Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09953.t1 | AES94229.2 | 96.7 | 451 | 15 | 0 | 1 | 451 | 1 | 451 | 1.70E-261 | 911.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09953.t1 | Q94BV5 | 62.3 | 454 | 160 | 5 | 2 | 449 | 3 | 451 | 5.5e-168 | 592.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09953.t1 | G7JVZ6 | 96.7 | 451 | 15 | 0 | 1 | 451 | 1 | 451 | 1.2e-261 | 911.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene09953 | 0.802191 | 6.31E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene09953 | 0.812681 | 3.75E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene09953 | 0.889714 | 1.89E-73 | -1.69E-46 |
| MS.gene049369 | MS.gene09953 | 0.842552 | 2.41E-58 | -1.69E-46 |
| MS.gene049396 | MS.gene09953 | 0.807478 | 4.96E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene09953 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene09953 | 0.830579 | 2.71E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene09953 | 0.818763 | 1.65E-52 | -1.69E-46 |
| MS.gene049907 | MS.gene09953 | 0.805124 | 1.55E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene09953 | 0.818066 | 2.38E-52 | -1.69E-46 |
| MS.gene050520 | MS.gene09953 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene09953 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene09953 | 0.841423 | 4.80E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene09953 | 0.885905 | 5.43E-72 | -1.69E-46 |
| MS.gene050747 | MS.gene09953 | 0.828941 | 6.80E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene09953 | 0.80939 | 1.94E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene09953 | 0.803726 | 3.04E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene09953 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene09953 | 0.821692 | 3.53E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene09953 | 0.888024 | 8.52E-73 | -1.69E-46 |
| MS.gene051360 | MS.gene09953 | 0.875132 | 3.92E-68 | -1.69E-46 |
| MS.gene051387 | MS.gene09953 | 0.856256 | 3.64E-62 | -1.69E-46 |
| MS.gene051525 | MS.gene09953 | 0.836054 | 1.17E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene09953 | 0.815565 | 8.66E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene09953 | 0.826967 | 2.03E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene09953 | 0.838135 | 3.44E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene09953 | 0.807886 | 4.06E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene09953 | 0.802022 | 6.83E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene09953 | 0.884638 | 1.62E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene09953 | 0.817425 | 3.32E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene09953 | 0.829898 | 3.98E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene09953 | 0.819426 | 1.17E-52 | -1.69E-46 |
| MS.gene052346 | MS.gene09953 | 0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene09953 | 0.855041 | 8.23E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene09953 | 0.83589 | 1.29E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene09953 | 0.805688 | 1.18E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene09953 | 0.811399 | 7.14E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene09953 | 0.841882 | 3.63E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene09953 | 0.816669 | 4.91E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene09953 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene09953 | 0.807438 | 5.05E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene09953 | 0.839258 | 1.76E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene09953 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene09953 | 0.826609 | 2.47E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene09953 | 0.826032 | 3.39E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene09953 | 0.818035 | 2.42E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene09953 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene09953 | 0.832442 | 9.43E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene09953 | 0.829188 | 5.92E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene09953 | 0.833091 | 6.51E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene09953 | 0.825337 | 4.95E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene09953 | 0.824437 | 8.07E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene09953 | 0.818995 | 1.47E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene09953 | 0.80818 | 3.52E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene09953 | 0.831739 | 1.41E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene09953 | 0.832198 | 1.08E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene09953 | 0.848593 | 5.55E-60 | -1.69E-46 |
| MS.gene055369 | MS.gene09953 | 0.810575 | 1.08E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene09953 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene09953 | 0.85164 | 7.78E-61 | -1.69E-46 |
| MS.gene05553 | MS.gene09953 | 0.819727 | 9.98E-53 | -1.69E-46 |
| MS.gene055620 | MS.gene09953 | 0.804372 | 2.23E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene09953 | 0.82121 | 4.56E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene09953 | 0.817354 | 3.45E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene09953 | 0.861651 | 8.83E-64 | -1.69E-46 |
| MS.gene055744 | MS.gene09953 | 0.863495 | 2.39E-64 | -1.69E-46 |
| MS.gene055909 | MS.gene09953 | 0.835219 | 1.91E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene09953 | 0.842015 | 3.35E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene09953 | 0.83258 | 8.72E-56 | -1.69E-46 |
| MS.gene05602 | MS.gene09953 | 0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene09953 | 0.839888 | 1.21E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene09953 | 0.838499 | 2.77E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene09953 | 0.820717 | 5.92E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene09953 | 0.823745 | 1.17E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene09953 | 0.855255 | 7.13E-62 | -1.69E-46 |
| MS.gene056609 | MS.gene09953 | 0.822498 | 2.29E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene09953 | 0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene09953 | 0.846382 | 2.25E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene09953 | 0.81769 | 2.89E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene09953 | 0.800961 | 1.13E-48 | -1.69E-46 |
| MS.gene057019 | MS.gene09953 | 0.806047 | 9.94E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene09953 | 0.846798 | 1.73E-59 | -1.69E-46 |
| MS.gene057124 | MS.gene09953 | 0.836844 | 7.38E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene09953 | 0.82107 | 4.91E-53 | -1.69E-46 |
| MS.gene057289 | MS.gene09953 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene05735 | MS.gene09953 | 0.802949 | 4.40E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene09953 | 0.81189 | 5.58E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene09953 | 0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene09953 | 0.804772 | 1.84E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene09953 | 0.840614 | 7.82E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene09953 | 0.8553 | 6.92E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene09953 | 0.85802 | 1.10E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene09953 | 0.868485 | 6.31E-66 | -1.69E-46 |
| MS.gene058019 | MS.gene09953 | 0.826225 | 3.05E-54 | -1.69E-46 |
| MS.gene058075 | MS.gene09953 | 0.800932 | 1.14E-48 | -1.69E-46 |
| MS.gene058082 | MS.gene09953 | 0.807714 | 4.42E-50 | -1.69E-46 |
| MS.gene058090 | MS.gene09953 | 0.814139 | 1.79E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene09953 | 0.872865 | 2.29E-67 | -1.69E-46 |
| MS.gene058130 | MS.gene09953 | 0.812987 | 3.21E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene09953 | 0.807901 | 4.03E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene09953 | 0.840961 | 6.34E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene09953 | 0.827461 | 1.55E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene09953 | 0.851516 | 8.44E-61 | -1.69E-46 |
| MS.gene058660 | MS.gene09953 | 0.838196 | 3.32E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene09953 | 0.897808 | 9.82E-77 | -1.69E-46 |
| MS.gene058748 | MS.gene09953 | 0.82043 | 6.89E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene09953 | 0.821187 | 4.61E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene09953 | 0.891547 | 3.60E-74 | -1.69E-46 |
| MS.gene058949 | MS.gene09953 | 0.814006 | 1.92E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene09953 | 0.822089 | 2.85E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene09953 | 0.842606 | 2.33E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene09953 | 0.847762 | 9.42E-60 | -1.69E-46 |
| MS.gene059368 | MS.gene09953 | 0.821524 | 3.86E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene09953 | 0.839362 | 1.66E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene09953 | 0.832793 | 7.72E-56 | -1.69E-46 |
| MS.gene059499 | MS.gene09953 | 0.80802 | 3.80E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene09953 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene09953 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene059674 | MS.gene09953 | 0.832114 | 1.14E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene09953 | 0.869124 | 3.92E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene09953 | 0.868924 | 4.55E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene09953 | 0.852509 | 4.41E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene09953 | 0.8592 | 4.88E-63 | -1.69E-46 |
| MS.gene059711 | MS.gene09953 | 0.839812 | 1.27E-57 | -1.69E-46 |
| MS.gene059807 | MS.gene09953 | 0.817143 | 3.84E-52 | -1.69E-46 |
| MS.gene05986 | MS.gene09953 | 0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene060247 | MS.gene09953 | 0.806377 | 8.47E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene09953 | 0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene09953 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene09953 | 0.844695 | 6.45E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene09953 | 0.852296 | 5.07E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene09953 | 0.87842 | 2.85E-69 | -1.69E-46 |
| MS.gene061041 | MS.gene09953 | 0.830213 | 3.33E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene09953 | -0.842523 | 2.46E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene09953 | 0.842573 | 2.38E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene09953 | 0.809294 | 2.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025792 | MS.gene09953 | PPI |
| MS.gene036055 | MS.gene09953 | PPI |
| MS.gene23970 | MS.gene09953 | PPI |
| MS.gene015453 | MS.gene09953 | PPI |
| MS.gene76883 | MS.gene09953 | PPI |
| MS.gene21150 | MS.gene09953 | PPI |
| MS.gene09953 | MS.gene025792 | PPI |
| MS.gene038078 | MS.gene09953 | PPI |
| MS.gene89575 | MS.gene09953 | PPI |
| MS.gene99127 | MS.gene09953 | PPI |
| MS.gene63578 | MS.gene09953 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09953.t1 | MTR_5g012130 | 96.674 | 451 | 15 | 0 | 1 | 451 | 1 | 451 | 0.0 | 908 |
| MS.gene09953.t1 | MTR_5g012130 | 97.264 | 329 | 9 | 0 | 1 | 329 | 21 | 349 | 0.0 | 664 |
| MS.gene09953.t1 | MTR_5g012130 | 96.154 | 260 | 10 | 0 | 1 | 260 | 21 | 280 | 3.03e-176 | 494 |
| MS.gene09953.t1 | MTR_8g037880 | 53.440 | 436 | 187 | 5 | 13 | 442 | 4 | 429 | 5.35e-164 | 469 |
| MS.gene09953.t1 | MTR_8g037910 | 53.302 | 424 | 190 | 4 | 13 | 436 | 4 | 419 | 1.40e-160 | 461 |
| MS.gene09953.t1 | MTR_3g437580 | 47.692 | 455 | 213 | 9 | 1 | 442 | 1 | 443 | 3.41e-147 | 427 |
| MS.gene09953.t1 | MTR_8g037910 | 56.604 | 318 | 134 | 3 | 13 | 330 | 4 | 317 | 1.15e-125 | 367 |
| MS.gene09953.t1 | MTR_3g437580 | 50.437 | 343 | 154 | 7 | 1 | 330 | 1 | 340 | 3.95e-116 | 345 |
| MS.gene09953.t1 | MTR_8g037910 | 53.480 | 273 | 123 | 3 | 13 | 285 | 4 | 272 | 1.60e-96 | 291 |
| MS.gene09953.t1 | MTR_2g450510 | 23.622 | 254 | 134 | 9 | 11 | 231 | 3 | 229 | 7.43e-13 | 70.9 |
| MS.gene09953.t1 | MTR_7g107690 | 26.087 | 230 | 132 | 7 | 13 | 236 | 8 | 205 | 1.34e-12 | 69.3 |
| MS.gene09953.t1 | MTR_7g107710 | 23.132 | 281 | 179 | 6 | 13 | 291 | 6 | 251 | 1.51e-12 | 69.3 |
| MS.gene09953.t1 | MTR_7g099330 | 24.034 | 233 | 135 | 6 | 14 | 237 | 25 | 224 | 2.25e-12 | 68.9 |
| MS.gene09953.t1 | MTR_2g450310 | 23.438 | 256 | 132 | 9 | 11 | 231 | 3 | 229 | 2.54e-12 | 68.9 |
| MS.gene09953.t1 | MTR_1g069275 | 24.554 | 224 | 138 | 6 | 15 | 236 | 27 | 221 | 5.95e-12 | 67.8 |
| MS.gene09953.t1 | MTR_3g109520 | 24.898 | 245 | 150 | 7 | 15 | 253 | 41 | 257 | 1.15e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09953.t1 | AT1G62620 | 61.726 | 452 | 162 | 5 | 6 | 450 | 3 | 450 | 0.0 | 582 |
| MS.gene09953.t1 | AT1G63370 | 61.504 | 452 | 163 | 5 | 6 | 450 | 3 | 450 | 0.0 | 582 |
| MS.gene09953.t1 | AT1G62600 | 62.555 | 454 | 159 | 6 | 2 | 449 | 3 | 451 | 0.0 | 571 |
| MS.gene09953.t1 | AT1G12200 | 60.526 | 456 | 169 | 6 | 1 | 449 | 1 | 452 | 0.0 | 546 |
| MS.gene09953.t1 | AT1G62560 | 55.408 | 453 | 196 | 3 | 1 | 451 | 1 | 449 | 0.0 | 528 |
| MS.gene09953.t1 | AT1G12140 | 58.499 | 453 | 181 | 3 | 1 | 451 | 1 | 448 | 0.0 | 528 |
| MS.gene09953.t1 | AT1G12140 | 58.499 | 453 | 181 | 3 | 1 | 451 | 1 | 448 | 0.0 | 528 |
| MS.gene09953.t1 | AT1G62580 | 60.177 | 452 | 173 | 6 | 1 | 449 | 2 | 449 | 0.0 | 525 |
| MS.gene09953.t1 | AT1G62620 | 64.767 | 386 | 129 | 4 | 6 | 384 | 3 | 388 | 0.0 | 522 |
| MS.gene09953.t1 | AT1G12140 | 58.057 | 453 | 181 | 4 | 1 | 451 | 1 | 446 | 0.0 | 519 |
| MS.gene09953.t1 | AT1G65860 | 55.088 | 452 | 195 | 5 | 2 | 451 | 3 | 448 | 0.0 | 515 |
| MS.gene09953.t1 | AT1G62600 | 65.039 | 389 | 129 | 5 | 2 | 384 | 3 | 390 | 1.46e-178 | 505 |
| MS.gene09953.t1 | AT1G62540 | 56.291 | 453 | 191 | 4 | 1 | 451 | 1 | 448 | 5.23e-178 | 506 |
| MS.gene09953.t1 | AT1G12160 | 53.289 | 456 | 193 | 4 | 11 | 450 | 10 | 461 | 4.90e-177 | 504 |
| MS.gene09953.t1 | AT1G62580 | 56.082 | 485 | 173 | 8 | 1 | 449 | 2 | 482 | 1.31e-176 | 504 |
| MS.gene09953.t1 | AT1G62570 | 56.416 | 452 | 189 | 5 | 2 | 451 | 3 | 448 | 2.46e-175 | 499 |
| MS.gene09953.t1 | AT1G62540 | 53.556 | 478 | 190 | 5 | 1 | 451 | 1 | 473 | 1.03e-173 | 496 |
| MS.gene09953.t1 | AT1G62560 | 59.067 | 386 | 156 | 2 | 1 | 384 | 1 | 386 | 4.85e-170 | 483 |
| MS.gene09953.t1 | AT1G12130 | 53.219 | 466 | 185 | 8 | 8 | 450 | 8 | 463 | 4.65e-166 | 476 |
| MS.gene09953.t1 | AT1G62540 | 53.422 | 453 | 186 | 6 | 1 | 451 | 1 | 430 | 1.07e-163 | 469 |
| MS.gene09953.t1 | AT1G63340 | 53.982 | 452 | 161 | 5 | 1 | 449 | 2 | 409 | 2.93e-162 | 464 |
| MS.gene09953.t1 | AT1G63370 | 63.664 | 333 | 114 | 4 | 6 | 331 | 3 | 335 | 4.29e-155 | 443 |
| MS.gene09953.t1 | AT5G61290 | 48.533 | 443 | 208 | 8 | 11 | 442 | 14 | 447 | 1.57e-149 | 434 |
| MS.gene09953.t1 | AT5G07800 | 46.696 | 454 | 220 | 9 | 11 | 450 | 14 | 459 | 1.24e-145 | 424 |
| MS.gene09953.t1 | AT1G12200 | 64.095 | 337 | 113 | 5 | 1 | 330 | 1 | 336 | 9.68e-144 | 416 |
| MS.gene09953.t1 | AT1G62580 | 61.628 | 344 | 116 | 5 | 1 | 329 | 2 | 344 | 5.50e-133 | 387 |
| MS.gene09953.t1 | AT1G63390 | 58.125 | 160 | 61 | 4 | 2 | 156 | 3 | 161 | 4.69e-48 | 162 |
| MS.gene09953.t1 | AT5G45180 | 23.356 | 441 | 216 | 17 | 9 | 359 | 9 | 417 | 3.19e-15 | 78.2 |
| MS.gene09953.t1 | AT1G19250 | 28.340 | 247 | 121 | 10 | 8 | 224 | 8 | 228 | 5.76e-14 | 74.3 |
| MS.gene09953.t1 | AT5G11320 | 23.214 | 224 | 136 | 5 | 15 | 236 | 19 | 208 | 3.17e-12 | 68.2 |
| MS.gene09953.t1 | AT5G11320 | 23.214 | 224 | 136 | 5 | 15 | 236 | 19 | 208 | 5.31e-12 | 67.8 |
| MS.gene09953.t1 | AT4G28720 | 24.561 | 228 | 138 | 6 | 14 | 236 | 26 | 224 | 5.19e-11 | 64.7 |
Find 144 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTGGGGTGGGTGAAGG+TGG | 0.205048 | 5.2:-4533188 | MS.gene09953:CDS |
| CAATTTGCCTCGGGAGAGTA+TGG | 0.242875 | 5.2:-4533360 | MS.gene09953:CDS |
| TAAGAGGCACACTCATAATA+TGG | 0.255894 | 5.2:-4530961 | MS.gene09953:CDS |
| AAGAAAATAACCAGGAATAT+TGG | 0.264046 | 5.2:+4533064 | None:intergenic |
| CTCCATGGCTTTCCTTTGTT+GGG | 0.291150 | 5.2:-4531136 | MS.gene09953:CDS |
| AAGACAGAGGTGGTGTTTGC+TGG | 0.296073 | 5.2:-4533203 | MS.gene09953:CDS |
| ATATTATGAGTGTGCCTCTT+AGG | 0.298315 | 5.2:+4530963 | None:intergenic |
| TAACATGTGGCTTCATTCTA+TGG | 0.307413 | 5.2:-4531746 | MS.gene09953:intron |
| TGCAGTGGGACTACAATAAC+TGG | 0.310122 | 5.2:-4529871 | MS.gene09953:intron |
| GTGTTTGCTGGGGTGGGTGA+AGG | 0.313072 | 5.2:-4533191 | MS.gene09953:CDS |
| CACGGGCTCGGCCAATGTTC+AGG | 0.313423 | 5.2:-4530937 | MS.gene09953:intron |
| CATACTCTCCCGAGGCAAAT+TGG | 0.320024 | 5.2:+4533361 | None:intergenic |
| GGGTAGGTTGTAGTTCTAAT+AGG | 0.325138 | 5.2:-4531883 | MS.gene09953:intron |
| GCTCGGGTGTTCTGTAATTA+TGG | 0.325418 | 5.2:+4532214 | None:intergenic |
| AGAAAATAACCAGGAATATT+GGG | 0.332604 | 5.2:+4533065 | None:intergenic |
| GCTCCATGGCTTTCCTTTGT+TGG | 0.336615 | 5.2:-4531137 | MS.gene09953:CDS |
| CCGAGACTTCCCAATATTCC+TGG | 0.353788 | 5.2:-4533074 | MS.gene09953:intron |
| GGGTGGGTGAAGGTGGGAAA+TGG | 0.367744 | 5.2:-4533181 | MS.gene09953:CDS |
| GCCGATGACTGCCACGTGGC+GGG | 0.373968 | 5.2:+4533568 | None:intergenic |
| TGGCTATGCATTTGCTTCCC+TGG | 0.375441 | 5.2:+4532234 | None:intergenic |
| AGAGGTGGTGTTTGCTGGGG+TGG | 0.381682 | 5.2:-4533198 | MS.gene09953:CDS |
| CTTTGTTGGGTTACCTTGGA+AGG | 0.382913 | 5.2:-4531123 | MS.gene09953:CDS |
| ATGGAGAACGCAAATGTATA+TGG | 0.387354 | 5.2:-4529813 | MS.gene09953:CDS |
| AGTGGATAAGCATCCGGTTC+GGG | 0.388826 | 5.2:+4533408 | None:intergenic |
| TGCTACTAAGCCTCCGGCGC+CGG | 0.388838 | 5.2:+4533544 | None:intergenic |
| TGGTTCGGAGTGAATTGTAT+AGG | 0.394896 | 5.2:+4533381 | None:intergenic |
| TACTTGTCACTTGAAGAATC+TGG | 0.396469 | 5.2:-4530990 | MS.gene09953:CDS |
| TACTTGATCTTGAAAGGGCT+CGG | 0.401139 | 5.2:+4532197 | None:intergenic |
| AGAAAGGGAGAGATTGTAGA+AGG | 0.404469 | 5.2:-4533304 | MS.gene09953:CDS |
| CACTCGGTTTGGACCCGAAC+CGG | 0.407878 | 5.2:-4533421 | MS.gene09953:CDS |
| CTTCGAGCGAGGAGAAGAAT+TGG | 0.410605 | 5.2:-4533483 | MS.gene09953:CDS |
| GAGGTGGTGTTTGCTGGGGT+GGG | 0.423874 | 5.2:-4533197 | MS.gene09953:CDS |
| CTGCAGAGCAAGTGGATAGC+TGG | 0.424635 | 5.2:-4531077 | MS.gene09953:CDS |
| AGTGGGTCGGATTCTATCTC+TGG | 0.428807 | 5.2:+4533440 | None:intergenic |
| GCAGTCATCGGCGCCGGCGC+CGG | 0.432692 | 5.2:-4533557 | MS.gene09953:CDS |
| GAGAAGAATTGGGCGGTTCA+TGG | 0.435788 | 5.2:-4533472 | MS.gene09953:CDS |
| TTCTTCTAAAAGGGTAATCT+CGG | 0.436563 | 5.2:+4533333 | None:intergenic |
| TCACCACACCATTGGTTTCA+AGG | 0.437617 | 5.2:+4531216 | None:intergenic |
| GAGTGGATAAGCATCCGGTT+CGG | 0.438750 | 5.2:+4533407 | None:intergenic |
| AGAATCCGACCCACTCGGTT+TGG | 0.439148 | 5.2:-4533432 | MS.gene09953:CDS |
| CACGTGGCAGTCATCGGCGC+CGG | 0.444457 | 5.2:-4533563 | MS.gene09953:CDS |
| ATCACTTACTTGATCTTGAA+AGG | 0.452689 | 5.2:+4532191 | None:intergenic |
| TTTAGAAGAAAAGAAGAGAA+AGG | 0.454059 | 5.2:-4533320 | MS.gene09953:CDS |
| TTGCTGGGGTGGGTGAAGGT+GGG | 0.455177 | 5.2:-4533187 | MS.gene09953:CDS |
| TTCCACCGGCGTTAGCTCCA+TGG | 0.457976 | 5.2:-4531151 | MS.gene09953:CDS |
| TGTGAGAAGTGGTGTTGCGG+TGG | 0.462747 | 5.2:+4533592 | None:intergenic |
| TCAGGCATTAATGCATGGCC+AGG | 0.465216 | 5.2:-4532252 | MS.gene09953:intron |
| TTTCCTTTGTTGGGTTACCT+TGG | 0.473219 | 5.2:-4531127 | MS.gene09953:CDS |
| TTAGAAGAAAAGAAGAGAAA+GGG | 0.478877 | 5.2:-4533319 | MS.gene09953:CDS |
| TGCTCTGCAGTTCAAACAAA+GGG | 0.480096 | 5.2:+4531090 | None:intergenic |
| AGACAGAGGTGGTGTTTGCT+GGG | 0.480683 | 5.2:-4533202 | MS.gene09953:CDS |
| GTTCTCCATTCTTCCATAGC+AGG | 0.489761 | 5.2:+4529827 | None:intergenic |
| GTCATCGGCGCCGGCGCCGG+AGG | 0.490906 | 5.2:-4533554 | MS.gene09953:CDS |
| CACTCCGAACCAATTTGCCT+CGG | 0.495195 | 5.2:-4533370 | MS.gene09953:CDS |
| CACTCGTCACGATAAGTCTC+AGG | 0.501205 | 5.2:+4529764 | None:intergenic |
| GACTTCATTGTACATTGCAC+AGG | 0.505864 | 5.2:-4531549 | MS.gene09953:CDS |
| TCATAATATGGGCACGGGCT+CGG | 0.507929 | 5.2:-4530949 | MS.gene09953:CDS |
| TTTCCTTTCCTTGAAACCAA+TGG | 0.508177 | 5.2:-4531224 | MS.gene09953:CDS |
| TCAGTGCGGTGTTCCTGCTA+TGG | 0.508464 | 5.2:-4529840 | MS.gene09953:CDS |
| GGCTCGAGTGGATAAGCATC+CGG | 0.508764 | 5.2:+4533402 | None:intergenic |
| GCGTGCTGCTACTAAGCCTC+CGG | 0.510739 | 5.2:+4533538 | None:intergenic |
| ATATGGCTACATCTAAGAAC+AGG | 0.511352 | 5.2:-4529796 | MS.gene09953:CDS |
| ACTTGATCTTGAAAGGGCTC+GGG | 0.512775 | 5.2:+4532198 | None:intergenic |
| AGAAGAATTGGGCGGTTCAT+GGG | 0.513280 | 5.2:-4533471 | MS.gene09953:CDS |
| GTGAGAAGTGGTGTTGCGGT+GGG | 0.518569 | 5.2:+4533593 | None:intergenic |
| TCACTTACTTGATCTTGAAA+GGG | 0.518929 | 5.2:+4532192 | None:intergenic |
| TTGAGATTGGTGATTTGGTG+AGG | 0.519792 | 5.2:-4533229 | MS.gene09953:CDS |
| TTCGAGCGAGGAGAAGAATT+GGG | 0.519829 | 5.2:-4533482 | MS.gene09953:CDS |
| TCTCCCGAGGCAAATTGGTT+CGG | 0.520142 | 5.2:+4533366 | None:intergenic |
| AGCCACATGTTATCATGGCC+AGG | 0.523909 | 5.2:+4531757 | None:intergenic |
| CCCCGCCACGTGGCAGTCAT+CGG | 0.524579 | 5.2:-4533569 | MS.gene09953:CDS |
| AATGAAGCCACATGTTATCA+TGG | 0.526082 | 5.2:+4531752 | None:intergenic |
| ACTCCGAACCAATTTGCCTC+GGG | 0.526203 | 5.2:-4533369 | MS.gene09953:CDS |
| AAGAGGCACACTCATAATAT+GGG | 0.527124 | 5.2:-4530960 | MS.gene09953:CDS |
| GGGAAAGGAGCAACCTTCCA+AGG | 0.527136 | 5.2:+4531110 | None:intergenic |
| ATCTACGGTCACCACACCAT+TGG | 0.533574 | 5.2:+4531208 | None:intergenic |
| TCTGTTGAAGAAGATAAGCT+TGG | 0.538010 | 5.2:-4531787 | MS.gene09953:CDS |
| CATTGCCCTTCCTTCAGAAG+AGG | 0.538791 | 5.2:-4531039 | MS.gene09953:CDS |
| GGAGATGACTAAAGATATTG+AGG | 0.539150 | 5.2:-4531018 | MS.gene09953:CDS |
| TGTAGAAGGTTCCCGAGTCA+TGG | 0.539602 | 5.2:-4533290 | MS.gene09953:CDS |
| ATTGACAGTGTTCATGAAGA+TGG | 0.540078 | 5.2:-4531609 | MS.gene09953:CDS |
| ACACCATTGGTTTCAAGGAA+AGG | 0.541856 | 5.2:+4531221 | None:intergenic |
| GAGATCTAGATCGGTGGAGA+GGG | 0.542522 | 5.2:-4533153 | MS.gene09953:CDS |
| AAGAATCTGGCATTCCTAAG+AGG | 0.544319 | 5.2:-4530977 | MS.gene09953:CDS |
| TCATCTCCTCTTCTGAAGGA+AGG | 0.544426 | 5.2:+4531033 | None:intergenic |
| CATCTCCTCTTCTGAAGGAA+GGG | 0.547731 | 5.2:+4531034 | None:intergenic |
| GGGTGTGAGAAGTGGTGTTG+CGG | 0.549595 | 5.2:+4533589 | None:intergenic |
| CCAGGAATATTGGGAAGTCT+CGG | 0.551573 | 5.2:+4533074 | None:intergenic |
| TTAGTCATCTCCTCTTCTGA+AGG | 0.554548 | 5.2:+4531029 | None:intergenic |
| GGGTGAAGGTGGGAAATGGA+CGG | 0.554732 | 5.2:-4533177 | MS.gene09953:CDS |
| ATCAAAACCTCTCCATGACT+CGG | 0.555813 | 5.2:+4533278 | None:intergenic |
| TGTTTGAACTGCAGAGCAAG+TGG | 0.561360 | 5.2:-4531085 | MS.gene09953:CDS |
| GCACGCGAGCTCCGACGAGA+AGG | 0.564731 | 5.2:-4533521 | MS.gene09953:CDS |
| AATATGAACTTCTTTAGCAA+CGG | 0.565855 | 5.2:+4531819 | None:intergenic |
| TGCAGTTCAAACAAAGGGAA+AGG | 0.568166 | 5.2:+4531095 | None:intergenic |
| GATGCTGTTGTTGTTTGCAA+TGG | 0.576128 | 5.2:-4533110 | MS.gene09953:CDS |
| CGCCGATGACTGCCACGTGG+CGG | 0.576460 | 5.2:+4533567 | None:intergenic |
| GTGTTCCTGCTATGGAAGAA+TGG | 0.577997 | 5.2:-4529832 | MS.gene09953:CDS |
| ATATAAAGGCACCTGAACAT+TGG | 0.580551 | 5.2:+4530926 | None:intergenic |
| GATAAGCTTGGAAAGTTACC+TGG | 0.583301 | 5.2:-4531775 | MS.gene09953:CDS |
| TTGCTCTGCAGTTCAAACAA+AGG | 0.584189 | 5.2:+4531089 | None:intergenic |
| CACACTCATAATATGGGCAC+GGG | 0.585534 | 5.2:-4530954 | MS.gene09953:CDS |
| ACCGTAGATGACAATCGTGT+TGG | 0.587555 | 5.2:-4531194 | MS.gene09953:CDS |
| GACAGAGGTGGTGTTTGCTG+GGG | 0.588809 | 5.2:-4533201 | MS.gene09953:CDS |
| CCGATGACTGCCACGTGGCG+GGG | 0.590887 | 5.2:+4533569 | None:intergenic |
| TCGAGAAATATCAACCGCAC+TGG | 0.594589 | 5.2:+4531852 | None:intergenic |
| TGAGATCTAGATCGGTGGAG+AGG | 0.598722 | 5.2:-4533154 | MS.gene09953:CDS |
| TCCAACACGATTGTCATCTA+CGG | 0.599218 | 5.2:+4531193 | None:intergenic |
| CTACTTGATGTCCTTCTCGT+CGG | 0.601788 | 5.2:+4533510 | None:intergenic |
| TAGGTTGTAGTTCTAATAGG+TGG | 0.603871 | 5.2:-4531880 | MS.gene09953:CDS |
| CGGGTCCAAACCGAGTGGGT+CGG | 0.604890 | 5.2:+4533427 | None:intergenic |
| CGGCGCCGATGACTGCCACG+TGG | 0.606541 | 5.2:+4533564 | None:intergenic |
| AACCCAACAAAGGAAAGCCA+TGG | 0.607422 | 5.2:+4531134 | None:intergenic |
| GCACACTCATAATATGGGCA+CGG | 0.608045 | 5.2:-4530955 | MS.gene09953:CDS |
| ACGTGGCGGGGTGTGAGAAG+TGG | 0.608557 | 5.2:+4533581 | None:intergenic |
| TCAAAACCTCTCCATGACTC+GGG | 0.609566 | 5.2:+4533279 | None:intergenic |
| GAGATAGAATCCGACCCACT+CGG | 0.610030 | 5.2:-4533437 | MS.gene09953:CDS |
| GTGAATTGTATAGGCTCGAG+TGG | 0.612633 | 5.2:+4533390 | None:intergenic |
| AATTTGCCTCGGGAGAGTAT+GGG | 0.615300 | 5.2:-4533359 | MS.gene09953:CDS |
| ATGGACGGTGAGATCTAGAT+CGG | 0.619336 | 5.2:-4533162 | MS.gene09953:CDS |
| GACGGTGAGATCTAGATCGG+TGG | 0.626733 | 5.2:-4533159 | MS.gene09953:CDS |
| AGCCATGGAGCTAACGCCGG+TGG | 0.629282 | 5.2:+4531149 | None:intergenic |
| CAGGCATTAATGCATGGCCA+GGG | 0.629289 | 5.2:-4532251 | MS.gene09953:CDS |
| ATCGGTGGAGAGGGAATGTG+TGG | 0.636731 | 5.2:-4533144 | MS.gene09953:CDS |
| AAGGTTCCCGAGTCATGGAG+AGG | 0.638374 | 5.2:-4533285 | MS.gene09953:CDS |
| GGTTGATATTTCTCGAGACG+TGG | 0.639339 | 5.2:-4531845 | MS.gene09953:CDS |
| GGTTCGGGTCCAAACCGAGT+GGG | 0.639823 | 5.2:+4533423 | None:intergenic |
| CTGAGACTTATCGTGACGAG+TGG | 0.640097 | 5.2:-4529763 | MS.gene09953:CDS |
| TTTCCTTGAAACCAATGGTG+TGG | 0.641481 | 5.2:-4531219 | MS.gene09953:CDS |
| CGGTTCGGGTCCAAACCGAG+TGG | 0.655637 | 5.2:+4533422 | None:intergenic |
| TTTGGTGAGGTTGAAGACAG+AGG | 0.656329 | 5.2:-4533216 | MS.gene09953:CDS |
| GAGCGAGGAGAAGAATTGGG+CGG | 0.661680 | 5.2:-4533479 | MS.gene09953:CDS |
| CAAGTAGTAGTCTTCGAGCG+AGG | 0.661706 | 5.2:-4533494 | MS.gene09953:CDS |
| TGAGACTTATCGTGACGAGT+GGG | 0.661820 | 5.2:-4529762 | MS.gene09953:CDS |
| TACCTGGCCATGATAACATG+TGG | 0.663783 | 5.2:-4531759 | MS.gene09953:CDS |
| CGGAAACCCATACTCTCCCG+AGG | 0.666291 | 5.2:+4533353 | None:intergenic |
| CTTCCAAGGTAACCCAACAA+AGG | 0.675077 | 5.2:+4531124 | None:intergenic |
| GAAAGCCATGGAGCTAACGC+CGG | 0.676417 | 5.2:+4531146 | None:intergenic |
| TGTTCATGAAGATGGTACAG+TGG | 0.683307 | 5.2:-4531601 | MS.gene09953:CDS |
| ACTTCATTGTACATTGCACA+GGG | 0.687673 | 5.2:-4531548 | MS.gene09953:intron |
| ACTTCTCACACCCCGCCACG+TGG | 0.689666 | 5.2:-4533579 | MS.gene09953:CDS |
| GGTGAGGTTGAAGACAGAGG+TGG | 0.690231 | 5.2:-4533213 | MS.gene09953:CDS |
| AATAGGTGGTGCTGCCAGTG+CGG | 0.737644 | 5.2:-4531866 | MS.gene09953:CDS |
| AACTGGATTGCTGATCAGTG+CGG | 0.766461 | 5.2:-4529854 | MS.gene09953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGCAATAAATAATTTA+AGG | + | chr5.2:4530831-4530850 | None:intergenic | 10.0% |
| !! | ACTTATTCATTAAAAAAAAA+AGG | - | chr5.2:4530596-4530615 | MS.gene09953:intron | 10.0% |
| !! | ATGAATAATCAAATAAAAAT+TGG | + | chr5.2:4530710-4530729 | None:intergenic | 10.0% |
| !! | TTTGATATAACAAAATATAA+AGG | + | chr5.2:4532393-4532412 | None:intergenic | 10.0% |
| !!! | ATGTTTTTATTTTTTTCAAT+TGG | - | chr5.2:4530408-4530427 | MS.gene09953:intron | 10.0% |
| !!! | TTTTTTTTTTAATGAATAAG+TGG | + | chr5.2:4530597-4530616 | None:intergenic | 10.0% |
| !! | ATTGTACTTATTATTGTTAT+AGG | - | chr5.2:4530919-4530938 | MS.gene09953:intron | 15.0% |
| !! | GTTTAAAAGAAAAACTAATA+GGG | + | chr5.2:4531793-4531812 | None:intergenic | 15.0% |
| !! | AATAGTTAACTATCCTTTAA+TGG | - | chr5.2:4533379-4533398 | MS.gene09953:CDS | 20.0% |
| !! | ATTAGAAAACAGAATATAAG+AGG | + | chr5.2:4530336-4530355 | None:intergenic | 20.0% |
| !! | CAAAATTCAACTTAACAATT+CGG | - | chr5.2:4531017-4531036 | MS.gene09953:CDS | 20.0% |
| !! | GGTTTAAAAGAAAAACTAAT+AGG | + | chr5.2:4531794-4531813 | None:intergenic | 20.0% |
| !! | TAACTAAAAAAGAATCCTAA+TGG | + | chr5.2:4531162-4531181 | None:intergenic | 20.0% |
| !!! | ATGTCTCTTTCTTATTTATA+TGG | - | chr5.2:4530264-4530283 | MS.gene09953:intron | 20.0% |
| !!! | ATTTAGTTTAAAGACTAACA+AGG | + | chr5.2:4530444-4530463 | None:intergenic | 20.0% |
| ! | AAGAAAATAACCAGGAATAT+TGG | + | chr5.2:4530241-4530260 | None:intergenic | 25.0% |
| ! | AATATGAACTTCTTTAGCAA+CGG | + | chr5.2:4531486-4531505 | None:intergenic | 25.0% |
| ! | ACAAATTCAAATAGCTCATT+TGG | - | chr5.2:4531209-4531228 | MS.gene09953:CDS | 25.0% |
| ! | AGAAAATAACCAGGAATATT+GGG | + | chr5.2:4530240-4530259 | None:intergenic | 25.0% |
| ! | ATATGTATTGTTATAAGCAG+GGG | - | chr5.2:4530550-4530569 | MS.gene09953:intron | 25.0% |
| ! | ATATTGATACTAGTTCCATT+AGG | - | chr5.2:4531144-4531163 | MS.gene09953:CDS | 25.0% |
| ! | ATTAGTAACCATAAACTGTT+TGG | - | chr5.2:4531622-4531641 | MS.gene09953:intron | 25.0% |
| ! | ATTCTTAATTGTTCAGACTT+AGG | - | chr5.2:4533239-4533258 | MS.gene09953:CDS | 25.0% |
| ! | CACTATAATACAAGAAGAAA+CGG | + | chr5.2:4533203-4533222 | None:intergenic | 25.0% |
| ! | GAAATGAAATTGAAAAAGCT+TGG | + | chr5.2:4530359-4530378 | None:intergenic | 25.0% |
| ! | GAACTGTTGGATTTAATTAA+CGG | + | chr5.2:4533126-4533145 | None:intergenic | 25.0% |
| ! | GATATGTATTGTTATAAGCA+GGG | - | chr5.2:4530549-4530568 | MS.gene09953:intron | 25.0% |
| ! | TTACCTTTCAACAAAAATGT+TGG | - | chr5.2:4530676-4530695 | MS.gene09953:intron | 25.0% |
| ! | TTAGAAGAAAAGAAGAGAAA+GGG | - | chr5.2:4529983-4530002 | MS.gene09953:intron | 25.0% |
| ! | TTGAGGACTCAAATATATTT+AGG | - | chr5.2:4531950-4531969 | MS.gene09953:intron | 25.0% |
| ! | TTTAGAAGAAAAGAAGAGAA+AGG | - | chr5.2:4529982-4530001 | MS.gene09953:intron | 25.0% |
| !! | TTCTCTTCTTTTCTTCTAAA+AGG | + | chr5.2:4529982-4530001 | None:intergenic | 25.0% |
| !! | TTTTAAACCAGTTTATGTTG+TGG | - | chr5.2:4531805-4531824 | MS.gene09953:CDS | 25.0% |
| !!! | ATGGTAAAACTTGTTATCTA+TGG | - | chr5.2:4531575-4531594 | MS.gene09953:CDS | 25.0% |
| !!! | TAAGTTTTAAATCGCAAATG+CGG | - | chr5.2:4531831-4531850 | MS.gene09953:CDS | 25.0% |
| !!! | TCTCTTCTTTTCTTCTAAAA+GGG | + | chr5.2:4529981-4530000 | None:intergenic | 25.0% |
| !!! | TTCTATCCATTTTTTGTGTT+GGG | - | chr5.2:4531399-4531418 | MS.gene09953:intron | 25.0% |
| !!! | TTTATTAGGTTGTTTCTTCT+GGG | - | chr5.2:4532417-4532436 | MS.gene09953:intron | 25.0% |
| !!! | TTTTATTAGGTTGTTTCTTC+TGG | - | chr5.2:4532416-4532435 | MS.gene09953:intron | 25.0% |
| !!! | TTTTTTCAATTGGAATGACA+TGG | - | chr5.2:4530418-4530437 | MS.gene09953:intron | 25.0% |
| !!! | TTTTTTGTCAAGTAATCTGA+TGG | + | chr5.2:4530632-4530651 | None:intergenic | 25.0% |
| AAAAAATTGACTAGATCGCA+TGG | - | chr5.2:4533026-4533045 | MS.gene09953:intron | 30.0% | |
| AACATATCAGGTTCCATTAA+AGG | + | chr5.2:4533395-4533414 | None:intergenic | 30.0% | |
| AAGGATTGAATGGAAATCAA+TGG | - | chr5.2:4532944-4532963 | MS.gene09953:intron | 30.0% | |
| AAGGTTTAATTACCTGTGTT+TGG | - | chr5.2:4533065-4533084 | MS.gene09953:intron | 30.0% | |
| ACAGTTATCCAAACAGTTTA+TGG | + | chr5.2:4531633-4531652 | None:intergenic | 30.0% | |
| AGAACATGGTTAAAAAAACC+AGG | + | chr5.2:4533317-4533336 | None:intergenic | 30.0% | |
| AGAATACTCCATGATATAGA+CGG | - | chr5.2:4532800-4532819 | MS.gene09953:intron | 30.0% | |
| AGCATATGTAATATGTTCGA+TGG | + | chr5.2:4531341-4531360 | None:intergenic | 30.0% | |
| AGGTTTAATTACCTGTGTTT+GGG | - | chr5.2:4533066-4533085 | MS.gene09953:intron | 30.0% | |
| ATATATTTGAGTCCTCAACA+TGG | + | chr5.2:4531948-4531967 | None:intergenic | 30.0% | |
| ATCACTTACTTGATCTTGAA+AGG | + | chr5.2:4531114-4531133 | None:intergenic | 30.0% | |
| ATCATACTTGTACCTAGAAA+AGG | + | chr5.2:4532058-4532077 | None:intergenic | 30.0% | |
| CGTTTCTTCTTGTATTATAG+TGG | - | chr5.2:4533201-4533220 | MS.gene09953:CDS | 30.0% | |
| GGATATGTATTGTTATAAGC+AGG | - | chr5.2:4530548-4530567 | MS.gene09953:intron | 30.0% | |
| GTCAAATTAACATGAACTGT+TGG | + | chr5.2:4533139-4533158 | None:intergenic | 30.0% | |
| GTTGCTATAACATTGCAATT+TGG | + | chr5.2:4531901-4531920 | None:intergenic | 30.0% | |
| TAACCATGTTCTGTTTCAAA+AGG | - | chr5.2:4533325-4533344 | MS.gene09953:CDS | 30.0% | |
| TAATGGAACCTGATATGTTA+AGG | - | chr5.2:4533396-4533415 | MS.gene09953:CDS | 30.0% | |
| TACACATTCCTTAACATATC+AGG | + | chr5.2:4533407-4533426 | None:intergenic | 30.0% | |
| TATACAGAGCTAAAATATCC+TGG | - | chr5.2:4533296-4533315 | MS.gene09953:CDS | 30.0% | |
| TATCTATGGTGAGAATTAGA+TGG | - | chr5.2:4531589-4531608 | MS.gene09953:CDS | 30.0% | |
| TATGGTTACTAATGTCATGA+TGG | + | chr5.2:4531615-4531634 | None:intergenic | 30.0% | |
| TCAAGATCAAGTAAGTGATA+TGG | - | chr5.2:4531115-4531134 | MS.gene09953:CDS | 30.0% | |
| TCACTTACTTGATCTTGAAA+GGG | + | chr5.2:4531113-4531132 | None:intergenic | 30.0% | |
| TCCATTATTAGCTGGTAATT+CGG | - | chr5.2:4532718-4532737 | MS.gene09953:intron | 30.0% | |
| TGAATGGAAATCAATGGAAA+AGG | - | chr5.2:4532950-4532969 | MS.gene09953:intron | 30.0% | |
| ! | TGACCAACATTTTTGTTGAA+AGG | + | chr5.2:4530682-4530701 | None:intergenic | 30.0% |
| ! | TGCAATTTAAAACCATGTTG+AGG | - | chr5.2:4531933-4531952 | MS.gene09953:intron | 30.0% |
| ! | TTCTTCTAAAAGGGTAATCT+CGG | + | chr5.2:4529972-4529991 | None:intergenic | 30.0% |
| !! | AGAGGTTTTGATGTATTTGA+AGG | - | chr5.2:4530035-4530054 | MS.gene09953:intron | 30.0% |
| !! | CTGCAATATAAATGTTTTGG+AGG | - | chr5.2:4531854-4531873 | MS.gene09953:CDS | 30.0% |
| !! | TTGCATTTGACTTCATTTTG+TGG | + | chr5.2:4533275-4533294 | None:intergenic | 30.0% |
| !!! | AGATTTTGAGATTGGTGATT+TGG | - | chr5.2:4530068-4530087 | MS.gene09953:intron | 30.0% |
| !!! | CTTCTATCCATTTTTTGTGT+TGG | - | chr5.2:4531398-4531417 | MS.gene09953:intron | 30.0% |
| !!! | TTTGCTGAAGATTTTGAGAT+TGG | - | chr5.2:4530060-4530079 | MS.gene09953:intron | 30.0% |
| AACCTACCCAACACAAAAAA+TGG | + | chr5.2:4531408-4531427 | None:intergenic | 35.0% | |
| AATGAAGCCACATGTTATCA+TGG | + | chr5.2:4531553-4531572 | None:intergenic | 35.0% | |
| AATGGAGGTTAACAGATCTA+TGG | + | chr5.2:4532704-4532723 | None:intergenic | 35.0% | |
| ACTTCATTGTACATTGCACA+GGG | - | chr5.2:4531754-4531773 | MS.gene09953:CDS | 35.0% | |
| ACTTTATGAATGTGCTAGAG+TGG | + | chr5.2:4530291-4530310 | None:intergenic | 35.0% | |
| AGACTTTATGTCTCAATTGC+AGG | + | chr5.2:4531985-4532004 | None:intergenic | 35.0% | |
| AGGACACAAGAAATGGATAT+AGG | - | chr5.2:4532970-4532989 | MS.gene09953:intron | 35.0% | |
| ATATGGCTACATCTAAGAAC+AGG | - | chr5.2:4533506-4533525 | MS.gene09953:CDS | 35.0% | |
| ATATTATGAGTGTGCCTCTT+AGG | + | chr5.2:4532342-4532361 | None:intergenic | 35.0% | |
| ATGGAAAAGGACACAAGAAA+TGG | - | chr5.2:4532963-4532982 | MS.gene09953:intron | 35.0% | |
| ATGGAGAACGCAAATGTATA+TGG | - | chr5.2:4533489-4533508 | MS.gene09953:CDS | 35.0% | |
| ATGGAGGTTAACAGATCTAT+GGG | + | chr5.2:4532703-4532722 | None:intergenic | 35.0% | |
| ATTATTAGCTGGTAATTCGG+CGG | - | chr5.2:4532721-4532740 | MS.gene09953:intron | 35.0% | |
| ATTGACAGTGTTCATGAAGA+TGG | - | chr5.2:4531693-4531712 | MS.gene09953:intron | 35.0% | |
| CATGCATTAATGCCTGAAAA+AGG | + | chr5.2:4531047-4531066 | None:intergenic | 35.0% | |
| CATTGCAATTTGGACATTGT+CGG | + | chr5.2:4531891-4531910 | None:intergenic | 35.0% | |
| CGGTGGAGTAAAAATTATCT+TGG | - | chr5.2:4532904-4532923 | MS.gene09953:intron | 35.0% | |
| CTTAAGTCCACAACATAAAC+TGG | + | chr5.2:4531815-4531834 | None:intergenic | 35.0% | |
| GAATTACCAGCTAATAATGG+AGG | + | chr5.2:4532719-4532738 | None:intergenic | 35.0% | |
| GACATGAGAAGAAAATAACC+AGG | + | chr5.2:4530249-4530268 | None:intergenic | 35.0% | |
| GGAGATGACTAAAGATATTG+AGG | - | chr5.2:4532284-4532303 | MS.gene09953:intron | 35.0% | |
| GTAAGTTTCCGATGAATTGT+CGG | - | chr5.2:4532842-4532861 | MS.gene09953:intron | 35.0% | |
| GTACCTAGAAAAGGAACAAA+TGG | + | chr5.2:4532049-4532068 | None:intergenic | 35.0% | |
| TAACATGTGGCTTCATTCTA+TGG | - | chr5.2:4531556-4531575 | MS.gene09953:CDS | 35.0% | |
| TAATGAATAAGTGGTGTGTC+CGG | + | chr5.2:4530588-4530607 | None:intergenic | 35.0% | |
| TCACTGAGATAAGGATTGAA+TGG | - | chr5.2:4532934-4532953 | MS.gene09953:intron | 35.0% | |
| TCTGTTGAAGAAGATAAGCT+TGG | - | chr5.2:4531515-4531534 | MS.gene09953:intron | 35.0% | |
| TGTTAACCTCCATTATTAGC+TGG | - | chr5.2:4532710-4532729 | MS.gene09953:intron | 35.0% | |
| TTGACTGAATTTCGAAACTC+TGG | - | chr5.2:4533003-4533022 | MS.gene09953:intron | 35.0% | |
| TTGCAATGTTATAGCAACGA+CGG | - | chr5.2:4531903-4531922 | MS.gene09953:intron | 35.0% | |
| TTTACTCTAAACCCAAACAC+AGG | + | chr5.2:4533080-4533099 | None:intergenic | 35.0% | |
| TTTCCTTTCCTTGAAACCAA+TGG | - | chr5.2:4532078-4532097 | MS.gene09953:intron | 35.0% | |
| ! | AAGAGGCACACTCATAATAT+GGG | - | chr5.2:4532342-4532361 | MS.gene09953:intron | 35.0% |
| ! | CAATTCGGATAACCTTTTTC+AGG | - | chr5.2:4531032-4531051 | MS.gene09953:CDS | 35.0% |
| ! | CGGCTGCAATATAAATGTTT+TGG | - | chr5.2:4531851-4531870 | MS.gene09953:CDS | 35.0% |
| ! | GGTTTCCAATGTTTGAAATC+CGG | - | chr5.2:4532745-4532764 | MS.gene09953:intron | 35.0% |
| ! | TAAGAGGCACACTCATAATA+TGG | - | chr5.2:4532341-4532360 | MS.gene09953:intron | 35.0% |
| ! | TACTTGTCACTTGAAGAATC+TGG | - | chr5.2:4532312-4532331 | MS.gene09953:intron | 35.0% |
| ! | TCAGGAGGTTGTTGATAAAA+CGG | + | chr5.2:4532658-4532677 | None:intergenic | 35.0% |
| ! | TGTCCATTTGTTCCTTTTCT+AGG | - | chr5.2:4532043-4532062 | MS.gene09953:intron | 35.0% |
| !! | ATATAAAGGCACCTGAACAT+TGG | + | chr5.2:4532379-4532398 | None:intergenic | 35.0% |
| !! | TAGGTTGTAGTTCTAATAGG+TGG | - | chr5.2:4531422-4531441 | MS.gene09953:intron | 35.0% |
| !!! | ATCCATTTTTTGTGTTGGGT+AGG | - | chr5.2:4531403-4531422 | MS.gene09953:intron | 35.0% |
| !!! | ATGCCTTTTGAAACAGAACA+TGG | + | chr5.2:4533331-4533350 | None:intergenic | 35.0% |
| !!! | CTTTTTCAGGCATTAATGCA+TGG | - | chr5.2:4531045-4531064 | MS.gene09953:CDS | 35.0% |
| AAGAATCTGGCATTCCTAAG+AGG | - | chr5.2:4532325-4532344 | MS.gene09953:intron | 40.0% | |
| AATGAATAAGTGGTGTGTCC+GGG | + | chr5.2:4530587-4530606 | None:intergenic | 40.0% | |
| ACCGACAATTCATTGTTCGA+CGG | + | chr5.2:4532888-4532907 | None:intergenic | 40.0% | |
| AGAAAGGGAGAGATTGTAGA+AGG | - | chr5.2:4529998-4530017 | MS.gene09953:intron | 40.0% | |
| AGACGGTTCTGCAATTATCT+CGG | - | chr5.2:4532817-4532836 | MS.gene09953:intron | 40.0% | |
| AGGAATGTGTATTCTTGCAG+TGG | - | chr5.2:4533416-4533435 | MS.gene09953:CDS | 40.0% | |
| ATCAAAACCTCTCCATGACT+CGG | + | chr5.2:4530027-4530046 | None:intergenic | 40.0% | |
| CAGTTGTTCGATGCATCTAA+TGG | - | chr5.2:4532493-4532512 | MS.gene09953:intron | 40.0% | |
| CTCTACCGGATTTCAAACAT+TGG | + | chr5.2:4532753-4532772 | None:intergenic | 40.0% | |
| GACTTCATTGTACATTGCAC+AGG | - | chr5.2:4531753-4531772 | MS.gene09953:CDS | 40.0% | |
| GATAAGCTTGGAAAGTTACC+TGG | - | chr5.2:4531527-4531546 | MS.gene09953:intron | 40.0% | |
| GCCGAATTACCAGCTAATAA+TGG | + | chr5.2:4532722-4532741 | None:intergenic | 40.0% | |
| GGAAAAACATGCTTGTAGAG+CGG | + | chr5.2:4532135-4532154 | None:intergenic | 40.0% | |
| GGAATGTGTATTCTTGCAGT+GGG | - | chr5.2:4533417-4533436 | MS.gene09953:CDS | 40.0% | |
| GGTTGTGATTCACTGAGATA+AGG | - | chr5.2:4532925-4532944 | MS.gene09953:intron | 40.0% | |
| TACTTGATCTTGAAAGGGCT+CGG | + | chr5.2:4531108-4531127 | None:intergenic | 40.0% | |
| TAGATCGCATGGAAGAAGAA+GGG | - | chr5.2:4533037-4533056 | MS.gene09953:intron | 40.0% | |
| TCCAACACGATTGTCATCTA+CGG | + | chr5.2:4532112-4532131 | None:intergenic | 40.0% | |
| TGCAATGTTATAGCAACGAC+GGG | - | chr5.2:4531904-4531923 | MS.gene09953:intron | 40.0% | |
| TGCAGTTCAAACAAAGGGAA+AGG | + | chr5.2:4532210-4532229 | None:intergenic | 40.0% | |
| TGCTCTGCAGTTCAAACAAA+GGG | + | chr5.2:4532215-4532234 | None:intergenic | 40.0% | |
| TGGAGGTTAACAGATCTATG+GGG | + | chr5.2:4532702-4532721 | None:intergenic | 40.0% | |
| TGTATTGTTATAAGCAGGGG+CGG | - | chr5.2:4530553-4530572 | MS.gene09953:intron | 40.0% | |
| TGTTCATGAAGATGGTACAG+TGG | - | chr5.2:4531701-4531720 | MS.gene09953:intron | 40.0% | |
| TTACTCCACCGACAATTCAT+CGG | + | chr5.2:4532853-4532872 | None:intergenic | 40.0% | |
| TTAGTCATCTCCTCTTCTGA+AGG | + | chr5.2:4532276-4532295 | None:intergenic | 40.0% | |
| TTGCAGAACCGTCTATATCA+TGG | + | chr5.2:4532811-4532830 | None:intergenic | 40.0% | |
| TTGCTCTGCAGTTCAAACAA+AGG | + | chr5.2:4532216-4532235 | None:intergenic | 40.0% | |
| TTGGACATTGTCGGTAAATG+TGG | + | chr5.2:4531882-4531901 | None:intergenic | 40.0% | |
| TTTCCTTGAAACCAATGGTG+TGG | - | chr5.2:4532083-4532102 | MS.gene09953:intron | 40.0% | |
| TTTCCTTTGTTGGGTTACCT+TGG | - | chr5.2:4532175-4532194 | MS.gene09953:intron | 40.0% | |
| ! | ATGTTTGAAATCCGGTAGAG+TGG | - | chr5.2:4532753-4532772 | MS.gene09953:intron | 40.0% |
| ! | CTACAAGCATGTTTTTCCAC+CGG | - | chr5.2:4532137-4532156 | MS.gene09953:intron | 40.0% |
| ! | GGTACAGTGGTTTTCAAAGA+TGG | - | chr5.2:4531714-4531733 | MS.gene09953:intron | 40.0% |
| ! | TGGTTCGGAGTGAATTGTAT+AGG | + | chr5.2:4529924-4529943 | None:intergenic | 40.0% |
| !! | ACACCATTGGTTTCAAGGAA+AGG | + | chr5.2:4532084-4532103 | None:intergenic | 40.0% |
| !! | GATGCTGTTGTTGTTTGCAA+TGG | - | chr5.2:4530192-4530211 | MS.gene09953:intron | 40.0% |
| !! | GGGTAGGTTGTAGTTCTAAT+AGG | - | chr5.2:4531419-4531438 | MS.gene09953:intron | 40.0% |
| !! | TTGAGATTGGTGATTTGGTG+AGG | - | chr5.2:4530073-4530092 | MS.gene09953:intron | 40.0% |
| !!! | TAGCTCATTTGGTTTTGCGT+TGG | - | chr5.2:4531220-4531239 | MS.gene09953:CDS | 40.0% |
| AACCCAACAAAGGAAAGCCA+TGG | + | chr5.2:4532171-4532190 | None:intergenic | 45.0% | |
| AACTGGATTGCTGATCAGTG+CGG | - | chr5.2:4533448-4533467 | MS.gene09953:CDS | 45.0% | |
| ACCGTAGATGACAATCGTGT+TGG | - | chr5.2:4532108-4532127 | MS.gene09953:intron | 45.0% | |
| ACTTGATCTTGAAAGGGCTC+GGG | + | chr5.2:4531107-4531126 | None:intergenic | 45.0% | |
| AGAAGAATTGGGCGGTTCAT+GGG | - | chr5.2:4529831-4529850 | MS.gene09953:CDS | 45.0% | |
| AGTTTCCGATGAATTGTCGG+TGG | - | chr5.2:4532845-4532864 | MS.gene09953:intron | 45.0% | |
| ATGGACGGTGAGATCTAGAT+CGG | - | chr5.2:4530140-4530159 | MS.gene09953:intron | 45.0% | |
| ATGGTGCGTTACATTGGACA+CGG | + | chr5.2:4531322-4531341 | None:intergenic | 45.0% | |
| CACACTCATAATATGGGCAC+GGG | - | chr5.2:4532348-4532367 | MS.gene09953:intron | 45.0% | |
| CCAGGAATATTGGGAAGTCT+CGG | + | chr5.2:4530231-4530250 | None:intergenic | 45.0% | |
| CTACTTGATGTCCTTCTCGT+CGG | + | chr5.2:4529795-4529814 | None:intergenic | 45.0% | |
| CTAGATCGCATGGAAGAAGA+AGG | - | chr5.2:4533036-4533055 | MS.gene09953:intron | 45.0% | |
| CTCCATGGCTTTCCTTTGTT+GGG | - | chr5.2:4532166-4532185 | MS.gene09953:intron | 45.0% | |
| CTTCCAAGGTAACCCAACAA+AGG | + | chr5.2:4532181-4532200 | None:intergenic | 45.0% | |
| CTTTGTTGGGTTACCTTGGA+AGG | - | chr5.2:4532179-4532198 | MS.gene09953:intron | 45.0% | |
| GACAATTCATTGTTCGACGG+CGG | + | chr5.2:4532885-4532904 | None:intergenic | 45.0% | |
| GAGAAGAAAGGGGAATTGAC+GGG | + | chr5.2:4532571-4532590 | None:intergenic | 45.0% | |
| GCACACTCATAATATGGGCA+CGG | - | chr5.2:4532347-4532366 | MS.gene09953:intron | 45.0% | |
| GCCGTCGAACAATGAATTGT+CGG | - | chr5.2:4532884-4532903 | MS.gene09953:intron | 45.0% | |
| GCTCGGGTGTTCTGTAATTA+TGG | + | chr5.2:4531091-4531110 | None:intergenic | 45.0% | |
| GGAGAAGAAAGGGGAATTGA+CGG | + | chr5.2:4532572-4532591 | None:intergenic | 45.0% | |
| GTATTGTTATAAGCAGGGGC+GGG | - | chr5.2:4530554-4530573 | MS.gene09953:intron | 45.0% | |
| GTCGAACAATGAATTGTCGG+TGG | - | chr5.2:4532887-4532906 | MS.gene09953:intron | 45.0% | |
| GTGAATTGTATAGGCTCGAG+TGG | + | chr5.2:4529915-4529934 | None:intergenic | 45.0% | |
| GTGTTCCTGCTATGGAAGAA+TGG | - | chr5.2:4533470-4533489 | MS.gene09953:CDS | 45.0% | |
| GTTCTCCATTCTTCCATAGC+AGG | + | chr5.2:4533478-4533497 | None:intergenic | 45.0% | |
| TACCTGGCCATGATAACATG+TGG | - | chr5.2:4531543-4531562 | MS.gene09953:intron | 45.0% | |
| TAGGAAAACGCATCCGACAA+CGG | + | chr5.2:4532618-4532637 | None:intergenic | 45.0% | |
| TATTGTTATAAGCAGGGGCG+GGG | - | chr5.2:4530555-4530574 | MS.gene09953:intron | 45.0% | |
| TCAAAACCTCTCCATGACTC+GGG | + | chr5.2:4530026-4530045 | None:intergenic | 45.0% | |
| TCAAGTTACAGCCACTCTAC+CGG | + | chr5.2:4532767-4532786 | None:intergenic | 45.0% | |
| TCCTATGAGCATAGCTCAGT+TGG | - | chr5.2:4530522-4530541 | MS.gene09953:intron | 45.0% | |
| TCGAGAAATATCAACCGCAC+TGG | + | chr5.2:4531453-4531472 | None:intergenic | 45.0% | |
| TGAGACTTATCGTGACGAGT+GGG | - | chr5.2:4533540-4533559 | MS.gene09953:CDS | 45.0% | |
| TGCAGTGGGACTACAATAAC+TGG | - | chr5.2:4533431-4533450 | MS.gene09953:CDS | 45.0% | |
| TGCTTGACAGCAGTGAATCA+CGG | - | chr5.2:4533176-4533195 | MS.gene09953:CDS | 45.0% | |
| TGTTCGATGGTGCGTTACAT+TGG | + | chr5.2:4531328-4531347 | None:intergenic | 45.0% | |
| TGTTTGAACTGCAGAGCAAG+TGG | - | chr5.2:4532217-4532236 | MS.gene09953:CDS | 45.0% | |
| TTCGAGCGAGGAGAAGAATT+GGG | - | chr5.2:4529820-4529839 | MS.gene09953:CDS | 45.0% | |
| TTTGGTGAGGTTGAAGACAG+AGG | - | chr5.2:4530086-4530105 | MS.gene09953:intron | 45.0% | |
| ! | AATTTGCCTCGGGAGAGTAT+GGG | - | chr5.2:4529943-4529962 | MS.gene09953:intron | 45.0% |
| ! | CATCTCCTCTTCTGAAGGAA+GGG | + | chr5.2:4532271-4532290 | None:intergenic | 45.0% |
| ! | GGAGGTTGTTGATAAAACGG+CGG | + | chr5.2:4532655-4532674 | None:intergenic | 45.0% |
| ! | GGTTGATATTTCTCGAGACG+TGG | - | chr5.2:4531457-4531476 | MS.gene09953:intron | 45.0% |
| ! | TCATCTCCTCTTCTGAAGGA+AGG | + | chr5.2:4532272-4532291 | None:intergenic | 45.0% |
| !! | TCACCACACCATTGGTTTCA+AGG | + | chr5.2:4532089-4532108 | None:intergenic | 45.0% |
| !!! | AGAAATAATTTTTTTAAAAA+AGG | - | chr5.2:4530967-4530986 | MS.gene09953:CDS | 5.0% |
| !!! | TTATATCAAATTTTTTTATT+AGG | - | chr5.2:4532403-4532422 | MS.gene09953:intron | 5.0% |
| AAGACAGAGGTGGTGTTTGC+TGG | - | chr5.2:4530099-4530118 | MS.gene09953:intron | 50.0% | |
| ACTCCGAACCAATTTGCCTC+GGG | - | chr5.2:4529933-4529952 | MS.gene09953:intron | 50.0% | |
| AGACAGAGGTGGTGTTTGCT+GGG | - | chr5.2:4530100-4530119 | MS.gene09953:intron | 50.0% | |
| AGCCACATGTTATCATGGCC+AGG | + | chr5.2:4531548-4531567 | None:intergenic | 50.0% | |
| AGTGGATAAGCATCCGGTTC+GGG | + | chr5.2:4529897-4529916 | None:intergenic | 50.0% | |
| AGTGGGTCGGATTCTATCTC+TGG | + | chr5.2:4529865-4529884 | None:intergenic | 50.0% | |
| ATCTACGGTCACCACACCAT+TGG | + | chr5.2:4532097-4532116 | None:intergenic | 50.0% | |
| ATGAGCATAGCTCAGTTGGC+TGG | - | chr5.2:4530526-4530545 | MS.gene09953:intron | 50.0% | |
| ATTAGCTGGTAATTCGGCGG+CGG | - | chr5.2:4532724-4532743 | MS.gene09953:intron | 50.0% | |
| ATTGGACACGGACGTCACTT+TGG | + | chr5.2:4531310-4531329 | None:intergenic | 50.0% | |
| CAAGTAGTAGTCTTCGAGCG+AGG | - | chr5.2:4529808-4529827 | MS.gene09953:CDS | 50.0% | |
| CAATTTGCCTCGGGAGAGTA+TGG | - | chr5.2:4529942-4529961 | MS.gene09953:intron | 50.0% | |
| CACTCCGAACCAATTTGCCT+CGG | - | chr5.2:4529932-4529951 | MS.gene09953:intron | 50.0% | |
| CACTCGTCACGATAAGTCTC+AGG | + | chr5.2:4533541-4533560 | None:intergenic | 50.0% | |
| CAGGCATTAATGCATGGCCA+GGG | - | chr5.2:4531051-4531070 | MS.gene09953:CDS | 50.0% | |
| CATACTCTCCCGAGGCAAAT+TGG | + | chr5.2:4529944-4529963 | None:intergenic | 50.0% | |
| CATTGCCCTTCCTTCAGAAG+AGG | - | chr5.2:4532263-4532282 | MS.gene09953:intron | 50.0% | |
| CCGAGACTTCCCAATATTCC+TGG | - | chr5.2:4530228-4530247 | MS.gene09953:intron | 50.0% | |
| CTGAGACTTATCGTGACGAG+TGG | - | chr5.2:4533539-4533558 | MS.gene09953:CDS | 50.0% | |
| CTTCGAGCGAGGAGAAGAAT+TGG | - | chr5.2:4529819-4529838 | MS.gene09953:CDS | 50.0% | |
| GAGAAGAATTGGGCGGTTCA+TGG | - | chr5.2:4529830-4529849 | MS.gene09953:CDS | 50.0% | |
| GAGATAGAATCCGACCCACT+CGG | - | chr5.2:4529865-4529884 | MS.gene09953:CDS | 50.0% | |
| GAGATCTAGATCGGTGGAGA+GGG | - | chr5.2:4530149-4530168 | MS.gene09953:intron | 50.0% | |
| GAGTGGATAAGCATCCGGTT+CGG | + | chr5.2:4529898-4529917 | None:intergenic | 50.0% | |
| GCCAACTGAGCTATGCTCAT+AGG | + | chr5.2:4530526-4530545 | None:intergenic | 50.0% | |
| GCTCCATGGCTTTCCTTTGT+TGG | - | chr5.2:4532165-4532184 | MS.gene09953:intron | 50.0% | |
| GGCGGTGACAACACAGATTT+AGG | + | chr5.2:4532637-4532656 | None:intergenic | 50.0% | |
| TCAGGCATTAATGCATGGCC+AGG | - | chr5.2:4531050-4531069 | MS.gene09953:CDS | 50.0% | |
| TCATAATATGGGCACGGGCT+CGG | - | chr5.2:4532353-4532372 | MS.gene09953:intron | 50.0% | |
| TCATCAACAACCGCCGTTGT+CGG | - | chr5.2:4532602-4532621 | MS.gene09953:intron | 50.0% | |
| TCTCCCGAGGCAAATTGGTT+CGG | + | chr5.2:4529939-4529958 | None:intergenic | 50.0% | |
| TGAGATCTAGATCGGTGGAG+AGG | - | chr5.2:4530148-4530167 | MS.gene09953:intron | 50.0% | |
| TGAGCATAGCTCAGTTGGCT+GGG | - | chr5.2:4530527-4530546 | MS.gene09953:intron | 50.0% | |
| TGGAAGAAGAAGGGACGACA+AGG | - | chr5.2:4533046-4533065 | MS.gene09953:intron | 50.0% | |
| TGGCTATGCATTTGCTTCCC+TGG | + | chr5.2:4531071-4531090 | None:intergenic | 50.0% | |
| TGTAGAAGGTTCCCGAGTCA+TGG | - | chr5.2:4530012-4530031 | MS.gene09953:intron | 50.0% | |
| ! | AAAGGGGAATTGACGGGTCT+AGG | + | chr5.2:4532565-4532584 | None:intergenic | 50.0% |
| ! | AAGGGGAATTGACGGGTCTA+GGG | + | chr5.2:4532564-4532583 | None:intergenic | 50.0% |
| AAGGTTCCCGAGTCATGGAG+AGG | - | chr5.2:4530017-4530036 | MS.gene09953:intron | 55.0% | |
| ACCGGGAAGGTGGAGAAGAA+AGG | + | chr5.2:4532583-4532602 | None:intergenic | 55.0% | |
| AGAATCCGACCCACTCGGTT+TGG | - | chr5.2:4529870-4529889 | MS.gene09953:intron | 55.0% | |
| ATCGGTGGAGAGGGAATGTG+TGG | - | chr5.2:4530158-4530177 | MS.gene09953:intron | 55.0% | |
| CAACAACCTCCTGAGACCGT+TGG | - | chr5.2:4532664-4532683 | MS.gene09953:intron | 55.0% | |
| CCCTTTCTTCTCCACCTTCC+CGG | - | chr5.2:4532579-4532598 | MS.gene09953:intron | 55.0% | |
| CCGGGAAGGTGGAGAAGAAA+GGG | + | chr5.2:4532582-4532601 | None:intergenic | 55.0% | |
| CGGGAAGGTGGAGAAGAAAG+GGG | + | chr5.2:4532581-4532600 | None:intergenic | 55.0% | |
| CTGCAGAGCAAGTGGATAGC+TGG | - | chr5.2:4532225-4532244 | MS.gene09953:CDS | 55.0% | |
| GAAAACGCATCCGACAACGG+CGG | + | chr5.2:4532615-4532634 | None:intergenic | 55.0% | |
| GAAAGCCATGGAGCTAACGC+CGG | + | chr5.2:4532159-4532178 | None:intergenic | 55.0% | |
| GACGGTGAGATCTAGATCGG+TGG | - | chr5.2:4530143-4530162 | MS.gene09953:intron | 55.0% | |
| GAGCGAGGAGAAGAATTGGG+CGG | - | chr5.2:4529823-4529842 | MS.gene09953:CDS | 55.0% | |
| GGCTCGAGTGGATAAGCATC+CGG | + | chr5.2:4529903-4529922 | None:intergenic | 55.0% | |
| GGGAAAGGAGCAACCTTCCA+AGG | + | chr5.2:4532195-4532214 | None:intergenic | 55.0% | |
| GGGTGAAGGTGGGAAATGGA+CGG | - | chr5.2:4530125-4530144 | MS.gene09953:intron | 55.0% | |
| GGTGAGGTTGAAGACAGAGG+TGG | - | chr5.2:4530089-4530108 | MS.gene09953:intron | 55.0% | |
| TCAGTGCGGTGTTCCTGCTA+TGG | - | chr5.2:4533462-4533481 | MS.gene09953:CDS | 55.0% | |
| ! | AGGGGAATTGACGGGTCTAG+GGG | + | chr5.2:4532563-4532582 | None:intergenic | 55.0% |
| ! | GACAGAGGTGGTGTTTGCTG+GGG | - | chr5.2:4530101-4530120 | MS.gene09953:intron | 55.0% |
| ! | GGGTGTGAGAAGTGGTGTTG+CGG | + | chr5.2:4529716-4529735 | None:intergenic | 55.0% |
| !! | AACGGCGGTTGTTGATGACC+GGG | + | chr5.2:4532600-4532619 | None:intergenic | 55.0% |
| !! | AATAGGTGGTGCTGCCAGTG+CGG | - | chr5.2:4531436-4531455 | MS.gene09953:intron | 55.0% |
| !! | CAACGGCGGTTGTTGATGAC+CGG | + | chr5.2:4532601-4532620 | None:intergenic | 55.0% |
| !! | GTGAGAAGTGGTGTTGCGGT+GGG | + | chr5.2:4529712-4529731 | None:intergenic | 55.0% |
| !! | GTTGTTGATGACCGGGAAGG+TGG | + | chr5.2:4532593-4532612 | None:intergenic | 55.0% |
| !! | TGTGAGAAGTGGTGTTGCGG+TGG | + | chr5.2:4529713-4529732 | None:intergenic | 55.0% |
| AATCCTCCGCCAACGGTCTC+AGG | + | chr5.2:4532676-4532695 | None:intergenic | 60.0% | |
| CAACCTCCTGAGACCGTTGG+CGG | - | chr5.2:4532667-4532686 | MS.gene09953:intron | 60.0% | |
| CGGAAACCCATACTCTCCCG+AGG | + | chr5.2:4529952-4529971 | None:intergenic | 60.0% | |
| GGGGAACAATCCTCCGCCAA+CGG | + | chr5.2:4532683-4532702 | None:intergenic | 60.0% | |
| GGGTGGGTGAAGGTGGGAAA+TGG | - | chr5.2:4530121-4530140 | MS.gene09953:intron | 60.0% | |
| GGTTCGGGTCCAAACCGAGT+GGG | + | chr5.2:4529882-4529901 | None:intergenic | 60.0% | |
| TTCCACCGGCGTTAGCTCCA+TGG | - | chr5.2:4532151-4532170 | MS.gene09953:intron | 60.0% | |
| TTGCTGGGGTGGGTGAAGGT+GGG | - | chr5.2:4530115-4530134 | MS.gene09953:intron | 60.0% | |
| TTTGCTGGGGTGGGTGAAGG+TGG | - | chr5.2:4530114-4530133 | MS.gene09953:intron | 60.0% | |
| ! | AGAGGTGGTGTTTGCTGGGG+TGG | - | chr5.2:4530104-4530123 | MS.gene09953:intron | 60.0% |
| ! | GAGGTGGTGTTTGCTGGGGT+GGG | - | chr5.2:4530105-4530124 | MS.gene09953:intron | 60.0% |
| ! | GCGTGCTGCTACTAAGCCTC+CGG | + | chr5.2:4529767-4529786 | None:intergenic | 60.0% |
| ! | GTGTTTGCTGGGGTGGGTGA+AGG | - | chr5.2:4530111-4530130 | MS.gene09953:intron | 60.0% |
| !! | CACTCGGTTTGGACCCGAAC+CGG | - | chr5.2:4529881-4529900 | MS.gene09953:intron | 60.0% |
| !! | GCGGTTGTTGATGACCGGGA+AGG | + | chr5.2:4532596-4532615 | None:intergenic | 60.0% |
| ACTTCTCACACCCCGCCACG+TGG | - | chr5.2:4529723-4529742 | MS.gene09953:CDS | 65.0% | |
| AGCCATGGAGCTAACGCCGG+TGG | + | chr5.2:4532156-4532175 | None:intergenic | 65.0% | |
| CACGGGCTCGGCCAATGTTC+AGG | - | chr5.2:4532365-4532384 | MS.gene09953:intron | 65.0% | |
| CGGGTCCAAACCGAGTGGGT+CGG | + | chr5.2:4529878-4529897 | None:intergenic | 65.0% | |
| TGCTACTAAGCCTCCGGCGC+CGG | + | chr5.2:4529761-4529780 | None:intergenic | 65.0% | |
| ! | ACGTGGCGGGGTGTGAGAAG+TGG | + | chr5.2:4529724-4529743 | None:intergenic | 65.0% |
| ! | CGGTTCGGGTCCAAACCGAG+TGG | + | chr5.2:4529883-4529902 | None:intergenic | 65.0% |
| CACGTGGCAGTCATCGGCGC+CGG | - | chr5.2:4529739-4529758 | MS.gene09953:CDS | 70.0% | |
| CCCCGCCACGTGGCAGTCAT+CGG | - | chr5.2:4529733-4529752 | MS.gene09953:CDS | 70.0% | |
| CCGATGACTGCCACGTGGCG+GGG | + | chr5.2:4529736-4529755 | None:intergenic | 70.0% | |
| CCTCCGCCAACGGTCTCAGG+AGG | + | chr5.2:4532673-4532692 | None:intergenic | 70.0% | |
| CCTCCTGAGACCGTTGGCGG+AGG | - | chr5.2:4532670-4532689 | MS.gene09953:intron | 70.0% | |
| CGCCGATGACTGCCACGTGG+CGG | + | chr5.2:4529738-4529757 | None:intergenic | 70.0% | |
| GCACGCGAGCTCCGACGAGA+AGG | - | chr5.2:4529781-4529800 | MS.gene09953:CDS | 70.0% | |
| GCCGATGACTGCCACGTGGC+GGG | + | chr5.2:4529737-4529756 | None:intergenic | 70.0% | |
| GCAGGGGCGGGGTCTGAACC+CGG | - | chr5.2:4530566-4530585 | MS.gene09953:intron | 75.0% | |
| !! | CGGCGCCGATGACTGCCACG+TGG | + | chr5.2:4529741-4529760 | None:intergenic | 75.0% |
| !!! | GCAGTCATCGGCGCCGGCGC+CGG | - | chr5.2:4529745-4529764 | MS.gene09953:CDS | 80.0% |
| !!! | GTCATCGGCGCCGGCGCCGG+AGG | - | chr5.2:4529748-4529767 | MS.gene09953:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 4529706 | 4533618 | 4529706 | ID=MS.gene09953 |
| chr5.2 | mRNA | 4529706 | 4533618 | 4529706 | ID=MS.gene09953.t1;Parent=MS.gene09953 |
| chr5.2 | exon | 4533075 | 4533618 | 4533075 | ID=MS.gene09953.t1.exon1;Parent=MS.gene09953.t1 |
| chr5.2 | CDS | 4533075 | 4533618 | 4533075 | ID=cds.MS.gene09953.t1;Parent=MS.gene09953.t1 |
| chr5.2 | exon | 4532200 | 4532270 | 4532200 | ID=MS.gene09953.t1.exon2;Parent=MS.gene09953.t1 |
| chr5.2 | CDS | 4532200 | 4532270 | 4532200 | ID=cds.MS.gene09953.t1;Parent=MS.gene09953.t1 |
| chr5.2 | exon | 4531747 | 4531899 | 4531747 | ID=MS.gene09953.t1.exon3;Parent=MS.gene09953.t1 |
| chr5.2 | CDS | 4531747 | 4531899 | 4531747 | ID=cds.MS.gene09953.t1;Parent=MS.gene09953.t1 |
| chr5.2 | exon | 4531549 | 4531631 | 4531549 | ID=MS.gene09953.t1.exon4;Parent=MS.gene09953.t1 |
| chr5.2 | CDS | 4531549 | 4531631 | 4531549 | ID=cds.MS.gene09953.t1;Parent=MS.gene09953.t1 |
| chr5.2 | exon | 4530938 | 4531259 | 4530938 | ID=MS.gene09953.t1.exon5;Parent=MS.gene09953.t1 |
| chr5.2 | CDS | 4530938 | 4531259 | 4530938 | ID=cds.MS.gene09953.t1;Parent=MS.gene09953.t1 |
| chr5.2 | exon | 4529706 | 4529888 | 4529706 | ID=MS.gene09953.t1.exon6;Parent=MS.gene09953.t1 |
| chr5.2 | CDS | 4529706 | 4529888 | 4529706 | ID=cds.MS.gene09953.t1;Parent=MS.gene09953.t1 |
| Gene Sequence |
| Protein sequence |
