Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40023.t1 | RHN80231.1 | 96.3 | 431 | 16 | 0 | 1 | 431 | 1 | 431 | 1.90E-233 | 818.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40023.t1 | O23614 | 65.7 | 443 | 140 | 7 | 1 | 431 | 1 | 443 | 5.8e-151 | 535.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40023.t1 | A0A396JTX0 | 96.3 | 431 | 16 | 0 | 1 | 431 | 1 | 431 | 1.3e-233 | 818.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene40023 | 0.842802 | 2.07E-58 | -1.69E-46 |
MS.gene049173 | MS.gene40023 | 0.850389 | 1.75E-60 | -1.69E-46 |
MS.gene049217 | MS.gene40023 | 0.854212 | 1.43E-61 | -1.69E-46 |
MS.gene049222 | MS.gene40023 | 0.877331 | 6.85E-69 | -1.69E-46 |
MS.gene049285 | MS.gene40023 | 0.881317 | 2.65E-70 | -1.69E-46 |
MS.gene049320 | MS.gene40023 | 0.859082 | 5.29E-63 | -1.69E-46 |
MS.gene049369 | MS.gene40023 | 0.8199 | 9.11E-53 | -1.69E-46 |
MS.gene049427 | MS.gene40023 | 0.804375 | 2.23E-49 | -1.69E-46 |
MS.gene049609 | MS.gene40023 | 0.86112 | 1.28E-63 | -1.69E-46 |
MS.gene049614 | MS.gene40023 | 0.805582 | 1.25E-49 | -1.69E-46 |
MS.gene049633 | MS.gene40023 | 0.838181 | 3.35E-57 | -1.69E-46 |
MS.gene049805 | MS.gene40023 | 0.842318 | 2.78E-58 | -1.69E-46 |
MS.gene049828 | MS.gene40023 | 0.807575 | 4.73E-50 | -1.69E-46 |
MS.gene05010 | MS.gene40023 | 0.8028 | 4.72E-49 | -1.69E-46 |
MS.gene050163 | MS.gene40023 | 0.870065 | 1.93E-66 | -1.69E-46 |
MS.gene050165 | MS.gene40023 | 0.859143 | 5.07E-63 | -1.69E-46 |
MS.gene050333 | MS.gene40023 | 0.856396 | 3.31E-62 | -1.69E-46 |
MS.gene050432 | MS.gene40023 | 0.81419 | 1.75E-51 | -1.69E-46 |
MS.gene050444 | MS.gene40023 | 0.834957 | 2.22E-56 | -1.69E-46 |
MS.gene050504 | MS.gene40023 | 0.844929 | 5.57E-59 | -1.69E-46 |
MS.gene050518 | MS.gene40023 | 0.859116 | 5.17E-63 | -1.69E-46 |
MS.gene050520 | MS.gene40023 | 0.813432 | 2.57E-51 | -1.69E-46 |
MS.gene050538 | MS.gene40023 | 0.809406 | 1.92E-50 | -1.69E-46 |
MS.gene050593 | MS.gene40023 | 0.811349 | 7.32E-51 | -1.69E-46 |
MS.gene050612 | MS.gene40023 | 0.846373 | 2.26E-59 | -1.69E-46 |
MS.gene050675 | MS.gene40023 | 0.865039 | 7.89E-65 | -1.69E-46 |
MS.gene050699 | MS.gene40023 | 0.842731 | 2.16E-58 | -1.69E-46 |
MS.gene050747 | MS.gene40023 | 0.848107 | 7.57E-60 | -1.69E-46 |
MS.gene050767 | MS.gene40023 | 0.83928 | 1.74E-57 | -1.69E-46 |
MS.gene050770 | MS.gene40023 | 0.843711 | 1.18E-58 | -1.69E-46 |
MS.gene050772 | MS.gene40023 | 0.884709 | 1.52E-71 | -1.69E-46 |
MS.gene05080 | MS.gene40023 | 0.869464 | 3.04E-66 | -1.69E-46 |
MS.gene050868 | MS.gene40023 | 0.818045 | 2.41E-52 | -1.69E-46 |
MS.gene050871 | MS.gene40023 | 0.814475 | 1.51E-51 | -1.69E-46 |
MS.gene050876 | MS.gene40023 | 0.812212 | 4.75E-51 | -1.69E-46 |
MS.gene050904 | MS.gene40023 | 0.800229 | 1.59E-48 | -1.69E-46 |
MS.gene050950 | MS.gene40023 | 0.842767 | 2.12E-58 | -1.69E-46 |
MS.gene050986 | MS.gene40023 | 0.834918 | 2.27E-56 | -1.69E-46 |
MS.gene05100 | MS.gene40023 | 0.838345 | 3.04E-57 | -1.69E-46 |
MS.gene05105 | MS.gene40023 | 0.846613 | 1.95E-59 | -1.69E-46 |
MS.gene051228 | MS.gene40023 | 0.885521 | 7.57E-72 | -1.69E-46 |
MS.gene051387 | MS.gene40023 | 0.803171 | 3.96E-49 | -1.69E-46 |
MS.gene051551 | MS.gene40023 | 0.805749 | 1.15E-49 | -1.69E-46 |
MS.gene051617 | MS.gene40023 | 0.853943 | 1.71E-61 | -1.69E-46 |
MS.gene051666 | MS.gene40023 | 0.836735 | 7.86E-57 | -1.69E-46 |
MS.gene051694 | MS.gene40023 | 0.817538 | 3.13E-52 | -1.69E-46 |
MS.gene051734 | MS.gene40023 | 0.814527 | 1.47E-51 | -1.69E-46 |
MS.gene051810 | MS.gene40023 | 0.870908 | 1.02E-66 | -1.69E-46 |
MS.gene051838 | MS.gene40023 | 0.804152 | 2.48E-49 | -1.69E-46 |
MS.gene051858 | MS.gene40023 | 0.854107 | 1.53E-61 | -1.69E-46 |
MS.gene051874 | MS.gene40023 | 0.817983 | 2.48E-52 | -1.69E-46 |
MS.gene051949 | MS.gene40023 | 0.86441 | 1.24E-64 | -1.69E-46 |
MS.gene052164 | MS.gene40023 | 0.826072 | 3.31E-54 | -1.69E-46 |
MS.gene052271 | MS.gene40023 | 0.853114 | 2.96E-61 | -1.69E-46 |
MS.gene052290 | MS.gene40023 | 0.832934 | 7.12E-56 | -1.69E-46 |
MS.gene052379 | MS.gene40023 | 0.866327 | 3.09E-65 | -1.69E-46 |
MS.gene052421 | MS.gene40023 | 0.829769 | 4.28E-55 | -1.69E-46 |
MS.gene052484 | MS.gene40023 | 0.806966 | 6.36E-50 | -1.69E-46 |
MS.gene052615 | MS.gene40023 | 0.840271 | 9.62E-58 | -1.69E-46 |
MS.gene052670 | MS.gene40023 | 0.807263 | 5.51E-50 | -1.69E-46 |
MS.gene052870 | MS.gene40023 | 0.872335 | 3.44E-67 | -1.69E-46 |
MS.gene052872 | MS.gene40023 | 0.864983 | 8.21E-65 | -1.69E-46 |
MS.gene052916 | MS.gene40023 | 0.812559 | 3.99E-51 | -1.69E-46 |
MS.gene052966 | MS.gene40023 | 0.817511 | 3.18E-52 | -1.69E-46 |
MS.gene053009 | MS.gene40023 | 0.881163 | 3.02E-70 | -1.69E-46 |
MS.gene053103 | MS.gene40023 | 0.813205 | 2.88E-51 | -1.69E-46 |
MS.gene053104 | MS.gene40023 | 0.834913 | 2.28E-56 | -1.69E-46 |
MS.gene053203 | MS.gene40023 | 0.811653 | 6.29E-51 | -1.69E-46 |
MS.gene053207 | MS.gene40023 | 0.865233 | 6.85E-65 | -1.69E-46 |
MS.gene053209 | MS.gene40023 | 0.808745 | 2.66E-50 | -1.69E-46 |
MS.gene053213 | MS.gene40023 | 0.862127 | 6.32E-64 | -1.69E-46 |
MS.gene053286 | MS.gene40023 | 0.862729 | 4.12E-64 | -1.69E-46 |
MS.gene053322 | MS.gene40023 | 0.847077 | 1.45E-59 | -1.69E-46 |
MS.gene053384 | MS.gene40023 | 0.810676 | 1.02E-50 | -1.69E-46 |
MS.gene053574 | MS.gene40023 | 0.855747 | 5.13E-62 | -1.69E-46 |
MS.gene053626 | MS.gene40023 | 0.825499 | 4.53E-54 | -1.69E-46 |
MS.gene053632 | MS.gene40023 | 0.876992 | 8.98E-69 | -1.69E-46 |
MS.gene053824 | MS.gene40023 | 0.855689 | 5.33E-62 | -1.69E-46 |
MS.gene053912 | MS.gene40023 | 0.801571 | 8.46E-49 | -1.69E-46 |
MS.gene053916 | MS.gene40023 | 0.865256 | 6.74E-65 | -1.69E-46 |
MS.gene054376 | MS.gene40023 | 0.811109 | 8.25E-51 | -1.69E-46 |
MS.gene054408 | MS.gene40023 | 0.816558 | 5.20E-52 | -1.69E-46 |
MS.gene054595 | MS.gene40023 | 0.802839 | 4.64E-49 | -1.69E-46 |
MS.gene054600 | MS.gene40023 | 0.868248 | 7.52E-66 | -1.69E-46 |
MS.gene054642 | MS.gene40023 | 0.882307 | 1.16E-70 | -1.69E-46 |
MS.gene054927 | MS.gene40023 | 0.824276 | 8.81E-54 | -1.69E-46 |
MS.gene05494 | MS.gene40023 | 0.819311 | 1.24E-52 | -1.69E-46 |
MS.gene054954 | MS.gene40023 | 0.845939 | 2.97E-59 | -1.69E-46 |
MS.gene05505 | MS.gene40023 | 0.870948 | 9.92E-67 | -1.69E-46 |
MS.gene055206 | MS.gene40023 | 0.833385 | 5.50E-56 | -1.69E-46 |
MS.gene055212 | MS.gene40023 | 0.826961 | 2.04E-54 | -1.69E-46 |
MS.gene055224 | MS.gene40023 | 0.82677 | 2.26E-54 | -1.69E-46 |
MS.gene055254 | MS.gene40023 | 0.819171 | 1.34E-52 | -1.69E-46 |
MS.gene055362 | MS.gene40023 | 0.850691 | 1.44E-60 | -1.69E-46 |
MS.gene055397 | MS.gene40023 | 0.855441 | 6.30E-62 | -1.69E-46 |
MS.gene055412 | MS.gene40023 | 0.815606 | 8.48E-52 | -1.69E-46 |
MS.gene055499 | MS.gene40023 | 0.838162 | 3.39E-57 | -1.69E-46 |
MS.gene055502 | MS.gene40023 | 0.847504 | 1.11E-59 | -1.69E-46 |
MS.gene055577 | MS.gene40023 | 0.865371 | 6.20E-65 | -1.69E-46 |
MS.gene055620 | MS.gene40023 | 0.814789 | 1.29E-51 | -1.69E-46 |
MS.gene055636 | MS.gene40023 | 0.809446 | 1.88E-50 | -1.69E-46 |
MS.gene055638 | MS.gene40023 | 0.814939 | 1.19E-51 | -1.69E-46 |
MS.gene055647 | MS.gene40023 | 0.815347 | 9.68E-52 | -1.69E-46 |
MS.gene055722 | MS.gene40023 | 0.884285 | 2.19E-71 | -1.69E-46 |
MS.gene055748 | MS.gene40023 | 0.844178 | 8.88E-59 | -1.69E-46 |
MS.gene055750 | MS.gene40023 | 0.835015 | 2.15E-56 | -1.69E-46 |
MS.gene055751 | MS.gene40023 | 0.844776 | 6.13E-59 | -1.69E-46 |
MS.gene05592 | MS.gene40023 | 0.849881 | 2.43E-60 | -1.69E-46 |
MS.gene055941 | MS.gene40023 | 0.853927 | 1.73E-61 | -1.69E-46 |
MS.gene056083 | MS.gene40023 | 0.846583 | 1.98E-59 | -1.69E-46 |
MS.gene056374 | MS.gene40023 | 0.826481 | 2.65E-54 | -1.69E-46 |
MS.gene056409 | MS.gene40023 | 0.805769 | 1.14E-49 | -1.69E-46 |
MS.gene056449 | MS.gene40023 | 0.87561 | 2.69E-68 | -1.69E-46 |
MS.gene056487 | MS.gene40023 | 0.817798 | 2.74E-52 | -1.69E-46 |
MS.gene056504 | MS.gene40023 | 0.80547 | 1.31E-49 | -1.69E-46 |
MS.gene056510 | MS.gene40023 | 0.856151 | 3.91E-62 | -1.69E-46 |
MS.gene056609 | MS.gene40023 | 0.820753 | 5.81E-53 | -1.69E-46 |
MS.gene056657 | MS.gene40023 | 0.870083 | 1.91E-66 | -1.69E-46 |
MS.gene056692 | MS.gene40023 | 0.825443 | 4.68E-54 | -1.69E-46 |
MS.gene056897 | MS.gene40023 | 0.85333 | 2.57E-61 | -1.69E-46 |
MS.gene056903 | MS.gene40023 | 0.826344 | 2.86E-54 | -1.69E-46 |
MS.gene056947 | MS.gene40023 | 0.844923 | 5.60E-59 | -1.69E-46 |
MS.gene057011 | MS.gene40023 | 0.812579 | 3.95E-51 | -1.69E-46 |
MS.gene057076 | MS.gene40023 | 0.859463 | 4.07E-63 | -1.69E-46 |
MS.gene057129 | MS.gene40023 | 0.86574 | 4.74E-65 | -1.69E-46 |
MS.gene057146 | MS.gene40023 | 0.831472 | 1.64E-55 | -1.69E-46 |
MS.gene057246 | MS.gene40023 | 0.809623 | 1.73E-50 | -1.69E-46 |
MS.gene057331 | MS.gene40023 | 0.846468 | 2.13E-59 | -1.69E-46 |
MS.gene05735 | MS.gene40023 | 0.827812 | 1.27E-54 | -1.69E-46 |
MS.gene057416 | MS.gene40023 | 0.854715 | 1.02E-61 | -1.69E-46 |
MS.gene057658 | MS.gene40023 | 0.818745 | 1.67E-52 | -1.69E-46 |
MS.gene057734 | MS.gene40023 | 0.81193 | 5.47E-51 | -1.69E-46 |
MS.gene057831 | MS.gene40023 | 0.821628 | 3.65E-53 | -1.69E-46 |
MS.gene057926 | MS.gene40023 | 0.825797 | 3.85E-54 | -1.69E-46 |
MS.gene058019 | MS.gene40023 | 0.81169 | 6.17E-51 | -1.69E-46 |
MS.gene058082 | MS.gene40023 | 0.802031 | 6.80E-49 | -1.69E-46 |
MS.gene058130 | MS.gene40023 | 0.841902 | 3.58E-58 | -1.69E-46 |
MS.gene058293 | MS.gene40023 | 0.817304 | 3.53E-52 | -1.69E-46 |
MS.gene058323 | MS.gene40023 | 0.83009 | 3.57E-55 | -1.69E-46 |
MS.gene058338 | MS.gene40023 | 0.815957 | 7.08E-52 | -1.69E-46 |
MS.gene05837 | MS.gene40023 | 0.820849 | 5.52E-53 | -1.69E-46 |
MS.gene058419 | MS.gene40023 | 0.862891 | 3.68E-64 | -1.69E-46 |
MS.gene058544 | MS.gene40023 | 0.810578 | 1.07E-50 | -1.69E-46 |
MS.gene058723 | MS.gene40023 | 0.88603 | 4.88E-72 | -1.69E-46 |
MS.gene058748 | MS.gene40023 | 0.842144 | 3.09E-58 | -1.69E-46 |
MS.gene058773 | MS.gene40023 | 0.878587 | 2.49E-69 | -1.69E-46 |
MS.gene058838 | MS.gene40023 | 0.816292 | 5.96E-52 | -1.69E-46 |
MS.gene058948 | MS.gene40023 | 0.806987 | 6.30E-50 | -1.69E-46 |
MS.gene059022 | MS.gene40023 | 0.845455 | 4.02E-59 | -1.69E-46 |
MS.gene059023 | MS.gene40023 | 0.850827 | 1.32E-60 | -1.69E-46 |
MS.gene059029 | MS.gene40023 | 0.877772 | 4.80E-69 | -1.69E-46 |
MS.gene059079 | MS.gene40023 | 0.811234 | 7.75E-51 | -1.69E-46 |
MS.gene05913 | MS.gene40023 | 0.860366 | 2.17E-63 | -1.69E-46 |
MS.gene05934 | MS.gene40023 | 0.845776 | 3.29E-59 | -1.69E-46 |
MS.gene059536 | MS.gene40023 | 0.828478 | 8.79E-55 | -1.69E-46 |
MS.gene059676 | MS.gene40023 | 0.804798 | 1.82E-49 | -1.69E-46 |
MS.gene059677 | MS.gene40023 | 0.875087 | 4.06E-68 | -1.69E-46 |
MS.gene059688 | MS.gene40023 | 0.823957 | 1.05E-53 | -1.69E-46 |
MS.gene059692 | MS.gene40023 | 0.82669 | 2.36E-54 | -1.69E-46 |
MS.gene059695 | MS.gene40023 | 0.830293 | 3.19E-55 | -1.69E-46 |
MS.gene059711 | MS.gene40023 | 0.825372 | 4.86E-54 | -1.69E-46 |
MS.gene059718 | MS.gene40023 | 0.883703 | 3.58E-71 | -1.69E-46 |
MS.gene059756 | MS.gene40023 | 0.818583 | 1.82E-52 | -1.69E-46 |
MS.gene059858 | MS.gene40023 | 0.802525 | 5.38E-49 | -1.69E-46 |
MS.gene059865 | MS.gene40023 | 0.831182 | 1.93E-55 | -1.69E-46 |
MS.gene05986 | MS.gene40023 | 0.826853 | 2.16E-54 | -1.69E-46 |
MS.gene059902 | MS.gene40023 | 0.847964 | 8.28E-60 | -1.69E-46 |
MS.gene059960 | MS.gene40023 | 0.868463 | 6.41E-66 | -1.69E-46 |
MS.gene060193 | MS.gene40023 | 0.803907 | 2.79E-49 | -1.69E-46 |
MS.gene060356 | MS.gene40023 | 0.823379 | 1.43E-53 | -1.69E-46 |
MS.gene060703 | MS.gene40023 | 0.804526 | 2.07E-49 | -1.69E-46 |
MS.gene060762 | MS.gene40023 | 0.857672 | 1.39E-62 | -1.69E-46 |
MS.gene06077 | MS.gene40023 | 0.814917 | 1.21E-51 | -1.69E-46 |
MS.gene060804 | MS.gene40023 | 0.834648 | 2.65E-56 | -1.69E-46 |
MS.gene060818 | MS.gene40023 | 0.82523 | 5.25E-54 | -1.69E-46 |
MS.gene060835 | MS.gene40023 | 0.818907 | 1.53E-52 | -1.69E-46 |
MS.gene060837 | MS.gene40023 | 0.821475 | 3.96E-53 | -1.69E-46 |
MS.gene06092 | MS.gene40023 | 0.855667 | 5.41E-62 | -1.69E-46 |
MS.gene060982 | MS.gene40023 | 0.802936 | 4.43E-49 | -1.69E-46 |
MS.gene061041 | MS.gene40023 | 0.851778 | 7.11E-61 | -1.69E-46 |
MS.gene06111 | MS.gene40023 | 0.801327 | 9.49E-49 | -1.69E-46 |
MS.gene061150 | MS.gene40023 | 0.870364 | 1.54E-66 | -1.69E-46 |
MS.gene061200 | MS.gene40023 | 0.866599 | 2.53E-65 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40023.t1 | MTR_1g073130 | 96.056 | 431 | 17 | 0 | 1 | 431 | 1 | 431 | 0.0 | 847 |
MS.gene40023.t1 | MTR_1g052135 | 35.873 | 315 | 192 | 5 | 122 | 431 | 113 | 422 | 8.33e-61 | 206 |
MS.gene40023.t1 | MTR_1g052135 | 35.616 | 292 | 179 | 4 | 144 | 431 | 1 | 287 | 1.77e-54 | 185 |
MS.gene40023.t1 | MTR_8g088150 | 35.873 | 315 | 191 | 5 | 121 | 431 | 98 | 405 | 1.19e-52 | 183 |
MS.gene40023.t1 | MTR_8g088150 | 33.205 | 259 | 159 | 6 | 121 | 372 | 98 | 349 | 2.58e-39 | 145 |
MS.gene40023.t1 | MTR_1g052135 | 30.870 | 230 | 151 | 3 | 122 | 347 | 113 | 338 | 1.78e-35 | 134 |
MS.gene40023.t1 | MTR_8g088150 | 32.340 | 235 | 148 | 5 | 121 | 351 | 98 | 325 | 1.07e-32 | 126 |
MS.gene40023.t1 | MTR_8g088150 | 32.680 | 153 | 97 | 3 | 121 | 271 | 98 | 246 | 3.06e-20 | 91.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40023.t1 | AT4G17740 | 66.667 | 441 | 129 | 9 | 1 | 431 | 1 | 433 | 0.0 | 561 |
MS.gene40023.t1 | AT4G17740 | 66.292 | 445 | 134 | 10 | 1 | 431 | 1 | 443 | 0.0 | 557 |
MS.gene40023.t1 | AT3G57680 | 35.000 | 360 | 207 | 7 | 94 | 431 | 79 | 433 | 3.24e-64 | 215 |
MS.gene40023.t1 | AT3G57680 | 37.676 | 284 | 165 | 5 | 155 | 431 | 6 | 284 | 1.66e-55 | 188 |
MS.gene40023.t1 | AT3G57680 | 37.676 | 284 | 165 | 5 | 155 | 431 | 6 | 284 | 1.66e-55 | 188 |
MS.gene40023.t1 | AT5G46390 | 35.331 | 317 | 184 | 7 | 124 | 431 | 125 | 429 | 3.47e-45 | 164 |
MS.gene40023.t1 | AT5G46390 | 33.463 | 257 | 149 | 8 | 124 | 370 | 125 | 369 | 4.68e-32 | 126 |
Find 98 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAGAGAATCTCCTCTTTC+TGG | 0.228002 | 1.4:-59723703 | MS.gene40023:CDS |
ACAACTTACGAGATGCATTT+TGG | 0.229630 | 1.4:+59720871 | None:intergenic |
TAATGTAAATGCATTTGTTT+TGG | 0.265017 | 1.4:-59719977 | MS.gene40023:CDS |
TTGGCAATCTCAATTCCTTC+TGG | 0.273884 | 1.4:+59719853 | None:intergenic |
AAACAAACGTTGTTTACTTT+TGG | 0.274441 | 1.4:+59724753 | None:intergenic |
CTGTTTGTGCGGTTGGTTGC+TGG | 0.295497 | 1.4:-59724657 | MS.gene40023:CDS |
TGTCTCTTCACGGTTGTTCA+TGG | 0.323178 | 1.4:+59723587 | None:intergenic |
TTCTTTACTGTTTGTGCGGT+TGG | 0.354326 | 1.4:-59724664 | MS.gene40023:CDS |
GGAACTAAAGGCGCTCTAAC+TGG | 0.372863 | 1.4:-59722327 | MS.gene40023:CDS |
TCCTTCGCAAAAGGAGGAAA+TGG | 0.377090 | 1.4:-59724713 | MS.gene40023:CDS |
CGAAGGAAACTCCAACTTTG+AGG | 0.381219 | 1.4:+59724729 | None:intergenic |
TGTTGGCTCTCCGTACAATA+TGG | 0.382476 | 1.4:+59718374 | None:intergenic |
TTAATGGACAGAGTTGGTTT+AGG | 0.396696 | 1.4:-59723638 | MS.gene40023:CDS |
TCGTGGGGTTCGAGATATAC+TGG | 0.396807 | 1.4:-59719433 | MS.gene40023:CDS |
TTGTGCTGCAGGTTTCAAAC+TGG | 0.412007 | 1.4:-59724863 | MS.gene40023:intron |
GCAAAAGGAGGAAATGGAAC+AGG | 0.418772 | 1.4:-59724707 | MS.gene40023:CDS |
ATCGGATGGCATGTCTGCTT+TGG | 0.427225 | 1.4:+59722278 | None:intergenic |
GCTCTATATGCAGGACCTCC+TGG | 0.429225 | 1.4:+59722231 | None:intergenic |
TTGTACGGAGAGCCAACATT+TGG | 0.429603 | 1.4:-59718369 | MS.gene40023:CDS |
GAATTGAGATTGCCAAGCTT+TGG | 0.434684 | 1.4:-59719846 | MS.gene40023:intron |
TGGCAATCTCAATTCCTTCT+GGG | 0.435717 | 1.4:+59719854 | None:intergenic |
TTCTGAACCTCTGGCTGTGC+TGG | 0.435964 | 1.4:-59719382 | MS.gene40023:intron |
TTCTGTGCTCATATCATCAA+TGG | 0.441209 | 1.4:+59722179 | None:intergenic |
GTTGTCATTTCAGCTTCTCC+AGG | 0.446510 | 1.4:-59722249 | MS.gene40023:CDS |
CCTAGCAACTTCTGAACCTC+TGG | 0.447872 | 1.4:-59719391 | MS.gene40023:CDS |
ACTGGAGTGGGGATATCAAT+AGG | 0.449955 | 1.4:-59722309 | MS.gene40023:CDS |
AGAGGAGATTCTCTTCCGTC+AGG | 0.456230 | 1.4:+59723709 | None:intergenic |
GTTGGAGTTTCCTTCGCAAA+AGG | 0.459051 | 1.4:-59724722 | MS.gene40023:CDS |
TTGCACAGTCTTGACTTCAC+TGG | 0.459820 | 1.4:+59720954 | None:intergenic |
TGATATGAGCACAGAAAAGT+TGG | 0.461597 | 1.4:-59722172 | MS.gene40023:CDS |
GTCTCTTCACGGTTGTTCAT+GGG | 0.462782 | 1.4:+59723588 | None:intergenic |
CTCAAACTTCTGAACTTCTC+AGG | 0.466160 | 1.4:+59722462 | None:intergenic |
CCAGAGGTTCAGAAGTTGCT+AGG | 0.467344 | 1.4:+59719391 | None:intergenic |
GGAGAGCCAACATTTGGAAA+AGG | 0.469937 | 1.4:-59718363 | MS.gene40023:CDS |
AAGAAGCAATCAATACGTTC+AGG | 0.477783 | 1.4:-59720005 | MS.gene40023:CDS |
TTCTCCATGCCTCCAGAAAG+AGG | 0.478035 | 1.4:+59723691 | None:intergenic |
TGCTCATATCATCAATGGCC+AGG | 0.482743 | 1.4:+59722184 | None:intergenic |
TGAGAAGTTCAGAAGTTTGA+GGG | 0.485226 | 1.4:-59722460 | MS.gene40023:intron |
TGTATATTTGTGATAGTCGT+GGG | 0.489052 | 1.4:-59719449 | MS.gene40023:CDS |
TGGAGTTATGTTGGTTGTCT+CGG | 0.490962 | 1.4:-59724637 | MS.gene40023:CDS |
GATGGCATGTCTGCTTTGGT+AGG | 0.496814 | 1.4:+59722282 | None:intergenic |
AAGTCATACATGTCTCTTCA+CGG | 0.503051 | 1.4:+59723577 | None:intergenic |
ATCTCCTCTTTCTGGAGGCA+TGG | 0.503321 | 1.4:-59723695 | MS.gene40023:CDS |
AAGAAAGATGCTTGCCACAT+TGG | 0.503483 | 1.4:-59722511 | MS.gene40023:CDS |
CTTGTTATCTTTCAATGCAC+CGG | 0.503714 | 1.4:+59718401 | None:intergenic |
AGAGATAAAACTTACAAGAA+GGG | 0.510527 | 1.4:+59724595 | None:intergenic |
TTTGTCTGGAGATGTTATCC+TGG | 0.515590 | 1.4:-59722202 | MS.gene40023:CDS |
GGAAATTACAGAGGACCTGA+TGG | 0.515701 | 1.4:-59721372 | MS.gene40023:intron |
CTGTGCAAGTTACCTGCTGC+AGG | 0.516744 | 1.4:-59720939 | MS.gene40023:CDS |
AAAGGCGCTCTAACTGGAGT+GGG | 0.521920 | 1.4:-59722321 | MS.gene40023:CDS |
GAGAGCCAACATTTGGAAAA+GGG | 0.523087 | 1.4:-59718362 | MS.gene40023:CDS |
GTTGGTTGCTGGAGTTATGT+TGG | 0.526117 | 1.4:-59724646 | MS.gene40023:CDS |
CAGAGGTTCAGAAGTTGCTA+GGG | 0.526166 | 1.4:+59719392 | None:intergenic |
AATGCAACAGAGCTTCCATC+AGG | 0.527673 | 1.4:+59721357 | None:intergenic |
AGACATATCTTACCAAAGCT+TGG | 0.528339 | 1.4:+59719834 | None:intergenic |
GTCCCTTGAAGGGGCCCTGA+CGG | 0.534821 | 1.4:-59723724 | MS.gene40023:intron |
CTGAGAAGTTCAGAAGTTTG+AGG | 0.536007 | 1.4:-59722461 | MS.gene40023:CDS |
GTGTATATTTGTGATAGTCG+TGG | 0.539212 | 1.4:-59719450 | MS.gene40023:CDS |
TGAAGGCAGTCTGGAACTAA+AGG | 0.547910 | 1.4:-59722339 | MS.gene40023:intron |
GGGTAACGAAGAGGGAAAGA+AGG | 0.553709 | 1.4:+59724967 | None:intergenic |
GTCATTTCAGCTTCTCCAGG+AGG | 0.556960 | 1.4:-59722246 | MS.gene40023:CDS |
AACAAGCGGGCCATATTGTA+CGG | 0.558030 | 1.4:-59718384 | MS.gene40023:CDS |
GGAGATAATTCCCCAACAGT+TGG | 0.565445 | 1.4:-59720918 | MS.gene40023:CDS |
TGAGCTAGCAATGATCTCCA+TGG | 0.568812 | 1.4:+59724999 | None:intergenic |
AATTCTTGTCGATATATGCT+CGG | 0.570307 | 1.4:+59723661 | None:intergenic |
GGGGAATTATCTCCTGCAGC+AGG | 0.571198 | 1.4:+59720927 | None:intergenic |
GGAGTTTCCTTCGCAAAAGG+AGG | 0.571943 | 1.4:-59724719 | MS.gene40023:CDS |
GGAGGTCCTGCATATAGAGC+TGG | 0.574441 | 1.4:-59722228 | MS.gene40023:CDS |
TACGTCAGAACCACTACGTA+TGG | 0.575100 | 1.4:+59721332 | None:intergenic |
AAAACACCAGCTCTATATGC+AGG | 0.578644 | 1.4:+59722222 | None:intergenic |
TGAGCCTAATCAGGTAAACA+AGG | 0.584513 | 1.4:-59718451 | MS.gene40023:intron |
ATGGCATGTCTGCTTTGGTA+GGG | 0.587538 | 1.4:+59722283 | None:intergenic |
AGTGCCAGCGAAATATTAGC+CGG | 0.591253 | 1.4:-59718420 | MS.gene40023:CDS |
TGCACCGGCTAATATTTCGC+TGG | 0.596104 | 1.4:+59718416 | None:intergenic |
GATATGAGCACAGAAAAGTT+GGG | 0.598281 | 1.4:-59722171 | MS.gene40023:CDS |
GAGGAGATTCTCTTCCGTCA+GGG | 0.599213 | 1.4:+59723710 | None:intergenic |
TGCATTGAAAGATAACAAGC+GGG | 0.604470 | 1.4:-59718397 | MS.gene40023:CDS |
CGAGATATACTGGATACAGA+TGG | 0.605141 | 1.4:-59719423 | MS.gene40023:CDS |
TAAAGGCGCTCTAACTGGAG+TGG | 0.610725 | 1.4:-59722322 | MS.gene40023:CDS |
GTGCATTGAAAGATAACAAG+CGG | 0.614192 | 1.4:-59718398 | MS.gene40023:CDS |
ATGCTTCTTTACTGTTTGTG+CGG | 0.614941 | 1.4:-59724668 | MS.gene40023:CDS |
TACCAACTTACGTTAGAGCT+AGG | 0.615400 | 1.4:+59721304 | None:intergenic |
AAAGCAGACATGCCATCCGA+TGG | 0.615475 | 1.4:-59722276 | MS.gene40023:CDS |
TGAAATGACAACAAGTCCAT+CGG | 0.616320 | 1.4:+59722260 | None:intergenic |
AGATTGTTGGGTAACGAAGA+GGG | 0.618034 | 1.4:+59724959 | None:intergenic |
AGAGAATCTCCTCTTTCTGG+AGG | 0.628574 | 1.4:-59723700 | MS.gene40023:CDS |
GAGATTGTTGGGTAACGAAG+AGG | 0.630735 | 1.4:+59724958 | None:intergenic |
CAAAAGGAGGAAATGGAACA+GGG | 0.635239 | 1.4:-59724706 | MS.gene40023:CDS |
TGAAAACCTTGATTCTACTG+TGG | 0.644897 | 1.4:+59724830 | None:intergenic |
TAAATCACCTATTATCTCTG+AGG | 0.651600 | 1.4:+59719953 | None:intergenic |
ATGACAACAAGTCCATCGGA+TGG | 0.653408 | 1.4:+59722264 | None:intergenic |
AAAATTACCAGCACAGCCAG+AGG | 0.668041 | 1.4:+59719375 | None:intergenic |
GAGCCTAATCAGGTAAACAA+GGG | 0.673106 | 1.4:-59718450 | MS.gene40023:intron |
GTTGCATTGACCATACGTAG+TGG | 0.683901 | 1.4:-59721342 | MS.gene40023:CDS |
CTATCAATTAGGTTGGACAA+AGG | 0.690063 | 1.4:-59719480 | MS.gene40023:intron |
AAGGCGCTCTAACTGGAGTG+GGG | 0.697650 | 1.4:-59722320 | MS.gene40023:CDS |
GTATATTTGTGATAGTCGTG+GGG | 0.714608 | 1.4:-59719448 | MS.gene40023:CDS |
AGTGAAGGGATCATCCAATG+TGG | 0.753176 | 1.4:+59722497 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATACAAAAAATTAGT+TGG | - | chr1.4:59723065-59723084 | MS.gene40023:intron | 10.0% |
!! | TAAAAACAAGAAAAAAAATA+AGG | + | chr1.4:59723816-59723835 | None:intergenic | 10.0% |
!!! | CATTTTTTTACTTTTAAAAT+GGG | + | chr1.4:59720668-59720687 | None:intergenic | 10.0% |
!!! | TCATTTTTTTACTTTTAAAA+TGG | + | chr1.4:59720669-59720688 | None:intergenic | 10.0% |
!!! | TGAATGTTTTTAAATTTTTA+TGG | - | chr1.4:59722727-59722746 | MS.gene40023:intron | 10.0% |
!! | AATCAATTTAATTGTGATTA+TGG | - | chr1.4:59724739-59724758 | MS.gene40023:CDS | 15.0% |
!! | AGAAATTAAATAATTGTAAC+CGG | + | chr1.4:59723634-59723653 | None:intergenic | 15.0% |
!! | ATCAATTTAATTGTGATTAT+GGG | - | chr1.4:59724740-59724759 | MS.gene40023:CDS | 15.0% |
!! | TGATAACTTGATATAAATAT+TGG | - | chr1.4:59721413-59721432 | MS.gene40023:intron | 15.0% |
!! | TTAAACTTTAAGTATCAAAA+TGG | - | chr1.4:59720630-59720649 | MS.gene40023:intron | 15.0% |
!!! | AAAAACTAAAATTTTGTTGA+AGG | - | chr1.4:59721000-59721019 | MS.gene40023:intron | 15.0% |
!!! | AAAGTAACTAAATTTTCAAT+TGG | - | chr1.4:59718573-59718592 | MS.gene40023:intron | 15.0% |
!!! | AAGTAACTAAATTTTCAATT+GGG | - | chr1.4:59718574-59718593 | MS.gene40023:intron | 15.0% |
!!! | AATTTTTTATCTTATCATTC+CGG | - | chr1.4:59723612-59723631 | MS.gene40023:CDS | 15.0% |
!!! | ACTCTTTATTTTCTTATTAA+TGG | - | chr1.4:59719483-59719502 | MS.gene40023:intron | 15.0% |
!!! | ATAAAATTTGGTCTTTTAAA+TGG | + | chr1.4:59721909-59721928 | None:intergenic | 15.0% |
!!! | ATTTTCTTTGTAAAAGAAAA+AGG | + | chr1.4:59722281-59722300 | None:intergenic | 15.0% |
!!! | TTCAACAAAATTTTAGTTTT+TGG | + | chr1.4:59721001-59721020 | None:intergenic | 15.0% |
!! | AAAAGAGACTTAGAATTAAA+TGG | - | chr1.4:59721684-59721703 | MS.gene40023:intron | 20.0% |
!! | AATGGTCTATCTATTATATA+TGG | - | chr1.4:59721702-59721721 | MS.gene40023:intron | 20.0% |
!! | ATATATAGTTACATTACACT+CGG | - | chr1.4:59722173-59722192 | MS.gene40023:CDS | 20.0% |
!! | ATCTATTTCAAAATGGTAAA+AGG | + | chr1.4:59723726-59723745 | None:intergenic | 20.0% |
!! | ATGAGAAAATATGTTATCTA+CGG | + | chr1.4:59724378-59724397 | None:intergenic | 20.0% |
!! | ATTATAGCAAGTAAGAATTA+TGG | + | chr1.4:59722621-59722640 | None:intergenic | 20.0% |
!! | CTATATGTGAAATAAACTAA+AGG | + | chr1.4:59720948-59720967 | None:intergenic | 20.0% |
!! | CTGAATATTCAATACTAAAA+TGG | - | chr1.4:59719365-59719384 | MS.gene40023:intron | 20.0% |
!! | TAAAATGGTTTAACTGAAAT+CGG | - | chr1.4:59719975-59719994 | MS.gene40023:CDS | 20.0% |
!! | TATTAAATTCAGTCATTAGT+TGG | - | chr1.4:59723191-59723210 | MS.gene40023:intron | 20.0% |
!! | TCAATTTAATTGTGATTATG+GGG | - | chr1.4:59724741-59724760 | MS.gene40023:CDS | 20.0% |
!! | TCCTTAAAATATTCATTAAC+TGG | + | chr1.4:59722699-59722718 | None:intergenic | 20.0% |
!! | TCTATGTACTAACTAAAAAA+GGG | - | chr1.4:59722528-59722547 | MS.gene40023:intron | 20.0% |
!! | TCTTTATAATGAATTTGTGT+TGG | - | chr1.4:59718796-59718815 | MS.gene40023:intron | 20.0% |
!! | TGAAAAGTAAAATGTGATAT+TGG | + | chr1.4:59722934-59722953 | None:intergenic | 20.0% |
!! | TTACCATACAATTTACAAAT+TGG | + | chr1.4:59724865-59724884 | None:intergenic | 20.0% |
!! | TTCTATGTACTAACTAAAAA+AGG | - | chr1.4:59722527-59722546 | MS.gene40023:intron | 20.0% |
!!! | AATTTTATATAACCAACTGT+TGG | + | chr1.4:59722453-59722472 | None:intergenic | 20.0% |
!!! | ACAAATATTGTTATTTTACG+CGG | + | chr1.4:59718477-59718496 | None:intergenic | 20.0% |
!!! | ACCAGTTAATGAATATTTTA+AGG | - | chr1.4:59722695-59722714 | MS.gene40023:intron | 20.0% |
!!! | AGTAACTAAATTTTCAATTG+GGG | - | chr1.4:59718575-59718594 | MS.gene40023:intron | 20.0% |
!!! | ATCACAATTAAATTGATTCA+TGG | + | chr1.4:59724737-59724756 | None:intergenic | 20.0% |
!!! | ATGAGAAGTACAATAAAATT+TGG | + | chr1.4:59721921-59721940 | None:intergenic | 20.0% |
!!! | ATTATTTAATTTCTGCAGTA+TGG | - | chr1.4:59723640-59723659 | MS.gene40023:CDS | 20.0% |
!!! | ATTTTATATAACCAACTGTT+GGG | + | chr1.4:59722452-59722471 | None:intergenic | 20.0% |
!!! | GAAAAAGGTATCAATTAATT+AGG | + | chr1.4:59722266-59722285 | None:intergenic | 20.0% |
!!! | GATTGTTTCTCTTTATATTT+AGG | - | chr1.4:59722838-59722857 | MS.gene40023:intron | 20.0% |
!!! | GTTGATAAAAAAAAAGTAAG+AGG | + | chr1.4:59719815-59719834 | None:intergenic | 20.0% |
!!! | TAATGTAAATGCATTTGTTT+TGG | - | chr1.4:59723379-59723398 | MS.gene40023:intron | 20.0% |
!!! | TAGTAATACTTTTAACTTGT+TGG | + | chr1.4:59721384-59721403 | None:intergenic | 20.0% |
!!! | TATATCGACAAGAATTTTAA+TGG | - | chr1.4:59719702-59719721 | MS.gene40023:intron | 20.0% |
! | AATAGATTGCATTGCAAAAT+TGG | - | chr1.4:59723739-59723758 | MS.gene40023:intron | 25.0% |
! | AATGAATTTGTGTTGGAATT+TGG | - | chr1.4:59718803-59718822 | MS.gene40023:intron | 25.0% |
! | ACAAGTAGTCATACTAAAAT+AGG | - | chr1.4:59721512-59721531 | MS.gene40023:intron | 25.0% |
! | ACAATTTACAAATTGGAACT+CGG | + | chr1.4:59724858-59724877 | None:intergenic | 25.0% |
! | AGAGATAAAACTTACAAGAA+GGG | + | chr1.4:59718764-59718783 | None:intergenic | 25.0% |
! | ATAGATTGCATTGCAAAATT+GGG | - | chr1.4:59723740-59723759 | MS.gene40023:intron | 25.0% |
! | ATATAGTACTAGGTAGATTT+GGG | + | chr1.4:59719532-59719551 | None:intergenic | 25.0% |
! | ATCACATGATTAATGCATAT+TGG | + | chr1.4:59722566-59722585 | None:intergenic | 25.0% |
! | ATGAATTTGTGTTGGAATTT+GGG | - | chr1.4:59718804-59718823 | MS.gene40023:intron | 25.0% |
! | CAAGAGTAAGAGATAAATTT+CGG | + | chr1.4:59719414-59719433 | None:intergenic | 25.0% |
! | CAATGCAATCTATTTCAAAA+TGG | + | chr1.4:59723733-59723752 | None:intergenic | 25.0% |
! | CATTTCTTAATAAACTGTCA+TGG | - | chr1.4:59724515-59724534 | MS.gene40023:intron | 25.0% |
! | CCAAACATACAAAGTATAAA+CGG | + | chr1.4:59724437-59724456 | None:intergenic | 25.0% |
! | CTCTCATTTCATAGTTATTT+AGG | - | chr1.4:59724580-59724599 | MS.gene40023:intron | 25.0% |
! | GAAAAAAAATAAGGTATGAC+TGG | + | chr1.4:59723807-59723826 | None:intergenic | 25.0% |
! | GAGGAATAGAAAATTGTTAT+CGG | + | chr1.4:59723031-59723050 | None:intergenic | 25.0% |
! | GTAATTAAGAACCTCATAAA+TGG | + | chr1.4:59721866-59721885 | None:intergenic | 25.0% |
! | GTTCCAATTTGTAAATTGTA+TGG | - | chr1.4:59724859-59724878 | MS.gene40023:intron | 25.0% |
! | TAGAGATAAAACTTACAAGA+AGG | + | chr1.4:59718765-59718784 | None:intergenic | 25.0% |
! | TATATAGTACTAGGTAGATT+TGG | + | chr1.4:59719533-59719552 | None:intergenic | 25.0% |
! | TATCTGATATAGTTAAATGC+TGG | - | chr1.4:59720088-59720107 | MS.gene40023:intron | 25.0% |
! | TCAAATTTGTGAAGATAAGT+AGG | - | chr1.4:59720199-59720218 | MS.gene40023:intron | 25.0% |
! | TCAGAATGAATTACAAAGAT+AGG | + | chr1.4:59719349-59719368 | None:intergenic | 25.0% |
! | TCTAACAGATACTATCAATT+AGG | - | chr1.4:59723865-59723884 | MS.gene40023:intron | 25.0% |
! | TGAATATCTCTATTTCATGT+GGG | - | chr1.4:59719215-59719234 | MS.gene40023:intron | 25.0% |
! | TGATCATTGTTAATTATGAG+AGG | - | chr1.4:59720483-59720502 | MS.gene40023:intron | 25.0% |
! | TTAACTATATCAGATAGTTC+TGG | + | chr1.4:59720084-59720103 | None:intergenic | 25.0% |
! | TTAATAAACTGTCATGGATT+TGG | - | chr1.4:59724521-59724540 | MS.gene40023:intron | 25.0% |
! | TTCCATTGTTGTAGATAAAA+AGG | - | chr1.4:59721573-59721592 | MS.gene40023:intron | 25.0% |
!! | AAACAAACGTTGTTTACTTT+TGG | + | chr1.4:59718606-59718625 | None:intergenic | 25.0% |
!! | ATATTTTCTCATCTAATTCG+TGG | - | chr1.4:59724386-59724405 | MS.gene40023:intron | 25.0% |
!! | CTAAGTCTCTTTTCATAATT+CGG | + | chr1.4:59721677-59721696 | None:intergenic | 25.0% |
!! | GCTGAACAAAAACAATTTTA+TGG | - | chr1.4:59719837-59719856 | MS.gene40023:intron | 25.0% |
!! | TACCTTTTTATCTACAACAA+TGG | + | chr1.4:59721578-59721597 | None:intergenic | 25.0% |
!! | TAGTGATTGAAAGTATATAG+AGG | + | chr1.4:59723443-59723462 | None:intergenic | 25.0% |
!! | TATTGACTACATGGATTTAA+CGG | + | chr1.4:59721750-59721769 | None:intergenic | 25.0% |
!! | TATTTTCTTATTAATGGCTG+AGG | - | chr1.4:59719489-59719508 | MS.gene40023:intron | 25.0% |
!! | TTTTATATAACCAACTGTTG+GGG | + | chr1.4:59722451-59722470 | None:intergenic | 25.0% |
!!! | ATGTATTGATGCCTTTTTTT+TGG | - | chr1.4:59722965-59722984 | MS.gene40023:intron | 25.0% |
!!! | CAGGAAAGTTTTTTTTAAGT+AGG | - | chr1.4:59720743-59720762 | MS.gene40023:intron | 25.0% |
!!! | TAAGTGAAACTACTAGTTTT+AGG | - | chr1.4:59724614-59724633 | MS.gene40023:CDS | 25.0% |
AAAAAATAAGGTATGACTGG+AGG | + | chr1.4:59723804-59723823 | None:intergenic | 30.0% | |
AAATAAATAAGACAGCTGCA+AGG | + | chr1.4:59722900-59722919 | None:intergenic | 30.0% | |
AAGATGAATCAATGCATTTC+AGG | - | chr1.4:59722358-59722377 | MS.gene40023:intron | 30.0% | |
AATAAATAAGACAGCTGCAA+GGG | + | chr1.4:59722899-59722918 | None:intergenic | 30.0% | |
AATAACAATATTTGTGCTGC+AGG | - | chr1.4:59718482-59718501 | MS.gene40023:intron | 30.0% | |
AATAGTCAGAATGATGAAGA+AGG | + | chr1.4:59718452-59718471 | None:intergenic | 30.0% | |
AATTCTTGTCGATATATGCT+CGG | + | chr1.4:59719698-59719717 | None:intergenic | 30.0% | |
ACAGATACTATCAATTAGGT+TGG | - | chr1.4:59723869-59723888 | MS.gene40023:intron | 30.0% | |
ATAGTCAGAATGATGAAGAA+GGG | + | chr1.4:59718451-59718470 | None:intergenic | 30.0% | |
ATAGTTAGTGTGGATGTATT+TGG | + | chr1.4:59722783-59722802 | None:intergenic | 30.0% | |
ATCATTTATGATTGCCTTCT+AGG | - | chr1.4:59719887-59719906 | MS.gene40023:intron | 30.0% | |
ATGCAACTTTACAGTTCTTA+AGG | + | chr1.4:59721455-59721474 | None:intergenic | 30.0% | |
ATGCAAGATAACATCTTCAT+GGG | - | chr1.4:59720262-59720281 | MS.gene40023:intron | 30.0% | |
ATTGTGATTATGGGGAAAAT+AGG | - | chr1.4:59724749-59724768 | MS.gene40023:CDS | 30.0% | |
CACACTATTCACCAAAAAAA+AGG | + | chr1.4:59722979-59722998 | None:intergenic | 30.0% | |
CACTACTAGTATATAGTACT+AGG | + | chr1.4:59719542-59719561 | None:intergenic | 30.0% | |
CCGTTTATACTTTGTATGTT+TGG | - | chr1.4:59724434-59724453 | MS.gene40023:intron | 30.0% | |
CTAGTACTATATACTAGTAG+TGG | - | chr1.4:59719540-59719559 | MS.gene40023:intron | 30.0% | |
CTTTAAGTATCAAAATGGAG+TGG | - | chr1.4:59720635-59720654 | MS.gene40023:intron | 30.0% | |
GAGAAATAGTTAGAGGAAAA+GGG | - | chr1.4:59721630-59721649 | MS.gene40023:intron | 30.0% | |
GTAACAAAGCATATTCTCTA+AGG | + | chr1.4:59722112-59722131 | None:intergenic | 30.0% | |
GTGAATATCTCTATTTCATG+TGG | - | chr1.4:59719214-59719233 | MS.gene40023:intron | 30.0% | |
TAAATATCTTGAGCCTAATC+AGG | - | chr1.4:59724896-59724915 | MS.gene40023:intron | 30.0% | |
TAAATCACCTATTATCTCTG+AGG | + | chr1.4:59723406-59723425 | None:intergenic | 30.0% | |
TAATCTGCAACAAATTGCTT+TGG | - | chr1.4:59720126-59720145 | MS.gene40023:intron | 30.0% | |
TATGCAAGATAACATCTTCA+TGG | - | chr1.4:59720261-59720280 | MS.gene40023:intron | 30.0% | |
TATTGTTACCATTACTTGAG+AGG | - | chr1.4:59722240-59722259 | MS.gene40023:CDS | 30.0% | |
TCACATAGATCAGATATATG+TGG | + | chr1.4:59720519-59720538 | None:intergenic | 30.0% | |
TCATGTTTGTATCAGACTTT+CGG | - | chr1.4:59718944-59718963 | MS.gene40023:intron | 30.0% | |
TCATTTATGATTGCCTTCTA+GGG | - | chr1.4:59719888-59719907 | MS.gene40023:intron | 30.0% | |
TCCACAGAATAAAAATGGAA+TGG | - | chr1.4:59720367-59720386 | MS.gene40023:intron | 30.0% | |
TCGATAAGTGAAATGAATGT+AGG | + | chr1.4:59719261-59719280 | None:intergenic | 30.0% | |
TGGATGCATAACAAAGAATA+TGG | - | chr1.4:59719447-59719466 | MS.gene40023:CDS | 30.0% | |
TGGGTAGATAATAGATATGT+GGG | - | chr1.4:59724223-59724242 | MS.gene40023:intron | 30.0% | |
TGTATATTTGTGATAGTCGT+GGG | - | chr1.4:59723907-59723926 | MS.gene40023:intron | 30.0% | |
TTAACTGGTCAAACTTCATA+TGG | + | chr1.4:59722684-59722703 | None:intergenic | 30.0% | |
TTAGTTGGATTGATGCTTAA+TGG | - | chr1.4:59723080-59723099 | MS.gene40023:intron | 30.0% | |
TTGGGTAGATAATAGATATG+TGG | - | chr1.4:59724222-59724241 | MS.gene40023:intron | 30.0% | |
TTGTGATTATGGGGAAAATA+GGG | - | chr1.4:59724750-59724769 | MS.gene40023:CDS | 30.0% | |
! | AACTAAATTTTCAATTGGGG+TGG | - | chr1.4:59718578-59718597 | MS.gene40023:intron | 30.0% |
! | AGTTATGTCTCTCATTTTGA+GGG | - | chr1.4:59719128-59719147 | MS.gene40023:intron | 30.0% |
! | ATTTTTCCACAGTAGAATCA+AGG | - | chr1.4:59718520-59718539 | MS.gene40023:intron | 30.0% |
! | CATCCATTGCATATCAATTT+TGG | - | chr1.4:59723566-59723585 | MS.gene40023:intron | 30.0% |
! | CATTTTCACTAACACATAAG+AGG | - | chr1.4:59718547-59718566 | MS.gene40023:intron | 30.0% |
! | CTGAGATGAGAATTTTATGT+TGG | - | chr1.4:59721489-59721508 | MS.gene40023:intron | 30.0% |
! | TGTTTTCTTCATGTACTAGT+TGG | - | chr1.4:59724099-59724118 | MS.gene40023:intron | 30.0% |
! | TTTTTGCAACTATCATTCAG+AGG | + | chr1.4:59723050-59723069 | None:intergenic | 30.0% |
!! | ACCATTCCATTTTTATTCTG+TGG | + | chr1.4:59720371-59720390 | None:intergenic | 30.0% |
!! | AGAATTTTAATGGACAGAGT+TGG | - | chr1.4:59719712-59719731 | MS.gene40023:intron | 30.0% |
!! | TTAGAAGTTTGTTATGCCAT+CGG | - | chr1.4:59719083-59719102 | MS.gene40023:intron | 30.0% |
!! | TTGTAAACTTTTGACTGCAT+AGG | + | chr1.4:59720778-59720797 | None:intergenic | 30.0% |
!!! | ACTTGCTATAATCCTCATTT+TGG | - | chr1.4:59722629-59722648 | MS.gene40023:intron | 30.0% |
!!! | ATTCTTTTTTGTCCCTTGAA+GGG | - | chr1.4:59719622-59719641 | MS.gene40023:intron | 30.0% |
AAAGAGAAACAATCCCAACA+AGG | + | chr1.4:59722832-59722851 | None:intergenic | 35.0% | |
AAATTGCCAACTTATTCACC+AGG | - | chr1.4:59720691-59720710 | MS.gene40023:intron | 35.0% | |
AAGAAGCAATCAATACGTTC+AGG | - | chr1.4:59723351-59723370 | MS.gene40023:intron | 35.0% | |
AAGTCATACATGTCTCTTCA+CGG | + | chr1.4:59719782-59719801 | None:intergenic | 35.0% | |
AATAGTGTGTTTCGATGACT+AGG | - | chr1.4:59722990-59723009 | MS.gene40023:intron | 35.0% | |
AATCATTCTTCAATCTGTCC+AGG | + | chr1.4:59720580-59720599 | None:intergenic | 35.0% | |
AATGGCTCATACTAGAGTAA+CGG | + | chr1.4:59721848-59721867 | None:intergenic | 35.0% | |
AATGGTTGAAAGCTTGACTT+TGG | - | chr1.4:59720385-59720404 | MS.gene40023:intron | 35.0% | |
ACCTGAAAAACAGAGATTGT+TGG | + | chr1.4:59718413-59718432 | None:intergenic | 35.0% | |
ACTATATACTAGTAGTGGCT+TGG | - | chr1.4:59719545-59719564 | MS.gene40023:intron | 35.0% | |
ACTGTAAAGTTGCATACAAC+TGG | - | chr1.4:59721460-59721479 | MS.gene40023:intron | 35.0% | |
AGAATCGCAAACTCTGTATT+GGG | - | chr1.4:59724204-59724223 | MS.gene40023:intron | 35.0% | |
AGACATATCTTACCAAAGCT+TGG | + | chr1.4:59723525-59723544 | None:intergenic | 35.0% | |
AGCAAGTAAGAATTATGGCT+TGG | + | chr1.4:59722616-59722635 | None:intergenic | 35.0% | |
AGCTCTCCACAGAATAAAAA+TGG | - | chr1.4:59720362-59720381 | MS.gene40023:intron | 35.0% | |
AGTAAGCAGTTATTGGGTAA+GGG | - | chr1.4:59724249-59724268 | MS.gene40023:intron | 35.0% | |
AGTAGTTTCACTTACATCAC+AGG | + | chr1.4:59724608-59724627 | None:intergenic | 35.0% | |
ATACGTGGAGAAATAGTTAG+AGG | - | chr1.4:59721623-59721642 | MS.gene40023:intron | 35.0% | |
ATACTTCTTTATGAACCTCG+TGG | - | chr1.4:59723168-59723187 | MS.gene40023:intron | 35.0% | |
ATAGTGTGTTTCGATGACTA+GGG | - | chr1.4:59722991-59723010 | MS.gene40023:intron | 35.0% | |
ATGCTTCTTTACTGTTTGTG+CGG | - | chr1.4:59718688-59718707 | MS.gene40023:intron | 35.0% | |
ATGGTTGAAAGCTTGACTTT+GGG | - | chr1.4:59720386-59720405 | MS.gene40023:intron | 35.0% | |
ATTTAGCCTGGTGAATAAGT+TGG | + | chr1.4:59720700-59720719 | None:intergenic | 35.0% | |
CAAACGGAACTTTATGATTC+AGG | - | chr1.4:59720724-59720743 | MS.gene40023:intron | 35.0% | |
CACTAGACCTTATCTACAAT+GGG | + | chr1.4:59719326-59719345 | None:intergenic | 35.0% | |
CAGCCAAAATTGATATGCAA+TGG | + | chr1.4:59723572-59723591 | None:intergenic | 35.0% | |
CATTGAGGGATACTTGTATT+GGG | - | chr1.4:59724155-59724174 | MS.gene40023:intron | 35.0% | |
CCTCTGTAATTTCCTTTAGA+AGG | + | chr1.4:59721978-59721997 | None:intergenic | 35.0% | |
CCTGAAAAACAGAGATTGTT+GGG | + | chr1.4:59718412-59718431 | None:intergenic | 35.0% | |
CTGAATCATAAAGTTCCGTT+TGG | + | chr1.4:59720726-59720745 | None:intergenic | 35.0% | |
CTTAATGGAGATGGGAATTT+GGG | - | chr1.4:59723095-59723114 | MS.gene40023:intron | 35.0% | |
GATATGAGCACAGAAAAGTT+GGG | - | chr1.4:59721185-59721204 | MS.gene40023:intron | 35.0% | |
GATTGATGCTTAATGGAGAT+GGG | - | chr1.4:59723087-59723106 | MS.gene40023:intron | 35.0% | |
GGAGAAATAGTTAGAGGAAA+AGG | - | chr1.4:59721629-59721648 | MS.gene40023:intron | 35.0% | |
GGAGACCATAGAAAAACTAT+AGG | - | chr1.4:59721651-59721670 | MS.gene40023:intron | 35.0% | |
GGGTAGATAATAGATATGTG+GGG | - | chr1.4:59724224-59724243 | MS.gene40023:intron | 35.0% | |
GTATATTTGTGATAGTCGTG+GGG | - | chr1.4:59723908-59723927 | MS.gene40023:intron | 35.0% | |
GTCAAACTTCATATGGTCAT+CGG | + | chr1.4:59722677-59722696 | None:intergenic | 35.0% | |
GTGCATTGAAAGATAACAAG+CGG | - | chr1.4:59724958-59724977 | MS.gene40023:CDS | 35.0% | |
GTGTATATTTGTGATAGTCG+TGG | - | chr1.4:59723906-59723925 | MS.gene40023:intron | 35.0% | |
TAAATCAGCAGAGTTAACAG+TGG | + | chr1.4:59722212-59722231 | None:intergenic | 35.0% | |
TAATTAGGCCTCTCAAGTAA+TGG | + | chr1.4:59722251-59722270 | None:intergenic | 35.0% | |
TACTTCTCCCATTGTAGATA+AGG | - | chr1.4:59719316-59719335 | MS.gene40023:intron | 35.0% | |
TAGATCAGATATATGTGGTG+TGG | + | chr1.4:59720514-59720533 | None:intergenic | 35.0% | |
TAGCACTTGTGATCCATAAA+AGG | + | chr1.4:59723685-59723704 | None:intergenic | 35.0% | |
TAGTAAGCAGTTATTGGGTA+AGG | - | chr1.4:59724248-59724267 | MS.gene40023:intron | 35.0% | |
TAGTCAGAATGATGAAGAAG+GGG | + | chr1.4:59718450-59718469 | None:intergenic | 35.0% | |
TATCTGTTAGAACTTGAAGC+TGG | + | chr1.4:59723856-59723875 | None:intergenic | 35.0% | |
TCAAACTTCATATGGTCATC+GGG | + | chr1.4:59722676-59722695 | None:intergenic | 35.0% | |
TCCATAAAAGGTGAGAATAC+TGG | + | chr1.4:59723673-59723692 | None:intergenic | 35.0% | |
TCTAGTATGAGCCATTTATG+AGG | - | chr1.4:59721852-59721871 | MS.gene40023:intron | 35.0% | |
TCTGATACAAACATGAACAC+CGG | + | chr1.4:59718940-59718959 | None:intergenic | 35.0% | |
TGAAAACCTTGATTCTACTG+TGG | + | chr1.4:59718529-59718548 | None:intergenic | 35.0% | |
TGAAATGACAACAAGTCCAT+CGG | + | chr1.4:59721099-59721118 | None:intergenic | 35.0% | |
TGACTGAATTTAATACCACG+AGG | + | chr1.4:59723186-59723205 | None:intergenic | 35.0% | |
TGAGAAGTTCAGAAGTTTGA+GGG | - | chr1.4:59720896-59720915 | MS.gene40023:CDS | 35.0% | |
TGATATGAGCACAGAAAAGT+TGG | - | chr1.4:59721184-59721203 | MS.gene40023:intron | 35.0% | |
TGATTAAGTAACTAGACCGA+TGG | + | chr1.4:59719102-59719121 | None:intergenic | 35.0% | |
TGCATTGAAAGATAACAAGC+GGG | - | chr1.4:59724959-59724978 | MS.gene40023:CDS | 35.0% | |
TGGAGTCTCGACATAATAAT+GGG | - | chr1.4:59720427-59720446 | MS.gene40023:intron | 35.0% | |
TTCGCAAAAATAGGATTTGC+AGG | - | chr1.4:59724123-59724142 | MS.gene40023:intron | 35.0% | |
TTCTGTGCTCATATCATCAA+TGG | + | chr1.4:59721180-59721199 | None:intergenic | 35.0% | |
TTGCAACATCTCAACTATTG+AGG | + | chr1.4:59724554-59724573 | None:intergenic | 35.0% | |
TTGCTTGATGAGGAGTAAAA+TGG | - | chr1.4:59719960-59719979 | MS.gene40023:intron | 35.0% | |
TTTACAAATTGGAACTCGGA+AGG | + | chr1.4:59724854-59724873 | None:intergenic | 35.0% | |
! | AAATTTTGTTGAAGGCAGTC+TGG | - | chr1.4:59721008-59721027 | MS.gene40023:intron | 35.0% |
! | ACAACTTACGAGATGCATTT+TGG | + | chr1.4:59722488-59722507 | None:intergenic | 35.0% |
! | ACCAGTATTCTCACCTTTTA+TGG | - | chr1.4:59723669-59723688 | MS.gene40023:CDS | 35.0% |
! | ACTCTTGCATTTTCCTTTCA+TGG | - | chr1.4:59719427-59719446 | MS.gene40023:CDS | 35.0% |
! | CAGTTATGTCTCTCATTTTG+AGG | - | chr1.4:59719127-59719146 | MS.gene40023:intron | 35.0% |
! | CCTTCTAAAGGAAATTACAG+AGG | - | chr1.4:59721975-59721994 | MS.gene40023:intron | 35.0% |
! | CTAGTTGGTTTCGCAAAAAT+AGG | - | chr1.4:59724114-59724133 | MS.gene40023:intron | 35.0% |
! | CTTGTTATCTTTCAATGCAC+CGG | + | chr1.4:59724958-59724977 | None:intergenic | 35.0% |
! | CTTTGTTATGCATCCATGAA+AGG | + | chr1.4:59719443-59719462 | None:intergenic | 35.0% |
! | GAAGCTTATATTTGTTGCAG+TGG | - | chr1.4:59723470-59723489 | MS.gene40023:intron | 35.0% |
! | GAGAATATGCTTTGTTACCT+AGG | - | chr1.4:59722114-59722133 | MS.gene40023:intron | 35.0% |
! | GGAATTTGGGTTAGATTATG+TGG | - | chr1.4:59718817-59718836 | MS.gene40023:intron | 35.0% |
! | GTAATTTCCTTTAGAAGGTC+AGG | + | chr1.4:59721973-59721992 | None:intergenic | 35.0% |
! | GTTATGTCTCTCATTTTGAG+GGG | - | chr1.4:59719129-59719148 | MS.gene40023:intron | 35.0% |
! | TTAATGGACAGAGTTGGTTT+AGG | - | chr1.4:59719718-59719737 | MS.gene40023:intron | 35.0% |
! | TTCGGCCTATAGTTTTTCTA+TGG | + | chr1.4:59721659-59721678 | None:intergenic | 35.0% |
! | TTTTGGACCTCAGAGATAAT+AGG | - | chr1.4:59723396-59723415 | MS.gene40023:intron | 35.0% |
!! | AAAAGGTGTTTCTGACTGTA+TGG | + | chr1.4:59723709-59723728 | None:intergenic | 35.0% |
!! | ACGTTTGTTTTCCTCAAAGT+TGG | - | chr1.4:59718616-59718635 | MS.gene40023:intron | 35.0% |
!! | AGGCTCTAAAAATCTAGTGA+AGG | + | chr1.4:59720877-59720896 | None:intergenic | 35.0% |
!! | ATATCAGATAGTTCTGGTTC+TGG | + | chr1.4:59720078-59720097 | None:intergenic | 35.0% |
!! | CATTGCATATCAATTTTGGC+TGG | - | chr1.4:59723570-59723589 | MS.gene40023:intron | 35.0% |
!! | CTATCAATTAGGTTGGACAA+AGG | - | chr1.4:59723876-59723895 | MS.gene40023:intron | 35.0% |
!! | GGCTCTAAAAATCTAGTGAA+GGG | + | chr1.4:59720876-59720895 | None:intergenic | 35.0% |
!! | GTTGTTTTCAGATAGAAGTG+TGG | - | chr1.4:59720153-59720172 | MS.gene40023:intron | 35.0% |
!! | TATTGATTCGAAAGCACAAG+TGG | + | chr1.4:59721262-59721281 | None:intergenic | 35.0% |
!!! | GATTCTTTTTTGTCCCTTGA+AGG | - | chr1.4:59719621-59719640 | MS.gene40023:intron | 35.0% |
!!! | TTCTTTTTTGTCCCTTGAAG+GGG | - | chr1.4:59719623-59719642 | MS.gene40023:intron | 35.0% |
AAAACACCAGCTCTATATGC+AGG | + | chr1.4:59721137-59721156 | None:intergenic | 40.0% | |
AAAAGGTGAGAATACTGGTG+TGG | + | chr1.4:59723668-59723687 | None:intergenic | 40.0% | |
AAGAAAGATGCTTGCCACAT+TGG | - | chr1.4:59720845-59720864 | MS.gene40023:intron | 40.0% | |
ACCAGGCTAAATTGTCCAAA+CGG | - | chr1.4:59720708-59720727 | MS.gene40023:intron | 40.0% | |
AGAGTCAAGAGGACAGAAAA+AGG | + | chr1.4:59720238-59720257 | None:intergenic | 40.0% | |
AGATTGTTGGGTAACGAAGA+GGG | + | chr1.4:59718400-59718419 | None:intergenic | 40.0% | |
AGGGATACTTGTATTGGGTT+TGG | - | chr1.4:59724160-59724179 | MS.gene40023:intron | 40.0% | |
ATAAATCAGCGAGAATGACC+TGG | - | chr1.4:59720559-59720578 | MS.gene40023:intron | 40.0% | |
CAAAAGGAGGAAATGGAACA+GGG | - | chr1.4:59718650-59718669 | MS.gene40023:intron | 40.0% | |
CAAGATAACATCTTCATGGG+TGG | - | chr1.4:59720265-59720284 | MS.gene40023:intron | 40.0% | |
CCAATATGCATTACACAGTC+AGG | + | chr1.4:59720972-59720991 | None:intergenic | 40.0% | |
CCTGACTGTGTAATGCATAT+TGG | - | chr1.4:59720969-59720988 | MS.gene40023:CDS | 40.0% | |
CGAGATATACTGGATACAGA+TGG | - | chr1.4:59723933-59723952 | MS.gene40023:intron | 40.0% | |
CTCAAACTTCTGAACTTCTC+AGG | + | chr1.4:59720897-59720916 | None:intergenic | 40.0% | |
CTGAGAAGTTCAGAAGTTTG+AGG | - | chr1.4:59720895-59720914 | MS.gene40023:CDS | 40.0% | |
CTGGAGTCTCGACATAATAA+TGG | - | chr1.4:59720426-59720445 | MS.gene40023:intron | 40.0% | |
GAAGAAGGGGAAATTGAGAA+GGG | + | chr1.4:59718437-59718456 | None:intergenic | 40.0% | |
GAATTGAGATTGCCAAGCTT+TGG | - | chr1.4:59723510-59723529 | MS.gene40023:intron | 40.0% | |
GAGAATCGCAAACTCTGTAT+TGG | - | chr1.4:59724203-59724222 | MS.gene40023:intron | 40.0% | |
GAGAGCCAACATTTGGAAAA+GGG | - | chr1.4:59724994-59725013 | MS.gene40023:CDS | 40.0% | |
GAGCCTAATCAGGTAAACAA+GGG | - | chr1.4:59724906-59724925 | MS.gene40023:intron | 40.0% | |
GATGAAGAAAAACCCACTGT+AGG | + | chr1.4:59721232-59721251 | None:intergenic | 40.0% | |
GCACTAGACCTTATCTACAA+TGG | + | chr1.4:59719327-59719346 | None:intergenic | 40.0% | |
GCATTGAGGGATACTTGTAT+TGG | - | chr1.4:59724154-59724173 | MS.gene40023:intron | 40.0% | |
GCTGCATTTGTTCTCAGATA+TGG | - | chr1.4:59720818-59720837 | MS.gene40023:intron | 40.0% | |
GCTTAATGGAGATGGGAATT+TGG | - | chr1.4:59723094-59723113 | MS.gene40023:intron | 40.0% | |
GGATTGATGCTTAATGGAGA+TGG | - | chr1.4:59723086-59723105 | MS.gene40023:intron | 40.0% | |
GGCGCAATAATACTTTGTCT+TGG | + | chr1.4:59721729-59721748 | None:intergenic | 40.0% | |
GGGATACTTGTATTGGGTTT+GGG | - | chr1.4:59724161-59724180 | MS.gene40023:intron | 40.0% | |
GGGGATAGTAAGCAGTTATT+GGG | - | chr1.4:59724243-59724262 | MS.gene40023:intron | 40.0% | |
GTAAGCAGTTATTGGGTAAG+GGG | - | chr1.4:59724250-59724269 | MS.gene40023:intron | 40.0% | |
GTCTGTGTAAGTGTTATGTC+CGG | - | chr1.4:59718918-59718937 | MS.gene40023:intron | 40.0% | |
TACCAACTTACGTTAGAGCT+AGG | + | chr1.4:59722055-59722074 | None:intergenic | 40.0% | |
TAGAACTTGAAGCTGGACAA+AGG | + | chr1.4:59723849-59723868 | None:intergenic | 40.0% | |
TAGGTCCCTCACTTGAAAAA+GGG | + | chr1.4:59719242-59719261 | None:intergenic | 40.0% | |
TATGACACCAATGCAATGAG+AGG | + | chr1.4:59724022-59724041 | None:intergenic | 40.0% | |
TGAAGAAGGGGAAATTGAGA+AGG | + | chr1.4:59718438-59718457 | None:intergenic | 40.0% | |
TGAGCCTAATCAGGTAAACA+AGG | - | chr1.4:59724905-59724924 | MS.gene40023:intron | 40.0% | |
TGGCAATCTCAATTCCTTCT+GGG | + | chr1.4:59723505-59723524 | None:intergenic | 40.0% | |
TGGGGATAGTAAGCAGTTAT+TGG | - | chr1.4:59724242-59724261 | MS.gene40023:intron | 40.0% | |
TGTTTACCAGACACACCTTT+CGG | - | chr1.4:59724705-59724724 | MS.gene40023:CDS | 40.0% | |
TGTTTCATGCTTGCTTGATG+AGG | - | chr1.4:59719950-59719969 | MS.gene40023:intron | 40.0% | |
TTCTTTACTGTTTGTGCGGT+TGG | - | chr1.4:59718692-59718711 | MS.gene40023:intron | 40.0% | |
TTGACACTCACTCACTCTAT+GGG | - | chr1.4:59719181-59719200 | MS.gene40023:intron | 40.0% | |
TTGATTGCCTGACCTTCTAA+AGG | - | chr1.4:59721963-59721982 | MS.gene40023:intron | 40.0% | |
TTGGCAATCTCAATTCCTTC+TGG | + | chr1.4:59723506-59723525 | None:intergenic | 40.0% | |
TTTGTCTGGAGATGTTATCC+TGG | - | chr1.4:59721154-59721173 | MS.gene40023:intron | 40.0% | |
! | GAATTATGGCTTGGAGTACT+AGG | + | chr1.4:59722607-59722626 | None:intergenic | 40.0% |
! | GCAAGTTTTTGCATCATCCT+AGG | + | chr1.4:59722134-59722153 | None:intergenic | 40.0% |
! | GCTTATATTTGTTGCAGTGG+TGG | - | chr1.4:59723473-59723492 | MS.gene40023:intron | 40.0% |
! | GTTCCCTTGTTTACCTGATT+AGG | + | chr1.4:59724912-59724931 | None:intergenic | 40.0% |
! | TATAGAGCTGGTGTTTTGTC+TGG | - | chr1.4:59721140-59721159 | MS.gene40023:intron | 40.0% |
! | TATCAAAGTGTTCTTCCACC+AGG | + | chr1.4:59721776-59721795 | None:intergenic | 40.0% |
! | TCAGTTGGTTCAAACATACG+TGG | - | chr1.4:59721608-59721627 | MS.gene40023:intron | 40.0% |
! | TGACTGGAGGAGTTCATTTT+CGG | + | chr1.4:59723791-59723810 | None:intergenic | 40.0% |
! | TGGAGTTATGTTGGTTGTCT+CGG | - | chr1.4:59718719-59718738 | MS.gene40023:intron | 40.0% |
! | TTTTCTGTCCTCTTGACTCT+TGG | - | chr1.4:59720238-59720257 | MS.gene40023:intron | 40.0% |
!! | AAGAGTTCTATTGACTCCTG+TGG | - | chr1.4:59724278-59724297 | MS.gene40023:intron | 40.0% |
!! | AGAGTTCTATTGACTCCTGT+GGG | - | chr1.4:59724279-59724298 | MS.gene40023:intron | 40.0% |
!! | ATTGGTGTCATATATCGCGT+CGG | - | chr1.4:59724030-59724049 | MS.gene40023:intron | 40.0% |
!! | CCCAACAATCTCTGTTTTTC+AGG | - | chr1.4:59718409-59718428 | MS.gene40023:CDS | 40.0% |
!!! | ATGGGTGGTGGTTTTAAACA+TGG | - | chr1.4:59720280-59720299 | MS.gene40023:intron | 40.0% |
!!! | GCATATCAATTTTGGCTGGT+GGG | - | chr1.4:59723574-59723593 | MS.gene40023:intron | 40.0% |
!!! | TGCATATCAATTTTGGCTGG+TGG | - | chr1.4:59723573-59723592 | MS.gene40023:intron | 40.0% |
AAAATTACCAGCACAGCCAG+AGG | + | chr1.4:59723984-59724003 | None:intergenic | 45.0% | |
AACAAGCGGGCCATATTGTA+CGG | - | chr1.4:59724972-59724991 | MS.gene40023:CDS | 45.0% | |
AATGCAACAGAGCTTCCATC+AGG | + | chr1.4:59722002-59722021 | None:intergenic | 45.0% | |
ACAATGGGAGAAGTAGTGCT+AGG | + | chr1.4:59719311-59719330 | None:intergenic | 45.0% | |
ACTGGAGTGGGGATATCAAT+AGG | - | chr1.4:59721047-59721066 | MS.gene40023:intron | 45.0% | |
AGAAACAATCCCAACAAGGC+AGG | + | chr1.4:59722828-59722847 | None:intergenic | 45.0% | |
AGAGAATCTCCTCTTTCTGG+AGG | - | chr1.4:59719656-59719675 | MS.gene40023:intron | 45.0% | |
AGTGAAGGGATCATCCAATG+TGG | + | chr1.4:59720862-59720881 | None:intergenic | 45.0% | |
AGTGCCAGCGAAATATTAGC+CGG | - | chr1.4:59724936-59724955 | MS.gene40023:intron | 45.0% | |
ATGACAACAAGTCCATCGGA+TGG | + | chr1.4:59721095-59721114 | None:intergenic | 45.0% | |
ATGGCATGTCTGCTTTGGTA+GGG | + | chr1.4:59721076-59721095 | None:intergenic | 45.0% | |
CAATGGGAGAAGTAGTGCTA+GGG | + | chr1.4:59719310-59719329 | None:intergenic | 45.0% | |
CAGAGGTTCAGAAGTTGCTA+GGG | + | chr1.4:59723967-59723986 | None:intergenic | 45.0% | |
CATAGAGTGAGTGAGTGTCA+AGG | + | chr1.4:59719182-59719201 | None:intergenic | 45.0% | |
CCTGCAAGGATGACAGATTA+CGG | + | chr1.4:59723323-59723342 | None:intergenic | 45.0% | |
CGAAGGAAACTCCAACTTTG+AGG | + | chr1.4:59718630-59718649 | None:intergenic | 45.0% | |
CTTGACACTCACTCACTCTA+TGG | - | chr1.4:59719180-59719199 | MS.gene40023:intron | 45.0% | |
CTTGCATACCAAGAGTCAAG+AGG | + | chr1.4:59720249-59720268 | None:intergenic | 45.0% | |
GAAACAATCCCAACAAGGCA+GGG | + | chr1.4:59722827-59722846 | None:intergenic | 45.0% | |
GAGATTGTTGGGTAACGAAG+AGG | + | chr1.4:59718401-59718420 | None:intergenic | 45.0% | |
GATAACATCTTCATGGGTGG+TGG | - | chr1.4:59720268-59720287 | MS.gene40023:intron | 45.0% | |
GCAAAAGGAGGAAATGGAAC+AGG | - | chr1.4:59718649-59718668 | MS.gene40023:intron | 45.0% | |
GCTTTCTCCTCTCATTGCAT+TGG | - | chr1.4:59724012-59724031 | MS.gene40023:intron | 45.0% | |
GGAAATTACAGAGGACCTGA+TGG | - | chr1.4:59721984-59722003 | MS.gene40023:intron | 45.0% | |
GGAAGAGAATCTCCTCTTTC+TGG | - | chr1.4:59719653-59719672 | MS.gene40023:intron | 45.0% | |
GGAGAGCCAACATTTGGAAA+AGG | - | chr1.4:59724993-59725012 | MS.gene40023:CDS | 45.0% | |
GGAGATAATTCCCCAACAGT+TGG | - | chr1.4:59722438-59722457 | MS.gene40023:intron | 45.0% | |
GTAGGTCCCTCACTTGAAAA+AGG | + | chr1.4:59719243-59719262 | None:intergenic | 45.0% | |
GTCTCTTCACGGTTGTTCAT+GGG | + | chr1.4:59719771-59719790 | None:intergenic | 45.0% | |
GTGAGTGTCAAGGTGAATGT+TGG | + | chr1.4:59719172-59719191 | None:intergenic | 45.0% | |
GTTGGAGTTTCCTTCGCAAA+AGG | - | chr1.4:59718634-59718653 | MS.gene40023:intron | 45.0% | |
GTTGGTTGCTGGAGTTATGT+TGG | - | chr1.4:59718710-59718729 | MS.gene40023:intron | 45.0% | |
TAACTGCTTACTATCCCCAC+AGG | + | chr1.4:59724241-59724260 | None:intergenic | 45.0% | |
TACGTCAGAACCACTACGTA+TGG | + | chr1.4:59722027-59722046 | None:intergenic | 45.0% | |
TCCGTTTGGACAATTTAGCC+TGG | + | chr1.4:59720712-59720731 | None:intergenic | 45.0% | |
TCCTTCGCAAAAGGAGGAAA+TGG | - | chr1.4:59718643-59718662 | MS.gene40023:intron | 45.0% | |
TGCTCATATCATCAATGGCC+AGG | + | chr1.4:59721175-59721194 | None:intergenic | 45.0% | |
TGTCTCTTCACGGTTGTTCA+TGG | + | chr1.4:59719772-59719791 | None:intergenic | 45.0% | |
TTCGATGACTAGGGTTGTAG+TGG | - | chr1.4:59723000-59723019 | MS.gene40023:intron | 45.0% | |
TTGCACAGTCTTGACTTCAC+TGG | + | chr1.4:59722405-59722424 | None:intergenic | 45.0% | |
TTGTACGGAGAGCCAACATT+TGG | - | chr1.4:59724987-59725006 | MS.gene40023:CDS | 45.0% | |
TTGTGCTGCAGGTTTCAAAC+TGG | - | chr1.4:59718493-59718512 | MS.gene40023:intron | 45.0% | |
! | ACGCCTTCGATTTGAAGTGT+CGG | + | chr1.4:59718845-59718864 | None:intergenic | 45.0% |
! | CTTCTTTGATAGCACCTGCA+AGG | + | chr1.4:59723337-59723356 | None:intergenic | 45.0% |
! | GTTGCATTGACCATACGTAG+TGG | - | chr1.4:59722014-59722033 | MS.gene40023:intron | 45.0% |
! | GTTGTCATTTCAGCTTCTCC+AGG | - | chr1.4:59721107-59721126 | MS.gene40023:intron | 45.0% |
! | TCCATTTCCTCCTTTTGCGA+AGG | + | chr1.4:59718647-59718666 | None:intergenic | 45.0% |
! | TGAAGGCAGTCTGGAACTAA+AGG | - | chr1.4:59721017-59721036 | MS.gene40023:intron | 45.0% |
! | TGATTGCCTTCTAGGGATTG+AGG | - | chr1.4:59719895-59719914 | MS.gene40023:intron | 45.0% |
!! | CACCTAGCTCTAACGTAAGT+TGG | - | chr1.4:59722050-59722069 | MS.gene40023:intron | 45.0% |
!! | GAGTTCTATTGACTCCTGTG+GGG | - | chr1.4:59724280-59724299 | MS.gene40023:intron | 45.0% |
!! | GCTGAGGTTGTTGACTTTAG+AGG | - | chr1.4:59719505-59719524 | MS.gene40023:intron | 45.0% |
!! | GCTTGACTTTGGGTTGTCAT+CGG | - | chr1.4:59720396-59720415 | MS.gene40023:intron | 45.0% |
!! | TGTTGGCTCTCCGTACAATA+TGG | + | chr1.4:59724985-59725004 | None:intergenic | 45.0% |
!! | TTGGTGTCATATATCGCGTC+GGG | - | chr1.4:59724031-59724050 | MS.gene40023:intron | 45.0% |
!!! | TGGGACCCTTTTTCAAGTGA+GGG | - | chr1.4:59719234-59719253 | MS.gene40023:intron | 45.0% |
AAAGCAGACATGCCATCCGA+TGG | - | chr1.4:59721080-59721099 | MS.gene40023:intron | 50.0% | |
ACACTCACTCACTCTATGGG+TGG | - | chr1.4:59719184-59719203 | MS.gene40023:intron | 50.0% | |
AGAGGAGATTCTCTTCCGTC+AGG | + | chr1.4:59719650-59719669 | None:intergenic | 50.0% | |
AGCGCGCTCAATAGTTAGTG+TGG | + | chr1.4:59722793-59722812 | None:intergenic | 50.0% | |
AGGAACCTGCTTACTGCAGA+CGG | - | chr1.4:59722858-59722877 | MS.gene40023:intron | 50.0% | |
AGGTAGAGTCTCGTCTCAGT+TGG | - | chr1.4:59721593-59721612 | MS.gene40023:intron | 50.0% | |
ATCGGATGGCATGTCTGCTT+TGG | + | chr1.4:59721081-59721100 | None:intergenic | 50.0% | |
ATGTAGTCAATACCGCCTGG+TGG | - | chr1.4:59721758-59721777 | MS.gene40023:intron | 50.0% | |
CCAGAGGTTCAGAAGTTGCT+AGG | + | chr1.4:59723968-59723987 | None:intergenic | 50.0% | |
CCGTAATCTGTCATCCTTGC+AGG | - | chr1.4:59723320-59723339 | MS.gene40023:intron | 50.0% | |
CCTAGCAACTTCTGAACCTC+TGG | - | chr1.4:59723965-59723984 | MS.gene40023:intron | 50.0% | |
CTTACTGCAGACGGGCATTT+GGG | - | chr1.4:59722867-59722886 | MS.gene40023:intron | 50.0% | |
GAGGAGATTCTCTTCCGTCA+GGG | + | chr1.4:59719649-59719668 | None:intergenic | 50.0% | |
GATGGCATGTCTGCTTTGGT+AGG | + | chr1.4:59721077-59721096 | None:intergenic | 50.0% | |
GATTCATGGACCTGACCGAA+AGG | + | chr1.4:59724723-59724742 | None:intergenic | 50.0% | |
GCAGGACATGCATGCATTGA+GGG | - | chr1.4:59724141-59724160 | MS.gene40023:intron | 50.0% | |
GCAGTCCAGCAAAAACTCGA+GGG | - | chr1.4:59724678-59724697 | MS.gene40023:CDS | 50.0% | |
GGAGTTTCCTTCGCAAAAGG+AGG | - | chr1.4:59718637-59718656 | MS.gene40023:intron | 50.0% | |
GGGTAACGAAGAGGGAAAGA+AGG | + | chr1.4:59718392-59718411 | None:intergenic | 50.0% | |
GGTTGTCATCGGTGATTGTC+TGG | - | chr1.4:59720407-59720426 | MS.gene40023:intron | 50.0% | |
GTCATTTCAGCTTCTCCAGG+AGG | - | chr1.4:59721110-59721129 | MS.gene40023:intron | 50.0% | |
GTTATCTACGGTACCGCTGT+GGG | + | chr1.4:59724366-59724385 | None:intergenic | 50.0% | |
TCCACTCCTCAATCCCTAGA+AGG | + | chr1.4:59719904-59719923 | None:intergenic | 50.0% | |
TCCATGTAGTCAATACCGCC+TGG | - | chr1.4:59721755-59721774 | MS.gene40023:intron | 50.0% | |
TCGTGGGGTTCGAGATATAC+TGG | - | chr1.4:59723923-59723942 | MS.gene40023:intron | 50.0% | |
TGCAGGACATGCATGCATTG+AGG | - | chr1.4:59724140-59724159 | MS.gene40023:intron | 50.0% | |
TGCAGTCCAGCAAAAACTCG+AGG | - | chr1.4:59724677-59724696 | MS.gene40023:CDS | 50.0% | |
TGTTATCTACGGTACCGCTG+TGG | + | chr1.4:59724367-59724386 | None:intergenic | 50.0% | |
TTCTCCATGCCTCCAGAAAG+AGG | + | chr1.4:59719668-59719687 | None:intergenic | 50.0% | |
TTGGGTTTGGGCAGTTCGTA+CGG | - | chr1.4:59724173-59724192 | MS.gene40023:intron | 50.0% | |
! | AACCACCCTCGAGTTTTTGC+TGG | + | chr1.4:59724686-59724705 | None:intergenic | 50.0% |
! | AGTGGTGGTCTTTTCCCAGA+AGG | - | chr1.4:59723488-59723507 | MS.gene40023:intron | 50.0% |
! | ATCTCCTCTTTCTGGAGGCA+TGG | - | chr1.4:59719661-59719680 | MS.gene40023:intron | 50.0% |
! | CAAAGTGTTCTTCCACCAGG+CGG | + | chr1.4:59721773-59721792 | None:intergenic | 50.0% |
! | CATGACTTCCCTGCCTTGTT+GGG | - | chr1.4:59722816-59722835 | MS.gene40023:intron | 50.0% |
! | CGAAAGCACAAGTGGCATGT+AGG | + | chr1.4:59721254-59721273 | None:intergenic | 50.0% |
! | CTTTTCCTGTGATCCCACAG+CGG | - | chr1.4:59724350-59724369 | MS.gene40023:intron | 50.0% |
! | GCACCGACACTTCAAATCGA+AGG | - | chr1.4:59718839-59718858 | MS.gene40023:intron | 50.0% |
!! | AAAGGCGCTCTAACTGGAGT+GGG | - | chr1.4:59721035-59721054 | MS.gene40023:intron | 50.0% |
!! | ACCAGGCGGTATTGACTACA+TGG | + | chr1.4:59721759-59721778 | None:intergenic | 50.0% |
!! | GGAACTAAAGGCGCTCTAAC+TGG | - | chr1.4:59721029-59721048 | MS.gene40023:intron | 50.0% |
!! | TAAAGGCGCTCTAACTGGAG+TGG | - | chr1.4:59721034-59721053 | MS.gene40023:intron | 50.0% |
!! | TGCACCGGCTAATATTTCGC+TGG | + | chr1.4:59724943-59724962 | None:intergenic | 50.0% |
!!! | GTGGGACCCTTTTTCAAGTG+AGG | - | chr1.4:59719233-59719252 | MS.gene40023:intron | 50.0% |
AATGCCCGTCTGCAGTAAGC+AGG | + | chr1.4:59722866-59722885 | None:intergenic | 55.0% | |
ACCAGACACACCTTTCGGTC+AGG | - | chr1.4:59724710-59724729 | MS.gene40023:CDS | 55.0% | |
ATGCAGCTGAACGCCTACAG+TGG | - | chr1.4:59721216-59721235 | MS.gene40023:intron | 55.0% | |
CTGTGCAAGTTACCTGCTGC+AGG | - | chr1.4:59722417-59722436 | MS.gene40023:intron | 55.0% | |
GCATGACTTCCCTGCCTTGT+TGG | - | chr1.4:59722815-59722834 | MS.gene40023:intron | 55.0% | |
GCTCTATATGCAGGACCTCC+TGG | + | chr1.4:59721128-59721147 | None:intergenic | 55.0% | |
GCTTACTGCAGACGGGCATT+TGG | - | chr1.4:59722866-59722885 | MS.gene40023:intron | 55.0% | |
GGAACCTGCTTACTGCAGAC+GGG | - | chr1.4:59722859-59722878 | MS.gene40023:intron | 55.0% | |
GGAGGTCCTGCATATAGAGC+TGG | - | chr1.4:59721128-59721147 | MS.gene40023:intron | 55.0% | |
GGGGAATTATCTCCTGCAGC+AGG | + | chr1.4:59722432-59722451 | None:intergenic | 55.0% | |
GTCCAGCAAAAACTCGAGGG+TGG | - | chr1.4:59724681-59724700 | MS.gene40023:CDS | 55.0% | |
TGCAGCTGAACGCCTACAGT+GGG | - | chr1.4:59721217-59721236 | MS.gene40023:intron | 55.0% | |
TGGGTTTGGGCAGTTCGTAC+GGG | - | chr1.4:59724174-59724193 | MS.gene40023:intron | 55.0% | |
TTCTGAACCTCTGGCTGTGC+TGG | - | chr1.4:59723974-59723993 | MS.gene40023:intron | 55.0% | |
! | AAGGCGCTCTAACTGGAGTG+GGG | - | chr1.4:59721036-59721055 | MS.gene40023:intron | 55.0% |
! | ACCTGACCGAAAGGTGTGTC+TGG | + | chr1.4:59724714-59724733 | None:intergenic | 55.0% |
! | CTGTTTGTGCGGTTGGTTGC+TGG | - | chr1.4:59718699-59718718 | MS.gene40023:intron | 55.0% |
! | GCCTTCTAGGGATTGAGGAG+TGG | - | chr1.4:59719900-59719919 | MS.gene40023:intron | 55.0% |
TTCCGTCAGGGCCCCTTCAA+GGG | + | chr1.4:59719637-59719656 | None:intergenic | 60.0% | |
CGGTACCGCTGTGGGATCAC+AGG | + | chr1.4:59724358-59724377 | None:intergenic | 65.0% | |
CTTCCGTCAGGGCCCCTTCA+AGG | + | chr1.4:59719638-59719657 | None:intergenic | 65.0% | |
GTCCCTTGAAGGGGCCCTGA+CGG | - | chr1.4:59719632-59719651 | MS.gene40023:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 59718359 | 59725019 | 59718359 | ID=MS.gene40023 |
chr1.4 | mRNA | 59718359 | 59725019 | 59718359 | ID=MS.gene40023.t1;Parent=MS.gene40023 |
chr1.4 | exon | 59724948 | 59725019 | 59724948 | ID=MS.gene40023.t1.exon1;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59724948 | 59725019 | 59724948 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59724610 | 59724874 | 59724610 | ID=MS.gene40023.t1.exon2;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59724610 | 59724874 | 59724610 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59723586 | 59723735 | 59723586 | ID=MS.gene40023.t1.exon3;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59723586 | 59723735 | 59723586 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59722461 | 59722543 | 59722461 | ID=MS.gene40023.t1.exon4;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59722461 | 59722543 | 59722461 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59722144 | 59722352 | 59722144 | ID=MS.gene40023.t1.exon5;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59722144 | 59722352 | 59722144 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59721315 | 59721383 | 59721315 | ID=MS.gene40023.t1.exon6;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59721315 | 59721383 | 59721315 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59720880 | 59720998 | 59720880 | ID=MS.gene40023.t1.exon7;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59720880 | 59720998 | 59720880 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59719961 | 59720036 | 59719961 | ID=MS.gene40023.t1.exon8;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59719961 | 59720036 | 59719961 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59719847 | 59719888 | 59719847 | ID=MS.gene40023.t1.exon9;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59719847 | 59719888 | 59719847 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59719383 | 59719491 | 59719383 | ID=MS.gene40023.t1.exon10;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59719383 | 59719491 | 59719383 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
chr1.4 | exon | 59718359 | 59718460 | 59718359 | ID=MS.gene40023.t1.exon11;Parent=MS.gene40023.t1 |
chr1.4 | CDS | 59718359 | 59718460 | 59718359 | ID=cds.MS.gene40023.t1;Parent=MS.gene40023.t1 |
Gene Sequence |
Protein sequence |