Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28050.t1 | XP_013446774.1 | 96.5 | 792 | 28 | 0 | 1 | 792 | 44 | 835 | 0.00E+00 | 1417.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28050.t1 | Q6F353 | 73.1 | 799 | 196 | 5 | 1 | 792 | 44 | 830 | 0.0e+00 | 1124.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28050.t1 | A0A072TUF1 | 96.5 | 792 | 28 | 0 | 1 | 792 | 44 | 835 | 0.0e+00 | 1417.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049328 | MS.gene28050 | 0.817765 | 2.78E-52 | -1.69E-46 |
| MS.gene049397 | MS.gene28050 | 0.870399 | 1.50E-66 | -1.69E-46 |
| MS.gene049418 | MS.gene28050 | 0.823261 | 1.52E-53 | -1.69E-46 |
| MS.gene049596 | MS.gene28050 | 0.810095 | 1.37E-50 | -1.69E-46 |
| MS.gene049622 | MS.gene28050 | 0.815919 | 7.22E-52 | -1.69E-46 |
| MS.gene049660 | MS.gene28050 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene04985 | MS.gene28050 | 0.855348 | 6.70E-62 | -1.69E-46 |
| MS.gene049989 | MS.gene28050 | 0.913251 | 7.64E-84 | -1.69E-46 |
| MS.gene050297 | MS.gene28050 | 0.914789 | 1.27E-84 | -1.69E-46 |
| MS.gene050310 | MS.gene28050 | 0.842613 | 2.32E-58 | -1.69E-46 |
| MS.gene050648 | MS.gene28050 | 0.886519 | 3.19E-72 | -1.69E-46 |
| MS.gene051067 | MS.gene28050 | 0.857582 | 1.48E-62 | -1.69E-46 |
| MS.gene051094 | MS.gene28050 | 0.847516 | 1.10E-59 | -1.69E-46 |
| MS.gene051263 | MS.gene28050 | 0.860596 | 1.85E-63 | -1.69E-46 |
| MS.gene051478 | MS.gene28050 | 0.849596 | 2.92E-60 | -1.69E-46 |
| MS.gene051629 | MS.gene28050 | 0.856234 | 3.69E-62 | -1.69E-46 |
| MS.gene051648 | MS.gene28050 | 0.807491 | 4.93E-50 | -1.69E-46 |
| MS.gene051671 | MS.gene28050 | 0.823759 | 1.17E-53 | -1.69E-46 |
| MS.gene051698 | MS.gene28050 | 0.810191 | 1.30E-50 | -1.69E-46 |
| MS.gene051742 | MS.gene28050 | 0.810585 | 1.07E-50 | -1.69E-46 |
| MS.gene052041 | MS.gene28050 | 0.802831 | 4.65E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene28050 | 0.861255 | 1.17E-63 | -1.69E-46 |
| MS.gene052731 | MS.gene28050 | 0.818988 | 1.47E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene28050 | 0.810541 | 1.10E-50 | -1.69E-46 |
| MS.gene053416 | MS.gene28050 | 0.8716 | 6.04E-67 | -1.69E-46 |
| MS.gene053417 | MS.gene28050 | 0.871937 | 4.67E-67 | -1.69E-46 |
| MS.gene05369 | MS.gene28050 | 0.827246 | 1.74E-54 | -1.69E-46 |
| MS.gene053929 | MS.gene28050 | 0.822964 | 1.79E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene28050 | 0.801766 | 7.71E-49 | -1.69E-46 |
| MS.gene054643 | MS.gene28050 | 0.832448 | 9.40E-56 | -1.69E-46 |
| MS.gene055411 | MS.gene28050 | 0.817764 | 2.78E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene28050 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene055764 | MS.gene28050 | 0.825083 | 5.69E-54 | -1.69E-46 |
| MS.gene055781 | MS.gene28050 | 0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene28050 | 0.84903 | 4.20E-60 | -1.69E-46 |
| MS.gene056041 | MS.gene28050 | 0.83689 | 7.18E-57 | -1.69E-46 |
| MS.gene056042 | MS.gene28050 | 0.805005 | 1.64E-49 | -1.69E-46 |
| MS.gene056169 | MS.gene28050 | 0.811641 | 6.32E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene28050 | 0.841083 | 5.89E-58 | -1.69E-46 |
| MS.gene056335 | MS.gene28050 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene056520 | MS.gene28050 | 0.826475 | 2.66E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene28050 | 0.826958 | 2.04E-54 | -1.69E-46 |
| MS.gene057004 | MS.gene28050 | 0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene28050 | 0.846893 | 1.63E-59 | -1.69E-46 |
| MS.gene058196 | MS.gene28050 | 0.855872 | 4.71E-62 | -1.69E-46 |
| MS.gene058197 | MS.gene28050 | 0.878763 | 2.16E-69 | -1.69E-46 |
| MS.gene058198 | MS.gene28050 | 0.879867 | 8.77E-70 | -1.69E-46 |
| MS.gene058818 | MS.gene28050 | 0.84992 | 2.37E-60 | -1.69E-46 |
| MS.gene058844 | MS.gene28050 | 0.818533 | 1.86E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene28050 | 0.907448 | 5.01E-81 | -1.69E-46 |
| MS.gene060473 | MS.gene28050 | 0.860782 | 1.62E-63 | -1.69E-46 |
| MS.gene060565 | MS.gene28050 | 0.861189 | 1.22E-63 | -1.69E-46 |
| MS.gene06057 | MS.gene28050 | 0.90896 | 9.65E-82 | -1.69E-46 |
| MS.gene061260 | MS.gene28050 | 0.870865 | 1.06E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28050.t1 | MTR_8g090000 | 99.242 | 792 | 6 | 0 | 1 | 792 | 44 | 835 | 0.0 | 1628 |
| MS.gene28050.t1 | MTR_2g437540 | 76.155 | 801 | 145 | 5 | 1 | 789 | 45 | 811 | 0.0 | 1244 |
| MS.gene28050.t1 | MTR_4g071090 | 36.177 | 586 | 324 | 10 | 34 | 610 | 199 | 743 | 8.12e-116 | 370 |
| MS.gene28050.t1 | MTR_7g109480 | 37.963 | 540 | 283 | 9 | 76 | 609 | 145 | 638 | 3.78e-114 | 363 |
| MS.gene28050.t1 | MTR_4g116870 | 33.959 | 639 | 348 | 12 | 9 | 619 | 66 | 658 | 2.13e-101 | 330 |
| MS.gene28050.t1 | MTR_4g096700 | 32.421 | 694 | 356 | 15 | 37 | 670 | 67 | 707 | 3.84e-99 | 325 |
| MS.gene28050.t1 | MTR_4g122270 | 33.546 | 626 | 346 | 11 | 8 | 614 | 253 | 827 | 4.00e-97 | 323 |
| MS.gene28050.t1 | MTR_7g100680 | 31.429 | 595 | 316 | 14 | 76 | 610 | 143 | 705 | 5.27e-88 | 295 |
| MS.gene28050.t1 | MTR_2g009190 | 34.358 | 553 | 298 | 16 | 70 | 610 | 116 | 615 | 1.89e-79 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28050.t1 | AT5G44635 | 74.023 | 793 | 199 | 3 | 1 | 792 | 45 | 831 | 0.0 | 1226 |
| MS.gene28050.t1 | AT5G44635 | 71.795 | 819 | 198 | 4 | 1 | 792 | 45 | 857 | 0.0 | 1214 |
| MS.gene28050.t1 | AT4G02060 | 38.235 | 544 | 284 | 9 | 76 | 613 | 143 | 640 | 9.05e-116 | 367 |
| MS.gene28050.t1 | AT4G02060 | 38.235 | 544 | 284 | 9 | 76 | 613 | 143 | 640 | 9.05e-116 | 367 |
| MS.gene28050.t1 | AT2G16440 | 36.610 | 590 | 335 | 10 | 34 | 610 | 185 | 748 | 1.29e-115 | 370 |
| MS.gene28050.t1 | AT2G07690 | 33.912 | 634 | 353 | 10 | 9 | 619 | 62 | 652 | 1.81e-100 | 327 |
| MS.gene28050.t1 | AT5G46280 | 34.615 | 598 | 295 | 9 | 68 | 619 | 96 | 643 | 9.78e-100 | 324 |
| MS.gene28050.t1 | AT2G07690 | 36.823 | 554 | 289 | 9 | 84 | 619 | 140 | 650 | 2.98e-99 | 323 |
| MS.gene28050.t1 | AT1G44900 | 33.760 | 625 | 342 | 12 | 11 | 614 | 258 | 831 | 4.40e-99 | 328 |
| MS.gene28050.t1 | AT1G44900 | 33.760 | 625 | 342 | 12 | 11 | 614 | 256 | 829 | 4.90e-99 | 328 |
| MS.gene28050.t1 | AT5G46280 | 34.615 | 598 | 295 | 9 | 68 | 619 | 96 | 643 | 5.63e-99 | 324 |
| MS.gene28050.t1 | AT5G46280 | 34.555 | 573 | 279 | 8 | 68 | 594 | 96 | 618 | 3.09e-96 | 313 |
| MS.gene28050.t1 | AT3G09660 | 31.833 | 600 | 328 | 15 | 63 | 610 | 131 | 701 | 7.48e-91 | 302 |
| MS.gene28050.t1 | AT3G09660 | 32.161 | 597 | 327 | 15 | 63 | 610 | 131 | 698 | 1.18e-90 | 303 |
| MS.gene28050.t1 | AT3G09660 | 31.833 | 600 | 328 | 15 | 63 | 610 | 131 | 701 | 1.81e-90 | 302 |
| MS.gene28050.t1 | AT5G46280 | 35.078 | 516 | 239 | 8 | 77 | 546 | 105 | 570 | 3.73e-88 | 290 |
| MS.gene28050.t1 | AT2G14050 | 31.229 | 602 | 338 | 21 | 9 | 594 | 59 | 600 | 5.36e-73 | 251 |
| MS.gene28050.t1 | AT2G14050 | 31.229 | 602 | 338 | 21 | 9 | 594 | 59 | 600 | 7.48e-73 | 251 |
Find 176 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTATAATTGCTTTAATT+TGG | 0.072017 | 4.4:-10974685 | None:intergenic |
| ATACAAAACTCTCCAGTTTC+TGG | 0.160572 | 4.4:-10972265 | None:intergenic |
| TGTGAGGGGCCTTAGGGCTT+TGG | 0.214668 | 4.4:+10971307 | MS.gene28050:CDS |
| CTCTATAATTGCTTTAATTT+GGG | 0.252599 | 4.4:-10974684 | None:intergenic |
| CAACGCAAGGGTGCTTCATC+TGG | 0.270964 | 4.4:+10971275 | MS.gene28050:CDS |
| GTGAGGGGCCTTAGGGCTTT+GGG | 0.275142 | 4.4:+10971308 | MS.gene28050:CDS |
| AGCAACGGGATTTGATTAAA+TGG | 0.286323 | 4.4:+10974597 | MS.gene28050:CDS |
| TATTAATCAACAACATAATT+AGG | 0.298193 | 4.4:-10974914 | None:intergenic |
| GCAACATTGATATCCTTGTT+AGG | 0.308947 | 4.4:-10970394 | None:intergenic |
| CTCTCCAGTTTCTGGTTCCT+TGG | 0.319235 | 4.4:-10972257 | None:intergenic |
| TGCTGCAAACTTCTATAATA+AGG | 0.322371 | 4.4:+10973864 | MS.gene28050:CDS |
| ATGAAGGTGTGAGGGGCCTT+AGG | 0.335308 | 4.4:+10971300 | MS.gene28050:CDS |
| CATGAAGGCATCAGCCTTAG+AGG | 0.337585 | 4.4:+10972015 | MS.gene28050:CDS |
| GACATAAACGTTTGTATTGT+TGG | 0.339761 | 4.4:+10972039 | MS.gene28050:CDS |
| CTCCATAACAAACCTCTTGC+AGG | 0.345294 | 4.4:-10970341 | None:intergenic |
| GTTAAAACCTTCTTGCATTA+CGG | 0.350902 | 4.4:-10974309 | None:intergenic |
| AATTGTCATACCTGATATAT+TGG | 0.355144 | 4.4:+10971205 | MS.gene28050:CDS |
| GACAATTGGAATGTTATAGA+AGG | 0.359993 | 4.4:-10970416 | None:intergenic |
| TGGTAATCTGTAACATCGTC+TGG | 0.365977 | 4.4:-10973358 | None:intergenic |
| TGAATATACCTCTTGACAAT+TGG | 0.372562 | 4.4:-10970430 | None:intergenic |
| AATCAGTAAATTTGCTCTCT+TGG | 0.374951 | 4.4:-10970934 | None:intergenic |
| TGGCTCTCTGCCTAGGTCAT+TGG | 0.375729 | 4.4:+10971000 | MS.gene28050:CDS |
| GGTAGGCTTGTATCTGTAAC+AGG | 0.380034 | 4.4:+10970624 | MS.gene28050:CDS |
| GGCAGTTGGAAGCTTTAATC+AGG | 0.381387 | 4.4:+10973680 | MS.gene28050:CDS |
| CTTGCCGCTGCCAACCCTGC+TGG | 0.383099 | 4.4:+10973150 | MS.gene28050:CDS |
| CCAGATGTATACACAGATCT+TGG | 0.385985 | 4.4:-10972196 | None:intergenic |
| ACAAGCTTGGTGAAGAAATC+TGG | 0.391646 | 4.4:-10971904 | None:intergenic |
| ATTGCAGGAAGTGGCTTAGC+TGG | 0.400192 | 4.4:+10974569 | MS.gene28050:intron |
| AAACGTTTATGTCCCCTCTA+AGG | 0.400315 | 4.4:-10972029 | None:intergenic |
| CAAGCAGCATCAGAAGCTGC+TGG | 0.400775 | 4.4:+10974839 | MS.gene28050:CDS |
| GTTGCCAAGGAACCAGAAAC+TGG | 0.401643 | 4.4:+10972253 | MS.gene28050:CDS |
| TTCCACCGGCTATACTTTCA+AGG | 0.402725 | 4.4:+10973305 | MS.gene28050:CDS |
| GGCCATTGCAAGGTGTCATC+TGG | 0.403603 | 4.4:+10973711 | MS.gene28050:CDS |
| TGCCTGCAAGAGGTTTGTTA+TGG | 0.403641 | 4.4:+10970339 | MS.gene28050:CDS |
| CTGTTGTTACATGTAGCATT+TGG | 0.405390 | 4.4:-10970890 | None:intergenic |
| GATTTAACAGGCTCAGGAAC+TGG | 0.406162 | 4.4:+10971855 | MS.gene28050:intron |
| CCAAGATCTGTGTATACATC+TGG | 0.406994 | 4.4:+10972196 | MS.gene28050:CDS |
| CCAAATTAAAGCAATTATAG+AGG | 0.410633 | 4.4:+10974685 | MS.gene28050:CDS |
| AAGAGAGCAAATTTACTGAT+TGG | 0.413990 | 4.4:+10970936 | MS.gene28050:CDS |
| CAACATTGATATCCTTGTTA+GGG | 0.416801 | 4.4:-10970393 | None:intergenic |
| TTGCAGGCATTCTGCAAGTA+AGG | 0.418482 | 4.4:-10970325 | None:intergenic |
| GAAGCCAACGCCAATATATC+AGG | 0.418612 | 4.4:-10971215 | None:intergenic |
| CTAGACACTTGAAAGTTCCT+TGG | 0.427198 | 4.4:-10970686 | None:intergenic |
| CGACATTCTGATCTCTCTCC+AGG | 0.428347 | 4.4:-10971239 | None:intergenic |
| GGAAAGTCATCATCTGCTGC+TGG | 0.432241 | 4.4:+10972217 | MS.gene28050:CDS |
| AAGGTGTCATCTGGATAATC+AGG | 0.447002 | 4.4:+10973720 | MS.gene28050:CDS |
| AAGACGCATGACAAGGGCCT+TGG | 0.449057 | 4.4:-10974270 | None:intergenic |
| TGAAGGTGTGAGGGGCCTTA+GGG | 0.453292 | 4.4:+10971301 | MS.gene28050:CDS |
| AAAATCAATGAACATGGTGT+TGG | 0.455706 | 4.4:-10970133 | None:intergenic |
| TTGCATATCGGATGACAGTT+AGG | 0.457504 | 4.4:+10973659 | MS.gene28050:CDS |
| ATATTGGCGTTGGCTTCCCC+TGG | 0.469082 | 4.4:+10971221 | MS.gene28050:CDS |
| AGCTACACTTTCAACAAGCT+TGG | 0.470042 | 4.4:-10971917 | None:intergenic |
| GTAGCATTTGGACAAATTGT+TGG | 0.476872 | 4.4:-10970878 | None:intergenic |
| AAAGTTCCTTGGAGAAGCTC+AGG | 0.479407 | 4.4:-10970675 | None:intergenic |
| TTATCATACCGTCCTCCAGC+AGG | 0.479460 | 4.4:-10973165 | None:intergenic |
| CGTAGAGCTGATACAAATCC+TGG | 0.483403 | 4.4:+10973628 | MS.gene28050:CDS |
| TGAGTTTCAAGATCAAGATA+TGG | 0.484842 | 4.4:+10974001 | MS.gene28050:CDS |
| GAACATGTTATTACCTTCAG+TGG | 0.489503 | 4.4:-10973195 | None:intergenic |
| AGGGTTGGCAGCGGCAAGAA+TGG | 0.489803 | 4.4:-10973145 | None:intergenic |
| AGCTGGAAACTCTACTGCTC+AGG | 0.490744 | 4.4:+10974076 | MS.gene28050:CDS |
| CTATCTCTGATGAATATTTG+AGG | 0.491103 | 4.4:+10970193 | MS.gene28050:CDS |
| TCCTTCTTATGCTAATGAGT+GGG | 0.491510 | 4.4:+10971977 | MS.gene28050:CDS |
| TGGCTACATCAGAGATTGGT+AGG | 0.504042 | 4.4:+10970607 | MS.gene28050:CDS |
| TCAAGTGTCTAGAATGTGGT+GGG | 0.506639 | 4.4:+10970697 | MS.gene28050:CDS |
| GTAGAAGAGAAATAGACATC+AGG | 0.506918 | 4.4:+10971478 | MS.gene28050:CDS |
| CAAGATGGACATAAGAGATC+AGG | 0.507764 | 4.4:+10972965 | MS.gene28050:CDS |
| AACGATGCTGATGGTCAAGC+TGG | 0.508931 | 4.4:+10974059 | MS.gene28050:CDS |
| CTGATACAAATCCTGGCAGT+AGG | 0.511503 | 4.4:+10973635 | MS.gene28050:CDS |
| CTGGCAGTAGGGTTGCATAT+CGG | 0.513097 | 4.4:+10973647 | MS.gene28050:CDS |
| ATGAGATTGTAGAACATGCT+AGG | 0.515340 | 4.4:+10971038 | MS.gene28050:CDS |
| GTCAGCAAGCATCAAAGCGC+CGG | 0.518628 | 4.4:-10972913 | None:intergenic |
| CCCCACTCATTAGCATAAGA+AGG | 0.518823 | 4.4:-10971978 | None:intergenic |
| CAAGATATGGACGAAGAAGC+AGG | 0.521607 | 4.4:+10974014 | MS.gene28050:CDS |
| GTCAGATGCAAGAAAACTAC+TGG | 0.521796 | 4.4:+10973585 | MS.gene28050:CDS |
| TCCTCCAGCAGGGTTGGCAG+CGG | 0.522459 | 4.4:-10973154 | None:intergenic |
| ACTATTAGTATCACAAAAGC+AGG | 0.523615 | 4.4:+10973093 | MS.gene28050:CDS |
| CAAATTTACTGATTGGCAAA+GGG | 0.525128 | 4.4:+10970943 | MS.gene28050:CDS |
| TAATTACAGTTCCGTGGAGG+AGG | 0.526353 | 4.4:+10974646 | MS.gene28050:CDS |
| CTTAGCTGGGATGAAGCAAC+GGG | 0.528915 | 4.4:+10974583 | MS.gene28050:CDS |
| GCAAATTTACTGATTGGCAA+AGG | 0.529371 | 4.4:+10970942 | MS.gene28050:CDS |
| AGAGCCAGCAGGTATCTCAT+TGG | 0.529743 | 4.4:-10970984 | None:intergenic |
| CATACCTGATATATTGGCGT+TGG | 0.531733 | 4.4:+10971211 | MS.gene28050:CDS |
| GAATTGGCTACATCAGAGAT+TGG | 0.532287 | 4.4:+10970603 | MS.gene28050:CDS |
| CATTGATGAATTTGACAAGA+TGG | 0.532365 | 4.4:+10972950 | MS.gene28050:CDS |
| GGTTGCAATTCATGAGGCTA+TGG | 0.533064 | 4.4:+10973062 | MS.gene28050:intron |
| GGTGCTTCATCTGGGAATGA+AGG | 0.533732 | 4.4:+10971284 | MS.gene28050:CDS |
| ATCTGGGAATGAAGGTGTGA+GGG | 0.535862 | 4.4:+10971292 | MS.gene28050:CDS |
| TGCTAGAAATGATAGAACTT+TGG | 0.535930 | 4.4:+10974883 | MS.gene28050:CDS |
| GCTTTGATGCTTGCTGACAA+TGG | 0.535963 | 4.4:+10972918 | MS.gene28050:CDS |
| GAAAGTCATCATCTGCTGCT+GGG | 0.536220 | 4.4:+10972218 | MS.gene28050:CDS |
| CGATATGCAACCCTACTGCC+AGG | 0.536524 | 4.4:-10973646 | None:intergenic |
| TTGGCAAAGGGTCAGAATGC+AGG | 0.537253 | 4.4:+10970955 | MS.gene28050:CDS |
| GCCGCTGCCAACCCTGCTGG+AGG | 0.537734 | 4.4:+10973153 | MS.gene28050:CDS |
| TACCTGCTGGCTCTCTGCCT+AGG | 0.538550 | 4.4:+10970993 | MS.gene28050:CDS |
| CAGGAAGCCGCTGGAACCAA+TGG | 0.541233 | 4.4:+10974095 | MS.gene28050:CDS |
| CTCTGACTCCCAAAGCCCTA+AGG | 0.541676 | 4.4:-10971316 | None:intergenic |
| GTACAATGTGGCTCTTCCAC+CGG | 0.541952 | 4.4:+10973291 | MS.gene28050:intron |
| AACGCAAGGGTGCTTCATCT+GGG | 0.544757 | 4.4:+10971276 | MS.gene28050:CDS |
| AGACATCAGGAATAGAAAGA+AGG | 0.549012 | 4.4:+10971491 | MS.gene28050:CDS |
| TAGGGAAGCTTCTCAACGCA+AGG | 0.550312 | 4.4:+10971262 | MS.gene28050:CDS |
| ATGAAGGCATCAGCCTTAGA+GGG | 0.551495 | 4.4:+10972016 | MS.gene28050:CDS |
| CTGCCAACCCTGCTGGAGGA+CGG | 0.553709 | 4.4:+10973157 | MS.gene28050:CDS |
| TGGATGAAGTTCAAAGAATG+AGG | 0.554379 | 4.4:+10971875 | MS.gene28050:CDS |
| AGTTCTGCTGTAGTGAACGT+TGG | 0.559838 | 4.4:-10973433 | None:intergenic |
| TTCAACTTTCGCCTCCTCCA+CGG | 0.560026 | 4.4:-10974657 | None:intergenic |
| TGATCGTGATAGATGATGGC+AGG | 0.560237 | 4.4:+10974816 | MS.gene28050:CDS |
| GAGAGAGATCAGAATGTCGT+AGG | 0.562049 | 4.4:+10971243 | MS.gene28050:CDS |
| TTGCAGGAAGTGGCTTAGCT+GGG | 0.562532 | 4.4:+10974570 | MS.gene28050:intron |
| TCGGATGACAGTTAGGCAGT+TGG | 0.563427 | 4.4:+10973666 | MS.gene28050:CDS |
| CAGGATTTGTATCAGCTCTA+CGG | 0.565166 | 4.4:-10973627 | None:intergenic |
| AATTGAGACTTTGCACAGCT+AGG | 0.566095 | 4.4:-10972066 | None:intergenic |
| TTCTTTGTTTCAGTACAATG+TGG | 0.566629 | 4.4:+10973279 | MS.gene28050:intron |
| CATTTGATCGTGATAGATGA+TGG | 0.566869 | 4.4:+10974812 | MS.gene28050:CDS |
| ACTTGCAGAATGCCTGCAAG+AGG | 0.569621 | 4.4:+10970329 | MS.gene28050:CDS |
| CTGTAACAGGAGTGGTAACA+AGG | 0.572546 | 4.4:+10970637 | MS.gene28050:CDS |
| TCAAACCTTGAAAGTATAGC+CGG | 0.573082 | 4.4:-10973310 | None:intergenic |
| GACCTAGGCAGAGAGCCAGC+AGG | 0.575423 | 4.4:-10970995 | None:intergenic |
| GGAAGCTTTAATCAGGCTGT+CGG | 0.576059 | 4.4:+10973687 | MS.gene28050:CDS |
| TAACTGATGAATACTTTCAA+AGG | 0.576649 | 4.4:+10974243 | MS.gene28050:CDS |
| GCTTAGCTGGGATGAAGCAA+CGG | 0.577228 | 4.4:+10974582 | MS.gene28050:CDS |
| ATACCGTCCTCCAGCAGGGT+TGG | 0.577304 | 4.4:-10973160 | None:intergenic |
| GGTTTGTTCCAGATTTGTGA+TGG | 0.579414 | 4.4:+10971456 | MS.gene28050:intron |
| AGAGAGATCAGAATGTCGTA+GGG | 0.583410 | 4.4:+10971244 | MS.gene28050:CDS |
| GACATTCTGATCTCTCTCCA+GGG | 0.583538 | 4.4:-10971238 | None:intergenic |
| TGATAAGTCTAAACCACTGA+AGG | 0.585685 | 4.4:+10973182 | MS.gene28050:CDS |
| ATAACATTCCAATTGTCAAG+AGG | 0.586980 | 4.4:+10970422 | MS.gene28050:CDS |
| CACCTCACCATTGGTTCCAG+CGG | 0.588414 | 4.4:-10974102 | None:intergenic |
| TAAAAGCAAGTCGGTAGGAG+AGG | 0.589366 | 4.4:-10971340 | None:intergenic |
| ACGTCCAATGAGATACCTGC+TGG | 0.590348 | 4.4:+10970980 | MS.gene28050:CDS |
| CCTTCTTATGCTAATGAGTG+GGG | 0.592758 | 4.4:+10971978 | MS.gene28050:CDS |
| ATGTAACAACAGAGCAAAGT+GGG | 0.595789 | 4.4:+10970901 | MS.gene28050:CDS |
| ATAACGAACCTGAACAGAGT+TGG | 0.596640 | 4.4:-10971366 | None:intergenic |
| TCTACTGCTCAGGAAGCCGC+TGG | 0.597751 | 4.4:+10974086 | MS.gene28050:CDS |
| GGCTGTCGGAGGCCATTGCA+AGG | 0.600168 | 4.4:+10973701 | MS.gene28050:CDS |
| AAATGATAGAACTTTGGCTG+TGG | 0.600445 | 4.4:+10974889 | MS.gene28050:CDS |
| TGATACAAATCCTGGCAGTA+GGG | 0.600996 | 4.4:+10973636 | MS.gene28050:CDS |
| GTTCACAAATCTACTCATGA+AGG | 0.603800 | 4.4:+10972000 | MS.gene28050:CDS |
| TGAGATTGTAGAACATGCTA+GGG | 0.603809 | 4.4:+10971039 | MS.gene28050:CDS |
| GTTCGACCTGAGCTTCTCCA+AGG | 0.607207 | 4.4:+10970669 | MS.gene28050:CDS |
| CATCTGGGAATGAAGGTGTG+AGG | 0.608451 | 4.4:+10971291 | MS.gene28050:CDS |
| ATCCAGATGACACCTTGCAA+TGG | 0.610507 | 4.4:-10973713 | None:intergenic |
| ATTGTAGAACATGCTAGGGC+TGG | 0.615899 | 4.4:+10971043 | MS.gene28050:CDS |
| TTCAAGTGTCTAGAATGTGG+TGG | 0.616955 | 4.4:+10970696 | MS.gene28050:CDS |
| GCTGTCTAAGACGCATGACA+AGG | 0.617928 | 4.4:-10974277 | None:intergenic |
| AGCTTTAATCAGGCTGTCGG+AGG | 0.618052 | 4.4:+10973690 | MS.gene28050:CDS |
| ATCCTTCTTATGCTAATGAG+TGG | 0.618694 | 4.4:+10971976 | MS.gene28050:CDS |
| ATTGAAGGTTGCAATTCATG+AGG | 0.621895 | 4.4:+10973056 | MS.gene28050:intron |
| GTTGACTGCAACTGTTGCCA+AGG | 0.630299 | 4.4:+10972240 | MS.gene28050:CDS |
| GGTAATCTGTAACATCGTCT+GGG | 0.631041 | 4.4:-10973357 | None:intergenic |
| GGCAATAAAAGCAAGTCGGT+AGG | 0.631539 | 4.4:-10971345 | None:intergenic |
| GAGGAGACCGTAATGCAAGA+AGG | 0.631602 | 4.4:+10974302 | MS.gene28050:CDS |
| AATGATAATAACGATGCTGA+TGG | 0.632424 | 4.4:+10974050 | MS.gene28050:CDS |
| AGAATAACATCCAATGACCT+AGG | 0.632771 | 4.4:-10971010 | None:intergenic |
| ACTGCTAAACGAACATGACG+AGG | 0.634306 | 4.4:-10973836 | None:intergenic |
| CAAGTGTCTAGAATGTGGTG+GGG | 0.638582 | 4.4:+10970698 | MS.gene28050:CDS |
| GAAGAAGCAGGTAGTGACGA+TGG | 0.642853 | 4.4:+10974026 | MS.gene28050:CDS |
| TCTGGGAATGAAGGTGTGAG+GGG | 0.644966 | 4.4:+10971293 | MS.gene28050:CDS |
| CTGTCTAAGACGCATGACAA+GGG | 0.646104 | 4.4:-10974276 | None:intergenic |
| ATGTTCAAAATCAATGAACA+TGG | 0.646880 | 4.4:-10970139 | None:intergenic |
| TTATCATCAGAAATGAATGT+CGG | 0.648409 | 4.4:-10970370 | None:intergenic |
| AACCTTGAAAGTATAGCCGG+TGG | 0.648631 | 4.4:-10973307 | None:intergenic |
| GCTTGTATCTGTAACAGGAG+TGG | 0.649403 | 4.4:+10970629 | MS.gene28050:CDS |
| AGGGAAGCTTCTCAACGCAA+GGG | 0.651545 | 4.4:+10971263 | MS.gene28050:CDS |
| ACTTTCAAGTGTCTAGAATG+TGG | 0.654394 | 4.4:+10970693 | MS.gene28050:CDS |
| TATCATACCGTCCTCCAGCA+GGG | 0.656611 | 4.4:-10973164 | None:intergenic |
| GCACAATATGAGAAGCTATG+TGG | 0.660506 | 4.4:-10973378 | None:intergenic |
| TTCTGATGATAACCCTAACA+AGG | 0.660674 | 4.4:+10970381 | MS.gene28050:CDS |
| TGAAGGCATCAGCCTTAGAG+GGG | 0.664188 | 4.4:+10972017 | MS.gene28050:CDS |
| CATGCGTCTTAGACAGCACG+AGG | 0.667096 | 4.4:+10974283 | MS.gene28050:CDS |
| CATGTAACAACAGAGCAAAG+TGG | 0.668775 | 4.4:+10970900 | MS.gene28050:CDS |
| AGTGGTAACAAGGACAAGTG+AGG | 0.673592 | 4.4:+10970647 | MS.gene28050:CDS |
| AGTTGGCAATAAAAGCAAGT+CGG | 0.673960 | 4.4:-10971349 | None:intergenic |
| ACATTCTGATCTCTCTCCAG+GGG | 0.682522 | 4.4:-10971237 | None:intergenic |
| AAATAATTACAGTTCCGTGG+AGG | 0.693918 | 4.4:+10974643 | MS.gene28050:CDS |
| ACAGCAATTCAAGTATACTG+AGG | 0.742350 | 4.4:+10970737 | MS.gene28050:CDS |
| ATACTTTCAAAGGATCACCA+AGG | 0.772896 | 4.4:+10974253 | MS.gene28050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAATTAGTATATTTAT+TGG | + | chr4.4:10974733-10974752 | MS.gene28050:intron | 10.0% |
| !!! | TTAAATTCTAAAATTTATTC+AGG | + | chr4.4:10974414-10974433 | MS.gene28050:intron | 10.0% |
| !!! | TTGTTTTAAATTTCTATTTT+GGG | + | chr4.4:10973905-10973924 | MS.gene28050:intron | 10.0% |
| !!! | TTTGTTTTAAATTTCTATTT+TGG | + | chr4.4:10973904-10973923 | MS.gene28050:intron | 10.0% |
| !! | AAATATACTAATTTCTTTGA+AGG | - | chr4.4:10974731-10974750 | None:intergenic | 15.0% |
| !! | AATAGATTGATAAATATTAG+GGG | - | chr4.4:10971717-10971736 | None:intergenic | 15.0% |
| !! | AATTTCAATAAAAATCCAAT+TGG | - | chr4.4:10970229-10970248 | None:intergenic | 15.0% |
| !! | CAATAGATTGATAAATATTA+GGG | - | chr4.4:10971718-10971737 | None:intergenic | 15.0% |
| !! | GTCTTATATTATGAATAATA+CGG | + | chr4.4:10970796-10970815 | MS.gene28050:intron | 15.0% |
| !! | TTATTCATAATATAAGACTA+CGG | - | chr4.4:10970794-10970813 | None:intergenic | 15.0% |
| !! | TTGTTTATATAAAACAATGT+CGG | + | chr4.4:10974480-10974499 | MS.gene28050:intron | 15.0% |
| !! | TTTATATAAACAAATCTCAA+AGG | - | chr4.4:10974473-10974492 | None:intergenic | 15.0% |
| !!! | CAAAATAATACCAAATTTTA+GGG | - | chr4.4:10970259-10970278 | None:intergenic | 15.0% |
| !!! | CTAAAATTTGGTATTATTTT+GGG | + | chr4.4:10970258-10970277 | MS.gene28050:intron | 15.0% |
| !!! | TTTTATGCTATACTTTATAT+CGG | - | chr4.4:10972737-10972756 | None:intergenic | 15.0% |
| !! | AATGTAAACTTTATGGAATT+TGG | + | chr4.4:10971122-10971141 | MS.gene28050:intron | 20.0% |
| !! | ATAGATTGATAAATATTAGG+GGG | - | chr4.4:10971716-10971735 | None:intergenic | 20.0% |
| !! | ATTTGATAAAGCACAATAAT+AGG | + | chr4.4:10972523-10972542 | MS.gene28050:intron | 20.0% |
| !! | GATAAAATTTACTTATTCAC+TGG | + | chr4.4:10974159-10974178 | MS.gene28050:intron | 20.0% |
| !! | GCAATAGATTGATAAATATT+AGG | - | chr4.4:10971719-10971738 | None:intergenic | 20.0% |
| !! | GTAATCAAAGAAAAATAGAA+AGG | - | chr4.4:10972105-10972124 | None:intergenic | 20.0% |
| !! | TATTCATAATATAAGACTAC+GGG | - | chr4.4:10970793-10970812 | None:intergenic | 20.0% |
| !!! | AATTATTTTTCTCATTTTGC+TGG | - | chr4.4:10974631-10974650 | None:intergenic | 20.0% |
| !!! | CCAAAATAATACCAAATTTT+AGG | - | chr4.4:10970260-10970279 | None:intergenic | 20.0% |
| !!! | CCTAAAATTTGGTATTATTT+TGG | + | chr4.4:10970257-10970276 | MS.gene28050:intron | 20.0% |
| !!! | CTCTATAATTGCTTTAATTT+GGG | - | chr4.4:10974687-10974706 | None:intergenic | 20.0% |
| !!! | GTATTTTAATTTGCAAATTG+AGG | + | chr4.4:10970497-10970516 | MS.gene28050:intron | 20.0% |
| !!! | TACAGTAGATTTTTTTCTTT+GGG | - | chr4.4:10974225-10974244 | None:intergenic | 20.0% |
| !!! | TGATAAATATGTTTTCTGTA+TGG | + | chr4.4:10971435-10971454 | MS.gene28050:intron | 20.0% |
| !!! | TTACAGTAGATTTTTTTCTT+TGG | - | chr4.4:10974226-10974245 | None:intergenic | 20.0% |
| ! | AAAGAAAAATGAACAGGTTA+AGG | - | chr4.4:10971745-10971764 | None:intergenic | 25.0% |
| ! | AAAGATGAATTCAAAACAAG+TGG | + | chr4.4:10972801-10972820 | MS.gene28050:intron | 25.0% |
| ! | AAGATGAATTCAAAACAAGT+GGG | + | chr4.4:10972802-10972821 | MS.gene28050:intron | 25.0% |
| ! | AATGTGAACTCAAAATCAAA+CGG | - | chr4.4:10971583-10971602 | None:intergenic | 25.0% |
| ! | AATTGTCATACCTGATATAT+TGG | + | chr4.4:10971205-10971224 | MS.gene28050:CDS | 25.0% |
| ! | AATTTAAATTTGCCAAACCA+AGG | - | chr4.4:10972440-10972459 | None:intergenic | 25.0% |
| ! | ATGTTCAAAATCAATGAACA+TGG | - | chr4.4:10970142-10970161 | None:intergenic | 25.0% |
| ! | ATTACTGAAACCCTAAAATT+TGG | + | chr4.4:10970246-10970265 | MS.gene28050:intron | 25.0% |
| ! | ATTGTACTGAAACAAAGAAA+GGG | - | chr4.4:10973278-10973297 | None:intergenic | 25.0% |
| ! | CAATAAGGTAATTAATAACC+AGG | - | chr4.4:10973227-10973246 | None:intergenic | 25.0% |
| ! | CCAAATTAAAGCAATTATAG+AGG | + | chr4.4:10974685-10974704 | MS.gene28050:CDS | 25.0% |
| ! | CCTCTATAATTGCTTTAATT+TGG | - | chr4.4:10974688-10974707 | None:intergenic | 25.0% |
| ! | GTACTGAAATGTAAACTTTA+TGG | + | chr4.4:10971115-10971134 | MS.gene28050:intron | 25.0% |
| ! | GTTAAGAATTAAGTTAGAGT+AGG | + | chr4.4:10972619-10972638 | MS.gene28050:intron | 25.0% |
| ! | TAACGAAATGAAAACGAAAT+TGG | - | chr4.4:10970464-10970483 | None:intergenic | 25.0% |
| ! | TAACTGATGAATACTTTCAA+AGG | + | chr4.4:10974243-10974262 | MS.gene28050:CDS | 25.0% |
| ! | TAAGTAAGAAAGAAGCAAAA+AGG | - | chr4.4:10973545-10973564 | None:intergenic | 25.0% |
| ! | TGTGTTAAAGAAAAATGAAC+AGG | - | chr4.4:10971751-10971770 | None:intergenic | 25.0% |
| ! | TTACCTTATTGAGTTTAACT+TGG | + | chr4.4:10973236-10973255 | MS.gene28050:intron | 25.0% |
| ! | TTATCATCAGAAATGAATGT+CGG | - | chr4.4:10970373-10970392 | None:intergenic | 25.0% |
| ! | TTGAAAAGTTAAAGCAGATT+CGG | - | chr4.4:10971092-10971111 | None:intergenic | 25.0% |
| ! | TTTATCAAACATGAATTGAG+AGG | + | chr4.4:10972761-10972780 | MS.gene28050:intron | 25.0% |
| !! | ATTGAAAGTTGAATTTTCTG+TGG | + | chr4.4:10974538-10974557 | MS.gene28050:intron | 25.0% |
| !! | CGATTTTCTGATTTTATAAC+AGG | + | chr4.4:10973808-10973827 | MS.gene28050:intron | 25.0% |
| !! | TTGAAAGTTGAATTTTCTGT+GGG | + | chr4.4:10974539-10974558 | MS.gene28050:intron | 25.0% |
| !!! | ACAGTAGATTTTTTTCTTTG+GGG | - | chr4.4:10974224-10974243 | None:intergenic | 25.0% |
| !!! | ATTTTTTTACTGGCATTTGA+GGG | + | chr4.4:10973000-10973019 | MS.gene28050:intron | 25.0% |
| !!! | GAAAGTATCTCATATTTGAT+TGG | + | chr4.4:10973033-10973052 | MS.gene28050:intron | 25.0% |
| !!! | GGCTTTAATCTACATATTTT+AGG | + | chr4.4:10971668-10971687 | MS.gene28050:intron | 25.0% |
| !!! | TAGATTTTAATTCGAAGAGA+GGG | + | chr4.4:10974788-10974807 | MS.gene28050:intron | 25.0% |
| !!! | TGAGGTATTTTTTTTCCAAT+TGG | + | chr4.4:10970211-10970230 | MS.gene28050:intron | 25.0% |
| !!! | TTATGTAAGAACTTGTTTTC+AGG | + | chr4.4:10972890-10972909 | MS.gene28050:intron | 25.0% |
| !!! | TTGAACACTGCTTTTTATTT+TGG | + | chr4.4:10973498-10973517 | MS.gene28050:intron | 25.0% |
| !!! | TTGGTTTGGCAAATTTAAAT+TGG | + | chr4.4:10972439-10972458 | MS.gene28050:intron | 25.0% |
| AAAATCAATGAACATGGTGT+TGG | - | chr4.4:10970136-10970155 | None:intergenic | 30.0% | |
| AAATATTAGGGGGAAATAAC+AGG | - | chr4.4:10971706-10971725 | None:intergenic | 30.0% | |
| AAGAGAGCAAATTTACTGAT+TGG | + | chr4.4:10970936-10970955 | MS.gene28050:CDS | 30.0% | |
| AATATTAGGGGGAAATAACA+GGG | - | chr4.4:10971705-10971724 | None:intergenic | 30.0% | |
| AATGATAATAACGATGCTGA+TGG | + | chr4.4:10974050-10974069 | MS.gene28050:CDS | 30.0% | |
| ACTATTAGTATCACAAAAGC+AGG | + | chr4.4:10973093-10973112 | MS.gene28050:CDS | 30.0% | |
| ATAACATTCCAATTGTCAAG+AGG | + | chr4.4:10970422-10970441 | MS.gene28050:CDS | 30.0% | |
| CAACATTGATATCCTTGTTA+GGG | - | chr4.4:10970396-10970415 | None:intergenic | 30.0% | |
| CAACTTTCAATATGATCACA+TGG | - | chr4.4:10974529-10974548 | None:intergenic | 30.0% | |
| CATTGATGAATTTGACAAGA+TGG | + | chr4.4:10972950-10972969 | MS.gene28050:CDS | 30.0% | |
| CATTGTACTGAAACAAAGAA+AGG | - | chr4.4:10973279-10973298 | None:intergenic | 30.0% | |
| CTATCTCTGATGAATATTTG+AGG | + | chr4.4:10970193-10970212 | MS.gene28050:CDS | 30.0% | |
| CTCATATTTGATTGGATTGA+AGG | + | chr4.4:10973041-10973060 | MS.gene28050:intron | 30.0% | |
| GAAAAATAATTACAGTTCCG+TGG | + | chr4.4:10974640-10974659 | MS.gene28050:CDS | 30.0% | |
| GAAAGGGCAAAAACTAAATT+AGG | - | chr4.4:10973262-10973281 | None:intergenic | 30.0% | |
| GACAATTGGAATGTTATAGA+AGG | - | chr4.4:10970419-10970438 | None:intergenic | 30.0% | |
| GACATAAACGTTTGTATTGT+TGG | + | chr4.4:10972039-10972058 | MS.gene28050:CDS | 30.0% | |
| GCAAACTTCTATAATAAGGT+AGG | + | chr4.4:10973868-10973887 | MS.gene28050:intron | 30.0% | |
| GTTAAAACCTTCTTGCATTA+CGG | - | chr4.4:10974312-10974331 | None:intergenic | 30.0% | |
| TCAAGCACTTTATCATTATC+TGG | + | chr4.4:10972836-10972855 | MS.gene28050:intron | 30.0% | |
| TCATGTATGGTTATCATTTC+AGG | + | chr4.4:10972155-10972174 | MS.gene28050:intron | 30.0% | |
| TGAAAAGTTAAAGCAGATTC+GGG | - | chr4.4:10971091-10971110 | None:intergenic | 30.0% | |
| TGAATATACCTCTTGACAAT+TGG | - | chr4.4:10970433-10970452 | None:intergenic | 30.0% | |
| TGAGTTTCAAGATCAAGATA+TGG | + | chr4.4:10974001-10974020 | MS.gene28050:CDS | 30.0% | |
| TGCAAAAACTCTTAAACCAA+AGG | + | chr4.4:10973474-10973493 | MS.gene28050:CDS | 30.0% | |
| TGCTAGAAATGATAGAACTT+TGG | + | chr4.4:10974883-10974902 | MS.gene28050:CDS | 30.0% | |
| TGCTGCAAACTTCTATAATA+AGG | + | chr4.4:10973864-10973883 | MS.gene28050:CDS | 30.0% | |
| TTCATTTGTGTTTGTATCCT+TGG | + | chr4.4:10972420-10972439 | MS.gene28050:intron | 30.0% | |
| TTCTTTGATTACTTTCATGC+TGG | + | chr4.4:10972113-10972132 | MS.gene28050:intron | 30.0% | |
| ! | AATAGGATTAGAGTTGCTTT+AGG | + | chr4.4:10972540-10972559 | MS.gene28050:intron | 30.0% |
| ! | AATCAGTAAATTTGCTCTCT+TGG | - | chr4.4:10970937-10970956 | None:intergenic | 30.0% |
| ! | AGTTGAATCTGGTTTAAACT+AGG | - | chr4.4:10972481-10972500 | None:intergenic | 30.0% |
| ! | ATTACAACTCGCAAACATTT+TGG | - | chr4.4:10972694-10972713 | None:intergenic | 30.0% |
| ! | ATTTGACTGGTTGATTTAAC+AGG | + | chr4.4:10971843-10971862 | MS.gene28050:intron | 30.0% |
| ! | CAAATTTACTGATTGGCAAA+GGG | + | chr4.4:10970943-10970962 | MS.gene28050:CDS | 30.0% |
| ! | CAGGTGTTTAATGATTTTAG+AGG | + | chr4.4:10973739-10973758 | MS.gene28050:intron | 30.0% |
| ! | TAATTTGCAAATTGAGGCTT+TGG | + | chr4.4:10970503-10970522 | MS.gene28050:intron | 30.0% |
| ! | TCTTGATGACCAAAAATAGT+TGG | - | chr4.4:10971943-10971962 | None:intergenic | 30.0% |
| ! | TGGTTTAAGAGTTTTTGCAT+AGG | - | chr4.4:10973473-10973492 | None:intergenic | 30.0% |
| ! | TTAGGTTTAAAATTACTGCC+TGG | + | chr4.4:10972558-10972577 | MS.gene28050:intron | 30.0% |
| ! | TTCTTTGTTTCAGTACAATG+TGG | + | chr4.4:10973279-10973298 | MS.gene28050:intron | 30.0% |
| ! | TTGTATATGTTTTCCTTAGC+TGG | + | chr4.4:10973777-10973796 | MS.gene28050:intron | 30.0% |
| ! | TTTTTATAGGCTAAGGGAAT+TGG | + | chr4.4:10970587-10970606 | MS.gene28050:intron | 30.0% |
| !! | ACTTTATATCGGTTTCTGAA+TGG | - | chr4.4:10972726-10972745 | None:intergenic | 30.0% |
| !! | TCGATGTTTTTATAGGCTAA+GGG | + | chr4.4:10970581-10970600 | MS.gene28050:intron | 30.0% |
| !! | TCTGTGTTCGATGTTTTTAT+AGG | + | chr4.4:10970574-10970593 | MS.gene28050:intron | 30.0% |
| !! | TGTTTAATGATTTTAGAGGC+TGG | + | chr4.4:10973743-10973762 | MS.gene28050:intron | 30.0% |
| !! | TTCGATGTTTTTATAGGCTA+AGG | + | chr4.4:10970580-10970599 | MS.gene28050:intron | 30.0% |
| !! | TTTGTGTTGTTGTTGATGAT+AGG | + | chr4.4:10970296-10970315 | MS.gene28050:intron | 30.0% |
| !!! | AGATTTTAATTCGAAGAGAG+GGG | + | chr4.4:10974789-10974808 | MS.gene28050:intron | 30.0% |
| !!! | CAGTAGATTTTTTTCTTTGG+GGG | - | chr4.4:10974223-10974242 | None:intergenic | 30.0% |
| !!! | CATTTTTTTACTGGCATTTG+AGG | + | chr4.4:10972999-10973018 | MS.gene28050:intron | 30.0% |
| !!! | GTAGATTTTAATTCGAAGAG+AGG | + | chr4.4:10974787-10974806 | MS.gene28050:intron | 30.0% |
| !!! | TCATTGATTCACTATTTTCC+AGG | - | chr4.4:10972579-10972598 | None:intergenic | 30.0% |
| AAAAGCAGTGTTCAAACCTT+TGG | - | chr4.4:10973493-10973512 | None:intergenic | 35.0% | |
| AAATAATTACAGTTCCGTGG+AGG | + | chr4.4:10974643-10974662 | MS.gene28050:CDS | 35.0% | |
| AAATGATAGAACTTTGGCTG+TGG | + | chr4.4:10974889-10974908 | MS.gene28050:CDS | 35.0% | |
| AATAACATGTTCTGCTAACC+TGG | + | chr4.4:10973206-10973225 | MS.gene28050:intron | 35.0% | |
| AATGCTTAGTTCAGAATCCA+TGG | - | chr4.4:10972671-10972690 | None:intergenic | 35.0% | |
| AATTCATCTTTACCGAACTC+AGG | - | chr4.4:10972792-10972811 | None:intergenic | 35.0% | |
| ACAGCAATTCAAGTATACTG+AGG | + | chr4.4:10970737-10970756 | MS.gene28050:CDS | 35.0% | |
| ACAGTAGAACTAGTTGAATC+TGG | - | chr4.4:10972492-10972511 | None:intergenic | 35.0% | |
| AGAATAACATCCAATGACCT+AGG | - | chr4.4:10971013-10971032 | None:intergenic | 35.0% | |
| AGACATCAGGAATAGAAAGA+AGG | + | chr4.4:10971491-10971510 | MS.gene28050:CDS | 35.0% | |
| AGACGATTGCAAGGTAAAAT+GGG | - | chr4.4:10974135-10974154 | None:intergenic | 35.0% | |
| AGCAACGGGATTTGATTAAA+TGG | + | chr4.4:10974597-10974616 | MS.gene28050:CDS | 35.0% | |
| AGGCCAAGTTAAACTCAATA+AGG | - | chr4.4:10973242-10973261 | None:intergenic | 35.0% | |
| AGTTGGCAATAAAAGCAAGT+CGG | - | chr4.4:10971352-10971371 | None:intergenic | 35.0% | |
| ATACAAAACTCTCCAGTTTC+TGG | - | chr4.4:10972268-10972287 | None:intergenic | 35.0% | |
| ATACTTTCAAAGGATCACCA+AGG | + | chr4.4:10974253-10974272 | MS.gene28050:CDS | 35.0% | |
| ATCCTTCTTATGCTAATGAG+TGG | + | chr4.4:10971976-10971995 | MS.gene28050:CDS | 35.0% | |
| ATCTGCAATTCACTGTAAGT+TGG | + | chr4.4:10971529-10971548 | MS.gene28050:intron | 35.0% | |
| ATGAGATTGTAGAACATGCT+AGG | + | chr4.4:10971038-10971057 | MS.gene28050:CDS | 35.0% | |
| ATGTAACAACAGAGCAAAGT+GGG | + | chr4.4:10970901-10970920 | MS.gene28050:CDS | 35.0% | |
| ATTGAAGGTTGCAATTCATG+AGG | + | chr4.4:10973056-10973075 | MS.gene28050:intron | 35.0% | |
| CAACCAGTCAAATATAGTGT+TGG | - | chr4.4:10971836-10971855 | None:intergenic | 35.0% | |
| CAATATGATCACATGGAGTT+TGG | - | chr4.4:10974522-10974541 | None:intergenic | 35.0% | |
| CATTTGATCGTGATAGATGA+TGG | + | chr4.4:10974812-10974831 | MS.gene28050:CDS | 35.0% | |
| CGAATTGAATGGATCATGTA+TGG | + | chr4.4:10972142-10972161 | MS.gene28050:intron | 35.0% | |
| CTGTTGTTACATGTAGCATT+TGG | - | chr4.4:10970893-10970912 | None:intergenic | 35.0% | |
| CTTCCACTAATACAAAAGAG+CGG | - | chr4.4:10972307-10972326 | None:intergenic | 35.0% | |
| GAAAAGTTAAAGCAGATTCG+GGG | - | chr4.4:10971090-10971109 | None:intergenic | 35.0% | |
| GAACATGTTATTACCTTCAG+TGG | - | chr4.4:10973198-10973217 | None:intergenic | 35.0% | |
| GCAACATTGATATCCTTGTT+AGG | - | chr4.4:10970397-10970416 | None:intergenic | 35.0% | |
| GTAAAAATCACCCTGCAAAT+TGG | - | chr4.4:10971176-10971195 | None:intergenic | 35.0% | |
| GTAGAAGAGAAATAGACATC+AGG | + | chr4.4:10971478-10971497 | MS.gene28050:CDS | 35.0% | |
| GTAGCATTTGGACAAATTGT+TGG | - | chr4.4:10970881-10970900 | None:intergenic | 35.0% | |
| GTTCACAAATCTACTCATGA+AGG | + | chr4.4:10972000-10972019 | MS.gene28050:CDS | 35.0% | |
| TAGACGATTGCAAGGTAAAA+TGG | - | chr4.4:10974136-10974155 | None:intergenic | 35.0% | |
| TCCTTCTTATGCTAATGAGT+GGG | + | chr4.4:10971977-10971996 | MS.gene28050:CDS | 35.0% | |
| TGACCAACACTATATTTGAC+TGG | + | chr4.4:10971830-10971849 | MS.gene28050:intron | 35.0% | |
| TGAGATTGTAGAACATGCTA+GGG | + | chr4.4:10971039-10971058 | MS.gene28050:CDS | 35.0% | |
| TGATAAGTCTAAACCACTGA+AGG | + | chr4.4:10973182-10973201 | MS.gene28050:CDS | 35.0% | |
| TGGATGAAGTTCAAAGAATG+AGG | + | chr4.4:10971875-10971894 | MS.gene28050:CDS | 35.0% | |
| TTCTGATGATAACCCTAACA+AGG | + | chr4.4:10970381-10970400 | MS.gene28050:CDS | 35.0% | |
| TTGTGTTTGTATCCTTGGTT+TGG | + | chr4.4:10972425-10972444 | MS.gene28050:intron | 35.0% | |
| TTTACCTTGCAATCGTCTAT+GGG | + | chr4.4:10974137-10974156 | MS.gene28050:intron | 35.0% | |
| ! | ACTTTCAAGTGTCTAGAATG+TGG | + | chr4.4:10970693-10970712 | MS.gene28050:CDS | 35.0% |
| ! | AGTGTAGCTCCAACTATTTT+TGG | + | chr4.4:10971931-10971950 | MS.gene28050:CDS | 35.0% |
| ! | ATTTGCAGGGTGATTTTTAC+TGG | + | chr4.4:10971176-10971195 | MS.gene28050:intron | 35.0% |
| ! | GCAAATTTACTGATTGGCAA+AGG | + | chr4.4:10970942-10970961 | MS.gene28050:CDS | 35.0% |
| ! | TCAAACCTTGAAAGTATAGC+CGG | - | chr4.4:10973313-10973332 | None:intergenic | 35.0% |
| ! | TTTTACCTTGCAATCGTCTA+TGG | + | chr4.4:10974136-10974155 | MS.gene28050:intron | 35.0% |
| ! | TTTTATTGCCAACTCTGTTC+AGG | + | chr4.4:10971358-10971377 | MS.gene28050:CDS | 35.0% |
| !! | AACTGGAGAGTTTTGTATTG+AGG | + | chr4.4:10972270-10972289 | MS.gene28050:CDS | 35.0% |
| !! | TTATTCAGGTTCTGAACATC+TGG | + | chr4.4:10974428-10974447 | MS.gene28050:intron | 35.0% |
| !!! | AGAGGCATGCATTTTTTTAC+TGG | + | chr4.4:10972990-10973009 | MS.gene28050:intron | 35.0% |
| !!! | TACTTTTTTTCCTTGCAGAG+TGG | + | chr4.4:10973956-10973975 | MS.gene28050:intron | 35.0% |
| AAACGTTTATGTCCCCTCTA+AGG | - | chr4.4:10972032-10972051 | None:intergenic | 40.0% | |
| AATCGTCTTTAGACCAGCTA+AGG | - | chr4.4:10973793-10973812 | None:intergenic | 40.0% | |
| AATTGAGACTTTGCACAGCT+AGG | - | chr4.4:10972069-10972088 | None:intergenic | 40.0% | |
| AGAGAGATCAGAATGTCGTA+GGG | + | chr4.4:10971244-10971263 | MS.gene28050:CDS | 40.0% | |
| AGCTACACTTTCAACAAGCT+TGG | - | chr4.4:10971920-10971939 | None:intergenic | 40.0% | |
| ATAACGAACCTGAACAGAGT+TGG | - | chr4.4:10971369-10971388 | None:intergenic | 40.0% | |
| ATAAGTTTGTCTGTCCACCA+TGG | + | chr4.4:10972651-10972670 | MS.gene28050:intron | 40.0% | |
| CAAGATGGACATAAGAGATC+AGG | + | chr4.4:10972965-10972984 | MS.gene28050:CDS | 40.0% | |
| CACAAACTGTCCAATTTGCA+GGG | + | chr4.4:10971163-10971182 | MS.gene28050:intron | 40.0% | |
| CAGGATTTGTATCAGCTCTA+CGG | - | chr4.4:10973630-10973649 | None:intergenic | 40.0% | |
| CATACCTGATATATTGGCGT+TGG | + | chr4.4:10971211-10971230 | MS.gene28050:CDS | 40.0% | |
| CATGTAACAACAGAGCAAAG+TGG | + | chr4.4:10970900-10970919 | MS.gene28050:CDS | 40.0% | |
| CCAAGATCTGTGTATACATC+TGG | + | chr4.4:10972196-10972215 | MS.gene28050:CDS | 40.0% | |
| CCAGATGTATACACAGATCT+TGG | - | chr4.4:10972199-10972218 | None:intergenic | 40.0% | |
| CCTTCTTATGCTAATGAGTG+GGG | + | chr4.4:10971978-10971997 | MS.gene28050:CDS | 40.0% | |
| CTAGACACTTGAAAGTTCCT+TGG | - | chr4.4:10970689-10970708 | None:intergenic | 40.0% | |
| CTCTTCTACCATCACAAATC+TGG | - | chr4.4:10971467-10971486 | None:intergenic | 40.0% | |
| GAATTGGCTACATCAGAGAT+TGG | + | chr4.4:10970603-10970622 | MS.gene28050:CDS | 40.0% | |
| GACATAAGAGATCAGGTAAG+AGG | + | chr4.4:10972972-10972991 | MS.gene28050:intron | 40.0% | |
| GATTGCAAGGTAAAATGGGT+AGG | - | chr4.4:10974131-10974150 | None:intergenic | 40.0% | |
| GCACAATATGAGAAGCTATG+TGG | - | chr4.4:10973381-10973400 | None:intergenic | 40.0% | |
| GCACACATACATGATGTTCT+CGG | + | chr4.4:10971779-10971798 | MS.gene28050:intron | 40.0% | |
| GGTAATCTGTAACATCGTCT+GGG | - | chr4.4:10973360-10973379 | None:intergenic | 40.0% | |
| GGTTTATCTATTGCAGGAAG+TGG | + | chr4.4:10974560-10974579 | MS.gene28050:intron | 40.0% | |
| GTCAGATGCAAGAAAACTAC+TGG | + | chr4.4:10973585-10973604 | MS.gene28050:CDS | 40.0% | |
| TATATGCAACACCAGTCAGT+TGG | - | chr4.4:10971620-10971639 | None:intergenic | 40.0% | |
| TCTGTGGGTTTATCTATTGC+AGG | + | chr4.4:10974554-10974573 | MS.gene28050:intron | 40.0% | |
| TGACGTTAGCTGCATTAATC+AGG | - | chr4.4:10973569-10973588 | None:intergenic | 40.0% | |
| TGATACAAATCCTGGCAGTA+GGG | + | chr4.4:10973636-10973655 | MS.gene28050:CDS | 40.0% | |
| TGGTAATCTGTAACATCGTC+TGG | - | chr4.4:10973361-10973380 | None:intergenic | 40.0% | |
| TTATCCCATAGACGATTGCA+AGG | - | chr4.4:10974144-10974163 | None:intergenic | 40.0% | |
| TTGCATATCGGATGACAGTT+AGG | + | chr4.4:10973659-10973678 | MS.gene28050:CDS | 40.0% | |
| ! | AAGGTGTCATCTGGATAATC+AGG | + | chr4.4:10973720-10973739 | MS.gene28050:CDS | 40.0% |
| ! | ACAAGCTTGGTGAAGAAATC+TGG | - | chr4.4:10971907-10971926 | None:intergenic | 40.0% |
| ! | GGTTTGTTCCAGATTTGTGA+TGG | + | chr4.4:10971456-10971475 | MS.gene28050:intron | 40.0% |
| ! | TCAAGTGTCTAGAATGTGGT+GGG | + | chr4.4:10970697-10970716 | MS.gene28050:CDS | 40.0% |
| ! | TTCAAGTGTCTAGAATGTGG+TGG | + | chr4.4:10970696-10970715 | MS.gene28050:CDS | 40.0% |
| !! | GTAAGAACTTGTTTTCAGGC+CGG | + | chr4.4:10972894-10972913 | MS.gene28050:intron | 40.0% |
| !!! | CTATTTTGGGAGCTAGCTTT+TGG | + | chr4.4:10973918-10973937 | MS.gene28050:intron | 40.0% |
| !!! | GAGGCTTTGGAGTTTTGATT+AGG | + | chr4.4:10970516-10970535 | MS.gene28050:intron | 40.0% |
| !!! | GGAGTTTTGATTAGGTCTGT+CGG | + | chr4.4:10970524-10970543 | MS.gene28050:intron | 40.0% |
| AAAGTTCCTTGGAGAAGCTC+AGG | - | chr4.4:10970678-10970697 | None:intergenic | 45.0% | |
| ACATCTGGATACCCTTTGTC+TGG | + | chr4.4:10974443-10974462 | MS.gene28050:intron | 45.0% | |
| ACATTCTGATCTCTCTCCAG+GGG | - | chr4.4:10971240-10971259 | None:intergenic | 45.0% | |
| ACTGCTAAACGAACATGACG+AGG | - | chr4.4:10973839-10973858 | None:intergenic | 45.0% | |
| AGTGGTAACAAGGACAAGTG+AGG | + | chr4.4:10970647-10970666 | MS.gene28050:CDS | 45.0% | |
| AGTTCTGCTGTAGTGAACGT+TGG | - | chr4.4:10973436-10973455 | None:intergenic | 45.0% | |
| ATCCAGATGACACCTTGCAA+TGG | - | chr4.4:10973716-10973735 | None:intergenic | 45.0% | |
| ATTGTAGAACATGCTAGGGC+TGG | + | chr4.4:10971043-10971062 | MS.gene28050:CDS | 45.0% | |
| CAAGATATGGACGAAGAAGC+AGG | + | chr4.4:10974014-10974033 | MS.gene28050:CDS | 45.0% | |
| CAGCTCTATAGAACTAGCGT+AGG | + | chr4.4:10972352-10972371 | MS.gene28050:intron | 45.0% | |
| CCACAAACTGTCCAATTTGC+AGG | + | chr4.4:10971162-10971181 | MS.gene28050:intron | 45.0% | |
| CCCCACTCATTAGCATAAGA+AGG | - | chr4.4:10971981-10972000 | None:intergenic | 45.0% | |
| CCTGCAAATTGGACAGTTTG+TGG | - | chr4.4:10971165-10971184 | None:intergenic | 45.0% | |
| CGTAGAGCTGATACAAATCC+TGG | + | chr4.4:10973628-10973647 | MS.gene28050:CDS | 45.0% | |
| CTCCATAACAAACCTCTTGC+AGG | - | chr4.4:10970344-10970363 | None:intergenic | 45.0% | |
| CTGATACAAATCCTGGCAGT+AGG | + | chr4.4:10973635-10973654 | MS.gene28050:CDS | 45.0% | |
| CTGTAACAGGAGTGGTAACA+AGG | + | chr4.4:10970637-10970656 | MS.gene28050:CDS | 45.0% | |
| GAAAGTCATCATCTGCTGCT+GGG | + | chr4.4:10972218-10972237 | MS.gene28050:CDS | 45.0% | |
| GAAGCCAACGCCAATATATC+AGG | - | chr4.4:10971218-10971237 | None:intergenic | 45.0% | |
| GACATTCTGATCTCTCTCCA+GGG | - | chr4.4:10971241-10971260 | None:intergenic | 45.0% | |
| GAGAGAGATCAGAATGTCGT+AGG | + | chr4.4:10971243-10971262 | MS.gene28050:CDS | 45.0% | |
| GATTTAACAGGCTCAGGAAC+TGG | + | chr4.4:10971855-10971874 | MS.gene28050:intron | 45.0% | |
| GCTTAGTTCAGAATCCATGG+TGG | - | chr4.4:10972668-10972687 | None:intergenic | 45.0% | |
| GCTTGTATCTGTAACAGGAG+TGG | + | chr4.4:10970629-10970648 | MS.gene28050:CDS | 45.0% | |
| GGCAATAAAAGCAAGTCGGT+AGG | - | chr4.4:10971348-10971367 | None:intergenic | 45.0% | |
| GGTAGGCTTGTATCTGTAAC+AGG | + | chr4.4:10970624-10970643 | MS.gene28050:CDS | 45.0% | |
| GGTTGCAATTCATGAGGCTA+TGG | + | chr4.4:10973062-10973081 | MS.gene28050:intron | 45.0% | |
| TAAAAGCAAGTCGGTAGGAG+AGG | - | chr4.4:10971343-10971362 | None:intergenic | 45.0% | |
| TAATTACAGTTCCGTGGAGG+AGG | + | chr4.4:10974646-10974665 | MS.gene28050:CDS | 45.0% | |
| TGGCTACATCAGAGATTGGT+AGG | + | chr4.4:10970607-10970626 | MS.gene28050:CDS | 45.0% | |
| TTACTGGCATTTGAGGGTCA+TGG | + | chr4.4:10973006-10973025 | MS.gene28050:intron | 45.0% | |
| TTAGGGGGAAATAACAGGGA+TGG | - | chr4.4:10971701-10971720 | None:intergenic | 45.0% | |
| TTGCAGGCATTCTGCAAGTA+AGG | - | chr4.4:10970328-10970347 | None:intergenic | 45.0% | |
| ! | AACCTTGAAAGTATAGCCGG+TGG | - | chr4.4:10973310-10973329 | None:intergenic | 45.0% |
| ! | ATCTGGGAATGAAGGTGTGA+GGG | + | chr4.4:10971292-10971311 | MS.gene28050:CDS | 45.0% |
| ! | CAAGTGTCTAGAATGTGGTG+GGG | + | chr4.4:10970698-10970717 | MS.gene28050:CDS | 45.0% |
| ! | CTGCCGCTCTTTTGTATTAG+TGG | + | chr4.4:10972301-10972320 | MS.gene28050:intron | 45.0% |
| ! | CTGGTTGATTTAACAGGCTC+AGG | + | chr4.4:10971849-10971868 | MS.gene28050:intron | 45.0% |
| ! | CTGTCTAAGACGCATGACAA+GGG | - | chr4.4:10974279-10974298 | None:intergenic | 45.0% |
| ! | GCTTTGATGCTTGCTGACAA+TGG | + | chr4.4:10972918-10972937 | MS.gene28050:CDS | 45.0% |
| ! | GGAAGCTTTAATCAGGCTGT+CGG | + | chr4.4:10973687-10973706 | MS.gene28050:CDS | 45.0% |
| ! | GGCAGTTGGAAGCTTTAATC+AGG | + | chr4.4:10973680-10973699 | MS.gene28050:CDS | 45.0% |
| ! | TCTTTGGGGGTTAGATCCAT+CGG | - | chr4.4:10974210-10974229 | None:intergenic | 45.0% |
| ! | TGATCGTGATAGATGATGGC+AGG | + | chr4.4:10974816-10974835 | MS.gene28050:CDS | 45.0% |
| ! | TTCCACCGGCTATACTTTCA+AGG | + | chr4.4:10973305-10973324 | MS.gene28050:CDS | 45.0% |
| !! | ATGAAGGCATCAGCCTTAGA+GGG | + | chr4.4:10972016-10972035 | MS.gene28050:CDS | 45.0% |
| !! | GCTGGTTTGTGCGAATTGAA+TGG | + | chr4.4:10972131-10972150 | MS.gene28050:intron | 45.0% |
| !! | TGAGAGGTATTGCCTGAGTT+CGG | + | chr4.4:10972777-10972796 | MS.gene28050:intron | 45.0% |
| !! | TGCCTGCAAGAGGTTTGTTA+TGG | + | chr4.4:10970339-10970358 | MS.gene28050:CDS | 45.0% |
| !!! | TATGAATAATATAAAATTTT+TGG | + | chr4.4:10971647-10971666 | MS.gene28050:intron | 5.0% |
| AACGATGCTGATGGTCAAGC+TGG | + | chr4.4:10974059-10974078 | MS.gene28050:CDS | 50.0% | |
| ACGTCCAATGAGATACCTGC+TGG | + | chr4.4:10970980-10970999 | MS.gene28050:CDS | 50.0% | |
| ACTTGCAGAATGCCTGCAAG+AGG | + | chr4.4:10970329-10970348 | MS.gene28050:CDS | 50.0% | |
| AGAGCCAGCAGGTATCTCAT+TGG | - | chr4.4:10970987-10971006 | None:intergenic | 50.0% | |
| AGCTGGAAACTCTACTGCTC+AGG | + | chr4.4:10974076-10974095 | MS.gene28050:CDS | 50.0% | |
| AGCTGTCATGACCAACTGAC+TGG | + | chr4.4:10971606-10971625 | MS.gene28050:intron | 50.0% | |
| AGGGAAGCTTCTCAACGCAA+GGG | + | chr4.4:10971263-10971282 | MS.gene28050:CDS | 50.0% | |
| ATTGCAGGAAGTGGCTTAGC+TGG | + | chr4.4:10974569-10974588 | MS.gene28050:intron | 50.0% | |
| CGACATTCTGATCTCTCTCC+AGG | - | chr4.4:10971242-10971261 | None:intergenic | 50.0% | |
| CTGGCAGTAGGGTTGCATAT+CGG | + | chr4.4:10973647-10973666 | MS.gene28050:CDS | 50.0% | |
| CTTAGCTGGGATGAAGCAAC+GGG | + | chr4.4:10974583-10974602 | MS.gene28050:CDS | 50.0% | |
| CTTGCAGAAAAACCAGCCGA+TGG | + | chr4.4:10974191-10974210 | MS.gene28050:intron | 50.0% | |
| GAAGAAGCAGGTAGTGACGA+TGG | + | chr4.4:10974026-10974045 | MS.gene28050:CDS | 50.0% | |
| GAGGAGACCGTAATGCAAGA+AGG | + | chr4.4:10974302-10974321 | MS.gene28050:CDS | 50.0% | |
| GATTAGGTCTGTCGGTGTGA+GGG | + | chr4.4:10970532-10970551 | MS.gene28050:intron | 50.0% | |
| GCTTAGCTGGGATGAAGCAA+CGG | + | chr4.4:10974582-10974601 | MS.gene28050:CDS | 50.0% | |
| GGAAAGTCATCATCTGCTGC+TGG | + | chr4.4:10972217-10972236 | MS.gene28050:CDS | 50.0% | |
| GGTGCTTCATCTGGGAATGA+AGG | + | chr4.4:10971284-10971303 | MS.gene28050:CDS | 50.0% | |
| GTACAATGTGGCTCTTCCAC+CGG | + | chr4.4:10973291-10973310 | MS.gene28050:intron | 50.0% | |
| GTTGACTGCAACTGTTGCCA+AGG | + | chr4.4:10972240-10972259 | MS.gene28050:CDS | 50.0% | |
| GTTGCCAAGGAACCAGAAAC+TGG | + | chr4.4:10972253-10972272 | MS.gene28050:CDS | 50.0% | |
| TAGGGAAGCTTCTCAACGCA+AGG | + | chr4.4:10971262-10971281 | MS.gene28050:CDS | 50.0% | |
| TATCATACCGTCCTCCAGCA+GGG | - | chr4.4:10973167-10973186 | None:intergenic | 50.0% | |
| TCACTTGACTCCACTCTGCA+AGG | - | chr4.4:10973969-10973988 | None:intergenic | 50.0% | |
| TCGGATGACAGTTAGGCAGT+TGG | + | chr4.4:10973666-10973685 | MS.gene28050:CDS | 50.0% | |
| TGATTAGGTCTGTCGGTGTG+AGG | + | chr4.4:10970531-10970550 | MS.gene28050:intron | 50.0% | |
| TTATCATACCGTCCTCCAGC+AGG | - | chr4.4:10973168-10973187 | None:intergenic | 50.0% | |
| TTCAACTTTCGCCTCCTCCA+CGG | - | chr4.4:10974660-10974679 | None:intergenic | 50.0% | |
| TTGCAGGAAGTGGCTTAGCT+GGG | + | chr4.4:10974570-10974589 | MS.gene28050:intron | 50.0% | |
| TTGGCAAAGGGTCAGAATGC+AGG | + | chr4.4:10970955-10970974 | MS.gene28050:CDS | 50.0% | |
| ! | AGCTTTAATCAGGCTGTCGG+AGG | + | chr4.4:10973690-10973709 | MS.gene28050:CDS | 50.0% |
| ! | CATCTGGGAATGAAGGTGTG+AGG | + | chr4.4:10971291-10971310 | MS.gene28050:CDS | 50.0% |
| ! | GCTGTCTAAGACGCATGACA+AGG | - | chr4.4:10974280-10974299 | None:intergenic | 50.0% |
| ! | TCAAAGGTGCGCCAGACAAA+GGG | - | chr4.4:10974457-10974476 | None:intergenic | 50.0% |
| ! | TCTGGGAATGAAGGTGTGAG+GGG | + | chr4.4:10971293-10971312 | MS.gene28050:CDS | 50.0% |
| !! | AACGCAAGGGTGCTTCATCT+GGG | + | chr4.4:10971276-10971295 | MS.gene28050:CDS | 50.0% |
| !! | CATGAAGGCATCAGCCTTAG+AGG | + | chr4.4:10972015-10972034 | MS.gene28050:CDS | 50.0% |
| !! | CTCTCCAGTTTCTGGTTCCT+TGG | - | chr4.4:10972260-10972279 | None:intergenic | 50.0% |
| !! | TGAAGGCATCAGCCTTAGAG+GGG | + | chr4.4:10972017-10972036 | MS.gene28050:CDS | 50.0% |
| AAGACGCATGACAAGGGCCT+TGG | - | chr4.4:10974273-10974292 | None:intergenic | 55.0% | |
| CAAGCAGCATCAGAAGCTGC+TGG | + | chr4.4:10974839-10974858 | MS.gene28050:CDS | 55.0% | |
| CATGCGTCTTAGACAGCACG+AGG | + | chr4.4:10974283-10974302 | MS.gene28050:CDS | 55.0% | |
| CGATATGCAACCCTACTGCC+AGG | - | chr4.4:10973649-10973668 | None:intergenic | 55.0% | |
| CTCTGACTCCCAAAGCCCTA+AGG | - | chr4.4:10971319-10971338 | None:intergenic | 55.0% | |
| GGCATTTGAGGGTCATGGAC+TGG | + | chr4.4:10973011-10973030 | MS.gene28050:intron | 55.0% | |
| GTCAGCAAGCATCAAAGCGC+CGG | - | chr4.4:10972916-10972935 | None:intergenic | 55.0% | |
| GTTCGACCTGAGCTTCTCCA+AGG | + | chr4.4:10970669-10970688 | MS.gene28050:CDS | 55.0% | |
| TGGCTCTCTGCCTAGGTCAT+TGG | + | chr4.4:10971000-10971019 | MS.gene28050:CDS | 55.0% | |
| ! | ATGAAGGTGTGAGGGGCCTT+AGG | + | chr4.4:10971300-10971319 | MS.gene28050:CDS | 55.0% |
| ! | CTCAAAGGTGCGCCAGACAA+AGG | - | chr4.4:10974458-10974477 | None:intergenic | 55.0% |
| ! | GGCCATTGCAAGGTGTCATC+TGG | + | chr4.4:10973711-10973730 | MS.gene28050:CDS | 55.0% |
| ! | TGAAGGTGTGAGGGGCCTTA+GGG | + | chr4.4:10971301-10971320 | MS.gene28050:CDS | 55.0% |
| !! | ATATTGGCGTTGGCTTCCCC+TGG | + | chr4.4:10971221-10971240 | MS.gene28050:CDS | 55.0% |
| !! | CAACGCAAGGGTGCTTCATC+TGG | + | chr4.4:10971275-10971294 | MS.gene28050:CDS | 55.0% |
| ATACCGTCCTCCAGCAGGGT+TGG | - | chr4.4:10973163-10973182 | None:intergenic | 60.0% | |
| GTGAGGGGCCTTAGGGCTTT+GGG | + | chr4.4:10971308-10971327 | MS.gene28050:CDS | 60.0% | |
| TCTACTGCTCAGGAAGCCGC+TGG | + | chr4.4:10974086-10974105 | MS.gene28050:CDS | 60.0% | |
| TGGGGGTTAGATCCATCGGC+TGG | - | chr4.4:10974206-10974225 | None:intergenic | 60.0% | |
| TGTGAGGGGCCTTAGGGCTT+TGG | + | chr4.4:10971307-10971326 | MS.gene28050:CDS | 60.0% | |
| ! | AGGGTTGGCAGCGGCAAGAA+TGG | - | chr4.4:10973148-10973167 | None:intergenic | 60.0% |
| !! | TACCTGCTGGCTCTCTGCCT+AGG | + | chr4.4:10970993-10971012 | MS.gene28050:CDS | 60.0% |
| CTGCCAACCCTGCTGGAGGA+CGG | + | chr4.4:10973157-10973176 | MS.gene28050:CDS | 65.0% | |
| GACCTAGGCAGAGAGCCAGC+AGG | - | chr4.4:10970998-10971017 | None:intergenic | 65.0% | |
| GGCTGTCGGAGGCCATTGCA+AGG | + | chr4.4:10973701-10973720 | MS.gene28050:CDS | 65.0% | |
| ! | TCCTCCAGCAGGGTTGGCAG+CGG | - | chr4.4:10973157-10973176 | None:intergenic | 65.0% |
| CTTGCCGCTGCCAACCCTGC+TGG | + | chr4.4:10973150-10973169 | MS.gene28050:CDS | 70.0% | |
| GCCGCTGCCAACCCTGCTGG+AGG | + | chr4.4:10973153-10973172 | MS.gene28050:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10970117 | 10974934 | 10970117 | ID=MS.gene28050 |
| chr4.4 | mRNA | 10970117 | 10974934 | 10970117 | ID=MS.gene28050.t1;Parent=MS.gene28050 |
| chr4.4 | exon | 10970117 | 10970214 | 10970117 | ID=MS.gene28050.t1.exon1;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10970117 | 10970214 | 10970117 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10970318 | 10970443 | 10970318 | ID=MS.gene28050.t1.exon2;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10970318 | 10970443 | 10970318 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10970596 | 10970758 | 10970596 | ID=MS.gene28050.t1.exon3;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10970596 | 10970758 | 10970596 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10970878 | 10971071 | 10970878 | ID=MS.gene28050.t1.exon4;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10970878 | 10971071 | 10970878 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10971184 | 10971379 | 10971184 | ID=MS.gene28050.t1.exon5;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10971184 | 10971379 | 10971184 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10971468 | 10971542 | 10971468 | ID=MS.gene28050.t1.exon6;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10971468 | 10971542 | 10971468 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10971865 | 10972094 | 10971865 | ID=MS.gene28050.t1.exon7;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10971865 | 10972094 | 10971865 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10972177 | 10972291 | 10972177 | ID=MS.gene28050.t1.exon8;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10972177 | 10972291 | 10972177 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10972912 | 10972986 | 10972912 | ID=MS.gene28050.t1.exon9;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10972912 | 10972986 | 10972912 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10973063 | 10973203 | 10973063 | ID=MS.gene28050.t1.exon10;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10973063 | 10973203 | 10973063 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10973292 | 10973495 | 10973292 | ID=MS.gene28050.t1.exon11;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10973292 | 10973495 | 10973292 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10973580 | 10973741 | 10973580 | ID=MS.gene28050.t1.exon12;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10973580 | 10973741 | 10973580 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10973830 | 10973885 | 10973830 | ID=MS.gene28050.t1.exon13;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10973830 | 10973885 | 10973830 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10973974 | 10974116 | 10973974 | ID=MS.gene28050.t1.exon14;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10973974 | 10974116 | 10973974 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10974198 | 10974323 | 10974198 | ID=MS.gene28050.t1.exon15;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10974198 | 10974323 | 10974198 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10974576 | 10974706 | 10974576 | ID=MS.gene28050.t1.exon16;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10974576 | 10974706 | 10974576 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| chr4.4 | exon | 10974791 | 10974934 | 10974791 | ID=MS.gene28050.t1.exon17;Parent=MS.gene28050.t1 |
| chr4.4 | CDS | 10974791 | 10974934 | 10974791 | ID=cds.MS.gene28050.t1;Parent=MS.gene28050.t1 |
| Gene Sequence |
| Protein sequence |
