Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061805.t1 | XP_013446774.1 | 96.6 | 792 | 27 | 0 | 1 | 792 | 44 | 835 | 0.00E+00 | 1419.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061805.t1 | Q6F353 | 73.2 | 799 | 195 | 5 | 1 | 792 | 44 | 830 | 0.0e+00 | 1125.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061805.t1 | A0A072TUF1 | 96.6 | 792 | 27 | 0 | 1 | 792 | 44 | 835 | 0.0e+00 | 1419.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049328 | MS.gene061805 | 0.826574 | 2.52E-54 | -1.69E-46 |
MS.gene049397 | MS.gene061805 | 0.866565 | 2.60E-65 | -1.69E-46 |
MS.gene049418 | MS.gene061805 | 0.822249 | 2.62E-53 | -1.69E-46 |
MS.gene049596 | MS.gene061805 | 0.817637 | 2.97E-52 | -1.69E-46 |
MS.gene049622 | MS.gene061805 | 0.809579 | 1.76E-50 | -1.69E-46 |
MS.gene04985 | MS.gene061805 | 0.863799 | 1.92E-64 | -1.69E-46 |
MS.gene049989 | MS.gene061805 | 0.908376 | 1.83E-81 | -1.69E-46 |
MS.gene050297 | MS.gene061805 | 0.915604 | 4.83E-85 | -1.69E-46 |
MS.gene050310 | MS.gene061805 | 0.846921 | 1.60E-59 | -1.69E-46 |
MS.gene050648 | MS.gene061805 | 0.887284 | 1.63E-72 | -1.69E-46 |
MS.gene051067 | MS.gene061805 | 0.856936 | 2.30E-62 | -1.69E-46 |
MS.gene051094 | MS.gene061805 | 0.845182 | 4.76E-59 | -1.69E-46 |
MS.gene051263 | MS.gene061805 | 0.863779 | 1.95E-64 | -1.69E-46 |
MS.gene051478 | MS.gene061805 | 0.85418 | 1.46E-61 | -1.69E-46 |
MS.gene051629 | MS.gene061805 | 0.849174 | 3.83E-60 | -1.69E-46 |
MS.gene051648 | MS.gene061805 | 0.810673 | 1.03E-50 | -1.69E-46 |
MS.gene051671 | MS.gene061805 | 0.832592 | 8.66E-56 | -1.69E-46 |
MS.gene051698 | MS.gene061805 | 0.814236 | 1.71E-51 | -1.69E-46 |
MS.gene051742 | MS.gene061805 | 0.802724 | 4.90E-49 | -1.69E-46 |
MS.gene052367 | MS.gene061805 | 0.853817 | 1.86E-61 | -1.69E-46 |
MS.gene052731 | MS.gene061805 | 0.818363 | 2.04E-52 | -1.69E-46 |
MS.gene052732 | MS.gene061805 | 0.81896 | 1.49E-52 | -1.69E-46 |
MS.gene053144 | MS.gene061805 | 0.806489 | 8.03E-50 | -1.69E-46 |
MS.gene053416 | MS.gene061805 | 0.870246 | 1.69E-66 | -1.69E-46 |
MS.gene053417 | MS.gene061805 | 0.871117 | 8.73E-67 | -1.69E-46 |
MS.gene05369 | MS.gene061805 | 0.820393 | 7.02E-53 | -1.69E-46 |
MS.gene053929 | MS.gene061805 | 0.816603 | 5.08E-52 | -1.69E-46 |
MS.gene054584 | MS.gene061805 | 0.810613 | 1.06E-50 | -1.69E-46 |
MS.gene054585 | MS.gene061805 | 0.804679 | 1.92E-49 | -1.69E-46 |
MS.gene054643 | MS.gene061805 | 0.841121 | 5.76E-58 | -1.69E-46 |
MS.gene055411 | MS.gene061805 | 0.814526 | 1.47E-51 | -1.69E-46 |
MS.gene055537 | MS.gene061805 | 0.810438 | 1.15E-50 | -1.69E-46 |
MS.gene055764 | MS.gene061805 | 0.829088 | 6.26E-55 | -1.69E-46 |
MS.gene055781 | MS.gene061805 | 0.815647 | 8.31E-52 | -1.69E-46 |
MS.gene055957 | MS.gene061805 | 0.845561 | 3.76E-59 | -1.69E-46 |
MS.gene056041 | MS.gene061805 | 0.827141 | 1.84E-54 | -1.69E-46 |
MS.gene056169 | MS.gene061805 | 0.817146 | 3.84E-52 | -1.69E-46 |
MS.gene056228 | MS.gene061805 | 0.840719 | 7.34E-58 | -1.69E-46 |
MS.gene056335 | MS.gene061805 | 0.808941 | 2.42E-50 | -1.69E-46 |
MS.gene056520 | MS.gene061805 | 0.822843 | 1.91E-53 | -1.69E-46 |
MS.gene056526 | MS.gene061805 | 0.819768 | 9.76E-53 | -1.69E-46 |
MS.gene057004 | MS.gene061805 | 0.832638 | 8.43E-56 | -1.69E-46 |
MS.gene057483 | MS.gene061805 | 0.844808 | 6.01E-59 | -1.69E-46 |
MS.gene058196 | MS.gene061805 | 0.845185 | 4.75E-59 | -1.69E-46 |
MS.gene058197 | MS.gene061805 | 0.87285 | 2.32E-67 | -1.69E-46 |
MS.gene058198 | MS.gene061805 | 0.874175 | 8.30E-68 | -1.69E-46 |
MS.gene05870 | MS.gene061805 | 0.802338 | 5.88E-49 | -1.69E-46 |
MS.gene058818 | MS.gene061805 | 0.85796 | 1.14E-62 | -1.69E-46 |
MS.gene058844 | MS.gene061805 | 0.825167 | 5.43E-54 | -1.69E-46 |
MS.gene059300 | MS.gene061805 | 0.90247 | 9.38E-79 | -1.69E-46 |
MS.gene060473 | MS.gene061805 | 0.850014 | 2.23E-60 | -1.69E-46 |
MS.gene060565 | MS.gene061805 | 0.850904 | 1.26E-60 | -1.69E-46 |
MS.gene06057 | MS.gene061805 | 0.909527 | 5.16E-82 | -1.69E-46 |
MS.gene061260 | MS.gene061805 | 0.862262 | 5.74E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061805.t1 | MTR_8g090000 | 99.369 | 792 | 5 | 0 | 1 | 792 | 44 | 835 | 0.0 | 1630 |
MS.gene061805.t1 | MTR_2g437540 | 76.280 | 801 | 144 | 5 | 1 | 789 | 45 | 811 | 0.0 | 1246 |
MS.gene061805.t1 | MTR_4g071090 | 36.177 | 586 | 324 | 10 | 34 | 610 | 199 | 743 | 8.92e-116 | 370 |
MS.gene061805.t1 | MTR_7g109480 | 37.963 | 540 | 283 | 9 | 76 | 609 | 145 | 638 | 3.47e-114 | 363 |
MS.gene061805.t1 | MTR_4g116870 | 33.959 | 639 | 348 | 12 | 9 | 619 | 66 | 658 | 2.95e-101 | 329 |
MS.gene061805.t1 | MTR_4g096700 | 32.421 | 694 | 356 | 15 | 37 | 670 | 67 | 707 | 4.04e-99 | 325 |
MS.gene061805.t1 | MTR_4g122270 | 34.564 | 596 | 320 | 11 | 38 | 614 | 283 | 827 | 6.82e-97 | 322 |
MS.gene061805.t1 | MTR_7g100680 | 31.313 | 594 | 318 | 13 | 76 | 610 | 143 | 705 | 4.85e-88 | 296 |
MS.gene061805.t1 | MTR_2g009190 | 34.358 | 553 | 298 | 16 | 70 | 610 | 116 | 615 | 1.49e-79 | 269 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061805.t1 | AT5G44635 | 73.897 | 793 | 200 | 3 | 1 | 792 | 45 | 831 | 0.0 | 1224 |
MS.gene061805.t1 | AT5G44635 | 71.673 | 819 | 199 | 4 | 1 | 792 | 45 | 857 | 0.0 | 1212 |
MS.gene061805.t1 | AT4G02060 | 38.235 | 544 | 284 | 9 | 76 | 613 | 143 | 640 | 9.34e-116 | 367 |
MS.gene061805.t1 | AT4G02060 | 38.235 | 544 | 284 | 9 | 76 | 613 | 143 | 640 | 9.34e-116 | 367 |
MS.gene061805.t1 | AT2G16440 | 36.610 | 590 | 335 | 10 | 34 | 610 | 185 | 748 | 1.01e-115 | 370 |
MS.gene061805.t1 | AT2G07690 | 36.655 | 562 | 295 | 9 | 76 | 619 | 134 | 652 | 2.66e-100 | 327 |
MS.gene061805.t1 | AT5G46280 | 34.615 | 598 | 295 | 9 | 68 | 619 | 96 | 643 | 1.05e-99 | 324 |
MS.gene061805.t1 | AT2G07690 | 36.823 | 554 | 289 | 9 | 84 | 619 | 140 | 650 | 3.24e-99 | 323 |
MS.gene061805.t1 | AT5G46280 | 34.615 | 598 | 295 | 9 | 68 | 619 | 96 | 643 | 5.81e-99 | 324 |
MS.gene061805.t1 | AT1G44900 | 33.760 | 625 | 342 | 12 | 11 | 614 | 258 | 831 | 9.91e-99 | 327 |
MS.gene061805.t1 | AT1G44900 | 33.760 | 625 | 342 | 12 | 11 | 614 | 256 | 829 | 1.16e-98 | 327 |
MS.gene061805.t1 | AT5G46280 | 34.752 | 564 | 272 | 8 | 77 | 594 | 105 | 618 | 3.09e-96 | 313 |
MS.gene061805.t1 | AT3G09660 | 31.833 | 600 | 328 | 15 | 63 | 610 | 131 | 701 | 9.01e-91 | 302 |
MS.gene061805.t1 | AT3G09660 | 32.161 | 597 | 327 | 15 | 63 | 610 | 131 | 698 | 1.09e-90 | 303 |
MS.gene061805.t1 | AT3G09660 | 31.833 | 600 | 328 | 15 | 63 | 610 | 131 | 701 | 1.72e-90 | 302 |
MS.gene061805.t1 | AT5G46280 | 35.078 | 516 | 239 | 8 | 77 | 546 | 105 | 570 | 3.66e-88 | 290 |
MS.gene061805.t1 | AT2G14050 | 31.229 | 602 | 338 | 21 | 9 | 594 | 59 | 600 | 2.97e-73 | 252 |
MS.gene061805.t1 | AT2G14050 | 31.229 | 602 | 338 | 21 | 9 | 594 | 59 | 600 | 3.90e-73 | 251 |
Find 176 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTATAATTGCTTTAATT+TGG | 0.072017 | 4.3:-10437176 | None:intergenic |
ATACAAAACTCTCCAGTTTC+TGG | 0.160572 | 4.3:-10434760 | None:intergenic |
TGTGAGGGGCCTTAGGGCTT+TGG | 0.214668 | 4.3:+10433802 | MS.gene061805:CDS |
CTCTATAATTGCTTTAATTT+GGG | 0.252599 | 4.3:-10437175 | None:intergenic |
CAACGCAAGGGTGCTTCATC+TGG | 0.270964 | 4.3:+10433770 | MS.gene061805:CDS |
GTGAGGGGCCTTAGGGCTTT+GGG | 0.275142 | 4.3:+10433803 | MS.gene061805:CDS |
AGCAACGGGATTTGATTAAA+TGG | 0.286323 | 4.3:+10437088 | MS.gene061805:CDS |
TATTAATCAACAACATAATT+AGG | 0.298193 | 4.3:-10437405 | None:intergenic |
CTCTCCAGTTTCTGGTTCCT+TGG | 0.319235 | 4.3:-10434752 | None:intergenic |
TGCTGCAAACTTCTATAATA+AGG | 0.322371 | 4.3:+10436359 | MS.gene061805:CDS |
GCAACGTTGATATCCTTGTT+AGG | 0.332960 | 4.3:-10432889 | None:intergenic |
ATGAAGGTGTGAGGGGCCTT+AGG | 0.335308 | 4.3:+10433795 | MS.gene061805:CDS |
CATGAAGGCATCAGCCTTAG+AGG | 0.337585 | 4.3:+10434510 | MS.gene061805:CDS |
GACATAAACGTTTGTATTGT+TGG | 0.339761 | 4.3:+10434534 | MS.gene061805:CDS |
CTCCATAACAAACCTCTTGC+AGG | 0.345294 | 4.3:-10432836 | None:intergenic |
GTTAAAACCTTCTTGCATTA+CGG | 0.350902 | 4.3:-10436804 | None:intergenic |
AATTGTCATACCTGATATAT+TGG | 0.355144 | 4.3:+10433700 | MS.gene061805:CDS |
GACAATTGGAATGTTATAGA+AGG | 0.359993 | 4.3:-10432911 | None:intergenic |
TGGTAATCTGTAACATCGTC+TGG | 0.365977 | 4.3:-10435853 | None:intergenic |
TGAATATACCTCTTGACAAT+TGG | 0.372562 | 4.3:-10432925 | None:intergenic |
AATCAGTAAATTTGCTCTCT+TGG | 0.374951 | 4.3:-10433429 | None:intergenic |
TGGCTCTCTGCCTAGGTCAT+TGG | 0.375729 | 4.3:+10433495 | MS.gene061805:CDS |
GGTAGGCTTGTATCTGTAAC+AGG | 0.380034 | 4.3:+10433119 | MS.gene061805:CDS |
GGCAGTTGGAAGCTTTAATC+AGG | 0.381387 | 4.3:+10436175 | MS.gene061805:CDS |
ATTGCAGGAAGTGGCTTAGC+TGG | 0.382001 | 4.3:+10437060 | MS.gene061805:intron |
CTTGCCGCTGCCAACCCTGC+TGG | 0.383099 | 4.3:+10435645 | MS.gene061805:CDS |
CCAGATGTATACACAGATCT+TGG | 0.385985 | 4.3:-10434691 | None:intergenic |
ACAAGCTTGGTGAAGAAATC+TGG | 0.391646 | 4.3:-10434399 | None:intergenic |
AAACGTTTATGTCCCCTCTA+AGG | 0.400315 | 4.3:-10434524 | None:intergenic |
CAAGCAGCATCAGAAGCTGC+TGG | 0.400775 | 4.3:+10437330 | MS.gene061805:CDS |
GTTGCCAAGGAACCAGAAAC+TGG | 0.401643 | 4.3:+10434748 | MS.gene061805:CDS |
TTCCACCGGCTATACTTTCA+AGG | 0.402725 | 4.3:+10435800 | MS.gene061805:CDS |
GGCCATTGCAAGGTGTCATC+TGG | 0.403603 | 4.3:+10436206 | MS.gene061805:CDS |
TGCCTGCAAGAGGTTTGTTA+TGG | 0.403641 | 4.3:+10432834 | MS.gene061805:CDS |
CTGTTGTTACATGTAGCATT+TGG | 0.405390 | 4.3:-10433385 | None:intergenic |
GATTTAACAGGCTCAGGAAC+TGG | 0.406162 | 4.3:+10434350 | MS.gene061805:intron |
CCAAGATCTGTGTATACATC+TGG | 0.406994 | 4.3:+10434691 | MS.gene061805:CDS |
CCAAATTAAAGCAATTATAG+AGG | 0.410633 | 4.3:+10437176 | MS.gene061805:CDS |
AAGAGAGCAAATTTACTGAT+TGG | 0.413990 | 4.3:+10433431 | MS.gene061805:CDS |
TTGCAGGCATTCTGCAAGTA+AGG | 0.418482 | 4.3:-10432820 | None:intergenic |
GAAGCCAACGCCAATATATC+AGG | 0.418612 | 4.3:-10433710 | None:intergenic |
CTAGACACTTGAAAGTTCCT+TGG | 0.427198 | 4.3:-10433181 | None:intergenic |
CGACATTCTGATCTCTCTCC+AGG | 0.428347 | 4.3:-10433734 | None:intergenic |
GGAAAGTCATCATCTGCTGC+TGG | 0.432241 | 4.3:+10434712 | MS.gene061805:CDS |
CAACGTTGATATCCTTGTTA+GGG | 0.439564 | 4.3:-10432888 | None:intergenic |
AAGGTGTCATCTGGATAATC+AGG | 0.447002 | 4.3:+10436215 | MS.gene061805:CDS |
AAGACGCATGACAAGGGCCT+TGG | 0.449057 | 4.3:-10436765 | None:intergenic |
TGAAGGTGTGAGGGGCCTTA+GGG | 0.453292 | 4.3:+10433796 | MS.gene061805:CDS |
AAAATCAATGAACATGGTGT+TGG | 0.455706 | 4.3:-10432628 | None:intergenic |
TTGCATATCGGATGACAGTT+AGG | 0.457504 | 4.3:+10436154 | MS.gene061805:CDS |
ATATTGGCGTTGGCTTCCCC+TGG | 0.469082 | 4.3:+10433716 | MS.gene061805:CDS |
AGCTACACTTTCAACAAGCT+TGG | 0.470042 | 4.3:-10434412 | None:intergenic |
GTAGCATTTGGACAAATTGT+TGG | 0.476872 | 4.3:-10433373 | None:intergenic |
AAAGTTCCTTGGAGAAGCTC+AGG | 0.479407 | 4.3:-10433170 | None:intergenic |
TTATCATACCGTCCTCCAGC+AGG | 0.479460 | 4.3:-10435660 | None:intergenic |
CGTAGAGCTGATACAAATCC+TGG | 0.483403 | 4.3:+10436123 | MS.gene061805:CDS |
TGAGTTTCAAGATCAAGATA+TGG | 0.484842 | 4.3:+10436496 | MS.gene061805:CDS |
GAACATGTTATTACCTTCAG+TGG | 0.489503 | 4.3:-10435690 | None:intergenic |
AGGGTTGGCAGCGGCAAGAA+TGG | 0.489803 | 4.3:-10435640 | None:intergenic |
AGCTGGAAACTCTACTGCTC+AGG | 0.490744 | 4.3:+10436571 | MS.gene061805:CDS |
CTATCTCTGATGAATATTTG+AGG | 0.491103 | 4.3:+10432688 | MS.gene061805:CDS |
TCCTTCTTATGCTAATGAGT+GGG | 0.491510 | 4.3:+10434472 | MS.gene061805:CDS |
TGGCTACATCAGAGATTGGT+AGG | 0.504042 | 4.3:+10433102 | MS.gene061805:CDS |
TCAAGTGTCTAGAATGTGGT+GGG | 0.506639 | 4.3:+10433192 | MS.gene061805:CDS |
GTAGAAGAGAAATAGACATC+AGG | 0.506918 | 4.3:+10433973 | MS.gene061805:CDS |
CAAGATGGACATAAGAGATC+AGG | 0.507764 | 4.3:+10435460 | MS.gene061805:CDS |
AACGATGCTGATGGTCAAGC+TGG | 0.508931 | 4.3:+10436554 | MS.gene061805:CDS |
CTGATACAAATCCTGGCAGT+AGG | 0.511503 | 4.3:+10436130 | MS.gene061805:CDS |
CTGGCAGTAGGGTTGCATAT+CGG | 0.513097 | 4.3:+10436142 | MS.gene061805:CDS |
ATGAGATTGTAGAACATGCT+AGG | 0.515340 | 4.3:+10433533 | MS.gene061805:CDS |
GTCAGCAAGCATCAAAGCGC+CGG | 0.518628 | 4.3:-10435408 | None:intergenic |
CCCCACTCATTAGCATAAGA+AGG | 0.518823 | 4.3:-10434473 | None:intergenic |
CAAGATATGGACGAAGAAGC+AGG | 0.521607 | 4.3:+10436509 | MS.gene061805:CDS |
GTCAGATGCAAGAAAACTAC+TGG | 0.521796 | 4.3:+10436080 | MS.gene061805:CDS |
TCCTCCAGCAGGGTTGGCAG+CGG | 0.522459 | 4.3:-10435649 | None:intergenic |
ACTATTAGTATCACAAAAGC+AGG | 0.523615 | 4.3:+10435588 | MS.gene061805:CDS |
CAAATTTACTGATTGGCAAA+GGG | 0.525128 | 4.3:+10433438 | MS.gene061805:CDS |
TAATTACAGTTCCGTGGAGG+AGG | 0.526353 | 4.3:+10437137 | MS.gene061805:CDS |
CTTAGCTGGGATGAAGCAAC+GGG | 0.528915 | 4.3:+10437074 | MS.gene061805:CDS |
GCAAATTTACTGATTGGCAA+AGG | 0.529371 | 4.3:+10433437 | MS.gene061805:CDS |
AGAGCCAGCAGGTATCTCAT+TGG | 0.529743 | 4.3:-10433479 | None:intergenic |
CATACCTGATATATTGGCGT+TGG | 0.531733 | 4.3:+10433706 | MS.gene061805:CDS |
GAATTGGCTACATCAGAGAT+TGG | 0.532287 | 4.3:+10433098 | MS.gene061805:CDS |
CATTGATGAATTTGACAAGA+TGG | 0.532365 | 4.3:+10435445 | MS.gene061805:CDS |
GGTTGCAATTCATGAGGCTA+TGG | 0.533064 | 4.3:+10435557 | MS.gene061805:intron |
GGTGCTTCATCTGGGAATGA+AGG | 0.533732 | 4.3:+10433779 | MS.gene061805:CDS |
ATCTGGGAATGAAGGTGTGA+GGG | 0.535862 | 4.3:+10433787 | MS.gene061805:CDS |
TGCTAGAAATGATAGAACTT+TGG | 0.535930 | 4.3:+10437374 | MS.gene061805:CDS |
GCTTTGATGCTTGCTGACAA+TGG | 0.535963 | 4.3:+10435413 | MS.gene061805:CDS |
GAAAGTCATCATCTGCTGCT+GGG | 0.536220 | 4.3:+10434713 | MS.gene061805:CDS |
CGATATGCAACCCTACTGCC+AGG | 0.536524 | 4.3:-10436141 | None:intergenic |
TTGGCAAAGGGTCAGAATGC+AGG | 0.537253 | 4.3:+10433450 | MS.gene061805:CDS |
GCCGCTGCCAACCCTGCTGG+AGG | 0.537734 | 4.3:+10435648 | MS.gene061805:CDS |
TACCTGCTGGCTCTCTGCCT+AGG | 0.538550 | 4.3:+10433488 | MS.gene061805:CDS |
CAGGAAGCCGCTGGAACCAA+TGG | 0.541233 | 4.3:+10436590 | MS.gene061805:CDS |
CTCTGACTCCCAAAGCCCTA+AGG | 0.541676 | 4.3:-10433811 | None:intergenic |
GTACAATGTGGCTCTTCCAC+CGG | 0.541952 | 4.3:+10435786 | MS.gene061805:intron |
AACGCAAGGGTGCTTCATCT+GGG | 0.544757 | 4.3:+10433771 | MS.gene061805:CDS |
AGACATCAGGAATAGAAAGA+AGG | 0.549012 | 4.3:+10433986 | MS.gene061805:CDS |
TAGGGAAGCTTCTCAACGCA+AGG | 0.550312 | 4.3:+10433757 | MS.gene061805:CDS |
ATGAAGGCATCAGCCTTAGA+GGG | 0.551495 | 4.3:+10434511 | MS.gene061805:CDS |
CTGCCAACCCTGCTGGAGGA+CGG | 0.553709 | 4.3:+10435652 | MS.gene061805:CDS |
TGGATGAAGTTCAAAGAATG+AGG | 0.554379 | 4.3:+10434370 | MS.gene061805:CDS |
AGTTCTGCTGTAGTGAACGT+TGG | 0.559838 | 4.3:-10435928 | None:intergenic |
TTCAACTTTCGCCTCCTCCA+CGG | 0.560026 | 4.3:-10437148 | None:intergenic |
TGATCGTGATAGATGATGGC+AGG | 0.560237 | 4.3:+10437307 | MS.gene061805:CDS |
GAGAGAGATCAGAATGTCGT+AGG | 0.562049 | 4.3:+10433738 | MS.gene061805:CDS |
TTGCAGGAAGTGGCTTAGCT+GGG | 0.562532 | 4.3:+10437061 | MS.gene061805:intron |
TCGGATGACAGTTAGGCAGT+TGG | 0.563427 | 4.3:+10436161 | MS.gene061805:CDS |
CAGGATTTGTATCAGCTCTA+CGG | 0.565166 | 4.3:-10436122 | None:intergenic |
AATTGAGACTTTGCACAGCT+AGG | 0.566095 | 4.3:-10434561 | None:intergenic |
TTCTTTGTTTCAGTACAATG+TGG | 0.566629 | 4.3:+10435774 | MS.gene061805:intron |
CATTTGATCGTGATAGATGA+TGG | 0.566869 | 4.3:+10437303 | MS.gene061805:CDS |
ACTTGCAGAATGCCTGCAAG+AGG | 0.569621 | 4.3:+10432824 | MS.gene061805:CDS |
CTGTAACAGGAGTGGTAACA+AGG | 0.572546 | 4.3:+10433132 | MS.gene061805:CDS |
TCAAACCTTGAAAGTATAGC+CGG | 0.573082 | 4.3:-10435805 | None:intergenic |
GACCTAGGCAGAGAGCCAGC+AGG | 0.575423 | 4.3:-10433490 | None:intergenic |
GGAAGCTTTAATCAGGCTGT+CGG | 0.576059 | 4.3:+10436182 | MS.gene061805:CDS |
TAACTGATGAATACTTTCAA+AGG | 0.576649 | 4.3:+10436738 | MS.gene061805:CDS |
GCTTAGCTGGGATGAAGCAA+CGG | 0.577228 | 4.3:+10437073 | MS.gene061805:CDS |
ATACCGTCCTCCAGCAGGGT+TGG | 0.577304 | 4.3:-10435655 | None:intergenic |
GGTTTGTTCCAGATTTGTGA+TGG | 0.579414 | 4.3:+10433951 | MS.gene061805:intron |
AGAGAGATCAGAATGTCGTA+GGG | 0.583410 | 4.3:+10433739 | MS.gene061805:CDS |
GACATTCTGATCTCTCTCCA+GGG | 0.583538 | 4.3:-10433733 | None:intergenic |
TGATAAGTCTAAACCACTGA+AGG | 0.585685 | 4.3:+10435677 | MS.gene061805:CDS |
ATAACATTCCAATTGTCAAG+AGG | 0.586980 | 4.3:+10432917 | MS.gene061805:CDS |
CACCTCACCATTGGTTCCAG+CGG | 0.588414 | 4.3:-10436597 | None:intergenic |
TAAAAGCAAGTCGGTAGGAG+AGG | 0.589366 | 4.3:-10433835 | None:intergenic |
ACGTCCAATGAGATACCTGC+TGG | 0.590348 | 4.3:+10433475 | MS.gene061805:CDS |
CCTTCTTATGCTAATGAGTG+GGG | 0.592758 | 4.3:+10434473 | MS.gene061805:CDS |
ATGTAACAACAGAGCAAAGT+GGG | 0.595789 | 4.3:+10433396 | MS.gene061805:CDS |
ATAACGAACCTGAACAGAGT+TGG | 0.596640 | 4.3:-10433861 | None:intergenic |
TCTACTGCTCAGGAAGCCGC+TGG | 0.597751 | 4.3:+10436581 | MS.gene061805:CDS |
GGCTGTCGGAGGCCATTGCA+AGG | 0.600168 | 4.3:+10436196 | MS.gene061805:CDS |
AAATGATAGAACTTTGGCTG+TGG | 0.600445 | 4.3:+10437380 | MS.gene061805:CDS |
TGATACAAATCCTGGCAGTA+GGG | 0.600996 | 4.3:+10436131 | MS.gene061805:CDS |
GTTCACAAATCTACTCATGA+AGG | 0.603800 | 4.3:+10434495 | MS.gene061805:CDS |
TGAGATTGTAGAACATGCTA+GGG | 0.603809 | 4.3:+10433534 | MS.gene061805:CDS |
GTTCGACCTGAGCTTCTCCA+AGG | 0.607207 | 4.3:+10433164 | MS.gene061805:CDS |
CATCTGGGAATGAAGGTGTG+AGG | 0.608451 | 4.3:+10433786 | MS.gene061805:CDS |
ATCCAGATGACACCTTGCAA+TGG | 0.610507 | 4.3:-10436208 | None:intergenic |
ATTGTAGAACATGCTAGGGC+TGG | 0.615899 | 4.3:+10433538 | MS.gene061805:CDS |
TTCAAGTGTCTAGAATGTGG+TGG | 0.616955 | 4.3:+10433191 | MS.gene061805:CDS |
GCTGTCTAAGACGCATGACA+AGG | 0.617928 | 4.3:-10436772 | None:intergenic |
AGCTTTAATCAGGCTGTCGG+AGG | 0.618052 | 4.3:+10436185 | MS.gene061805:CDS |
ATCCTTCTTATGCTAATGAG+TGG | 0.618694 | 4.3:+10434471 | MS.gene061805:CDS |
ATTGAAGGTTGCAATTCATG+AGG | 0.621895 | 4.3:+10435551 | MS.gene061805:intron |
GTTGACTGCAACTGTTGCCA+AGG | 0.630299 | 4.3:+10434735 | MS.gene061805:CDS |
GGTAATCTGTAACATCGTCT+GGG | 0.631041 | 4.3:-10435852 | None:intergenic |
GGCAATAAAAGCAAGTCGGT+AGG | 0.631539 | 4.3:-10433840 | None:intergenic |
GAGGAGACCGTAATGCAAGA+AGG | 0.631602 | 4.3:+10436797 | MS.gene061805:CDS |
AATGATAATAACGATGCTGA+TGG | 0.632424 | 4.3:+10436545 | MS.gene061805:CDS |
AGAATAACATCCAATGACCT+AGG | 0.632771 | 4.3:-10433505 | None:intergenic |
ACTGCTAAACGAACATGACG+AGG | 0.634306 | 4.3:-10436331 | None:intergenic |
CAAGTGTCTAGAATGTGGTG+GGG | 0.638582 | 4.3:+10433193 | MS.gene061805:CDS |
GAAGAAGCAGGTAGTGACGA+TGG | 0.642853 | 4.3:+10436521 | MS.gene061805:CDS |
TCTGGGAATGAAGGTGTGAG+GGG | 0.644966 | 4.3:+10433788 | MS.gene061805:CDS |
CTGTCTAAGACGCATGACAA+GGG | 0.646104 | 4.3:-10436771 | None:intergenic |
ATGTTCAAAATCAATGAACA+TGG | 0.646880 | 4.3:-10432634 | None:intergenic |
TTATCATCAGAAATGAATGT+CGG | 0.648409 | 4.3:-10432865 | None:intergenic |
AACCTTGAAAGTATAGCCGG+TGG | 0.648631 | 4.3:-10435802 | None:intergenic |
GCTTGTATCTGTAACAGGAG+TGG | 0.649403 | 4.3:+10433124 | MS.gene061805:CDS |
AGGGAAGCTTCTCAACGCAA+GGG | 0.651545 | 4.3:+10433758 | MS.gene061805:CDS |
ACTTTCAAGTGTCTAGAATG+TGG | 0.654394 | 4.3:+10433188 | MS.gene061805:CDS |
TATCATACCGTCCTCCAGCA+GGG | 0.656611 | 4.3:-10435659 | None:intergenic |
GCACAATATGAGAAGCTATG+TGG | 0.660506 | 4.3:-10435873 | None:intergenic |
TTCTGATGATAACCCTAACA+AGG | 0.660674 | 4.3:+10432876 | MS.gene061805:CDS |
TGAAGGCATCAGCCTTAGAG+GGG | 0.664188 | 4.3:+10434512 | MS.gene061805:CDS |
CATGCGTCTTAGACAGCACG+AGG | 0.667096 | 4.3:+10436778 | MS.gene061805:CDS |
CATGTAACAACAGAGCAAAG+TGG | 0.668775 | 4.3:+10433395 | MS.gene061805:CDS |
AGTGGTAACAAGGACAAGTG+AGG | 0.673592 | 4.3:+10433142 | MS.gene061805:CDS |
AGTTGGCAATAAAAGCAAGT+CGG | 0.673960 | 4.3:-10433844 | None:intergenic |
ACATTCTGATCTCTCTCCAG+GGG | 0.682522 | 4.3:-10433732 | None:intergenic |
AAATAATTACAGTTCCGTGG+AGG | 0.693918 | 4.3:+10437134 | MS.gene061805:CDS |
ACAGCAATTCAAGTATACTG+AGG | 0.742350 | 4.3:+10433232 | MS.gene061805:CDS |
ATACTTTCAAAGGATCACCA+AGG | 0.772896 | 4.3:+10436748 | MS.gene061805:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAATTAGTATATTTAT+TGG | + | chr4.3:10437224-10437243 | MS.gene061805:intron | 10.0% |
!!! | TTAAATTCTAAAATTTATTC+AGG | + | chr4.3:10436905-10436924 | MS.gene061805:intron | 10.0% |
!!! | TTGTTTTAAATTTCTATTTT+GGG | + | chr4.3:10436400-10436419 | MS.gene061805:intron | 10.0% |
!!! | TTTGTTTTAAATTTCTATTT+TGG | + | chr4.3:10436399-10436418 | MS.gene061805:intron | 10.0% |
!! | AAATATACTAATTTCTTTGA+AGG | - | chr4.3:10437222-10437241 | None:intergenic | 15.0% |
!! | AATAGATTGATAAATATTAG+GGG | - | chr4.3:10434212-10434231 | None:intergenic | 15.0% |
!! | AATTTCAATAAAAATCCAAT+TGG | - | chr4.3:10432724-10432743 | None:intergenic | 15.0% |
!! | CAATAGATTGATAAATATTA+GGG | - | chr4.3:10434213-10434232 | None:intergenic | 15.0% |
!! | GTCTTAAATTATGAATAATA+CGG | + | chr4.3:10433291-10433310 | MS.gene061805:intron | 15.0% |
!! | TTGTTTATATAAAACAATGT+CGG | + | chr4.3:10436971-10436990 | MS.gene061805:intron | 15.0% |
!! | TTTATATAAACAAATCTCAA+AGG | - | chr4.3:10436964-10436983 | None:intergenic | 15.0% |
!!! | CAAAATAATACCAAATTTTA+GGG | - | chr4.3:10432754-10432773 | None:intergenic | 15.0% |
!!! | CTAAAATTTGGTATTATTTT+GGG | + | chr4.3:10432753-10432772 | MS.gene061805:intron | 15.0% |
!!! | TTATTCATAATTTAAGACTA+CGG | - | chr4.3:10433289-10433308 | None:intergenic | 15.0% |
!!! | TTTTATGCTATACTTTATAT+CGG | - | chr4.3:10435232-10435251 | None:intergenic | 15.0% |
!! | AATGTAAACTTTATGGAATT+TGG | + | chr4.3:10433617-10433636 | MS.gene061805:intron | 20.0% |
!! | ATAGATTGATAAATATTAGG+GGG | - | chr4.3:10434211-10434230 | None:intergenic | 20.0% |
!! | ATTTGATAAAGCACAATAAT+AGG | + | chr4.3:10435018-10435037 | MS.gene061805:intron | 20.0% |
!! | GATAAAATTTACTTATTCAC+TGG | + | chr4.3:10436654-10436673 | MS.gene061805:intron | 20.0% |
!! | GCAATAGATTGATAAATATT+AGG | - | chr4.3:10434214-10434233 | None:intergenic | 20.0% |
!!! | AATTATTTTTCTCATTTTGC+TGG | - | chr4.3:10437122-10437141 | None:intergenic | 20.0% |
!!! | CCAAAATAATACCAAATTTT+AGG | - | chr4.3:10432755-10432774 | None:intergenic | 20.0% |
!!! | CCTAAAATTTGGTATTATTT+TGG | + | chr4.3:10432752-10432771 | MS.gene061805:intron | 20.0% |
!!! | CTCTATAATTGCTTTAATTT+GGG | - | chr4.3:10437178-10437197 | None:intergenic | 20.0% |
!!! | GTATTTTAATTTGCAAATTG+AGG | + | chr4.3:10432992-10433011 | MS.gene061805:intron | 20.0% |
!!! | TACAGTAGATTTTTTTCTTT+GGG | - | chr4.3:10436720-10436739 | None:intergenic | 20.0% |
!!! | TATTCATAATTTAAGACTAC+GGG | - | chr4.3:10433288-10433307 | None:intergenic | 20.0% |
!!! | TGATAAATATGTTTTCTGTA+TGG | + | chr4.3:10433930-10433949 | MS.gene061805:intron | 20.0% |
!!! | TTACAGTAGATTTTTTTCTT+TGG | - | chr4.3:10436721-10436740 | None:intergenic | 20.0% |
! | AAAGAAAAATGAACAGGTTA+AGG | - | chr4.3:10434240-10434259 | None:intergenic | 25.0% |
! | AAAGATGAATTCAAAACAAG+TGG | + | chr4.3:10435296-10435315 | MS.gene061805:intron | 25.0% |
! | AAGATGAATTCAAAACAAGT+GGG | + | chr4.3:10435297-10435316 | MS.gene061805:intron | 25.0% |
! | AATGTGAACTCAAAATCAAA+CGG | - | chr4.3:10434078-10434097 | None:intergenic | 25.0% |
! | AATTGTCATACCTGATATAT+TGG | + | chr4.3:10433700-10433719 | MS.gene061805:CDS | 25.0% |
! | AATTTAAATTTGCCAAACCA+AGG | - | chr4.3:10434935-10434954 | None:intergenic | 25.0% |
! | ATGTTCAAAATCAATGAACA+TGG | - | chr4.3:10432637-10432656 | None:intergenic | 25.0% |
! | ATTACTGAAACCCTAAAATT+TGG | + | chr4.3:10432741-10432760 | MS.gene061805:intron | 25.0% |
! | ATTGTACTGAAACAAAGAAA+GGG | - | chr4.3:10435773-10435792 | None:intergenic | 25.0% |
! | CAATAAGGTAATTAATAACC+AGG | - | chr4.3:10435722-10435741 | None:intergenic | 25.0% |
! | CCAAATTAAAGCAATTATAG+AGG | + | chr4.3:10437176-10437195 | MS.gene061805:CDS | 25.0% |
! | CCTCTATAATTGCTTTAATT+TGG | - | chr4.3:10437179-10437198 | None:intergenic | 25.0% |
! | GTAATCAAAGAAAAAGAGAA+AGG | - | chr4.3:10434600-10434619 | None:intergenic | 25.0% |
! | GTACTGAAATGTAAACTTTA+TGG | + | chr4.3:10433610-10433629 | MS.gene061805:intron | 25.0% |
! | GTTAAGAATTAAGTTAGAGT+AGG | + | chr4.3:10435114-10435133 | MS.gene061805:intron | 25.0% |
! | TAACGAAATGAAAACGAAAT+TGG | - | chr4.3:10432959-10432978 | None:intergenic | 25.0% |
! | TAACTGATGAATACTTTCAA+AGG | + | chr4.3:10436738-10436757 | MS.gene061805:CDS | 25.0% |
! | TAAGTAAGAAAGAAGCAAAA+AGG | - | chr4.3:10436040-10436059 | None:intergenic | 25.0% |
! | TGTGTTAAAGAAAAATGAAC+AGG | - | chr4.3:10434246-10434265 | None:intergenic | 25.0% |
! | TTACCTTATTGAGTTTAACT+TGG | + | chr4.3:10435731-10435750 | MS.gene061805:intron | 25.0% |
! | TTATCATCAGAAATGAATGT+CGG | - | chr4.3:10432868-10432887 | None:intergenic | 25.0% |
! | TTGAAAAGTTAAAGCAGATT+CGG | - | chr4.3:10433587-10433606 | None:intergenic | 25.0% |
! | TTTATCAAACATGAATTGAG+AGG | + | chr4.3:10435256-10435275 | MS.gene061805:intron | 25.0% |
!! | ATTGAAAGTTGAATTTTCTG+TGG | + | chr4.3:10437029-10437048 | MS.gene061805:intron | 25.0% |
!! | CGATTTTCTGATTTTATAAC+AGG | + | chr4.3:10436303-10436322 | MS.gene061805:intron | 25.0% |
!! | TTGAAAGTTGAATTTTCTGT+GGG | + | chr4.3:10437030-10437049 | MS.gene061805:intron | 25.0% |
!!! | ACAGTAGATTTTTTTCTTTG+GGG | - | chr4.3:10436719-10436738 | None:intergenic | 25.0% |
!!! | ATTTTTTTACTGGCATTTGA+GGG | + | chr4.3:10435495-10435514 | MS.gene061805:intron | 25.0% |
!!! | GAAAGTATCTCATATTTGAT+TGG | + | chr4.3:10435528-10435547 | MS.gene061805:intron | 25.0% |
!!! | GGCTTTAATCTACATATTTT+AGG | + | chr4.3:10434163-10434182 | MS.gene061805:intron | 25.0% |
!!! | TAGATTTTAATTCGAAGAGA+GGG | + | chr4.3:10437279-10437298 | MS.gene061805:intron | 25.0% |
!!! | TGAGGTATTTTTTTTCCAAT+TGG | + | chr4.3:10432706-10432725 | MS.gene061805:intron | 25.0% |
!!! | TTATGTAAGAACTTGTTTTC+AGG | + | chr4.3:10435385-10435404 | MS.gene061805:intron | 25.0% |
!!! | TTGAACACTGCTTTTTATTT+TGG | + | chr4.3:10435993-10436012 | MS.gene061805:intron | 25.0% |
!!! | TTGGTTTGGCAAATTTAAAT+TGG | + | chr4.3:10434934-10434953 | MS.gene061805:intron | 25.0% |
AAAATCAATGAACATGGTGT+TGG | - | chr4.3:10432631-10432650 | None:intergenic | 30.0% | |
AAATATTAGGGGGAAATAAC+AGG | - | chr4.3:10434201-10434220 | None:intergenic | 30.0% | |
AAGAGAGCAAATTTACTGAT+TGG | + | chr4.3:10433431-10433450 | MS.gene061805:CDS | 30.0% | |
AATATTAGGGGGAAATAACA+GGG | - | chr4.3:10434200-10434219 | None:intergenic | 30.0% | |
AATGATAATAACGATGCTGA+TGG | + | chr4.3:10436545-10436564 | MS.gene061805:CDS | 30.0% | |
ACTATTAGTATCACAAAAGC+AGG | + | chr4.3:10435588-10435607 | MS.gene061805:CDS | 30.0% | |
ATAACATTCCAATTGTCAAG+AGG | + | chr4.3:10432917-10432936 | MS.gene061805:CDS | 30.0% | |
CAACTTTCAATATGATCACA+TGG | - | chr4.3:10437020-10437039 | None:intergenic | 30.0% | |
CATTGATGAATTTGACAAGA+TGG | + | chr4.3:10435445-10435464 | MS.gene061805:CDS | 30.0% | |
CATTGTACTGAAACAAAGAA+AGG | - | chr4.3:10435774-10435793 | None:intergenic | 30.0% | |
CTATCTCTGATGAATATTTG+AGG | + | chr4.3:10432688-10432707 | MS.gene061805:CDS | 30.0% | |
CTCATATTTGATTGGATTGA+AGG | + | chr4.3:10435536-10435555 | MS.gene061805:intron | 30.0% | |
GAAAAATAATTACAGTTCCG+TGG | + | chr4.3:10437131-10437150 | MS.gene061805:CDS | 30.0% | |
GAAAGGGCAAAAACTAAATT+AGG | - | chr4.3:10435757-10435776 | None:intergenic | 30.0% | |
GACAATTGGAATGTTATAGA+AGG | - | chr4.3:10432914-10432933 | None:intergenic | 30.0% | |
GACATAAACGTTTGTATTGT+TGG | + | chr4.3:10434534-10434553 | MS.gene061805:CDS | 30.0% | |
GCAAACTTCTATAATAAGGT+AGG | + | chr4.3:10436363-10436382 | MS.gene061805:intron | 30.0% | |
GTTAAAACCTTCTTGCATTA+CGG | - | chr4.3:10436807-10436826 | None:intergenic | 30.0% | |
TCAAGCACTTTATCATTATC+TGG | + | chr4.3:10435331-10435350 | MS.gene061805:intron | 30.0% | |
TCATGTATGGTTATCATTTC+AGG | + | chr4.3:10434650-10434669 | MS.gene061805:intron | 30.0% | |
TGAAAAGTTAAAGCAGATTC+GGG | - | chr4.3:10433586-10433605 | None:intergenic | 30.0% | |
TGAATATACCTCTTGACAAT+TGG | - | chr4.3:10432928-10432947 | None:intergenic | 30.0% | |
TGAGTTTCAAGATCAAGATA+TGG | + | chr4.3:10436496-10436515 | MS.gene061805:CDS | 30.0% | |
TGCAAAAACTCTTAAACCAA+AGG | + | chr4.3:10435969-10435988 | MS.gene061805:CDS | 30.0% | |
TGCTAGAAATGATAGAACTT+TGG | + | chr4.3:10437374-10437393 | MS.gene061805:CDS | 30.0% | |
TGCTGCAAACTTCTATAATA+AGG | + | chr4.3:10436359-10436378 | MS.gene061805:CDS | 30.0% | |
TTCATTTGTGTTTGTATCCT+TGG | + | chr4.3:10434915-10434934 | MS.gene061805:intron | 30.0% | |
TTCTTTGATTACTTTCATGC+TGG | + | chr4.3:10434608-10434627 | MS.gene061805:intron | 30.0% | |
! | AATAGGATTAGAGTTGCTTT+AGG | + | chr4.3:10435035-10435054 | MS.gene061805:intron | 30.0% |
! | AATCAGTAAATTTGCTCTCT+TGG | - | chr4.3:10433432-10433451 | None:intergenic | 30.0% |
! | AGTTGAATCTGGTTTAAACT+AGG | - | chr4.3:10434976-10434995 | None:intergenic | 30.0% |
! | ATTACAACTCGCAAACATTT+TGG | - | chr4.3:10435189-10435208 | None:intergenic | 30.0% |
! | ATTTGACTGGTTGATTTAAC+AGG | + | chr4.3:10434338-10434357 | MS.gene061805:intron | 30.0% |
! | CAAATTTACTGATTGGCAAA+GGG | + | chr4.3:10433438-10433457 | MS.gene061805:CDS | 30.0% |
! | CAGGTGTTTAATGATTTTAG+AGG | + | chr4.3:10436234-10436253 | MS.gene061805:intron | 30.0% |
! | TAATTTGCAAATTGAGGCTT+TGG | + | chr4.3:10432998-10433017 | MS.gene061805:intron | 30.0% |
! | TCTTGATGACCAAAAATAGT+TGG | - | chr4.3:10434438-10434457 | None:intergenic | 30.0% |
! | TGGTTTAAGAGTTTTTGCAT+AGG | - | chr4.3:10435968-10435987 | None:intergenic | 30.0% |
! | TTAGGTTTAAAATTACTGCC+TGG | + | chr4.3:10435053-10435072 | MS.gene061805:intron | 30.0% |
! | TTCTTTGTTTCAGTACAATG+TGG | + | chr4.3:10435774-10435793 | MS.gene061805:intron | 30.0% |
! | TTGTATATGTTTTCCTTAGC+TGG | + | chr4.3:10436272-10436291 | MS.gene061805:intron | 30.0% |
! | TTTTTATAGGCTAAGGGAAT+TGG | + | chr4.3:10433082-10433101 | MS.gene061805:intron | 30.0% |
!! | ACTTTATATCGGTTTCTGAA+TGG | - | chr4.3:10435221-10435240 | None:intergenic | 30.0% |
!! | TCGATGTTTTTATAGGCTAA+GGG | + | chr4.3:10433076-10433095 | MS.gene061805:intron | 30.0% |
!! | TCTGTGTTCGATGTTTTTAT+AGG | + | chr4.3:10433069-10433088 | MS.gene061805:intron | 30.0% |
!! | TGTTTAATGATTTTAGAGGC+TGG | + | chr4.3:10436238-10436257 | MS.gene061805:intron | 30.0% |
!! | TTCGATGTTTTTATAGGCTA+AGG | + | chr4.3:10433075-10433094 | MS.gene061805:intron | 30.0% |
!! | TTTGTGTTGTTGTTGATGAT+AGG | + | chr4.3:10432791-10432810 | MS.gene061805:intron | 30.0% |
!!! | AGATTTTAATTCGAAGAGAG+GGG | + | chr4.3:10437280-10437299 | MS.gene061805:intron | 30.0% |
!!! | CAGTAGATTTTTTTCTTTGG+GGG | - | chr4.3:10436718-10436737 | None:intergenic | 30.0% |
!!! | CATTTTTTTACTGGCATTTG+AGG | + | chr4.3:10435494-10435513 | MS.gene061805:intron | 30.0% |
!!! | GTAGATTTTAATTCGAAGAG+AGG | + | chr4.3:10437278-10437297 | MS.gene061805:intron | 30.0% |
!!! | TCATTGATTCACTATTTTCC+AGG | - | chr4.3:10435074-10435093 | None:intergenic | 30.0% |
AAAAGCAGTGTTCAAACCTT+TGG | - | chr4.3:10435988-10436007 | None:intergenic | 35.0% | |
AAATAATTACAGTTCCGTGG+AGG | + | chr4.3:10437134-10437153 | MS.gene061805:CDS | 35.0% | |
AAATGATAGAACTTTGGCTG+TGG | + | chr4.3:10437380-10437399 | MS.gene061805:CDS | 35.0% | |
AATAACATGTTCTGCTAACC+TGG | + | chr4.3:10435701-10435720 | MS.gene061805:intron | 35.0% | |
AATGCTTAGTTCAGAATCCA+TGG | - | chr4.3:10435166-10435185 | None:intergenic | 35.0% | |
AATTCATCTTTACCGAACTC+AGG | - | chr4.3:10435287-10435306 | None:intergenic | 35.0% | |
ACAGCAATTCAAGTATACTG+AGG | + | chr4.3:10433232-10433251 | MS.gene061805:CDS | 35.0% | |
ACAGTAGAACTAGTTGAATC+TGG | - | chr4.3:10434987-10435006 | None:intergenic | 35.0% | |
AGAATAACATCCAATGACCT+AGG | - | chr4.3:10433508-10433527 | None:intergenic | 35.0% | |
AGACATCAGGAATAGAAAGA+AGG | + | chr4.3:10433986-10434005 | MS.gene061805:CDS | 35.0% | |
AGACGATTGCAAGGTAAAAT+GGG | - | chr4.3:10436630-10436649 | None:intergenic | 35.0% | |
AGCAACGGGATTTGATTAAA+TGG | + | chr4.3:10437088-10437107 | MS.gene061805:CDS | 35.0% | |
AGGCCAAGTTAAACTCAATA+AGG | - | chr4.3:10435737-10435756 | None:intergenic | 35.0% | |
AGTTGGCAATAAAAGCAAGT+CGG | - | chr4.3:10433847-10433866 | None:intergenic | 35.0% | |
ATACAAAACTCTCCAGTTTC+TGG | - | chr4.3:10434763-10434782 | None:intergenic | 35.0% | |
ATACTTTCAAAGGATCACCA+AGG | + | chr4.3:10436748-10436767 | MS.gene061805:CDS | 35.0% | |
ATCCTTCTTATGCTAATGAG+TGG | + | chr4.3:10434471-10434490 | MS.gene061805:CDS | 35.0% | |
ATCTGCAATTCACTGTAAGT+TGG | + | chr4.3:10434024-10434043 | MS.gene061805:intron | 35.0% | |
ATGAGATTGTAGAACATGCT+AGG | + | chr4.3:10433533-10433552 | MS.gene061805:CDS | 35.0% | |
ATGTAACAACAGAGCAAAGT+GGG | + | chr4.3:10433396-10433415 | MS.gene061805:CDS | 35.0% | |
ATTGAAGGTTGCAATTCATG+AGG | + | chr4.3:10435551-10435570 | MS.gene061805:intron | 35.0% | |
CAACCAGTCAAATATAGTGT+TGG | - | chr4.3:10434331-10434350 | None:intergenic | 35.0% | |
CAACGTTGATATCCTTGTTA+GGG | - | chr4.3:10432891-10432910 | None:intergenic | 35.0% | |
CAATATGATCACATGGAGTT+TGG | - | chr4.3:10437013-10437032 | None:intergenic | 35.0% | |
CATTTGATCGTGATAGATGA+TGG | + | chr4.3:10437303-10437322 | MS.gene061805:CDS | 35.0% | |
CGAATTGAATGGATCATGTA+TGG | + | chr4.3:10434637-10434656 | MS.gene061805:intron | 35.0% | |
CTGTTGTTACATGTAGCATT+TGG | - | chr4.3:10433388-10433407 | None:intergenic | 35.0% | |
CTTCCACTAATACAAAAGAG+CGG | - | chr4.3:10434802-10434821 | None:intergenic | 35.0% | |
GAAAAGTTAAAGCAGATTCG+GGG | - | chr4.3:10433585-10433604 | None:intergenic | 35.0% | |
GAACATGTTATTACCTTCAG+TGG | - | chr4.3:10435693-10435712 | None:intergenic | 35.0% | |
GTAAAAATCACCCTGCAAAT+TGG | - | chr4.3:10433671-10433690 | None:intergenic | 35.0% | |
GTAGAAGAGAAATAGACATC+AGG | + | chr4.3:10433973-10433992 | MS.gene061805:CDS | 35.0% | |
GTAGCATTTGGACAAATTGT+TGG | - | chr4.3:10433376-10433395 | None:intergenic | 35.0% | |
GTTCACAAATCTACTCATGA+AGG | + | chr4.3:10434495-10434514 | MS.gene061805:CDS | 35.0% | |
TAGACGATTGCAAGGTAAAA+TGG | - | chr4.3:10436631-10436650 | None:intergenic | 35.0% | |
TCCTTCTTATGCTAATGAGT+GGG | + | chr4.3:10434472-10434491 | MS.gene061805:CDS | 35.0% | |
TGACCAACACTATATTTGAC+TGG | + | chr4.3:10434325-10434344 | MS.gene061805:intron | 35.0% | |
TGAGATTGTAGAACATGCTA+GGG | + | chr4.3:10433534-10433553 | MS.gene061805:CDS | 35.0% | |
TGATAAGTCTAAACCACTGA+AGG | + | chr4.3:10435677-10435696 | MS.gene061805:CDS | 35.0% | |
TGGATGAAGTTCAAAGAATG+AGG | + | chr4.3:10434370-10434389 | MS.gene061805:CDS | 35.0% | |
TTCTGATGATAACCCTAACA+AGG | + | chr4.3:10432876-10432895 | MS.gene061805:CDS | 35.0% | |
TTGTGTTTGTATCCTTGGTT+TGG | + | chr4.3:10434920-10434939 | MS.gene061805:intron | 35.0% | |
TTTACCTTGCAATCGTCTAT+GGG | + | chr4.3:10436632-10436651 | MS.gene061805:intron | 35.0% | |
! | ACTTTCAAGTGTCTAGAATG+TGG | + | chr4.3:10433188-10433207 | MS.gene061805:CDS | 35.0% |
! | AGTGTAGCTCCAACTATTTT+TGG | + | chr4.3:10434426-10434445 | MS.gene061805:CDS | 35.0% |
! | ATTTGCAGGGTGATTTTTAC+TGG | + | chr4.3:10433671-10433690 | MS.gene061805:intron | 35.0% |
! | GCAAATTTACTGATTGGCAA+AGG | + | chr4.3:10433437-10433456 | MS.gene061805:CDS | 35.0% |
! | TCAAACCTTGAAAGTATAGC+CGG | - | chr4.3:10435808-10435827 | None:intergenic | 35.0% |
! | TTTTACCTTGCAATCGTCTA+TGG | + | chr4.3:10436631-10436650 | MS.gene061805:intron | 35.0% |
! | TTTTATTGCCAACTCTGTTC+AGG | + | chr4.3:10433853-10433872 | MS.gene061805:CDS | 35.0% |
!! | AACTGGAGAGTTTTGTATTG+AGG | + | chr4.3:10434765-10434784 | MS.gene061805:CDS | 35.0% |
!! | TTATTCAGGTTCTGAACATC+TGG | + | chr4.3:10436919-10436938 | MS.gene061805:intron | 35.0% |
!!! | AGAGGCATGCATTTTTTTAC+TGG | + | chr4.3:10435485-10435504 | MS.gene061805:intron | 35.0% |
!!! | TACTTTTTTTCCTTGCAGAG+TGG | + | chr4.3:10436451-10436470 | MS.gene061805:intron | 35.0% |
AAACGTTTATGTCCCCTCTA+AGG | - | chr4.3:10434527-10434546 | None:intergenic | 40.0% | |
AATCGTCTTTAGACCAGCTA+AGG | - | chr4.3:10436288-10436307 | None:intergenic | 40.0% | |
AATTGAGACTTTGCACAGCT+AGG | - | chr4.3:10434564-10434583 | None:intergenic | 40.0% | |
AGAGAGATCAGAATGTCGTA+GGG | + | chr4.3:10433739-10433758 | MS.gene061805:CDS | 40.0% | |
AGCTACACTTTCAACAAGCT+TGG | - | chr4.3:10434415-10434434 | None:intergenic | 40.0% | |
ATAACGAACCTGAACAGAGT+TGG | - | chr4.3:10433864-10433883 | None:intergenic | 40.0% | |
ATAAGTTTGTCTGTCCACCA+TGG | + | chr4.3:10435146-10435165 | MS.gene061805:intron | 40.0% | |
CAAGATGGACATAAGAGATC+AGG | + | chr4.3:10435460-10435479 | MS.gene061805:CDS | 40.0% | |
CACAAACTGTCCAATTTGCA+GGG | + | chr4.3:10433658-10433677 | MS.gene061805:intron | 40.0% | |
CAGGATTTGTATCAGCTCTA+CGG | - | chr4.3:10436125-10436144 | None:intergenic | 40.0% | |
CATACCTGATATATTGGCGT+TGG | + | chr4.3:10433706-10433725 | MS.gene061805:CDS | 40.0% | |
CATGTAACAACAGAGCAAAG+TGG | + | chr4.3:10433395-10433414 | MS.gene061805:CDS | 40.0% | |
CCAAGATCTGTGTATACATC+TGG | + | chr4.3:10434691-10434710 | MS.gene061805:CDS | 40.0% | |
CCAGATGTATACACAGATCT+TGG | - | chr4.3:10434694-10434713 | None:intergenic | 40.0% | |
CCTTCTTATGCTAATGAGTG+GGG | + | chr4.3:10434473-10434492 | MS.gene061805:CDS | 40.0% | |
CTAGACACTTGAAAGTTCCT+TGG | - | chr4.3:10433184-10433203 | None:intergenic | 40.0% | |
CTCTTCTACCATCACAAATC+TGG | - | chr4.3:10433962-10433981 | None:intergenic | 40.0% | |
GAATTGGCTACATCAGAGAT+TGG | + | chr4.3:10433098-10433117 | MS.gene061805:CDS | 40.0% | |
GACATAAGAGATCAGGTAAG+AGG | + | chr4.3:10435467-10435486 | MS.gene061805:intron | 40.0% | |
GATTGCAAGGTAAAATGGGT+AGG | - | chr4.3:10436626-10436645 | None:intergenic | 40.0% | |
GCAACGTTGATATCCTTGTT+AGG | - | chr4.3:10432892-10432911 | None:intergenic | 40.0% | |
GCACAATATGAGAAGCTATG+TGG | - | chr4.3:10435876-10435895 | None:intergenic | 40.0% | |
GCACACATACATGATGTTCT+CGG | + | chr4.3:10434274-10434293 | MS.gene061805:intron | 40.0% | |
GGTAATCTGTAACATCGTCT+GGG | - | chr4.3:10435855-10435874 | None:intergenic | 40.0% | |
GTCAGATGCAAGAAAACTAC+TGG | + | chr4.3:10436080-10436099 | MS.gene061805:CDS | 40.0% | |
TATATGCAACACCAGTCAGT+TGG | - | chr4.3:10434115-10434134 | None:intergenic | 40.0% | |
TGACGTTAGCTGCATTAATC+AGG | - | chr4.3:10436064-10436083 | None:intergenic | 40.0% | |
TGATACAAATCCTGGCAGTA+GGG | + | chr4.3:10436131-10436150 | MS.gene061805:CDS | 40.0% | |
TGGTAATCTGTAACATCGTC+TGG | - | chr4.3:10435856-10435875 | None:intergenic | 40.0% | |
TTATCCCATAGACGATTGCA+AGG | - | chr4.3:10436639-10436658 | None:intergenic | 40.0% | |
TTGCATATCGGATGACAGTT+AGG | + | chr4.3:10436154-10436173 | MS.gene061805:CDS | 40.0% | |
! | AAGGTGTCATCTGGATAATC+AGG | + | chr4.3:10436215-10436234 | MS.gene061805:CDS | 40.0% |
! | ACAAGCTTGGTGAAGAAATC+TGG | - | chr4.3:10434402-10434421 | None:intergenic | 40.0% |
! | GGTTTGTTCCAGATTTGTGA+TGG | + | chr4.3:10433951-10433970 | MS.gene061805:intron | 40.0% |
! | GGTTTTTCTATTGCAGGAAG+TGG | + | chr4.3:10437051-10437070 | MS.gene061805:intron | 40.0% |
! | TCAAGTGTCTAGAATGTGGT+GGG | + | chr4.3:10433192-10433211 | MS.gene061805:CDS | 40.0% |
! | TCTGTGGGTTTTTCTATTGC+AGG | + | chr4.3:10437045-10437064 | MS.gene061805:intron | 40.0% |
! | TTCAAGTGTCTAGAATGTGG+TGG | + | chr4.3:10433191-10433210 | MS.gene061805:CDS | 40.0% |
!! | GTAAGAACTTGTTTTCAGGC+CGG | + | chr4.3:10435389-10435408 | MS.gene061805:intron | 40.0% |
!!! | CTATTTTGGGAGCTAGCTTT+TGG | + | chr4.3:10436413-10436432 | MS.gene061805:intron | 40.0% |
!!! | GAGGCTTTGGAGTTTTGATT+AGG | + | chr4.3:10433011-10433030 | MS.gene061805:intron | 40.0% |
!!! | GGAGTTTTGATTAGGTCTGT+CGG | + | chr4.3:10433019-10433038 | MS.gene061805:intron | 40.0% |
AAAGTTCCTTGGAGAAGCTC+AGG | - | chr4.3:10433173-10433192 | None:intergenic | 45.0% | |
ACATTCTGATCTCTCTCCAG+GGG | - | chr4.3:10433735-10433754 | None:intergenic | 45.0% | |
ACTGCTAAACGAACATGACG+AGG | - | chr4.3:10436334-10436353 | None:intergenic | 45.0% | |
AGTGGTAACAAGGACAAGTG+AGG | + | chr4.3:10433142-10433161 | MS.gene061805:CDS | 45.0% | |
AGTTCTGCTGTAGTGAACGT+TGG | - | chr4.3:10435931-10435950 | None:intergenic | 45.0% | |
ATCCAGATGACACCTTGCAA+TGG | - | chr4.3:10436211-10436230 | None:intergenic | 45.0% | |
ATTGTAGAACATGCTAGGGC+TGG | + | chr4.3:10433538-10433557 | MS.gene061805:CDS | 45.0% | |
CAAGATATGGACGAAGAAGC+AGG | + | chr4.3:10436509-10436528 | MS.gene061805:CDS | 45.0% | |
CAGCTCTATAGAACTAGCGT+AGG | + | chr4.3:10434847-10434866 | MS.gene061805:intron | 45.0% | |
CCACAAACTGTCCAATTTGC+AGG | + | chr4.3:10433657-10433676 | MS.gene061805:intron | 45.0% | |
CCCCACTCATTAGCATAAGA+AGG | - | chr4.3:10434476-10434495 | None:intergenic | 45.0% | |
CCTGCAAATTGGACAGTTTG+TGG | - | chr4.3:10433660-10433679 | None:intergenic | 45.0% | |
CGTAGAGCTGATACAAATCC+TGG | + | chr4.3:10436123-10436142 | MS.gene061805:CDS | 45.0% | |
CTCCATAACAAACCTCTTGC+AGG | - | chr4.3:10432839-10432858 | None:intergenic | 45.0% | |
CTGATACAAATCCTGGCAGT+AGG | + | chr4.3:10436130-10436149 | MS.gene061805:CDS | 45.0% | |
CTGTAACAGGAGTGGTAACA+AGG | + | chr4.3:10433132-10433151 | MS.gene061805:CDS | 45.0% | |
GAAAGTCATCATCTGCTGCT+GGG | + | chr4.3:10434713-10434732 | MS.gene061805:CDS | 45.0% | |
GAAGCCAACGCCAATATATC+AGG | - | chr4.3:10433713-10433732 | None:intergenic | 45.0% | |
GACATTCTGATCTCTCTCCA+GGG | - | chr4.3:10433736-10433755 | None:intergenic | 45.0% | |
GAGAGAGATCAGAATGTCGT+AGG | + | chr4.3:10433738-10433757 | MS.gene061805:CDS | 45.0% | |
GATTTAACAGGCTCAGGAAC+TGG | + | chr4.3:10434350-10434369 | MS.gene061805:intron | 45.0% | |
GCTTAGTTCAGAATCCATGG+TGG | - | chr4.3:10435163-10435182 | None:intergenic | 45.0% | |
GCTTGTATCTGTAACAGGAG+TGG | + | chr4.3:10433124-10433143 | MS.gene061805:CDS | 45.0% | |
GGCAATAAAAGCAAGTCGGT+AGG | - | chr4.3:10433843-10433862 | None:intergenic | 45.0% | |
GGTAGGCTTGTATCTGTAAC+AGG | + | chr4.3:10433119-10433138 | MS.gene061805:CDS | 45.0% | |
GGTTGCAATTCATGAGGCTA+TGG | + | chr4.3:10435557-10435576 | MS.gene061805:intron | 45.0% | |
TAAAAGCAAGTCGGTAGGAG+AGG | - | chr4.3:10433838-10433857 | None:intergenic | 45.0% | |
TAATTACAGTTCCGTGGAGG+AGG | + | chr4.3:10437137-10437156 | MS.gene061805:CDS | 45.0% | |
TGGCTACATCAGAGATTGGT+AGG | + | chr4.3:10433102-10433121 | MS.gene061805:CDS | 45.0% | |
TTACTGGCATTTGAGGGTCA+TGG | + | chr4.3:10435501-10435520 | MS.gene061805:intron | 45.0% | |
TTAGGGGGAAATAACAGGGA+TGG | - | chr4.3:10434196-10434215 | None:intergenic | 45.0% | |
TTGCAGGCATTCTGCAAGTA+AGG | - | chr4.3:10432823-10432842 | None:intergenic | 45.0% | |
! | AACCTTGAAAGTATAGCCGG+TGG | - | chr4.3:10435805-10435824 | None:intergenic | 45.0% |
! | ATCTGGGAATGAAGGTGTGA+GGG | + | chr4.3:10433787-10433806 | MS.gene061805:CDS | 45.0% |
! | CAAGTGTCTAGAATGTGGTG+GGG | + | chr4.3:10433193-10433212 | MS.gene061805:CDS | 45.0% |
! | CTGCCGCTCTTTTGTATTAG+TGG | + | chr4.3:10434796-10434815 | MS.gene061805:intron | 45.0% |
! | CTGGTTGATTTAACAGGCTC+AGG | + | chr4.3:10434344-10434363 | MS.gene061805:intron | 45.0% |
! | CTGTCTAAGACGCATGACAA+GGG | - | chr4.3:10436774-10436793 | None:intergenic | 45.0% |
! | GCTTTGATGCTTGCTGACAA+TGG | + | chr4.3:10435413-10435432 | MS.gene061805:CDS | 45.0% |
! | GGAAGCTTTAATCAGGCTGT+CGG | + | chr4.3:10436182-10436201 | MS.gene061805:CDS | 45.0% |
! | GGCAGTTGGAAGCTTTAATC+AGG | + | chr4.3:10436175-10436194 | MS.gene061805:CDS | 45.0% |
! | TCAAAGGTGCGCTAGACAAA+GGG | - | chr4.3:10436948-10436967 | None:intergenic | 45.0% |
! | TCTTTGGGGGTTAGATCCAT+CGG | - | chr4.3:10436705-10436724 | None:intergenic | 45.0% |
! | TGATCGTGATAGATGATGGC+AGG | + | chr4.3:10437307-10437326 | MS.gene061805:CDS | 45.0% |
! | TTCCACCGGCTATACTTTCA+AGG | + | chr4.3:10435800-10435819 | MS.gene061805:CDS | 45.0% |
!! | ATGAAGGCATCAGCCTTAGA+GGG | + | chr4.3:10434511-10434530 | MS.gene061805:CDS | 45.0% |
!! | GCTGGTTTGTGCGAATTGAA+TGG | + | chr4.3:10434626-10434645 | MS.gene061805:intron | 45.0% |
!! | TGAGAGGTATTGCCTGAGTT+CGG | + | chr4.3:10435272-10435291 | MS.gene061805:intron | 45.0% |
!! | TGCCTGCAAGAGGTTTGTTA+TGG | + | chr4.3:10432834-10432853 | MS.gene061805:CDS | 45.0% |
!!! | TATGAATAATATAAAATTTT+TGG | + | chr4.3:10434142-10434161 | MS.gene061805:intron | 5.0% |
AACGATGCTGATGGTCAAGC+TGG | + | chr4.3:10436554-10436573 | MS.gene061805:CDS | 50.0% | |
ACGTCCAATGAGATACCTGC+TGG | + | chr4.3:10433475-10433494 | MS.gene061805:CDS | 50.0% | |
ACTTGCAGAATGCCTGCAAG+AGG | + | chr4.3:10432824-10432843 | MS.gene061805:CDS | 50.0% | |
AGAGCCAGCAGGTATCTCAT+TGG | - | chr4.3:10433482-10433501 | None:intergenic | 50.0% | |
AGCTGGAAACTCTACTGCTC+AGG | + | chr4.3:10436571-10436590 | MS.gene061805:CDS | 50.0% | |
AGCTGTCATGACCAACTGAC+TGG | + | chr4.3:10434101-10434120 | MS.gene061805:intron | 50.0% | |
AGGGAAGCTTCTCAACGCAA+GGG | + | chr4.3:10433758-10433777 | MS.gene061805:CDS | 50.0% | |
ATTGCAGGAAGTGGCTTAGC+TGG | + | chr4.3:10437060-10437079 | MS.gene061805:intron | 50.0% | |
CGACATTCTGATCTCTCTCC+AGG | - | chr4.3:10433737-10433756 | None:intergenic | 50.0% | |
CTGGCAGTAGGGTTGCATAT+CGG | + | chr4.3:10436142-10436161 | MS.gene061805:CDS | 50.0% | |
CTTAGCTGGGATGAAGCAAC+GGG | + | chr4.3:10437074-10437093 | MS.gene061805:CDS | 50.0% | |
CTTGCAGAAAAACCAGCCGA+TGG | + | chr4.3:10436686-10436705 | MS.gene061805:intron | 50.0% | |
GAAGAAGCAGGTAGTGACGA+TGG | + | chr4.3:10436521-10436540 | MS.gene061805:CDS | 50.0% | |
GAGGAGACCGTAATGCAAGA+AGG | + | chr4.3:10436797-10436816 | MS.gene061805:CDS | 50.0% | |
GATTAGGTCTGTCGGTGTGA+GGG | + | chr4.3:10433027-10433046 | MS.gene061805:intron | 50.0% | |
GCTTAGCTGGGATGAAGCAA+CGG | + | chr4.3:10437073-10437092 | MS.gene061805:CDS | 50.0% | |
GGAAAGTCATCATCTGCTGC+TGG | + | chr4.3:10434712-10434731 | MS.gene061805:CDS | 50.0% | |
GGTGCTTCATCTGGGAATGA+AGG | + | chr4.3:10433779-10433798 | MS.gene061805:CDS | 50.0% | |
GTACAATGTGGCTCTTCCAC+CGG | + | chr4.3:10435786-10435805 | MS.gene061805:intron | 50.0% | |
GTTGACTGCAACTGTTGCCA+AGG | + | chr4.3:10434735-10434754 | MS.gene061805:CDS | 50.0% | |
GTTGCCAAGGAACCAGAAAC+TGG | + | chr4.3:10434748-10434767 | MS.gene061805:CDS | 50.0% | |
TAGGGAAGCTTCTCAACGCA+AGG | + | chr4.3:10433757-10433776 | MS.gene061805:CDS | 50.0% | |
TATCATACCGTCCTCCAGCA+GGG | - | chr4.3:10435662-10435681 | None:intergenic | 50.0% | |
TCACTTGACTCCACTCTGCA+AGG | - | chr4.3:10436464-10436483 | None:intergenic | 50.0% | |
TCGGATGACAGTTAGGCAGT+TGG | + | chr4.3:10436161-10436180 | MS.gene061805:CDS | 50.0% | |
TGATTAGGTCTGTCGGTGTG+AGG | + | chr4.3:10433026-10433045 | MS.gene061805:intron | 50.0% | |
TTATCATACCGTCCTCCAGC+AGG | - | chr4.3:10435663-10435682 | None:intergenic | 50.0% | |
TTCAACTTTCGCCTCCTCCA+CGG | - | chr4.3:10437151-10437170 | None:intergenic | 50.0% | |
TTGCAGGAAGTGGCTTAGCT+GGG | + | chr4.3:10437061-10437080 | MS.gene061805:intron | 50.0% | |
TTGGCAAAGGGTCAGAATGC+AGG | + | chr4.3:10433450-10433469 | MS.gene061805:CDS | 50.0% | |
! | AGCTTTAATCAGGCTGTCGG+AGG | + | chr4.3:10436185-10436204 | MS.gene061805:CDS | 50.0% |
! | CATCTGGGAATGAAGGTGTG+AGG | + | chr4.3:10433786-10433805 | MS.gene061805:CDS | 50.0% |
! | CTCAAAGGTGCGCTAGACAA+AGG | - | chr4.3:10436949-10436968 | None:intergenic | 50.0% |
! | GCTGTCTAAGACGCATGACA+AGG | - | chr4.3:10436775-10436794 | None:intergenic | 50.0% |
! | TCTGGGAATGAAGGTGTGAG+GGG | + | chr4.3:10433788-10433807 | MS.gene061805:CDS | 50.0% |
!! | AACGCAAGGGTGCTTCATCT+GGG | + | chr4.3:10433771-10433790 | MS.gene061805:CDS | 50.0% |
!! | CATGAAGGCATCAGCCTTAG+AGG | + | chr4.3:10434510-10434529 | MS.gene061805:CDS | 50.0% |
!! | CTCTCCAGTTTCTGGTTCCT+TGG | - | chr4.3:10434755-10434774 | None:intergenic | 50.0% |
!! | TGAAGGCATCAGCCTTAGAG+GGG | + | chr4.3:10434512-10434531 | MS.gene061805:CDS | 50.0% |
AAGACGCATGACAAGGGCCT+TGG | - | chr4.3:10436768-10436787 | None:intergenic | 55.0% | |
CAAGCAGCATCAGAAGCTGC+TGG | + | chr4.3:10437330-10437349 | MS.gene061805:CDS | 55.0% | |
CATGCGTCTTAGACAGCACG+AGG | + | chr4.3:10436778-10436797 | MS.gene061805:CDS | 55.0% | |
CGATATGCAACCCTACTGCC+AGG | - | chr4.3:10436144-10436163 | None:intergenic | 55.0% | |
CTCTGACTCCCAAAGCCCTA+AGG | - | chr4.3:10433814-10433833 | None:intergenic | 55.0% | |
GGCATTTGAGGGTCATGGAC+TGG | + | chr4.3:10435506-10435525 | MS.gene061805:intron | 55.0% | |
GTCAGCAAGCATCAAAGCGC+CGG | - | chr4.3:10435411-10435430 | None:intergenic | 55.0% | |
GTTCGACCTGAGCTTCTCCA+AGG | + | chr4.3:10433164-10433183 | MS.gene061805:CDS | 55.0% | |
TGGCTCTCTGCCTAGGTCAT+TGG | + | chr4.3:10433495-10433514 | MS.gene061805:CDS | 55.0% | |
! | ATGAAGGTGTGAGGGGCCTT+AGG | + | chr4.3:10433795-10433814 | MS.gene061805:CDS | 55.0% |
! | GGCCATTGCAAGGTGTCATC+TGG | + | chr4.3:10436206-10436225 | MS.gene061805:CDS | 55.0% |
! | TGAAGGTGTGAGGGGCCTTA+GGG | + | chr4.3:10433796-10433815 | MS.gene061805:CDS | 55.0% |
!! | ATATTGGCGTTGGCTTCCCC+TGG | + | chr4.3:10433716-10433735 | MS.gene061805:CDS | 55.0% |
!! | CAACGCAAGGGTGCTTCATC+TGG | + | chr4.3:10433770-10433789 | MS.gene061805:CDS | 55.0% |
ATACCGTCCTCCAGCAGGGT+TGG | - | chr4.3:10435658-10435677 | None:intergenic | 60.0% | |
GTGAGGGGCCTTAGGGCTTT+GGG | + | chr4.3:10433803-10433822 | MS.gene061805:CDS | 60.0% | |
TCTACTGCTCAGGAAGCCGC+TGG | + | chr4.3:10436581-10436600 | MS.gene061805:CDS | 60.0% | |
TGGGGGTTAGATCCATCGGC+TGG | - | chr4.3:10436701-10436720 | None:intergenic | 60.0% | |
TGTGAGGGGCCTTAGGGCTT+TGG | + | chr4.3:10433802-10433821 | MS.gene061805:CDS | 60.0% | |
! | AGGGTTGGCAGCGGCAAGAA+TGG | - | chr4.3:10435643-10435662 | None:intergenic | 60.0% |
!! | TACCTGCTGGCTCTCTGCCT+AGG | + | chr4.3:10433488-10433507 | MS.gene061805:CDS | 60.0% |
CTGCCAACCCTGCTGGAGGA+CGG | + | chr4.3:10435652-10435671 | MS.gene061805:CDS | 65.0% | |
GACCTAGGCAGAGAGCCAGC+AGG | - | chr4.3:10433493-10433512 | None:intergenic | 65.0% | |
GGCTGTCGGAGGCCATTGCA+AGG | + | chr4.3:10436196-10436215 | MS.gene061805:CDS | 65.0% | |
! | TCCTCCAGCAGGGTTGGCAG+CGG | - | chr4.3:10435652-10435671 | None:intergenic | 65.0% |
CTTGCCGCTGCCAACCCTGC+TGG | + | chr4.3:10435645-10435664 | MS.gene061805:CDS | 70.0% | |
GCCGCTGCCAACCCTGCTGG+AGG | + | chr4.3:10435648-10435667 | MS.gene061805:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 10432612 | 10437425 | 10432612 | ID=MS.gene061805 |
chr4.3 | mRNA | 10432612 | 10437425 | 10432612 | ID=MS.gene061805.t1;Parent=MS.gene061805 |
chr4.3 | exon | 10432612 | 10432709 | 10432612 | ID=MS.gene061805.t1.exon1;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10432612 | 10432709 | 10432612 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10432813 | 10432938 | 10432813 | ID=MS.gene061805.t1.exon2;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10432813 | 10432938 | 10432813 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10433091 | 10433253 | 10433091 | ID=MS.gene061805.t1.exon3;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10433091 | 10433253 | 10433091 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10433373 | 10433566 | 10433373 | ID=MS.gene061805.t1.exon4;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10433373 | 10433566 | 10433373 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10433679 | 10433874 | 10433679 | ID=MS.gene061805.t1.exon5;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10433679 | 10433874 | 10433679 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10433963 | 10434037 | 10433963 | ID=MS.gene061805.t1.exon6;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10433963 | 10434037 | 10433963 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10434360 | 10434589 | 10434360 | ID=MS.gene061805.t1.exon7;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10434360 | 10434589 | 10434360 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10434672 | 10434786 | 10434672 | ID=MS.gene061805.t1.exon8;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10434672 | 10434786 | 10434672 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10435407 | 10435481 | 10435407 | ID=MS.gene061805.t1.exon9;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10435407 | 10435481 | 10435407 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10435558 | 10435698 | 10435558 | ID=MS.gene061805.t1.exon10;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10435558 | 10435698 | 10435558 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10435787 | 10435990 | 10435787 | ID=MS.gene061805.t1.exon11;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10435787 | 10435990 | 10435787 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10436075 | 10436236 | 10436075 | ID=MS.gene061805.t1.exon12;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10436075 | 10436236 | 10436075 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10436325 | 10436380 | 10436325 | ID=MS.gene061805.t1.exon13;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10436325 | 10436380 | 10436325 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10436469 | 10436611 | 10436469 | ID=MS.gene061805.t1.exon14;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10436469 | 10436611 | 10436469 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10436693 | 10436818 | 10436693 | ID=MS.gene061805.t1.exon15;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10436693 | 10436818 | 10436693 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10437067 | 10437197 | 10437067 | ID=MS.gene061805.t1.exon16;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10437067 | 10437197 | 10437067 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
chr4.3 | exon | 10437282 | 10437425 | 10437282 | ID=MS.gene061805.t1.exon17;Parent=MS.gene061805.t1 |
chr4.3 | CDS | 10437282 | 10437425 | 10437282 | ID=cds.MS.gene061805.t1;Parent=MS.gene061805.t1 |
Gene Sequence |
Protein sequence |