTGGTAATGGTTCATCGATCCCCCATCTACCACGTTCTTTGCTTCATCTACCAATGGAAAAAGTCAAAGAGTTTTACCATTTTTTATATCAAAAAAATAAATATGAACAAGTGTTTTGGAATACTAGTACTCTTTATTTATAGGTTGCAAAATCAATGCTGCCCTTTATTTTTTGCTGAAACATTTGGTATCTTTCAAAGTTGAAGTTGAGTACAATCTAATTTTAGATATTTATTTTTAAAATGTAGTACTAGAATGAATGATATTTTTAGATTTGGAATCTAAGAAAATTCTCTTGTTTCCCTCATTCTCTTGTTAGAAACTTTGTCCAATGTCACTAGTGTCAAAGCCTCTAAATAATTATTGAATCATTCCATGTATTGATTCATAAGATTTGTTTATTCTTATAGTATATATTTGGTGATTTGAATCAACTATTTGGTAAAAATTCATGTGAGTAACTTAACATAAAATATATGGTTAGGAATCGCTCTTTAATGCTTCCCATATTGGAGAAGACAGGTTGCTCCTAAGAAGTCATTAAATTTTTTATGGTAACATAAAAATATCATTTTCGGGGGCCCTTGTAAAACTCTGAAAGCAATGACATTCATTGGTTCAGATGTTTTCAACAAAATCTATTTTTTTTAACAAGTTAAAATAACACAAAAACTATTTGATATACTAAAAAGAAATATTCTATTTATTAGAAATGAAAATGTACTAGCTTTTTCAAACAATTTTTCATATTTTAATTGTTTTAATTTTTTTCTCAGATAAATGTAAAGAATATAGTCATTTTCATTTGCGGTGATATTTGTTTTTGTGTGATGCATTGATTGATTCTATAGATTTTTTGTGTGTCATTTATTCATTCAAGTTGCGTCCTTAGTGGAATACCAAACCCCACCTCTCTGCTTCCAATAAATCTCCATCACATGTTTATATATTCAATAATAAATAATTTAACTTATGTTTGGAGCGGGATTTTGAAAGAAAAAGTTATAGAAATCTTTCTAAAAATAAAAAAAAAATGTAATAAAATATTTGTAATATTATAAAGAAAAAAGTTGTAAAATACTTGAAAAAATAAATTCAATGGATTCAAATATTCTAGAATCTTTTTTGTTGATCAAATTTATCTACTAGAAAAAAATCATAAGTTCAACTTACCTGAGCTAAAGCTTGAAGAATAAAATTATACTAAAATGTAAGTTTGACCCTTCAAAATCCTCCAAAACTCTCGCTCTAAATATATAATTGTATTATTATTATTTTTATTCATATTTACAAATACCTTACTCAACATATCAAATATCTCTACAACTTTCCTAATGTAAGTTGTATTTACGGACTACATCATGCATGCATTTTTATTAAGAGCTAATCATTTTTTTAATAGATTATTAAGAGTTTAATTGGTATATATTGTTGATGTATCCATTTTTACCCTGAAAATAAATATTATTTTATATTTTTTATTTTTACAGAGAATTACAATGAAGAATCTCAAGCAACTACACACGTGCGAAGGTTATTGGACATTATAGCCTGCACAACAAAATTCGGAAAGCCCAAACGCAACATAGCAGGCCCAGACTCATCAAAGCCCAAGAAAAACGGAAAAGCCCATAATCAAAACAAGAGCGGTTTGAGCCCACCCGTAACACCGAATGGAGAAACCCGGGTCGGGTCACCAATGTCGGAGCCGCCGGCGTCGCCGATATCGGAGAATGTGGGAATGGTGGCGATTCATCCGACGCCGAAGTTGTCGGATTTTTATGAGTTCTTTTCATTTTCGAATCTCACTCCTCCGATTTTGCGTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAATTTTTATGCGTTTTTGCTAGGGTTGAAAATTTGGCATGGTGATAAGGGTATTTATGTCTTTTTATATGCAGATTTGAAGAAATGTGAACTGAAGGAAGAAGATGATAGAGGCAAAGGAGATTACTTTCAGCTTCAGGTTTTGCTAATTTTTCTTTTTTGTTCCTTATTTGTTTTGTTACTTAGGGCTTCTTTGAATTTGAATTGTTAGTTTCAGTTTATATAATACTATGAAATACGGACACGGACACGGGACACTGTGACACACCGACACACTTAATAATTTGATAAAATCACATAATTTACTGCAAATATATGTGTTGCGACACCTGTCTGATATCGGGACACACCTAATTCGAGGAGTGTCCGTGCTTTATAGATGTAATTTGATATGACCAAATGCTTGTGAGCTTATAAGCTATAAGCTCAAAAAATGTGACTTGCTAAACAAACCCTTTGTGTGGCAAGACAAAAATGCTAGTTTATAGTGTATAAGCTCGTATAATTGTCGTTCTTTCACGAGCATATATATCACATTGTATTAAAAAAAAAAATGTATTACCCTGTAATATTGTTGTTGTTGCATGTGTCTGATTTAAAGCTGAAAGTGTAAATGTTGTTGGTGCATGAAGGTTAAAATCAGCAATGGGAAAGTAATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTACAGTGTTGGAAAGCTGTCTCTACAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAATGTAAGTTTCTATTTATGTACATATTTGTTTGATTGTCTGGTTATTTTCTCAACCTGCACCAAACCTCTTGGTAAATACTAAATGTTTGGTCATTATTATTTTTTGTTGTATATTGTCTTTAAATAATATAATAGTCATTTAATTTGTTAAAAAAAATTCTTATATACTCTTCAAAGAAATTTATTTTGATTTTAGTAAATTAGTTTGTTAGTTTATTCTAACGATTCATAGCTTCCAACTTTGTAGAAATATCTGCACACACATTTCCTTGGTATTAAATAATGATAACTAATGAATAATAAATTTTTCGGTAAAACATGCCAACTTAGTGATATTCATGAATCATGACGTTATACACGGGCCAGATTCTAAATGATTTCCTACTGAATGGCTAGCTATACTTTCATGTGTTTTCTGCTGACTCTAACAAATGACTGATCAATGCAGGCTTATGGATCATTGATGAAAGCTTTTGCGGATCGTAACAAGGTTAGCTTTACATTAAATGAAATTGGTCTTGGTTTTTTTTGAGAAAAAGAGTTCGATAACTTAATGATTGTGCAAACAAGTTTTACGCAGACATTCGTTAATATTACACTGATGCAAGATAATGAAATATGGTTGGACATTATTGTAAATTTTACTCTGTAAAGTCTTTAAACTCAGATTGTGTTTTATTAAATAATTGCATAATTCTCCAGTTTGGCAATCTTCCATATGGACTCCGATCGAATACATGGCTAGTTGCTCCATCCGTTGGTGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGATGAAAACTGGGGTGGCAATGGTGGTGGCCAGGGAAGAAATGGAGAATATGAACGTCGACCATGGGCAACAGATTTTGAAATTTTGGCTTCTCTTCCTTCCAAAACTGAGGAGGAGAGGGTGATCAGAGACCGAAAAGCTTTTCTACTTCATAATCAGTTTGTTGATACATCGATATTTAAGGCTGTTGCAGCTATACAGCATGTGATGGAGTCCAAGTCTAGTCTGAATTCTTCTCCGGGTTCTGTTATGCATCGAGATCAAGTGGGAGACTTATCCATTGTAGTTGTACGTGGTGGAAATGGAAAGTTTGATTCTACACTGAATGAATCGAGTAAGCATAATGACGATGTTCAGAAGAATTTAATCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGTAAGTAATGTATACTCCCATTTTTCGAGGTTATAGATGTATATGCTTATGTACTTTTTGAGATCGATCAAATGTCACTCGTCTAATTTCATCTCTGTTTTTTATTTTACCAAAAATCACATTGATGATTGATTACCATTCTACTTCATATTTTACTGATAGCATCTCCAAAATACCCCTCATTTAATTTAACTTTATGTATTTTCAATGAATCAATTTATTTGTCATGAAGGGTAATTTATTTGTCATGAAGGGTAATTTAGCCAATAGATTGAATGTTAAATGAATCAATTTATTTGTCATGAAGGGTAATTTAGCCAATAGATTAAATGTGATCAACTACTTTTCTTAATACGCGTAATTTGGTCTAATTTTGCTTATACTTCACTCCTAAAAAACTCTTCATCCTTCCATGTGATTTTGTTGTCTTTGTATTTCATGATACATACATGATTCTATCTACTCTTAGTTCATTGAAATTCTAAAATTAGTGATGAATTGGTTTTGAACTTGGGTGGTTAGAATATTTCTATATGAAAGATACTAAGATGAGGTTTTTTTTTTGGCATTTTTTATGACAGGACACTTCTTCCTTGGCCGTAGTTGTTGTTCACCACTGTGGATATACAGCTACAGTGAAGGCTGTTGGTAATGCGAATGCAAGGAAACCTAAAGTTCAGGATATCGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAATAGGTTTGAACATTAAGCTATTCTAAGATTGCATATCAATTCTGGTTAAACATTTGGATTTAATTGGTATTCACTGTCGATGTGAAGAGTTTTACAATGTCATTCGATTGTAATCATTGGATCGTTAAATATCTCAGTTTACTTAAATGACCATTTTTAAAGTCACAGATACGATAGGTTGTGATTGATTGATAGTGACAAAAGTGTTACACTAACAGTGCATTAAAATTAAACTCAAATCATTTTATTAACAATAAAAAAGTTATGGTGAGGCTTACAACACTTTTTATGATGTTTGTAGTTTGAGGGCACTGCTTCACAAATCTGGAGCTGATTCATCAGAAGGGACTTTGACGTCCTTGTCAAATTTTGATGACTTGGATGCTTCTAAAGATCTTGTTAGGAAGGTGGTTGAGGAATCCATCGAAAAGATAAAGGAAGAGCCAAGTGTTTCAAAACGGTCGATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCAACCGATGGCAGTTCCAATAACAAGGATGGAAGTAATGTCGAGCCAGCCGTGAAAGGTCTTGGAAAGCAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACATAAATTGTGCAGAGGAGCAAAATAACGATGAGCCAAATAACGATGAACCAAGTAGTTTGAATGAATTAGAGAAACTACTTTCTCCAGAAGCCTTTTTGCGTCTCAAAGAATCTGGATCTGGTCTTCATATGAAGGTTTGTGGTATACTTTGTAGATTGTGATACTTTATTTTAGGTGTATTTTCTTGTTGTCATTTGTTTTACTTGAAAATATGTATGTCACTTCTCTTGTAATTATGCTAATTCTCTTTTTTTTATTTTTTTTTATTTTCTTATTTATCGTACATTGTAAATTTGCTATGTTGATGTTTATGATGTGTTTTTTATATTTTTATATCTGATTTTCAATTTGTATCTTCCTGCAACAGACGGTGGATGAGCTTATCAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTAATGTTACATTATTCAATGGACTCTACATTCCTTAAATAACTTGAATGTTGTTTCCATGGATTAAGAACTGAGGAGTGTGTTACTTTTTTAGGTTACGGACTTTGGATCACTTGAACTTTCTCCTGTTGATGGTCGTACACTTACTGATTTCATGCATTTAAGAGGACTAAAGATGGGATCTTTGGGTGAAGTGGTGAGAATTTTTCTCTTCATCCTTGGTTATAGAAAAAGTATATTTTGAATGAATGTTAAAATGTTTTAAGCTATAGTTTCAAATTTACTTTTGTAAACTAAATACCGTGTCTAGTTATACTAACTAGTTTTTGTAATTTAACATTTGTTTTTTTTTTTTTTTTTGGTTCTAATCTCATGTATGAATCAGGTTAAACTTTCAGAGAATCTTCCACACATACAATCACTTTGTATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAGTCATTGCTTCTGTAGACAATGCAGCAGATTTACCTTCAGTCATTGCCTCGACACTGAATTTTTTTCTTGGAGGGTGTCAAACTGAAGATACAGACCAAACTTTGGGTGATGATTATCATCTCAAAATTCATTGGTTACGTATGTTTTTGTCAAAAAGATTTGGATGGACATTAAAAGATGAATTTCAACATTTGAGAAAGTTATCTATTCTTAGAGGGCTCTGTCACAAGGTATCAGTTGGTTCTCTTGATCACTTATTATATCTTTTTACACGACTCTTTTATTGATTTCAGATGTTATTTTGTTTTCTTCAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCCCCTAAGCCCTTTGGAAAGTATGATATTATCAGCCTTGTTCCCGTTTGCAAGGTGTGATTTTGTTTATGTATCAGTCACAAGTCCATTTTAAGAATAATTCATTAATTATGATCTCATTATACAACATATTTACCAACAAGATCATATTTTACTTTACAGCATGTGGGATGCTCCTCAATAGATGGACGCAATTTATTGGAATCATCGAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTTAGTTATGGAACAAAGGTAATCATCAATTCCTTGGAACGAACCATTTAGTGTTTTTTATAAACATGGCACATAGTTTGACATTACTATCATATTACAGGCATTAGCAAAGATGATGACTGTTTGTGGTCCATATCATCGAAATACTGCAAGTGCGTATAGTCTTCTTGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGTAAATTACACTTGTCAGATTTTAGTCCCAGATACTATAGAATTCTGATATTTATGGTTTAATTTTTCCTGATACTAGTTTTAGACTAGCAATGATAGAAACAGAGTTTTTTTAGACTAGCGATGATAGAAACAGAGTTTTTTTCTTAAGCTGCCAAGTTATAAGGGAAAAAAGAGGTAAGAAAGGATAAAGGAAAAAATATGTTGTACCTATATATGGTCCTGTATGTGTATGTTTGGTGGATCCAATGTTGTCAATAACGGATCACAGAAATAGCTATTTGTTCAAATTCTGCTACAATACAGTCCTATAGCACTGGTATAACCACTATTTGACAAAACTTTGTACTTGCACCATTATAGCAGCTACTTGAAAATACCGGGTGGACCTGTGCCAATTTTATGTAGAAAATAACTGAAGGTTTAGTATTTATATTTAATCTTCATTATACTGTCTTTTATTCAGGCCACCATTTATCAGCAAAAGGCGTTGGATATAAATGAGAGGGAGCTTGGACTTGACCATCCTGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTACCGTCTGCAACATATTGAGCTGGCTCTGAAGTAAGTAAAGCTTTGCTGAATTGGATTAGTTGTTTGTTTCATGAATTTCTGTTCATTATTATGAAACTTACCATGTTCTCATTAAACTTAATGCATATTTTGATAGGTACGTTAATCGCGCTCTCTTCCTCCTACATTTCACATGCGGTCTGTCTCATCCAAATACAGCTGCTACATATATAAATGTTGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTGGCACTTCGGTACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGCAGATCATATACAGGTCTCTCTATCTTTCATTTATTTAACTTTGTTTCCCACTGGAGAACATTGTTTTATAATGTATTTTTCATCTTATAGACTGCTGCAAGCTATCATGCCATAGCCATAGCACTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAGGCGAAGCTTGGCACAGAAGATCTTCGAACTCAGGTCATTTCCCTTTCTTCTATTATTAGCAGTGAATCTCAAAGATTATGCAGTTAGATACTATTAGATTGTAAGATGTATTATAATATTTTTGATATCTTTGATATTATATTAGAGTATCTTAGTTTATTTCCTAGGATCAGTTTATATAAGCTTAGAGTATCTCTTAGGATTAGTTTTTTTTCTTGTTATGATTTATTACCTGATTTCCGTATTTATTTAGGATTGAGTCTATCTATGTATTCCTTTTAAATTGGGATTAATGTTTAGCCTTTTGTATTAAGTCAACATCAAGCTGTTATCGATAAAATTTGAGCTTTTATTTTTTATCTCCTCTGTAAACCTCACAACTTCATCATATACTCTAATTGCCATAATATAGAATTAGTAAATAATATTGGATAGTGTTAACAATTTTTTAAATTTGGAAATTTCGCCAATGCAGGACGCGGCTGCATGGCTAGAATATTTTGAATCAAAAGCTATAGAGCAGCAAGAAGCAGCAAAAAATGGAACTCCAAAGACAGACACATCCATTGCAAGTAAAGGTCACCTTAGGTACTGACCTTGAATCCCTTTATTATTGTTTTCCAAATAAATAGGTTATATTATTTGCTACAAAAATATGTGAATATGTTTTCATGTAGTGTGTCAGATCTCCTGGATTTTATTAGTCCTGACAACGATTCAAAGGGAAATGATGCTCAACGGAAACAAAGGCGTCCAAAGGTGAGGAAATATATATTTTTTCATGTTTATTTATTCTTAACATAAAATCTACTTGGATTTTCCCTTTGAGGGCATGCTTGTAAACTTGGGATTCATTTCAGTTTTGATCATATTTATACTATATTCTGATGGCATGCTAAGGTAACACATGCTTTGTTCTTTAATAAATACTTGTATAAGGTAAACAAGGAAGACTATGTTACAAAGATTGGGAGTTTTTACATTTATTAAAGTCAACTGTGAAGGACATTCAACCTATTACATTCTTTTTTGGAGTTAGCTTATATTTCTAGGTGAAGCTCTGAGAGTTTGATAAGTTTCAAATCAAAACTAATTCTGAAAACCTTTTATGTCACTTTTATATGTGATTTTTTCAGATACTTCCAGTAAGTGATAACAACTCTCAAGAACACGATGATGCTGCAATAGTTGATGATGTCGTTATTGTTGACAATGCAAAAGATGCCACAAAAGCAGTAGAAGGCAAAATAGAAGAAACAAAAGCCAAACATGGAACCGAAGAACCAAAAAAAATTGTTGATCTCAGCATGCACAAGCCAGTGGTGACAGTTGAAGCTGTTTATGAGACATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGTTCAGGTAACGCTGCTAATCGCAAGTCTGGACGCAGACAACGGCCTCTTCTATCAAAGCTCACTGTTAATGGTTCTGATAATCACATGTACAAGGAAGCCAGTTACAGGAATGACACAACCCTGCACCAAAAAGCAGCTCCAAAAGTAGCTTCAGCTATGTTATCTCCATCTAGAAAATCAAAAACACCAAAAGCTTTGTCATCTAAAATTTCATCAACTCCAGCATCATTGAGTTCTTTGGCCTCAAAGTCTATATCTTACAAAGAAGTCGCTGCTGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAAAAAACCGAGACAGAAAAGGTAAATGATGAAAATGAGATGCCGAAAAATGAAGGTTCTATCGAAACTTCTAATGCTGATACAGTTCCACAAAAAGATGAAAAAGAACCTTCTGATGCTGATACAGATCCACAACAAGATGAATCTGAACAAGATAACTCTTCATCAGAACTTGAGAAGGTTTCCCCTTCATCTGATCAAGCAAAATCTTCCGAAACAAATGGAAGCAAGCTTTCTGCTGCAGCCAAACCTTTCAGCCCAGGAACGTTGTCCGCGTCTCGCCATTTAAGTCCAGTTCCTCTCGCGAGCATATATGATGCAAATGGGAGTCAAGGCATTCTTGTAGAGCCTGTTCTTCCTCCTGCTGCTGCCAGGGTCCCTTGTGGCCCTAGATCACCGTTGTATTACAGAACCAATTATACATTCCGCATGAAACACAGTTCGACCAAAATAAGGGAAATGAGTGGATCAGGTGGTCCGAAAATTATGAATCCACATGCTCCTGAGTTTGTTCCAAGAAGTGCTTCTCAAGTAGAAAATGGTGAAAAGAACAGTGCCTCCAAAAACTGTCTTTCTGAATCCGAGAAGTCAGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAGTCTGTTCATCAAAATGCTGATGCTGTGGATGAGCCTAAAGTTAGTGAAGGAAAAGTTGAGAACTTTGAAAACTCTTCTGATGAAGTAGCTAAAGACAGCGCTGTCATAAAAATAATGTACGGTACTGAGGAAAAGAATAAGACAGTAGTTAATTCCAGCGATGACAGTGAAGAGCAGGACAATTTAGATGGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAGCAGGCAAAAAACCACAAATGGAGTCGCTGAATTGTACAACCAGCCGTCAATTTGTGCTTCGGTTCGTTGA
Protein sequence

>MS.gene61160.t1

MAPKSGKGKTNKAKTEKKKKEEKAVAPSLVDIIVVTPYDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCLLRMVEENYNEESQATTHVRRLLDIIACTTKFGKPKRNIAGPDSSKPKKNGKAHNQNKSGLSPPVTPNGETRVGSPMSEPPASPISENVGMVAIHPTPKLSDFYEFFSFSNLTPPILHLKKCELKEEDDRGKGDYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFADRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPAEDENWGGNGGGQGRNGEYERRPWATDFEILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVMESKSSLNSSPGSVMHRDQVGDLSIVVVRGGNGKFDSTLNESSKHNDDVQKNLIKGLSADESVTVNDTSSLAVVVVHHCGYTATVKAVGNANARKPKVQDIEIDDQPEGGANALNINSLRALLHKSGADSSEGTLTSLSNFDDLDASKDLVRKVVEESIEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDGSSNNKDGSNVEPAVKGLGKQFKLLKKREKKPSDINCAEEQNNDEPNNDEPSSLNELEKLLSPEAFLRLKESGSGLHMKTVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLSENLPHIQSLCIHEMITRAFKHLLKAVIASVDNAADLPSVIASTLNFFLGGCQTEDTDQTLGDDYHLKIHWLRMFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGTEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPVSDNNSQEHDDAAIVDDVVIVDNAKDATKAVEGKIEETKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGWQEANSKGRSGNAANRKSGRRQRPLLSKLTVNGSDNHMYKEASYRNDTTLHQKAAPKVASAMLSPSRKSKTPKALSSKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKTETEKVNDENEMPKNEGSIETSNADTVPQKDEKEPSDADTDPQQDESEQDNSSSELEKVSPSSDQAKSSETNGSKLSAAAKPFSPGTLSASRHLSPVPLASIYDANGSQGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHSSTKIREMSGSGGPKIMNPHAPEFVPRSASQVENGEKNSASKNCLSESEKSEIARQILLSFLVKSVHQNADAVDEPKVSEGKVENFENSSDEVAKDSAVIKIMYGTEEKNKTVVNSSDDSEEQDNLDGEGFVVVTNRRKSRQKTTNGVAELYNQPSICASVR