AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69695


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69695.t1 MTR_8g064490 96.854 445 14 0 1 445 5 449 0.0 897
MS.gene69695.t1 MTR_5g079860 36.571 350 203 10 77 417 41 380 5.06e-55 189
MS.gene69695.t1 MTR_5g005050 33.889 360 195 10 88 417 11 357 8.31e-51 176
MS.gene69695.t1 MTR_5g005050 31.389 360 169 13 88 417 11 322 7.95e-36 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69695.t1 AT1G60230 74.430 395 93 1 47 441 71 457 0.0 629
MS.gene69695.t1 AT3G19630 36.512 367 191 13 87 424 10 363 1.24e-59 199
MS.gene69695.t1 AT2G39670 34.473 351 205 10 80 417 63 401 1.94e-46 166
MS.gene69695.t1 AT2G39670 34.181 354 205 10 80 417 63 404 6.15e-46 165

Find 0 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAATATAAGTTTAG+AGG + 56875:6255-6274 MS.gene69695:intron 10.0%
!!! TAATTATGAATTTTAAACTT+TGG + 56875:2509-2528 MS.gene69695:intron 10.0%
!! AAAATGTGTTGAATAATAAA+AGG - 56875:5351-5370 None:intergenic 15.0%
!! AAATGTGTTGAATAATAAAA+GGG - 56875:5350-5369 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - 56875:1773-1792 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + 56875:1772-1791 MS.gene69695:intron 15.0%
!! ACTTATTTAATTGATAAACT+TGG + 56875:3377-3396 MS.gene69695:intron 15.0%
!! AGAATCAAGATAAAATAAAA+GGG - 56875:6073-6092 None:intergenic 15.0%
!! TTATAGGTATTATGTATATA+TGG - 56875:4357-4376 None:intergenic 15.0%
!!! ATTTGAATGATGTTATATTT+TGG + 56875:1544-1563 MS.gene69695:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - 56875:1647-1666 None:intergenic 15.0%
!!! CGTTAAATTATTTTTGTATA+AGG + 56875:924-943 MS.gene69695:intron 15.0%
!!! TATACATAAAAGAGTATTTT+AGG - 56875:1427-1446 None:intergenic 15.0%
!!! TTTGAATGATGTTATATTTT+GGG + 56875:1545-1564 MS.gene69695:intron 15.0%
!! AAACTAACCAATAGTTAATA+AGG + 56875:1763-1782 MS.gene69695:intron 20.0%
!! AAATAAAGAAGTTAGAGATA+GGG + 56875:6183-6202 MS.gene69695:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - 56875:1806-1825 None:intergenic 20.0%
!! AATTCCTCAATTTAAACATA+AGG - 56875:5495-5514 None:intergenic 20.0%
!! AATTTCTATAGACATGAATT+AGG - 56875:1955-1974 None:intergenic 20.0%
!! ACAATTTATTAAGCCTTAAT+CGG - 56875:3480-3499 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - 56875:1687-1706 None:intergenic 20.0%
!! AGTTGCTATACATTTATTAT+AGG + 56875:3726-3745 MS.gene69695:intron 20.0%
!! AGTTTATACTTTCGATTTAT+AGG - 56875:4074-4093 None:intergenic 20.0%
!! ATTAAATCTAAATCAGTTGA+AGG - 56875:5003-5022 None:intergenic 20.0%
!! CAGAATCAAGATAAAATAAA+AGG - 56875:6074-6093 None:intergenic 20.0%
!! GACAAGATAAAGATTATTAT+AGG - 56875:4373-4392 None:intergenic 20.0%
!! GTTGCTATACATTTATTATA+GGG + 56875:3727-3746 MS.gene69695:intron 20.0%
!! TTAAATCTAAATCAGTTGAA+GGG - 56875:5002-5021 None:intergenic 20.0%
!! TTTGAAAAAGACATACAATT+GGG + 56875:5917-5936 MS.gene69695:intron 20.0%
!!! AATTTGAAACAAAATAGAGA+AGG - 56875:2698-2717 None:intergenic 20.0%
!!! ACTTGATGACATTTATATTT+TGG + 56875:2776-2795 MS.gene69695:intron 20.0%
!!! ATTTCTTTATTGCTATTTGT+TGG + 56875:3949-3968 MS.gene69695:intron 20.0%
!!! CTTTTATTTTATCTTGATTC+TGG + 56875:6072-6091 MS.gene69695:intron 20.0%
!!! TATAAATCGAAAGTATAAAC+TGG + 56875:4073-4092 MS.gene69695:CDS 20.0%
!!! TTATGTATTGTGTGTTATTA+AGG + 56875:1886-1905 MS.gene69695:intron 20.0%
!!! TTATTTTCAATCTCATAATG+AGG + 56875:5524-5543 MS.gene69695:intron 20.0%
! AAAATAAATCATAACAGCGT+TGG - 56875:5436-5455 None:intergenic 25.0%
! AAACTTATGAAAACAGCTTA+TGG - 56875:1019-1038 None:intergenic 25.0%
! AAATAAATCATAACAGCGTT+GGG - 56875:5435-5454 None:intergenic 25.0%
! AACCTTATATTTGTGTTTGA+AGG - 56875:4132-4151 None:intergenic 25.0%
! AATAAAGAAGTTAGAGATAG+GGG + 56875:6184-6203 MS.gene69695:intron 25.0%
! AATAATGCAAGAATTTGAGT+AGG + 56875:4469-4488 MS.gene69695:intron 25.0%
! AATGGAATTGTTGAAAAAGA+TGG + 56875:4715-4734 MS.gene69695:intron 25.0%
! ACACGTTTAATCTCATATTT+AGG + 56875:2135-2154 MS.gene69695:intron 25.0%
! ACATGCAATAAAAGTAAAGA+CGG - 56875:3075-3094 None:intergenic 25.0%
! ACATTATCAATGTTATGAAG+AGG - 56875:3763-3782 None:intergenic 25.0%
! AGAAAGAATTGCAAACATTA+TGG - 56875:6410-6429 None:intergenic 25.0%
! AGATTAGATTAATCTTGCAA+GGG - 56875:6577-6596 None:intergenic 25.0%
! ATAAAAACTCAACTAGATCT+GGG + 56875:5201-5220 MS.gene69695:intron 25.0%
! ATAATGCAAGAATTTGAGTA+GGG + 56875:4470-4489 MS.gene69695:intron 25.0%
! ATACATTTATTATAGGGCAT+GGG + 56875:3733-3752 MS.gene69695:intron 25.0%
! ATAGCAAAATTGACAATTCA+TGG - 56875:3001-3020 None:intergenic 25.0%
! ATTGCGTAAATGTTGAAAAT+TGG + 56875:4553-4572 MS.gene69695:intron 25.0%
! CTAAAATACTCCAATAAAAG+AGG + 56875:5469-5488 MS.gene69695:intron 25.0%
! CTGTTTATAAGGATGAAAAT+AGG + 56875:3310-3329 MS.gene69695:intron 25.0%
! GAAATAAAGAAGTTAGAGAT+AGG + 56875:6182-6201 MS.gene69695:intron 25.0%
! GATCATTATAGACAGAAAAA+AGG - 56875:3037-3056 None:intergenic 25.0%
! GTAATATACCAATTGAGATA+TGG + 56875:4764-4783 MS.gene69695:intron 25.0%
! GTTTATTAAGAGCTTATTTG+AGG + 56875:4505-4524 MS.gene69695:intron 25.0%
! GTTTGAAAAAGACATACAAT+TGG + 56875:5916-5935 MS.gene69695:intron 25.0%
! TAATGATAAAATTGAACTGC+AGG + 56875:3529-3548 MS.gene69695:intron 25.0%
! TAGTTTCAAAAGCAATACTT+TGG - 56875:1749-1768 None:intergenic 25.0%
! TATACATTTATTATAGGGCA+TGG + 56875:3732-3751 MS.gene69695:intron 25.0%
! TATGTATGGAAACAACATTT+GGG + 56875:2343-2362 MS.gene69695:CDS 25.0%
! TATTATGTTAGGTAAGAAAC+TGG + 56875:4042-4061 MS.gene69695:intron 25.0%
! TCACAAAAAATATTTGTGTC+TGG + 56875:6127-6146 MS.gene69695:intron 25.0%
! TCCATGCAAAATTTACAAAA+AGG + 56875:4316-4335 MS.gene69695:intron 25.0%
! TTATGGTATGAACTACAATA+AGG - 56875:6393-6412 None:intergenic 25.0%
! TTCCTTCAAACACAAATATA+AGG + 56875:4127-4146 MS.gene69695:CDS 25.0%
! TTGCGTAAATGTTGAAAATT+GGG + 56875:4554-4573 MS.gene69695:intron 25.0%
!! AAGAATCTAGAGTACATTTA+AGG - 56875:1997-2016 None:intergenic 25.0%
!! ATTTGAGTATGGATTTTGTA+TGG + 56875:1397-1416 MS.gene69695:intron 25.0%
!! ATTTTCTGAATTACCCTTAT+GGG - 56875:5061-5080 None:intergenic 25.0%
!! TATTTTCTGAATTACCCTTA+TGG - 56875:5062-5081 None:intergenic 25.0%
!! TCAATGTAATTTTGCAGAAT+GGG + 56875:3102-3121 MS.gene69695:intron 25.0%
!! TCCTTTTTGTAAATTTTGCA+TGG - 56875:4320-4339 None:intergenic 25.0%
!! TTCAATGTAATTTTGCAGAA+TGG + 56875:3101-3120 MS.gene69695:intron 25.0%
!! TTTGGTCATTCAAAACTTTT+AGG + 56875:3445-3464 MS.gene69695:intron 25.0%
!!! AATTGTCAATTTTGCTATAC+AGG + 56875:3003-3022 MS.gene69695:CDS 25.0%
!!! ATTGTATAGTTTTACATGTC+AGG + 56875:2064-2083 MS.gene69695:intron 25.0%
!!! CTCTTTTATTGGAGTATTTT+AGG - 56875:5471-5490 None:intergenic 25.0%
!!! TAAGCAATTTTTTATCTCTC+CGG - 56875:5969-5988 None:intergenic 25.0%
!!! TATTGATGTTTGTTTTATGC+AGG + 56875:763-782 MS.gene69695:intron 25.0%
!!! TATTTGTTATTTCTATCTCC+TGG + 56875:2558-2577 MS.gene69695:intron 25.0%
!!! TTGTATAGTTTTACATGTCA+GGG + 56875:2065-2084 MS.gene69695:intron 25.0%
AAAAGATTTAGACCCTGTTT+GGG - 56875:1342-1361 None:intergenic 30.0%
AACCATGATAAAGGAAAAAC+AGG + 56875:5891-5910 MS.gene69695:intron 30.0%
AAGAAAGTCATATGCTTTCA+CGG - 56875:6216-6235 None:intergenic 30.0%
AAGCAAATATATGAACAAGG+GGG + 56875:5997-6016 MS.gene69695:intron 30.0%
AATAAGATGTTTACCCAAAC+AGG + 56875:1326-1345 MS.gene69695:intron 30.0%
AATCAGTAATGTTAATGCAC+TGG + 56875:2470-2489 MS.gene69695:intron 30.0%
ACACTGACATCTATTATGTT+AGG + 56875:4031-4050 MS.gene69695:intron 30.0%
ACCAATGTTGTATTTATGGT+AGG + 56875:3210-3229 MS.gene69695:intron 30.0%
ACCTAAGAATTCAAGATTAG+AGG + 56875:4691-4710 MS.gene69695:intron 30.0%
ACCTACCATAAATACAACAT+TGG - 56875:3214-3233 None:intergenic 30.0%
ACCTCTAATCTTGAATTCTT+AGG - 56875:4695-4714 None:intergenic 30.0%
AGACAAACTACTGTTCTTAA+TGG + 56875:5117-5136 MS.gene69695:intron 30.0%
AGCAAGCAAATATATGAACA+AGG + 56875:5994-6013 MS.gene69695:intron 30.0%
ATAAAGAAGTTAGAGATAGG+GGG + 56875:6185-6204 MS.gene69695:intron 30.0%
ATAAGAGAATGACAAATGAG+TGG + 56875:5746-5765 MS.gene69695:intron 30.0%
ATAAGATGTTTACCCAAACA+GGG + 56875:1327-1346 MS.gene69695:intron 30.0%
ATAAGGTTATGTTTCAGTTG+AGG + 56875:4281-4300 MS.gene69695:intron 30.0%
ATATACCAATTGAGATATGG+AGG + 56875:4767-4786 MS.gene69695:intron 30.0%
ATGTTATGGAAACGTATGTA+TGG + 56875:2329-2348 MS.gene69695:CDS 30.0%
CAAAAATAGGAGTCAAAAAG+TGG - 56875:2251-2270 None:intergenic 30.0%
CAAGCAAATATATGAACAAG+GGG + 56875:5996-6015 MS.gene69695:intron 30.0%
CATAAATACAACATTGGTGA+TGG - 56875:3208-3227 None:intergenic 30.0%
CATCACCAATGTTGTATTTA+TGG + 56875:3206-3225 MS.gene69695:CDS 30.0%
CATTAAAGCTGCAGATATTA+TGG + 56875:3783-3802 MS.gene69695:CDS 30.0%
CTGAAACATAACCTTATCTT+TGG - 56875:4278-4297 None:intergenic 30.0%
CTGGATGATATATTGGTATT+TGG + 56875:6146-6165 MS.gene69695:intron 30.0%
GAAGAAGATTAACACTTGAT+AGG + 56875:4647-4666 MS.gene69695:intron 30.0%
GAATAATAAAAGGGAGTGAA+TGG - 56875:5341-5360 None:intergenic 30.0%
GAATTCAAGATTAGAGGTAA+TGG + 56875:4697-4716 MS.gene69695:intron 30.0%
GACAAACTACTGTTCTTAAT+GGG + 56875:5118-5137 MS.gene69695:intron 30.0%
GAGATTAGATTAATCTTGCA+AGG - 56875:6578-6597 None:intergenic 30.0%
GATAAAAACTCAACTAGATC+TGG + 56875:5200-5219 MS.gene69695:intron 30.0%
GATTAAACACTACTAGATAC+TGG - 56875:2450-2469 None:intergenic 30.0%
GCAAGCAAATATATGAACAA+GGG + 56875:5995-6014 MS.gene69695:intron 30.0%
GTAATATAAATTACTCCCTC+CGG - 56875:5177-5196 None:intergenic 30.0%
GTATGTATGGAAACAACATT+TGG + 56875:2342-2361 MS.gene69695:CDS 30.0%
GTATTAGTAAGCGATATTTG+AGG + 56875:1497-1516 MS.gene69695:intron 30.0%
GTGGTAAGAGAAATAAGAAA+CGG - 56875:599-618 None:intergenic 30.0%
TAAATTGCCTGAACAGTTAT+AGG + 56875:4434-4453 MS.gene69695:intron 30.0%
TAATGCAAGAATTTGAGTAG+GGG + 56875:4471-4490 MS.gene69695:intron 30.0%
TACATTTATTATAGGGCATG+GGG + 56875:3734-3753 MS.gene69695:intron 30.0%
TACTTCCTCCCTAATTAAAA+GGG - 56875:1104-1123 None:intergenic 30.0%
TAGAAATTCATCATCTACTG+AGG + 56875:1967-1986 MS.gene69695:intron 30.0%
TATACCAATTGAGATATGGA+GGG + 56875:4768-4787 MS.gene69695:intron 30.0%
TATCCATTGACCACAAAAAT+AGG - 56875:2264-2283 None:intergenic 30.0%
TATTTCCTATAGAAGTCTTG+AGG + 56875:2106-2125 MS.gene69695:intron 30.0%
TGATGTGTTCAATTTGAGTA+TGG + 56875:1386-1405 MS.gene69695:intron 30.0%
TGCAAACAAGTTATGTTTGT+TGG + 56875:4915-4934 MS.gene69695:intron 30.0%
TGGTAATATATAGTTGGACT+AGG + 56875:4742-4761 MS.gene69695:intron 30.0%
TTACTTCCTCCCTAATTAAA+AGG - 56875:1105-1124 None:intergenic 30.0%
TTCATCCTTATAAACAGAAG+TGG - 56875:3307-3326 None:intergenic 30.0%
TTGATTAGAACATGTACAAG+AGG + 56875:3571-3590 MS.gene69695:intron 30.0%
TTGTCATGTTTCCAAAGATA+AGG + 56875:4264-4283 MS.gene69695:intron 30.0%
TTTCACTTTATTGCTTGAGT+TGG + 56875:4204-4223 MS.gene69695:intron 30.0%
TTTGTGAAGAAGAAATGTTG+TGG - 56875:543-562 None:intergenic 30.0%
TTTGTGTCTGGATGATATAT+TGG + 56875:6139-6158 MS.gene69695:intron 30.0%
! AAAAAACCACTGCGTATTTT+GGG - 56875:6332-6351 None:intergenic 30.0%
! AAAAGCATATTTCGCTGAAA+AGG + 56875:3416-3435 MS.gene69695:intron 30.0%
! AAACATAAGGCCTCTTTTAT+TGG - 56875:5482-5501 None:intergenic 30.0%
! ATATGTTTTGTGAGACTGTT+TGG - 56875:1044-1063 None:intergenic 30.0%
! ATTGCAGATTTTATTCACAC+TGG + 56875:2891-2910 MS.gene69695:intron 30.0%
! ATTTTATTCACACTGGATGA+TGG + 56875:2898-2917 MS.gene69695:CDS 30.0%
! CTTTTGCTTATATATGAGAC+CGG + 56875:5155-5174 MS.gene69695:intron 30.0%
! GTTTTATAAATCCCAGATAG+TGG + 56875:4808-4827 MS.gene69695:intron 30.0%
! TAAAAAACCACTGCGTATTT+TGG - 56875:6333-6352 None:intergenic 30.0%
! TAATAACCCTTTTACTCTCA+TGG + 56875:5027-5046 MS.gene69695:intron 30.0%
! TATGTTTTGTGAGACTGTTT+GGG - 56875:1043-1062 None:intergenic 30.0%
! TGGGTTTTTGTCATCAAAAT+TGG + 56875:4573-4592 MS.gene69695:intron 30.0%
! TTTTATTCACACTGGATGAT+GGG + 56875:2899-2918 MS.gene69695:CDS 30.0%
! TTTTCTCCTTTACATTGCAT+TGG + 56875:3670-3689 MS.gene69695:intron 30.0%
! TTTTGTCATCAAAATTGGAG+TGG + 56875:4578-4597 MS.gene69695:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + 56875:1855-1874 MS.gene69695:intron 30.0%
!! AGGTTTTAGTGAGAGAAAAT+GGG - 56875:574-593 None:intergenic 30.0%
!! CAAACATGCCCTTTTAATTA+GGG + 56875:1093-1112 MS.gene69695:intron 30.0%
!! GTTCAAAAGTGCTTCTTAAA+GGG + 56875:818-837 MS.gene69695:CDS 30.0%
!! TACCTGTTTTTCCTTTATCA+TGG - 56875:5896-5915 None:intergenic 30.0%
!! TTATTTCTATCTCCTGGTTA+AGG + 56875:2564-2583 MS.gene69695:intron 30.0%
!!! CTGTTTTTTGTTTCTTCCTT+CGG + 56875:2169-2188 MS.gene69695:intron 30.0%
!!! CTTTTTGACTCCTATTTTTG+TGG + 56875:2251-2270 MS.gene69695:intron 30.0%
!!! GATGTTATATTTTGGGATGA+AGG + 56875:1552-1571 MS.gene69695:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - 56875:1854-1873 None:intergenic 30.0%
AAACACTGACACATTGACAT+CGG + 56875:1140-1159 MS.gene69695:intron 35.0%
AAGGGTAAAATGGTTGGATT+TGG - 56875:5315-5334 None:intergenic 35.0%
ACAAAAAGGAATGTATGAGC+TGG + 56875:4330-4349 MS.gene69695:intron 35.0%
ACAGTTATAGGAGTTTGAGT+TGG + 56875:4446-4465 MS.gene69695:intron 35.0%
ACATTCCATGTCATAAGACT+TGG + 56875:6446-6465 MS.gene69695:intron 35.0%
ACATTTATTATAGGGCATGG+GGG + 56875:3735-3754 MS.gene69695:intron 35.0%
ACTTGTTCCATGAGAGTAAA+AGG - 56875:5037-5056 None:intergenic 35.0%
AGCATGCTATTGACAAGAAT+GGG + 56875:5678-5697 MS.gene69695:intron 35.0%
AGTGAGAGAAAATGGGATAA+TGG - 56875:567-586 None:intergenic 35.0%
ATAAAATTGAACTGCAGGTG+TGG + 56875:3534-3553 MS.gene69695:intron 35.0%
ATACCAATTGAGATATGGAG+GGG + 56875:4769-4788 MS.gene69695:intron 35.0%
ATATTATGGTGCATGACCAA+GGG + 56875:3797-3816 MS.gene69695:CDS 35.0%
ATCTCATTCAATCCACATAG+TGG + 56875:6593-6612 MS.gene69695:CDS 35.0%
CAAAAAGGAATGTATGAGCT+GGG + 56875:4331-4350 MS.gene69695:intron 35.0%
CAAAAGATTTAGACCCTGTT+TGG - 56875:1343-1362 None:intergenic 35.0%
CAAATCCTCAAGACTTCTAT+AGG - 56875:2114-2133 None:intergenic 35.0%
CAGCTTATGGCATTGTTTAT+AGG - 56875:1006-1025 None:intergenic 35.0%
CATACGTTTCCATAACATCA+TGG - 56875:2327-2346 None:intergenic 35.0%
CTACTCTACAAAGTCATTTG+TGG - 56875:4395-4414 None:intergenic 35.0%
CTATTGACAAGAATGGGAAA+AGG + 56875:5684-5703 MS.gene69695:intron 35.0%
CTCTAGATTCTTGAATGAGT+TGG + 56875:2005-2024 MS.gene69695:intron 35.0%
CTTGTTCCATGAGAGTAAAA+GGG - 56875:5036-5055 None:intergenic 35.0%
GAAGATTAACACTTGATAGG+AGG + 56875:4650-4669 MS.gene69695:intron 35.0%
GAAGGAATTAATGACAGGTT+AGG + 56875:4173-4192 MS.gene69695:intron 35.0%
GGCTGATGGTAATATATAGT+TGG + 56875:4736-4755 MS.gene69695:intron 35.0%
GTTATTAAGGTTAGACAGCT+CGG + 56875:1899-1918 MS.gene69695:intron 35.0%
TAAAGAAGTTAGAGATAGGG+GGG + 56875:6186-6205 MS.gene69695:intron 35.0%
TAATATCGCTCGCAGTTATT+CGG + 56875:5709-5728 MS.gene69695:intron 35.0%
TAGCATGCTATTGACAAGAA+TGG + 56875:5677-5696 MS.gene69695:intron 35.0%
TCAAACTCCTATAACTGTTC+AGG - 56875:4444-4463 None:intergenic 35.0%
TCCATTGAACATGTGGTTTA+GGG + 56875:1922-1941 MS.gene69695:intron 35.0%
TCTTTGTTCAAACCTTAACC+AGG - 56875:2579-2598 None:intergenic 35.0%
TGAATGGATGAAGGGTAAAA+TGG - 56875:5325-5344 None:intergenic 35.0%
TGCTTGAAGGAATTAATGAC+AGG + 56875:4168-4187 MS.gene69695:CDS 35.0%
TGGTCAATGGATACAGAAAT+GGG + 56875:2271-2290 MS.gene69695:intron 35.0%
TGTACCTCAGCAATTCAAAA+TGG + 56875:6778-6797 MS.gene69695:CDS 35.0%
TTCAATCATCCTTTCCTCTT+TGG - 56875:6636-6655 None:intergenic 35.0%
TTGGAAACATGACAAAAGAC+AGG - 56875:4259-4278 None:intergenic 35.0%
TTGGTATTTGGAGAATCGAA+AGG + 56875:6158-6177 MS.gene69695:intron 35.0%
TTGTTGAAAAAGATGGCTGA+TGG + 56875:4722-4741 MS.gene69695:intron 35.0%
TTTCACCACAAAAAGTCAAC+CGG + 56875:5251-5270 MS.gene69695:intron 35.0%
TTTCCTCCAATGCAATGTAA+AGG - 56875:3679-3698 None:intergenic 35.0%
TTTGAATGCAACTACTGATG+AGG + 56875:3918-3937 MS.gene69695:CDS 35.0%
TTTGAGTATGTGATGCTTGA+AGG + 56875:4155-4174 MS.gene69695:CDS 35.0%
! AGATGCCACTTCTGTTTATA+AGG + 56875:3299-3318 MS.gene69695:intron 35.0%
! ATGGTTGGATTTGGATCTTT+TGG - 56875:5306-5325 None:intergenic 35.0%
! CCTAATTAAAAGGGCATGTT+TGG - 56875:1095-1114 None:intergenic 35.0%
! GAGGCCTTATGTTTAAATTG+AGG + 56875:5488-5507 MS.gene69695:intron 35.0%
! GCTTACACAGTCTTTTTACA+TGG - 56875:5809-5828 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - 56875:1724-1743 None:intergenic 35.0%
! GTCTATAATGATCGATTCAG+TGG + 56875:3044-3063 MS.gene69695:intron 35.0%
! TACTAGCGTATATTTGAGAC+CGG - 56875:4892-4911 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - 56875:1720-1739 None:intergenic 35.0%
! TTAAAAGGGCATGTTTGGAT+TGG - 56875:1090-1109 None:intergenic 35.0%
! TTTTGAATTGCTGAGGTACA+CGG - 56875:6778-6797 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - 56875:1621-1640 None:intergenic 35.0%
!! ATACAATTGGGTTCTGAAAG+AGG + 56875:5929-5948 MS.gene69695:intron 35.0%
!! CCAAACATGCCCTTTTAATT+AGG + 56875:1092-1111 MS.gene69695:intron 35.0%
!! GAGGTTTTAGTGAGAGAAAA+TGG - 56875:575-594 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + 56875:952-971 MS.gene69695:intron 35.0%
!! GGTTCAAAAGTGCTTCTTAA+AGG + 56875:817-836 MS.gene69695:CDS 35.0%
!! GTCAATTTTGCTATACAGGA+AGG + 56875:3007-3026 MS.gene69695:CDS 35.0%
!! TAAGGAAAGCCTTTTTCACT+AGG - 56875:6375-6394 None:intergenic 35.0%
!! TCTGAAAGAGGTTTTATCGT+AGG + 56875:5941-5960 MS.gene69695:intron 35.0%
!! TTAGCTTGCGATCAATAAGA+AGG - 56875:3705-3724 None:intergenic 35.0%
!!! ACTCCTATTTTTGTGGTCAA+TGG + 56875:2258-2277 MS.gene69695:intron 35.0%
!!! TGTTTGTTTTATGCAGGAGA+TGG + 56875:769-788 MS.gene69695:intron 35.0%
AAAAGGGAGTGAATGGATGA+AGG - 56875:5334-5353 None:intergenic 40.0%
AAAGGGAGTGAATGGATGAA+GGG - 56875:5333-5352 None:intergenic 40.0%
AAGAAGAAATGTTGTGGAGG+AGG - 56875:537-556 None:intergenic 40.0%
AAGAGAAATAAGAAACGGCG+AGG - 56875:594-613 None:intergenic 40.0%
AAGGAAGAGATGAAGCAGAA+AGG - 56875:637-656 None:intergenic 40.0%
AATCCCCGTCTATAAGAACA+AGG + 56875:5780-5799 MS.gene69695:intron 40.0%
AATCCCCTCCATATCTCAAT+TGG - 56875:4775-4794 None:intergenic 40.0%
AATGAGAGAAGTTGAAGGTG+TGG - 56875:673-692 None:intergenic 40.0%
ACCAGAATGAGAGAAGTTGA+AGG - 56875:678-697 None:intergenic 40.0%
ACCTCAGCAATTCAAAATGG+TGG + 56875:6781-6800 MS.gene69695:CDS 40.0%
ACCTTCAACTTCTCTCATTC+TGG + 56875:674-693 MS.gene69695:CDS 40.0%
ACTAACAGCTAGTGTACAGT+TGG - 56875:3899-3918 None:intergenic 40.0%
AGGCTAATCGAGCTTGTAAA+GGG + 56875:6548-6567 MS.gene69695:CDS 40.0%
ATCATCCTTTCCTCTTTGGT+TGG - 56875:6632-6651 None:intergenic 40.0%
ATGTCATCAAGTAACCTCCA+AGG - 56875:2768-2787 None:intergenic 40.0%
ATTCCGAAATATGCTAGCTG+AGG + 56875:6655-6674 MS.gene69695:CDS 40.0%
ATTGTCATGTGTGCTAGAGA+TGG + 56875:3495-3514 MS.gene69695:intron 40.0%
CAGCAATTCAAAATGGTGGT+TGG + 56875:6785-6804 MS.gene69695:CDS 40.0%
CATATTTCGCTGAAAAGGCT+AGG + 56875:3421-3440 MS.gene69695:intron 40.0%
CATCAAAATTGGAGTGGTGT+AGG + 56875:4584-4603 MS.gene69695:intron 40.0%
CATCCTTGTTCTTATAGACG+GGG - 56875:5786-5805 None:intergenic 40.0%
CATCTTCAACATGAATCCGA+AGG - 56875:2188-2207 None:intergenic 40.0%
CATGGAACAAGTTCCCATAA+GGG + 56875:5045-5064 MS.gene69695:intron 40.0%
CCAAGAGCAATAATAGACAG+AGG + 56875:4001-4020 MS.gene69695:intron 40.0%
CCATTGAACATGTGGTTTAG+GGG + 56875:1923-1942 MS.gene69695:intron 40.0%
CCTCTGTCTATTATTGCTCT+TGG - 56875:4004-4023 None:intergenic 40.0%
CGGTTGTTCACAAGTGAAAT+TGG + 56875:3180-3199 MS.gene69695:CDS 40.0%
CTGAAGAAAGATCCACTATG+TGG - 56875:6608-6627 None:intergenic 40.0%
GAGTGAACATGCAGATTTCA+AGG + 56875:2614-2633 MS.gene69695:CDS 40.0%
GATATTATGGTGCATGACCA+AGG + 56875:3796-3815 MS.gene69695:CDS 40.0%
GCATCCTTGTTCTTATAGAC+GGG - 56875:5787-5806 None:intergenic 40.0%
GGCATCCTTGTTCTTATAGA+CGG - 56875:5788-5807 None:intergenic 40.0%
GTAACACCAACACTTCTGAT+AGG - 56875:1247-1266 None:intergenic 40.0%
GTCCATTGAACATGTGGTTT+AGG + 56875:1921-1940 MS.gene69695:intron 40.0%
GTGAAGAAGAAATGTTGTGG+AGG - 56875:540-559 None:intergenic 40.0%
GTGGTCAATGGATACAGAAA+TGG + 56875:2270-2289 MS.gene69695:intron 40.0%
GTGTACAGTTGGATTCATGA+AGG - 56875:3888-3907 None:intergenic 40.0%
GTTGTCATACCTTGTGATAC+AGG + 56875:2937-2956 MS.gene69695:CDS 40.0%
TAGAGTTTATATGCTCCCTC+CGG + 56875:4870-4889 MS.gene69695:intron 40.0%
TAGGTGTGATAGACCGATTA+AGG + 56875:3464-3483 MS.gene69695:intron 40.0%
TCATGGAACAAGTTCCCATA+AGG + 56875:5044-5063 MS.gene69695:intron 40.0%
TCCTTCATGTATTTGAGCGT+GGG + 56875:2401-2420 MS.gene69695:intron 40.0%
TCCTTTATCATGGTTGCTCT+CGG - 56875:5886-5905 None:intergenic 40.0%
TCTAGTAATACACGCAACCT+TGG + 56875:2748-2767 MS.gene69695:intron 40.0%
TCTCCTTTACATTGCATTGG+AGG + 56875:3673-3692 MS.gene69695:intron 40.0%
TGCTTATATATGAGACCGGA+GGG + 56875:5159-5178 MS.gene69695:intron 40.0%
TGGATGAAGGGTAAAATGGT+TGG - 56875:5321-5340 None:intergenic 40.0%
TTGCTTATATATGAGACCGG+AGG + 56875:5158-5177 MS.gene69695:intron 40.0%
TTGTCATGTGTGCTAGAGAT+GGG + 56875:3496-3515 MS.gene69695:intron 40.0%
TTTCTTCAGACCAACCAAAG+AGG + 56875:6619-6638 MS.gene69695:CDS 40.0%
! ACCACCATTTTGAATTGCTG+AGG - 56875:6785-6804 None:intergenic 40.0%
! AGCATCCAAGTCTTATGACA+TGG - 56875:6454-6473 None:intergenic 40.0%
! AGTTTTACATGTCAGGGTGA+TGG + 56875:2071-2090 MS.gene69695:intron 40.0%
! CAGAAATGGGTTCAATCACA+TGG + 56875:2284-2303 MS.gene69695:intron 40.0%
! GAAGTGGCATCTTATTTGCT+AGG - 56875:3291-3310 None:intergenic 40.0%
! GCTTTTCGTGACTACTTCTA+TGG - 56875:3982-4001 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - 56875:1721-1740 None:intergenic 40.0%
! TGGATTTGTTCATGGCTAGA+TGG + 56875:5274-5293 MS.gene69695:intron 40.0%
!! ACATGCCCTTTTAATTAGGG+AGG + 56875:1096-1115 MS.gene69695:intron 40.0%
!! CAGAAGTGTTGGTGTTACAT+AGG + 56875:1249-1268 MS.gene69695:intron 40.0%
!! GTTAATGCACTGGTTCTTCA+GGG + 56875:2480-2499 MS.gene69695:intron 40.0%
!! TGTTAATGCACTGGTTCTTC+AGG + 56875:2479-2498 MS.gene69695:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + 56875:1859-1878 MS.gene69695:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - 56875:1878-1859 None:intergenic 40.0%
AAGGTCACTGTTTCAACCAG+TGG + 56875:3838-3857 MS.gene69695:CDS 45.0%
AATCACATGGATACAGGCCA+GGG + 56875:2297-2316 MS.gene69695:CDS 45.0%
ACAAGAGCAGTTCAATGCAG+TGG - 56875:5608-5627 None:intergenic 45.0%
ACACCAACACTTCTGATAGG+TGG - 56875:1244-1263 None:intergenic 45.0%
AGCAGCAACAACCACTTGTT+TGG + 56875:5561-5580 MS.gene69695:intron 45.0%
AGGTCACTGTTTCAACCAGT+GGG + 56875:3839-3858 MS.gene69695:CDS 45.0%
AGTAATACACGCAACCTTGG+AGG + 56875:2751-2770 MS.gene69695:intron 45.0%
ATCTGATCATCGCCTCTACT+CGG - 56875:6704-6723 None:intergenic 45.0%
ATGTTGCGCACATTAGGCTT+AGG + 56875:3345-3364 MS.gene69695:intron 45.0%
CACCAACACTTCTGATAGGT+GGG - 56875:1243-1262 None:intergenic 45.0%
CCCCTAAACCACATGTTCAA+TGG - 56875:1926-1945 None:intergenic 45.0%
CTAGCCATGAACAAATCCAC+CGG - 56875:5273-5292 None:intergenic 45.0%
CTCCTTCATGTATTTGAGCG+TGG + 56875:2400-2419 MS.gene69695:intron 45.0%
CTGCCTCAGCTAGCATATTT+CGG - 56875:6661-6680 None:intergenic 45.0%
GAGATGAAGCAGAAAGGAAG+CGG - 56875:631-650 None:intergenic 45.0%
GAGGCTAATCGAGCTTGTAA+AGG + 56875:6547-6566 MS.gene69695:CDS 45.0%
GCAGCAATGAAGATGCAAAG+AGG + 56875:6528-6547 MS.gene69695:intron 45.0%
GCCTTTATGCTCCACTATCT+GGG - 56875:4822-4841 None:intergenic 45.0%
GGAGTGGTGTAGGAACAAAA+AGG + 56875:4594-4613 MS.gene69695:intron 45.0%
GGGTTCAATCACATGGATAC+AGG + 56875:2291-2310 MS.gene69695:CDS 45.0%
GGTCATAGCTGATGAGATAG+AGG - 56875:5587-5606 None:intergenic 45.0%
GTCTCACTCATGCTAATCAG+CGG - 56875:5397-5416 None:intergenic 45.0%
GTGTGTGTTTCCAGTCAAGT+TGG + 56875:2970-2989 MS.gene69695:CDS 45.0%
TCACAATAGCAGTCATCGCT+CGG - 56875:4844-4863 None:intergenic 45.0%
TCAGACCAACCAAAGAGGAA+AGG + 56875:6624-6643 MS.gene69695:CDS 45.0%
TCATACCTTGTGATACAGGC+AGG + 56875:2941-2960 MS.gene69695:CDS 45.0%
TGAGATAGAGGCCAAACAAG+TGG - 56875:5575-5594 None:intergenic 45.0%
TGCTAGCTATAGCAGTGTAG+CGG - 56875:5662-5681 None:intergenic 45.0%
TGGTTGAAACAGTGACCTTG+CGG - 56875:3837-3856 None:intergenic 45.0%
TGTCATGTGTGCTAGAGATG+GGG + 56875:3497-3516 MS.gene69695:intron 45.0%
TGTCCCACATGTGTGGATAT+CGG - 56875:1215-1234 None:intergenic 45.0%
TGTCCGATATCCACACATGT+GGG + 56875:1209-1228 MS.gene69695:intron 45.0%
! AGCGTATATTTGAGACCGGA+GGG - 56875:4888-4907 None:intergenic 45.0%
! AGTGTTGCAGTTTCGAGTAG+AGG + 56875:796-815 MS.gene69695:CDS 45.0%
! ATCTGGGACTTACTAGTGAG+AGG + 56875:5217-5236 MS.gene69695:intron 45.0%
! CATCATACTGACGAGTTGGA+AGG + 56875:2368-2387 MS.gene69695:CDS 45.0%
! TAGCGTATATTTGAGACCGG+AGG - 56875:4889-4908 None:intergenic 45.0%
! TCAACCGGTGGATTTGTTCA+TGG + 56875:5266-5285 MS.gene69695:intron 45.0%
!! AAAGCCTTTTTCACTAGGCG+GGG - 56875:6370-6389 None:intergenic 45.0%
!! AGAGGTTTTATCGTAGGCTC+CGG + 56875:5947-5966 MS.gene69695:intron 45.0%
!! AGCCTGCTCAACTATTTCTG+CGG - 56875:3148-3167 None:intergenic 45.0%
!! ATCCACCGGTTGACTTTTTG+TGG - 56875:5259-5278 None:intergenic 45.0%
!! CTCTGAAACTGGTCTAGAAC+TGG - 56875:6299-6318 None:intergenic 45.0%
!! GAAAGCCTTTTTCACTAGGC+GGG - 56875:6371-6390 None:intergenic 45.0%
!! GGAAAGCCTTTTTCACTAGG+CGG - 56875:6372-6391 None:intergenic 45.0%
!! TCCCAGATAGTGGAGCATAA+AGG + 56875:4818-4837 MS.gene69695:intron 45.0%
!!! AGCAGGCTGTTTTTGCTAGA+CGG + 56875:3160-3179 MS.gene69695:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + 56875:1858-1877 MS.gene69695:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - 56875:1877-1858 None:intergenic 45.0%
!!! GTCCTTTTAAGACCGAGTAG+AGG + 56875:6689-6708 MS.gene69695:CDS 45.0%
ACACTTCTGATAGGTGGGTC+CGG - 56875:1238-1257 None:intergenic 50.0%
AGCCTAATGTGCGCAACATC+AGG - 56875:3344-3363 None:intergenic 50.0%
AGCCTGATGTTGCGCACATT+AGG + 56875:3339-3358 MS.gene69695:intron 50.0%
AGCGTCTGATGGAACTAGGA+AGG + 56875:2662-2681 MS.gene69695:CDS 50.0%
AGCTCGGTCCATTGAACATG+TGG + 56875:1915-1934 MS.gene69695:intron 50.0%
ATGGCTGCATGTGGTCAGTT+AGG + 56875:6722-6741 MS.gene69695:CDS 50.0%
ATGTGTGCTAGAGATGGGGA+GGG + 56875:3501-3520 MS.gene69695:intron 50.0%
CAATCACATGGATACAGGCC+AGG + 56875:2296-2315 MS.gene69695:CDS 50.0%
CACCACAAAAAGTCAACCGG+TGG + 56875:5254-5273 MS.gene69695:intron 50.0%
CATGCTAATCAGCGGTGGAA+GGG - 56875:5389-5408 None:intergenic 50.0%
CATGGCACATCCAACTTGAC+TGG - 56875:2983-3002 None:intergenic 50.0%
CGAAATATGCTAGCTGAGGC+AGG + 56875:6659-6678 MS.gene69695:CDS 50.0%
CGCCTCTACTCGGTCTTAAA+AGG - 56875:6694-6713 None:intergenic 50.0%
GAAATTCACGCAGCGTCTGA+TGG + 56875:2651-2670 MS.gene69695:CDS 50.0%
GAGTAGAGGCGATGATCAGA+TGG + 56875:6703-6722 MS.gene69695:CDS 50.0%
GATGATCAGATGGCTGCATG+TGG + 56875:6713-6732 MS.gene69695:CDS 50.0%
GCCCACGCTCAAATACATGA+AGG - 56875:2405-2424 None:intergenic 50.0%
GCCGAGAGCAACCATGATAA+AGG + 56875:5882-5901 MS.gene69695:intron 50.0%
GCTTCTTGAGACACTTCGTG+AGG + 56875:4100-4119 MS.gene69695:CDS 50.0%
GGCCTTTATGCTCCACTATC+TGG - 56875:4823-4842 None:intergenic 50.0%
GGTTGAAACAGTGACCTTGC+GGG - 56875:3836-3855 None:intergenic 50.0%
GTAGTCCTGCCTGTATCACA+AGG - 56875:2949-2968 None:intergenic 50.0%
GTGTCCGATATCCACACATG+TGG + 56875:1208-1227 MS.gene69695:intron 50.0%
GTTGAAACAGTGACCTTGCG+GGG - 56875:3835-3854 None:intergenic 50.0%
TATCCACACATGTGGGACAC+CGG + 56875:1216-1235 MS.gene69695:intron 50.0%
TCACGACTAGTGTGAGGACA+CGG + 56875:6020-6039 MS.gene69695:intron 50.0%
TCACTCATGCTAATCAGCGG+TGG - 56875:5394-5413 None:intergenic 50.0%
TCATGCTAATCAGCGGTGGA+AGG - 56875:5390-5409 None:intergenic 50.0%
TCGCTGAAAAGGCTAGGCTT+TGG + 56875:3427-3446 MS.gene69695:intron 50.0%
TGAAGGAAACGTCTGAGCTG+CGG - 56875:3871-3890 None:intergenic 50.0%
TGCCGCAGAAATAGTTGAGC+AGG + 56875:3143-3162 MS.gene69695:CDS 50.0%
TTGAAACAGTGACCTTGCGG+GGG - 56875:3834-3853 None:intergenic 50.0%
! GAAGTTGAAGGTGTGGTCAG+CGG - 56875:666-685 None:intergenic 50.0%
! GACCCACCTATCAGAAGTGT+TGG + 56875:1238-1257 MS.gene69695:intron 50.0%
! TGCATGTCCTCTAGCTTCCA+GGG + 56875:5630-5649 MS.gene69695:intron 50.0%
!! ATTCACACTGGATGATGGGC+TGG + 56875:2903-2922 MS.gene69695:CDS 50.0%
ACGCAGCGTCTGATGGAACT+AGG + 56875:2658-2677 MS.gene69695:CDS 55.0%
ACTAGTGTGAGGACACGGTG+AGG + 56875:6025-6044 MS.gene69695:intron 55.0%
AGCGGTGGAAGGGAAGGAAA+AGG - 56875:5379-5398 None:intergenic 55.0%
ATCGGAGCTTGAATGGTGCC+GGG - 56875:6752-6771 None:intergenic 55.0%
CAGGGCAGGCCATGATGTTA+TGG + 56875:2315-2334 MS.gene69695:CDS 55.0%
CAGTCCCCGCCTAGTGAAAA+AGG + 56875:6363-6382 MS.gene69695:intron 55.0%
CATAACATCATGGCCTGCCC+TGG - 56875:2317-2336 None:intergenic 55.0%
CATCGGAGCTTGAATGGTGC+CGG - 56875:6753-6772 None:intergenic 55.0%
CATGTGTGCTAGAGATGGGG+AGG + 56875:3500-3519 MS.gene69695:intron 55.0%
CCAGAGCCCAAAATACGCAG+TGG + 56875:6323-6342 MS.gene69695:intron 55.0%
CTAATCAGCGGTGGAAGGGA+AGG - 56875:5385-5404 None:intergenic 55.0%
GCGCACATTAGGCTTAGGCT+AGG + 56875:3350-3369 MS.gene69695:intron 55.0%
GGCGCATCATACTGACGAGT+TGG + 56875:2364-2383 MS.gene69695:CDS 55.0%
GTGTGGTCAGCGGAGATAGA+AGG - 56875:656-675 None:intergenic 55.0%
TGCTGAGGTACACGGAGCAT+CGG - 56875:6770-6789 None:intergenic 55.0%
TGTGGTCAGTTAGGCAAGCC+CGG + 56875:6731-6750 MS.gene69695:CDS 55.0%
TGTGTGCTAGAGATGGGGAG+GGG + 56875:3502-3521 MS.gene69695:intron 55.0%
! CTGCATGTCCTCTAGCTTCC+AGG + 56875:5629-5648 MS.gene69695:intron 55.0%
! GCATGTCCTCTAGCTTCCAG+GGG + 56875:5631-5650 MS.gene69695:intron 55.0%
!! ACGGAGCATCGGAGCTTGAA+TGG - 56875:6759-6778 None:intergenic 55.0%
!! CCACTGCGTATTTTGGGCTC+TGG - 56875:6326-6345 None:intergenic 55.0%
!! CTTTTTCACTAGGCGGGGAC+TGG - 56875:6365-6384 None:intergenic 55.0%
!! GCTCTGGAGAGCTCTGAAAC+TGG - 56875:6310-6329 None:intergenic 55.0%
ACATGGATACAGGCCAGGGC+AGG + 56875:2301-2320 MS.gene69695:CDS 60.0%
AGAAAGGAAGCGGCGAGAGG+GGG - 56875:621-640 None:intergenic 60.0%
AGCAGAAAGGAAGCGGCGAG+AGG - 56875:624-643 None:intergenic 60.0%
AGGGGGTCACGACTAGTGTG+AGG + 56875:6014-6033 MS.gene69695:intron 60.0%
CAGAAAGGAAGCGGCGAGAG+GGG - 56875:622-641 None:intergenic 60.0%
GCAGAAAGGAAGCGGCGAGA+GGG - 56875:623-642 None:intergenic 60.0%
GCTTCATTTCAGCCCCCGCA+AGG + 56875:3819-3838 MS.gene69695:CDS 60.0%
GGGGGCTGAAATGAAGCCCT+TGG - 56875:3816-3835 None:intergenic 60.0%
GTGCGCAACATCAGGCTGTC+TGG - 56875:3336-3355 None:intergenic 60.0%
GAGCAGCCCCTGGAAGCTAG+AGG - 56875:5640-5659 None:intergenic 65.0%
GAGCTGCGGAACAAGCCCAC+TGG - 56875:3857-3876 None:intergenic 65.0%
GGTCCGGTGTCCCACATGTG+TGG - 56875:1222-1241 None:intergenic 65.0%
AAGGAAGCGGCGAGAGGGGG+TGG - 56875:618-637 None:intergenic 70.0%
! CAGTGTAGCGGAGCAGCCCC+TGG - 56875:5650-5669 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
56875 gene 503 6829 503 ID=MS.gene69695
56875 mRNA 503 6829 503 ID=MS.gene69695.t1;Parent=MS.gene69695
56875 exon 503 695 503 ID=MS.gene69695.t1.exon1;Parent=MS.gene69695.t1
56875 CDS 503 695 503 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 785 861 785 ID=MS.gene69695.t1.exon2;Parent=MS.gene69695.t1
56875 CDS 785 861 785 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 2287 2389 2287 ID=MS.gene69695.t1.exon3;Parent=MS.gene69695.t1
56875 CDS 2287 2389 2287 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 2586 2683 2586 ID=MS.gene69695.t1.exon4;Parent=MS.gene69695.t1
56875 CDS 2586 2683 2586 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 2898 3028 2898 ID=MS.gene69695.t1.exon5;Parent=MS.gene69695.t1
56875 CDS 2898 3028 2898 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 3119 3227 3119 ID=MS.gene69695.t1.exon6;Parent=MS.gene69695.t1
56875 CDS 3119 3227 3119 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 3748 3939 3748 ID=MS.gene69695.t1.exon7;Parent=MS.gene69695.t1
56875 CDS 3748 3939 3748 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 4053 4189 4053 ID=MS.gene69695.t1.exon8;Parent=MS.gene69695.t1
56875 CDS 4053 4189 4053 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
56875 exon 6532 6829 6532 ID=MS.gene69695.t1.exon9;Parent=MS.gene69695.t1
56875 CDS 6532 6829 6532 ID=cds.MS.gene69695.t1;Parent=MS.gene69695.t1
Gene Sequence

>MS.gene69695

ATGAGCATGGCGACGAGCGCATTCGCTAACTCCTCCTCCACAACATTTCTTCTTCACAAAACCATTATCCCATTTTCTCTCACTAAAACCTCGCCGTTTCTTATTTCTCTTACCACCCCCTCTCGCCGCTTCCTTTCTGCTTCATCTCTTCCTTCTATCTCCGCTGACCACACCTTCAACTTCTCTCATTCTGGTCACTATTTTTCAATATTCATCTTTTTTTCATATATATAAGCGTTTTGCTTTTATGTTTTTTGATTTATTGATGTTTGTTTTATGCAGGAGATGGAAATAGTGTTGCAGTTTCGAGTAGAGGTTCAAAAGTGCTTCTTAAAGGGATGACTTACTCTGAACTTGAAGTATGTTTTCTTTTTCATAAGCGTTTTTCTTTAAAGTTATTTCTATAACAAAAGATAAATAACGTTAAATTATTTTTGTATAAGGTATAAGCTGTTTTCATAAGCTATCTTGGAGAACTTATGAAAATGAGCTGAAAACAACCTATAAACAATGCCATAAGCTGTTTTCATAAGTTTGCCCAAACAGTCTCACAAAACATATACAAATAGATAAACTTAAATAAGCCAATCCAAACATGCCCTTTTAATTAGGGAGGAAGTAATAATAATGAACTATTAAACACTGACACATTGACATCGGTAAATATTTTTAAAAAAATGAGTTGATTGAACGTAATCACATGTCGTGTCCGATATCCACACATGTGGGACACCGGACCCACCTATCAGAAGTGTTGGTGTTACATAGGAAATAACTTGTACATAAGCTCTTATCATGATAAGCGCTTGTGCTATAAGATTTAAATAAGATGTTTACCCAAACAGGGTCTAAATCTTTTGTGTAGACAAGTTGATAGTGTATTTGATGTGTTCAATTTGAGTATGGATTTTGTATGGTGTTCCTAAAATACTCTTTTATGTATAGATTATATGTGTTCAACTCTGACTTTTTCGTCTCTAAAGACAAATTAATAGTATTAGTAAGCGATATTTGAGGAAAAACTTATTAATGTATTTAGTAATTTGAATGATGTTATATTTTGGGATGAAGGTATTATTATCAATAAAAAAATTGTGCTAACTTTAATACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAATTTGTTTCAAAATGAGTGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTCAATTTTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTGCTTTTGAAACTAACCAATAGTTAATAAGGATAATTTGGTAAAATAACCATTCTCTTTCTTTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGAGGGAGTATTATGTATTGTGTGTTATTAAGGTTAGACAGCTCGGTCCATTGAACATGTGGTTTAGGGGTTGATACCTAATTCATGTCTATAGAAATTCATCATCTACTGAGGCTGTCCTTAAATGTACTCTAGATTCTTGAATGAGTTGGTAAAAAAATGATGTGTGTGAAAGATGTCATAAAAATATTGTATAGTTTTACATGTCAGGGTGATGGTTATAAATTAGTTATTTCCTATAGAAGTCTTGAGGATTTGAACACGTTTAATCTCATATTTAGGAGTTTAATTCTCTGTTTTTTGTTTCTTCCTTCGGATTCATGTTGAAGATGTCATGAACAGAATAAAATATAAAATTGTGTATATCGATTTCCACTTTTTGACTCCTATTTTTGTGGTCAATGGATACAGAAATGGGTTCAATCACATGGATACAGGCCAGGGCAGGCCATGATGTTATGGAAACGTATGTATGGAAACAACATTTGGGCGCATCATACTGACGAGTTGGAAGGTAATTTCTTCTCCTTCATGTATTTGAGCGTGGGCAAAAGATATTGCTTTTTTAATACCAGTATCTAGTAGTGTTTAATCAATCAGTAATGTTAATGCACTGGTTCTTCAGGGAACAGTTAATTATGAATTTTAAACTTTGGAATTTGAATTGACACTCATGTAATTTTATTTGTTATTTCTATCTCCTGGTTAAGGTTTGAACAAAGATTTCAAGCAGATGTTGAGTGAACATGCAGATTTCAAGGCACTTGCTGTAAAAGAAATTCACGCAGCGTCTGATGGAACTAGGAAGGTTGAAATTATCCTTCTCTATTTTGTTTCAAATTCTTATGATACACTTTGCATCTATTAGTTCATCTAGTAATACACGCAACCTTGGAGGTTACTTGATGACATTTATATTTTGGTTTTAGCTTCAAGATTACTTGCATTTCTTGCTTATATTTTTTTAATTTCGTTTCTAGAAAGTCTTTTTGTTGACTGTTTAAACTCACAGAATATTGCAGATTTTATTCACACTGGATGATGGGCTGGTCATAGAAACAGTTGTCATACCTTGTGATACAGGCAGGACTACTGTGTGTGTTTCCAGTCAAGTTGGATGTGCCATGAATTGTCAATTTTGCTATACAGGAAGGCAAGCCTTTTTTCTGTCTATAATGATCGATTCAGTGGCTACACCGTCTTTACTTTTATTGCATGTTTTTCATTCAATGTAATTTTGCAGAATGGGTCTCAAGAGACATCTTACTGCCGCAGAAATAGTTGAGCAGGCTGTTTTTGCTAGACGGTTGTTCACAAGTGAAATTGGTTCCATCACCAATGTTGTATTTATGGTAGGTCAACAATTGCACTCAAAATTCTCAAGCTTACTGTATATCAAGTTCTACTTTATTCCTAGCAAATAAGATGCCACTTCTGTTTATAAGGATGAAAATAGGCCAGACAGCCTGATGTTGCGCACATTAGGCTTAGGCTAGGAGAAACTTATTTAATTGATAAACTTGGTTAAGAATAATTCTTCAAAAGCATATTTCGCTGAAAAGGCTAGGCTTTGGTCATTCAAAACTTTTAGGTGTGATAGACCGATTAAGGCTTAATAAATTGTCATGTGTGCTAGAGATGGGGAGGGGAAGATAATGATAAAATTGAACTGCAGGTGTGGTGTTTTATTGAATGTTGATTAGAACATGTACAAGAGGATTTTCATAATTTTATTGTATATTATATATGTGTACGTATTTTATTGTAGATATAAACAATAGATATAATCAACACTTTTCTCCTTTACATTGCATTGGAGGAAAATTCCTTCTTATTGATCGCAAGCTAATAGTTGCTATACATTTATTATAGGGCATGGGGGAACCTCTTCATAACATTGATAATGTCATTAAAGCTGCAGATATTATGGTGCATGACCAAGGGCTTCATTTCAGCCCCCGCAAGGTCACTGTTTCAACCAGTGGGCTTGTTCCGCAGCTCAGACGTTTCCTTCATGAATCCAACTGTACACTAGCTGTTAGTTTGAATGCAACTACTGATGAGGTAAAAATTATTTCTTTATTGCTATTTGTTGGTAGAGATCCATAGAAGTAGTCACGAAAAGCCAAGAGCAATAATAGACAGAGGATTGATCACACTGACATCTATTATGTTAGGTAAGAAACTGGATCATGCCTATAAATCGAAAGTATAAACTGGACTTGCTTCTTGAGACACTTCGTGAGGAGCTTTCCTTCAAACACAAATATAAGGTTCTATTTGAGTATGTGATGCTTGAAGGAATTAATGACAGGTTAGGAAAACTTCTTTCACTTTATTGCTTGAGTTGGAATTTGCATAAATGATTTTACAGTTTTTTCCTGTCTTTTGTCATGTTTCCAAAGATAAGGTTATGTTTCAGTTGAGGACTGCATACTTTTCCATGCAAAATTTACAAAAAGGAATGTATGAGCTGGGCCATATATACATAATACCTATAATAATCTTTATCTTGTCCACAAATGACTTTGTAGAGTAGCAAAGTGTCATTATGTGCATAAATTGCCTGAACAGTTATAGGAGTTTGAGTTGGAATAATGCAAGAATTTGAGTAGGGGATGTTTGCAGAGTTTATTAAGAGCTTATTTGAGGTATTGAACTTATCTCATGACAAACAATTGCGTAAATGTTGAAAATTGGGTTTTTGTCATCAAAATTGGAGTGGTGTAGGAACAAAAAGGTGTAAGAGTTGTTTGCGCAAACTACTTAATGAAGAAGATTAACACTTGATAGGAGGATTAAATTTGTACTTTCTACCTAAGAATTCAAGATTAGAGGTAATGGAATTGTTGAAAAAGATGGCTGATGGTAATATATAGTTGGACTAGGTAATATACCAATTGAGATATGGAGGGGATTGCAAGAAAAAGCAGTTTTATAAATCCCAGATAGTGGAGCATAAAGGCCGAGCGATGACTGCTATTGTGAAACTTTTAGAGTTTATATGCTCCCTCCGGTCTCAAATATACGCTAGTAAGCTGCAAACAAGTTATGTTTGTTGGTCTTAAATATAAGCAAAATTTATCTACTTCTATCATATTTAATGTTATTATTCTCTAATTACCCTTCAACTGATTTAGATTTAATTTTGTAATAACCCTTTTACTCTCATGGAACAAGTTCCCATAAGGGTAATTCAGAAAATACGATTACATGTTTATTACTTTTAGAATAAAAAATGAGACAAACTACTGTTCTTAATGGGTGTGAAAGTAGTTACTTTTGCTTATATATGAGACCGGAGGGAGTAATTTATATTACATAGATAAAAACTCAACTAGATCTGGGACTTACTAGTGAGAGGATGAAACATGTTTTCACCACAAAAAGTCAACCGGTGGATTTGTTCATGGCTAGATGGACACTGCCAAAAGATCCAAATCCAACCATTTTACCCTTCATCCATTCACTCCCTTTTATTATTCAACACATTTTCTTCTCCTTTTCCTTCCCTTCCACCGCTGATTAGCATGAGTGAGACAGTGAGAGTATTAGTCCCAACGCTGTTATGATTTATTTTAGTTTCAAAATACCTAAAATACTCCAATAAAAGAGGCCTTATGTTTAAATTGAGGAATTTTTTTATTTTTATTTTCAATCTCATAATGAGGTATTGCACTGTATTAGCAGCAACAACCACTTGTTTGGCCTCTATCTCATCAGCTATGACCACTGCATTGAACTGCTCTTGTACTGCATGTCCTCTAGCTTCCAGGGGCTGCTCCGCTACACTGCTATAGCTAGCATGCTATTGACAAGAATGGGAAAAGGTATAATATCGCTCGCAGTTATTCGGCGAGATTACAAAATATAAGAGAATGACAAATGAGTGGATGAGTACATAAATCCCCGTCTATAAGAACAAGGATGCCATGTAAAAAGACTGTGTAAGCGCAATTGAGCAGAGATTAAGACAAAAGACTTGCATCATAAATTTTAGTTTTATGCCGAGAGCAACCATGATAAAGGAAAAACAGGTAGTTTGAAAAAGACATACAATTGGGTTCTGAAAGAGGTTTTATCGTAGGCTCCGGAGAGATAAAAAATTGCTTAATTTGAGCAAGCAAATATATGAACAAGGGGGTCACGACTAGTGTGAGGACACGGTGAGGATGTAGAAGATTTTTCTAAAAGCCCTTTTATTTTATCTTGATTCTGGATGTGCTTACTGCAAATATTGTAGATATGATGTCACAAAAAATATTTGTGTCTGGATGATATATTGGTATTTGGAGAATCGAAAGGAGAAATAAAGAAGTTAGAGATAGGGGGGAAAGCCGTGAAAGCATATGACTTTCTTTTGAGTGAAGTGTAGTGTGTATATATAATATAAGTTTAGAGGTTAAAATTTGAAAACATACCAGTTCTAGACCAGTTTCAGAGCTCTCCAGAGCCCAAAATACGCAGTGGTTTTTTATCTACAAAACCAGTCCCCGCCTAGTGAAAAAGGCTTTCCTTATTGTAGTTCATACCATAATGTTTGCAATTCTTTCTATGCTCTATCTATGATACATTCCATGTCATAAGACTTGGATGCTGTCGTTGATGTATGCACTCTTATTTTGTGTAAAAATAAGTTTTTTCGTCTATATGCAGCAATGAAGATGCAAAGAGGCTAATCGAGCTTGTAAAGGGCATCCCTTGCAAGATTAATCTAATCTCATTCAATCCACATAGTGGATCTTTCTTCAGACCAACCAAAGAGGAAAGGATGATTGAATTCCGAAATATGCTAGCTGAGGCAGGATGTGTAGTCCTTTTAAGACCGAGTAGAGGCGATGATCAGATGGCTGCATGTGGTCAGTTAGGCAAGCCCGGCACCATTCAAGCTCCGATGCTCCGTGTACCTCAGCAATTCAAAATGGTGGTTGGAAGTTCAACGTGTTCTTTATAA

Protein sequence

>MS.gene69695.t1

MSMATSAFANSSSTTFLLHKTIIPFSLTKTSPFLISLTTPSRRFLSASSLPSISADHTFNFSHSGDGNSVAVSSRGSKVLLKGMTYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKQMLSEHADFKALAVKEIHAASDGTRKILFTLDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTSEIGSITNVVFMGMGEPLHNIDNVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCTLAVSLNATTDEVRNWIMPINRKYKLDLLLETLREELSFKHKYKVLFEYVMLEGINDSNEDAKRLIELVKGIPCKINLISFNPHSGSFFRPTKEERMIEFRNMLAEAGCVVLLRPSRGDDQMAACGQLGKPGTIQAPMLRVPQQFKMVVGSSTCSL