AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23323.t1 MTR_4g071090 98.333 840 12 1 1 838 1 840 0.0 1697
MS.gene23323.t1 MTR_8g090000 34.242 660 375 11 119 741 16 653 1.12e-115 371
MS.gene23323.t1 MTR_7g109480 39.726 584 313 13 228 800 144 699 7.11e-114 363
MS.gene23323.t1 MTR_2g437540 33.588 655 366 13 126 741 24 648 8.83e-111 358
MS.gene23323.t1 MTR_4g096700 33.739 658 357 13 141 746 17 647 1.87e-109 353
MS.gene23323.t1 MTR_4g116870 35.085 647 363 14 170 788 68 685 7.06e-106 343
MS.gene23323.t1 MTR_4g122270 34.370 611 347 10 152 737 238 819 3.64e-103 340
MS.gene23323.t1 MTR_7g100680 32.868 645 353 18 178 755 87 718 1.07e-90 304
MS.gene23323.t1 MTR_2g009190 31.188 606 364 15 168 746 41 620 7.42e-75 257
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23323.t1 AT2G16440 73.055 861 193 8 1 837 1 846 0.0 1240
MS.gene23323.t1 AT5G44635 34.483 696 390 15 94 755 2 665 3.32e-118 378
MS.gene23323.t1 AT5G44635 34.483 696 390 15 94 755 2 665 8.36e-118 378
MS.gene23323.t1 AT4G02060 37.713 586 324 12 227 800 141 697 1.25e-108 349
MS.gene23323.t1 AT4G02060 37.713 586 324 12 227 800 141 697 1.25e-108 349
MS.gene23323.t1 AT1G44900 34.049 652 355 16 121 737 210 821 4.68e-107 351
MS.gene23323.t1 AT1G44900 34.049 652 355 16 121 737 212 823 6.86e-107 350
MS.gene23323.t1 AT5G46280 31.776 642 373 9 149 746 19 639 1.74e-105 340
MS.gene23323.t1 AT2G07690 34.337 664 371 14 170 801 64 694 3.16e-105 341
MS.gene23323.t1 AT5G46280 31.776 642 373 9 149 746 19 639 1.43e-104 340
MS.gene23323.t1 AT2G07690 34.337 664 369 15 170 801 64 692 1.68e-103 336
MS.gene23323.t1 AT5G46280 32.045 621 357 9 149 725 19 618 1.72e-102 330
MS.gene23323.t1 AT5G46280 32.689 569 319 8 149 673 19 567 8.19e-95 308
MS.gene23323.t1 AT3G09660 32.640 625 352 19 216 784 131 742 4.72e-91 304
MS.gene23323.t1 AT3G09660 32.797 622 352 19 216 784 131 739 5.38e-91 305
MS.gene23323.t1 AT3G09660 32.640 625 352 19 216 784 131 742 1.65e-90 303
MS.gene23323.t1 AT2G14050 32.252 524 305 14 240 746 131 621 2.61e-69 242
MS.gene23323.t1 AT2G14050 32.252 524 305 14 240 746 131 621 4.15e-69 241

Find 230 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACTGTTTCTCCTGTTTC+AGG 0.145122 4.4:-37523937 None:intergenic
AATATAGCTTCCCTGATTTC+TGG 0.179319 4.4:-37522012 None:intergenic
TTCTCCTGTTTCAGGATCTT+TGG 0.208241 4.4:-37523929 None:intergenic
CGCTGGTCCGACTTACGTTT+GGG 0.221711 4.4:+37521452 MS.gene23323:CDS
TCATCAAATAAAACTTCTTC+TGG 0.231583 4.4:-37523443 None:intergenic
GGGACGTTCCATGCGGTTAT+TGG 0.232963 4.4:+37525649 MS.gene23323:CDS
TTGTGGGTGTATGTGCTTTC+GGG 0.277631 4.4:-37524997 None:intergenic
ATCATGGAGAAGATGCAAAT+TGG 0.278435 4.4:+37525626 MS.gene23323:CDS
CCGAATAATCATTCCCTTCA+TGG 0.292850 4.4:-37521974 None:intergenic
GGTGGAGGCATTTCGGCTTC+TGG 0.293566 4.4:+37525394 MS.gene23323:CDS
GTCAGCCTTTCATAGATATC+TGG 0.298464 4.4:-37523580 None:intergenic
TATTGTTTCCCTGCACTATA+AGG 0.304910 4.4:+37524815 MS.gene23323:CDS
ATGAGGAATTTGAATCCTTC+TGG 0.314341 4.4:+37521828 MS.gene23323:CDS
GACGGCGGCGACGGCGGCCG+GGG 0.319854 4.4:-37521236 None:intergenic
AGTCACTGGCGCCAAACATC+TGG 0.319935 4.4:+37523605 MS.gene23323:CDS
TGATGATTTGGATATGGATT+TGG 0.321742 4.4:+37521563 MS.gene23323:CDS
TTGACGGCGGCGACGGCGGC+CGG 0.323649 4.4:-37521238 None:intergenic
AACAAGTGTCATCGAATTCT+TGG 0.324058 4.4:-37522221 None:intergenic
TTCCCTGATTTCTGGTATAA+TGG 0.327037 4.4:-37522004 None:intergenic
TTACCTCTCTCCACCGGAAC+CGG 0.337220 4.4:-37522066 None:intergenic
GATCAAACAGGTTATTGAAT+TGG 0.344653 4.4:+37521611 MS.gene23323:CDS
AAGGATGAGGCGAGAAAGTT+TGG 0.347925 4.4:+37525583 MS.gene23323:CDS
TGACGGCGGCGACGGCGGCC+GGG 0.349028 4.4:-37521237 None:intergenic
TGGTGATGATGATTTGGATA+TGG 0.355491 4.4:+37521557 MS.gene23323:CDS
ACGCTGGTCCGACTTACGTT+TGG 0.358693 4.4:+37521451 MS.gene23323:CDS
TAAACAAATTGTGAGGCTTC+AGG 0.364258 4.4:+37522971 MS.gene23323:CDS
GCTCCATTATACCAGAAATC+AGG 0.366675 4.4:+37522001 MS.gene23323:CDS
ATTCTCCTTGTTGGTGATCC+TGG 0.367312 4.4:+37523802 MS.gene23323:CDS
CTTCTTCTGGATTTCTGCCC+TGG 0.368125 4.4:-37523430 None:intergenic
GTCGTAACCGTCGCCGCCTT+CGG 0.370559 4.4:-37521421 None:intergenic
TCTGTTCGGTTGAGGTGTTC+CGG 0.372748 4.4:-37521274 None:intergenic
ATTCTGCTCTGACCCGGTTC+CGG 0.375919 4.4:+37522053 MS.gene23323:CDS
GTGTGAGGCGTTCCTCCTTC+AGG 0.376780 4.4:-37523011 None:intergenic
TCATGGAGAAGATGCAAATT+GGG 0.382324 4.4:+37525627 MS.gene23323:CDS
TCAAGGTGGTGATGATGATT+TGG 0.385708 4.4:+37521551 MS.gene23323:CDS
ATGATGTGGTGGAGGCATTT+CGG 0.391101 4.4:+37525387 MS.gene23323:CDS
GAGGTGGAAGTTGGTGTGGC+AGG 0.396719 4.4:-37521378 None:intergenic
TGTGGCAGGGACACGGCGGC+TGG 0.398291 4.4:-37521364 None:intergenic
GTTTGGATAACTACCAGTTC+TGG 0.398922 4.4:-37525447 None:intergenic
CATGACAAACTGGTGGATAC+TGG 0.399287 4.4:+37523050 MS.gene23323:CDS
AATTTACTTAATGCTTGATA+AGG 0.399930 4.4:+37524758 MS.gene23323:CDS
GTTGTGGGTGTATGTGCTTT+CGG 0.401989 4.4:-37524998 None:intergenic
CTTGCTATTGCATGACAAAC+TGG 0.407456 4.4:+37523040 MS.gene23323:CDS
GCTGCTGATGAATTGATTAC+AGG 0.407975 4.4:+37525032 MS.gene23323:CDS
TCTCATAACTACTGGTGTTT+CGG 0.408833 4.4:+37525553 MS.gene23323:CDS
ATCAGGTGACTGGTATATAC+AGG 0.409169 4.4:+37523174 MS.gene23323:intron
GTTGGCAATTGGACTTGAAT+TGG 0.411791 4.4:-37521202 None:intergenic
ATTCTCCGGAAGTAGCAAAA+AGG 0.412222 4.4:+37525082 MS.gene23323:CDS
ACGGCGGCGACGGCGGCCGG+GGG 0.414613 4.4:-37521235 None:intergenic
GTGCAGGGAAACAATATGTT+TGG 0.417678 4.4:-37524808 None:intergenic
TATACAGGGCTATGAGTGTC+AGG 0.419389 4.4:+37523189 MS.gene23323:CDS
CCATGAAGGGAATGATTATT+CGG 0.419432 4.4:+37521974 MS.gene23323:CDS
GAGGAGTAGGTGTTGGCAAT+TGG 0.421375 4.4:-37521213 None:intergenic
AATGCTTTGAAGTTGGCATC+TGG 0.429342 4.4:+37523754 MS.gene23323:CDS
TCCCGTCACCGCCGTGGTGG+CGG 0.429729 4.4:+37521333 MS.gene23323:CDS
TCATCTAGCTCCCAGATGTT+TGG 0.433147 4.4:-37523616 None:intergenic
TGCCGCCACCACGGCGGTGA+CGG 0.435855 4.4:-37521335 None:intergenic
GAAGGATTTGTTTCCATGGC+TGG 0.441340 4.4:+37525939 MS.gene23323:CDS
TAGCATCCTCAACCAGCATC+CGG 0.442650 4.4:-37523391 None:intergenic
CACCGAAGTCCTTGCATTGA+GGG 0.444534 4.4:-37524346 None:intergenic
CCTCATAATCCTTATAGTGC+AGG 0.451180 4.4:-37524824 None:intergenic
CAGCTTCATCTGATAGTTGT+GGG 0.452578 4.4:-37525013 None:intergenic
GACATCAAAGTCCCGGATGC+TGG 0.459233 4.4:+37523379 MS.gene23323:CDS
TACCTCGGTCGCTCAAAACT+AGG 0.463388 4.4:-37524053 None:intergenic
GCAGGGACACGGCGGCTGGA+AGG 0.466484 4.4:-37521360 None:intergenic
AAATCAGGGAAGCTATATTC+AGG 0.467213 4.4:+37522016 MS.gene23323:CDS
CAGGGACACGGCGGCTGGAA+GGG 0.467568 4.4:-37521359 None:intergenic
GCATCTGGCGCTAGCTTTCG+TGG 0.468482 4.4:+37523769 MS.gene23323:CDS
GGAATCCATTGGAGTGGAAT+CGG 0.468602 4.4:-37521059 None:intergenic
GAAGTGATACGAACCATTGT+TGG 0.469083 4.4:-37521080 None:intergenic
TTAAGATGAATTTCGCTGCC+AGG 0.469150 4.4:-37525786 None:intergenic
CAGCGAAGGATTTGTTTCCA+TGG 0.470604 4.4:+37525935 MS.gene23323:CDS
TGATTGATTGACGGCGGCGA+CGG 0.471280 4.4:-37521245 None:intergenic
GCCGCCACCACGGCGGTGAC+GGG 0.471860 4.4:-37521334 None:intergenic
TTGAAAAGCATGTTCAAACT+AGG 0.472903 4.4:+37521778 MS.gene23323:CDS
GATATAAATATTCTCCTTGT+TGG 0.474086 4.4:+37523793 MS.gene23323:CDS
TCGGATTCGCTTCTCAGAAT+CGG 0.474303 4.4:+37525275 MS.gene23323:CDS
CCTCCTTCAGGTATCTCGTC+AGG 0.476130 4.4:-37522999 None:intergenic
GTGGCCAAAGATCCTGAAAC+AGG 0.477237 4.4:+37523925 MS.gene23323:CDS
GGATTATATCGTGAACCGCT+AGG 0.481496 4.4:-37524384 None:intergenic
CCTGCACTATAAGGATTATG+AGG 0.483526 4.4:+37524824 MS.gene23323:CDS
TTCGGTTGAGGTGTTCCGGA+TGG 0.484095 4.4:-37521270 None:intergenic
CAATGCAAGGACTTCGGTGT+TGG 0.484227 4.4:+37524350 MS.gene23323:CDS
TGAACCTACTGTTTGCTTGA+GGG 0.484828 4.4:+37522186 MS.gene23323:CDS
AAAGAAAGGTCTTCTTTGCC+AGG 0.485292 4.4:+37523642 MS.gene23323:CDS
TTGGAATTGTCCGGTGAAGA+AGG 0.487245 4.4:-37521183 None:intergenic
GGCATTTACACCAGTGGAAG+GGG 0.488022 4.4:+37523874 MS.gene23323:CDS
GATTATATCGTGAACCGCTA+GGG 0.498770 4.4:-37524383 None:intergenic
GTATGAGAAATTGATCAAAC+AGG 0.500686 4.4:+37521599 MS.gene23323:CDS
GATATGGATTTGGATATTGA+AGG 0.501917 4.4:+37521573 MS.gene23323:CDS
GACATGGATCTCATAACTAC+TGG 0.502893 4.4:+37525545 MS.gene23323:CDS
AAGTTGGTGTGGCAGGGACA+CGG 0.505458 4.4:-37521371 None:intergenic
GGACTTGAATTGGAATTGTC+CGG 0.506755 4.4:-37521192 None:intergenic
GAACCATTGTTGGAATCCAT+TGG 0.507852 4.4:-37521070 None:intergenic
GAAGCGAAGCGAGATCTGTT+CGG 0.512176 4.4:-37521288 None:intergenic
AATAGACTCTCAATCTGCCT+TGG 0.512928 4.4:-37525231 None:intergenic
GACTTAACAGTTCTCTGAGT+TGG 0.513256 4.4:-37523218 None:intergenic
GGCTTCCGATTCCACTCCAA+TGG 0.513615 4.4:+37521054 MS.gene23323:CDS
GCCACCACGGCGGTGACGGG+AGG 0.514779 4.4:-37521331 None:intergenic
TGAGAGGATGGTATCCATGA+AGG 0.515734 4.4:+37521960 MS.gene23323:CDS
CGGCGGTGACGGGAGGGAGT+TGG 0.516071 4.4:-37521324 None:intergenic
AGACACTCGCAACATGATCA+TGG 0.516681 4.4:+37525610 MS.gene23323:CDS
GTTGTCAATGACAGACAAGC+GGG 0.516945 4.4:-37524406 None:intergenic
AGGTGGAAGTTGGTGTGGCA+GGG 0.517814 4.4:-37521377 None:intergenic
ACGTTCCATGCGGTTATTGG+AGG 0.517993 4.4:+37525652 MS.gene23323:CDS
GGGAGTTGGAGTGGCATCAG+AGG 0.518215 4.4:-37521310 None:intergenic
CTGGTGGATACTGGAAAGCC+AGG 0.518819 4.4:+37523059 MS.gene23323:CDS
TTCCCTCAATGCAAGGACTT+CGG 0.519427 4.4:+37524344 MS.gene23323:CDS
AAGCGAGATCTGTTCGGTTG+AGG 0.519567 4.4:-37521282 None:intergenic
AATTAATTAACAGGTAATAA+CGG 0.521998 4.4:+37525203 MS.gene23323:intron
CTGGTCCGACTTACGTTTGG+GGG 0.523857 4.4:+37521454 MS.gene23323:CDS
TAAGATGGTGAGGTATCCTC+TGG 0.524702 4.4:+37521695 MS.gene23323:CDS
CATGGAAACAAATCCTTCGC+TGG 0.526272 4.4:-37525934 None:intergenic
TATGGAGGTTGACAATGGCC+AGG 0.526806 4.4:+37523412 MS.gene23323:CDS
ATTACGACTTAGTGAAGCAT+TGG 0.527011 4.4:+37525251 MS.gene23323:CDS
TTTGTTGTATATCAGGTGAC+TGG 0.529577 4.4:+37523164 MS.gene23323:intron
CATAGGAAAGTCCTCGGAGG+TGG 0.530567 4.4:-37521394 None:intergenic
AGCTGCGACTTGCTTGTACC+AGG 0.531962 4.4:-37523820 None:intergenic
CGGATGGAGTGATTGATTGA+CGG 0.532588 4.4:-37521254 None:intergenic
TTTCGGCAAGCGAAAGGATG+AGG 0.535401 4.4:+37525570 MS.gene23323:CDS
CGTCAATCAATCACTCCATC+CGG 0.536330 4.4:+37521255 MS.gene23323:CDS
GAACATGGAGCAGGATGTGT+TGG 0.537785 4.4:+37524941 MS.gene23323:intron
TACCTCTCTCCACCGGAACC+GGG 0.539167 4.4:-37522065 None:intergenic
TAAGATGAATTTCGCTGCCA+GGG 0.539727 4.4:-37525785 None:intergenic
AGCCACAGACTTACTTGCAT+CGG 0.543317 4.4:-37522249 None:intergenic
CTGCTCTGACCCGGTTCCGG+TGG 0.545661 4.4:+37522056 MS.gene23323:CDS
GCAGCTTCATCTGATAGTTG+TGG 0.546328 4.4:-37525014 None:intergenic
TCTGCAATGGATACCAGAAC+TGG 0.546883 4.4:+37525434 MS.gene23323:CDS
TCACGAATTGTATAGTAAGA+TGG 0.547022 4.4:+37521680 MS.gene23323:CDS
CTCCATTATACCAGAAATCA+GGG 0.547487 4.4:+37522002 MS.gene23323:CDS
CTGAACCTACTGTTTGCTTG+AGG 0.548909 4.4:+37522185 MS.gene23323:CDS
CTCACCTCAACTCTGTCACC+TGG 0.549979 4.4:-37523077 None:intergenic
ATATTCAGGTGTCTAGTATG+TGG 0.553917 4.4:+37522030 MS.gene23323:CDS
AGGGGTAGGGGAAAATTCTC+CGG 0.554199 4.4:+37525068 MS.gene23323:CDS
TGGAGTGGAATCGGAAGCCA+TGG 0.554448 4.4:-37521050 None:intergenic
CTCATAATCCTTATAGTGCA+GGG 0.554579 4.4:-37524823 None:intergenic
AGCATCCTCAACCAGCATCC+GGG 0.555444 4.4:-37523390 None:intergenic
AAACAGGTTATTGAATTGGA+AGG 0.555576 4.4:+37521615 MS.gene23323:CDS
GTCACTGGCGCCAAACATCT+GGG 0.560062 4.4:+37523606 MS.gene23323:CDS
GAGCTAGATGATGTAAAGAA+AGG 0.560591 4.4:+37523628 MS.gene23323:CDS
GTGACGGGAGGGAGTTGGAG+TGG 0.564090 4.4:-37521319 None:intergenic
GATGCTGGTTGAGGATGCTA+TGG 0.564286 4.4:+37523394 MS.gene23323:CDS
GACTTTCCTATGTCTTCCGA+AGG 0.564548 4.4:+37521405 MS.gene23323:CDS
AATCTTCAGGTTCTTGAGAG+TGG 0.565854 4.4:+37524027 MS.gene23323:intron
ATGTGGATTCTGCTCTGACC+CGG 0.565866 4.4:+37522047 MS.gene23323:CDS
ACACCGAAGTCCTTGCATTG+AGG 0.566072 4.4:-37524347 None:intergenic
ATGTCTTCCGAAGGCGGCGA+CGG 0.566788 4.4:+37521414 MS.gene23323:CDS
ATGTTTGGCAAGTCGTCGGT+CGG 0.570550 4.4:-37524793 None:intergenic
AAGTCCTCGGAGGTGGAAGT+TGG 0.570681 4.4:-37521387 None:intergenic
GCCAACACCTACTCCTCCCC+CGG 0.570982 4.4:+37521219 MS.gene23323:CDS
TGGAAGGGATGCCGCCACCA+CGG 0.571805 4.4:-37521344 None:intergenic
GACTTAGTGAAGCATTGGCT+CGG 0.572654 4.4:+37525256 MS.gene23323:CDS
CTTCACAGGAACTATTGACA+TGG 0.572711 4.4:+37525529 MS.gene23323:intron
GAGAGGATGGTATCCATGAA+GGG 0.572804 4.4:+37521961 MS.gene23323:CDS
AAAGTCCCGGATGCTGGTTG+AGG 0.573038 4.4:+37523385 MS.gene23323:CDS
TTGATTGACGGCGGCGACGG+CGG 0.576601 4.4:-37521242 None:intergenic
ATAATTGCAGAACATGGAGC+AGG 0.578019 4.4:+37524932 MS.gene23323:intron
ACCTCGGTCGCTCAAAACTA+GGG 0.578032 4.4:-37524052 None:intergenic
ACTCCAATGGATTCCAACAA+TGG 0.580647 4.4:+37521067 MS.gene23323:CDS
CTGGTGTTTCGGCAAGCGAA+AGG 0.580745 4.4:+37525564 MS.gene23323:CDS
TGCAATGCAGCAATCTGCAA+TGG 0.581576 4.4:+37525421 MS.gene23323:CDS
ACAAACTGTTTCAATAGCAA+AGG 0.582486 4.4:+37524308 MS.gene23323:CDS
ACAAAATGTCTGACAATGCA+AGG 0.583185 4.4:+37524097 MS.gene23323:CDS
CAATATGTTTGGCAAGTCGT+CGG 0.583594 4.4:-37524797 None:intergenic
ATATGGATTTGGATATTGAA+GGG 0.585173 4.4:+37521574 MS.gene23323:CDS
CTCGGAGGTGGAAGTTGGTG+TGG 0.585837 4.4:-37521382 None:intergenic
AGGTAATAACGGCAACTCCA+AGG 0.585966 4.4:+37525214 MS.gene23323:intron
GTTGCTACTCTCGCCAGCGA+AGG 0.586679 4.4:+37525921 MS.gene23323:CDS
TGAAAGGCTGACAAAGTCAC+TGG 0.588015 4.4:+37523591 MS.gene23323:CDS
CCCTCCCGTCACCGCCGTGG+TGG 0.589100 4.4:+37521330 MS.gene23323:CDS
ATGTGAATGATGCGATTCAG+AGG 0.592525 4.4:+37521496 MS.gene23323:CDS
GACCCGGTTCCGGTGGAGAG+AGG 0.592602 4.4:+37522063 MS.gene23323:CDS
TGGCATTTACACCAGTGGAA+GGG 0.592837 4.4:+37523873 MS.gene23323:CDS
ACTGTTTCAATAGCAAAGGC+AGG 0.593633 4.4:+37524312 MS.gene23323:CDS
GCTGGTCCGACTTACGTTTG+GGG 0.594202 4.4:+37521453 MS.gene23323:CDS
ATTGTTGGAATCCATTGGAG+TGG 0.594571 4.4:-37521065 None:intergenic
AACAACCAGATATCTATGAA+AGG 0.595448 4.4:+37523575 MS.gene23323:CDS
TCGCCGCCTTCGGAAGACAT+AGG 0.595608 4.4:-37521411 None:intergenic
GGTTGGATTGACTGCTTACG+TGG 0.597160 4.4:+37523906 MS.gene23323:CDS
CCACGTGGCATTTACACCAG+TGG 0.599464 4.4:+37523868 MS.gene23323:CDS
CATGGAGAAGATGCAAATTG+GGG 0.599489 4.4:+37525628 MS.gene23323:CDS
TTATTGCTTCCCTCAATGCA+AGG 0.600052 4.4:+37524337 MS.gene23323:CDS
AGGCGGCGACGGTTACGACA+TGG 0.600969 4.4:+37521425 MS.gene23323:CDS
GTCTCAGGTGGCTAAACTGA+AGG 0.601377 4.4:+37523543 MS.gene23323:intron
TGGACAAAAGAGTGGGAGGA+AGG 0.601830 4.4:-37524434 None:intergenic
GAACTAAAGAATCAGAGCCC+TGG 0.602624 4.4:+37525768 MS.gene23323:CDS
GCTGGTTGAGGATGCTATGG+AGG 0.604167 4.4:+37523397 MS.gene23323:CDS
GTGGCATTTACACCAGTGGA+AGG 0.610034 4.4:+37523872 MS.gene23323:CDS
TTACTGATAAACAAATTGTG+AGG 0.611797 4.4:+37522964 MS.gene23323:CDS
ATGGAGGTTGACAATGGCCA+GGG 0.614550 4.4:+37523413 MS.gene23323:CDS
ACTCCCTCCCGTCACCGCCG+TGG 0.615649 4.4:+37521327 MS.gene23323:CDS
CCACCACGGCGGTGACGGGA+GGG 0.621741 4.4:-37521330 None:intergenic
GGGGACTAACATTAGTGTGG+AGG 0.622648 4.4:+37521473 MS.gene23323:CDS
TTTCCTATGTCTTCCGAAGG+CGG 0.623869 4.4:+37521408 MS.gene23323:CDS
GGAAGACATAGGAAAGTCCT+CGG 0.623985 4.4:-37521400 None:intergenic
CATCAATGCAGCAGATACCT+CGG 0.625698 4.4:-37524068 None:intergenic
AACTAACCTGGACAAAAGAG+TGG 0.626323 4.4:-37524442 None:intergenic
GTGTAATTACCTCTCTCCAC+CGG 0.632724 4.4:-37522072 None:intergenic
AAAGCCAGGTGACAGAGTTG+AGG 0.641668 4.4:+37523073 MS.gene23323:CDS
TCTTCCCTCAAGCAAACAGT+AGG 0.642149 4.4:-37522190 None:intergenic
TCAGGTGACTGGTATATACA+GGG 0.649445 4.4:+37523175 MS.gene23323:intron
AACCTGGACAAAAGAGTGGG+AGG 0.651252 4.4:-37524438 None:intergenic
TAATACCTCCAATAACCGCA+TGG 0.653841 4.4:-37525657 None:intergenic
AAAATGGCAAGCACCTCCAG+AGG 0.658144 4.4:-37521711 None:intergenic
TTGGCTTGCGCAAACCCTAG+CGG 0.658205 4.4:+37524369 MS.gene23323:CDS
GATGGTGAGGTATCCTCTGG+AGG 0.660588 4.4:+37521698 MS.gene23323:CDS
ACTAACCTGGACAAAAGAGT+GGG 0.661844 4.4:-37524441 None:intergenic
ACACCTGACGAGATACCTGA+AGG 0.663788 4.4:+37522996 MS.gene23323:CDS
TTAAGAGCTCAACTTCAATG+AGG 0.667900 4.4:+37521811 MS.gene23323:CDS
AATAGCAAGCTAACAGTGTG+AGG 0.667908 4.4:-37523026 None:intergenic
GCTATTGCATGACAAACTGG+TGG 0.668028 4.4:+37523043 MS.gene23323:CDS
TGTTGTCAATGACAGACAAG+CGG 0.675119 4.4:-37524407 None:intergenic
AATTGTATAGTAAGATGGTG+AGG 0.675670 4.4:+37521685 MS.gene23323:CDS
CACACCAACTTCCACCTCCG+AGG 0.676430 4.4:+37521383 MS.gene23323:CDS
ATACAGGGCTATGAGTGTCA+GGG 0.676940 4.4:+37523190 MS.gene23323:CDS
TTGTACCAGGATCACCAACA+AGG 0.678899 4.4:-37523807 None:intergenic
GCATTTACACCAGTGGAAGG+GGG 0.685959 4.4:+37523875 MS.gene23323:CDS
AGGGCTATGAGTGTCAGGGT+AGG 0.695713 4.4:+37523194 MS.gene23323:CDS
ATGGAGTGATTGATTGACGG+CGG 0.697982 4.4:-37521251 None:intergenic
GGTTACGACATGGATGACGC+TGG 0.706192 4.4:+37521435 MS.gene23323:CDS
GATGCTATGGAGGTTGACAA+TGG 0.706325 4.4:+37523407 MS.gene23323:CDS
TTGTCAATGACAGACAAGCG+GGG 0.713062 4.4:-37524405 None:intergenic
CCTGACGAGATACCTGAAGG+AGG 0.715290 4.4:+37522999 MS.gene23323:CDS
ATGGAGAAGATGCAAATTGG+GGG 0.717552 4.4:+37525629 MS.gene23323:CDS
TGCAAGGAGCATGTTACACG+AGG 0.719897 4.4:+37524113 MS.gene23323:CDS
AAGGGATGCCGCCACCACGG+CGG 0.726179 4.4:-37521341 None:intergenic
CCACTGGTGTAAATGCCACG+TGG 0.732070 4.4:-37523868 None:intergenic
TTGGTGTGGCAGGGACACGG+CGG 0.750786 4.4:-37521368 None:intergenic
AGACATAGGAAAGTCCTCGG+AGG 0.767289 4.4:-37521397 None:intergenic
ATACACAAACTTTCTCCACG+TGG 0.768452 4.4:+37523853 MS.gene23323:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTCTCTTTAAAAATAAA+TGG + chr4.4:37524666-37524685 MS.gene23323:intron 10.0%
!!! GTGATTATTTTAAATTATAT+TGG - chr4.4:37525735-37525754 None:intergenic 10.0%
!! AATTAATTAACAGGTAATAA+CGG + chr4.4:37525203-37525222 MS.gene23323:intron 15.0%
!! TTAGTCATATATAGTTTATT+TGG - chr4.4:37525499-37525518 None:intergenic 15.0%
!!! TCCAATAATTTTTTTTTGTT+TGG + chr4.4:37522611-37522630 MS.gene23323:intron 15.0%
!! AAAAATAATCTCAAAGGTAA+GGG - chr4.4:37525821-37525840 None:intergenic 20.0%
!! AATAATCAATTTGATCTAGA+AGG + chr4.4:37522708-37522727 MS.gene23323:intron 20.0%
!! AATAATCATTTGAATTGTAC+TGG + chr4.4:37522783-37522802 MS.gene23323:intron 20.0%
!! AATTTACTTAATGCTTGATA+AGG + chr4.4:37524758-37524777 MS.gene23323:CDS 20.0%
!! ATAATCATTTGAATTGTACT+GGG + chr4.4:37522784-37522803 MS.gene23323:intron 20.0%
!! CTATCTATCAATTAATTAAC+AGG + chr4.4:37525194-37525213 MS.gene23323:intron 20.0%
!! CTGTTAATTAATTGATAGAT+AGG - chr4.4:37525196-37525215 None:intergenic 20.0%
!! GCCAAACAAAAAAAAATTAT+TGG - chr4.4:37522615-37522634 None:intergenic 20.0%
!! TAAAAATAATCTCAAAGGTA+AGG - chr4.4:37525822-37525841 None:intergenic 20.0%
!!! ACTAAATGTTTTAGAAAGAA+TGG - chr4.4:37525683-37525702 None:intergenic 20.0%
!!! AGTTTTATTTGATGAAGAAA+AGG + chr4.4:37523451-37523470 MS.gene23323:CDS 20.0%
!!! CTATTTTTTTTCTACAAATC+AGG - chr4.4:37525325-37525344 None:intergenic 20.0%
!!! TTTTTTCTAAAAACTTTGCA+TGG + chr4.4:37524184-37524203 MS.gene23323:intron 20.0%
! AACATATCTTCTCTAATTTC+AGG + chr4.4:37522940-37522959 MS.gene23323:intron 25.0%
! ACTGGTAAAAATAATCTCAA+AGG - chr4.4:37525827-37525846 None:intergenic 25.0%
! ATATACAACAAAACACTCAT+GGG - chr4.4:37523156-37523175 None:intergenic 25.0%
! ATATGGATTTGGATATTGAA+GGG + chr4.4:37521574-37521593 MS.gene23323:CDS 25.0%
! ATATGTTAATTGCAGTTTCA+AGG - chr4.4:37522927-37522946 None:intergenic 25.0%
! ATGAAAACCCTAAAAAATAG+AGG - chr4.4:37524567-37524586 None:intergenic 25.0%
! CATCAAAACCATATCAAAAA+TGG - chr4.4:37521730-37521749 None:intergenic 25.0%
! GAATGATATTTGATGTTGAA+GGG + chr4.4:37522326-37522345 MS.gene23323:intron 25.0%
! GATATAAATATTCTCCTTGT+TGG + chr4.4:37523793-37523812 MS.gene23323:CDS 25.0%
! GTCATATATAGTTTATTTGG+AGG - chr4.4:37525496-37525515 None:intergenic 25.0%
! TAAAATAATCACGCAGATAT+TGG + chr4.4:37525743-37525762 MS.gene23323:intron 25.0%
! TAAGTCATTGTTCAAAGTAT+GGG + chr4.4:37523235-37523254 MS.gene23323:intron 25.0%
! TAGAAATCTGAATAAGAAGA+TGG - chr4.4:37521115-37521134 None:intergenic 25.0%
! TATATTTGACAATTCCAGTA+TGG + chr4.4:37522645-37522664 MS.gene23323:intron 25.0%
! TCATCAAATAAAACTTCTTC+TGG - chr4.4:37523446-37523465 None:intergenic 25.0%
! TGAATGATATTTGATGTTGA+AGG + chr4.4:37522325-37522344 MS.gene23323:intron 25.0%
! TTAAGTCATTGTTCAAAGTA+TGG + chr4.4:37523234-37523253 MS.gene23323:intron 25.0%
! TTACTGATAAACAAATTGTG+AGG + chr4.4:37522964-37522983 MS.gene23323:CDS 25.0%
! TTATATGTGATGATAGTTTG+TGG + chr4.4:37521920-37521939 MS.gene23323:intron 25.0%
! TTTAGAAAAAACAAGCAGAT+AGG - chr4.4:37524175-37524194 None:intergenic 25.0%
!! GTAAAAAATTACCCGATTTT+AGG - chr4.4:37522688-37522707 None:intergenic 25.0%
!! TTATTTTCTTGCAGCTTTTT+GGG + chr4.4:37523728-37523747 MS.gene23323:intron 25.0%
!!! AAGCTTCTTTTAGCTTTTTT+CGG + chr4.4:37522364-37522383 MS.gene23323:intron 25.0%
!!! ATTTTGAAACCCTATTTTTC+AGG + chr4.4:37521159-37521178 MS.gene23323:intron 25.0%
!!! CTATTTTTTAGGGTTTTCAT+TGG + chr4.4:37524567-37524586 MS.gene23323:intron 25.0%
!!! TAGTTCTATATTTTGACTGT+TGG + chr4.4:37522284-37522303 MS.gene23323:intron 25.0%
!!! TTTATTTTCTTGCAGCTTTT+TGG + chr4.4:37523727-37523746 MS.gene23323:intron 25.0%
!!! TTTGTTTTGAAGATATTGAG+AGG + chr4.4:37521944-37521963 MS.gene23323:intron 25.0%
AAAAACTACTATTAACCTGC+TGG + chr4.4:37522569-37522588 MS.gene23323:intron 30.0%
AAAATAGAAGCTAATGACCA+TGG - chr4.4:37522838-37522857 None:intergenic 30.0%
AAACAGGTTATTGAATTGGA+AGG + chr4.4:37521615-37521634 MS.gene23323:CDS 30.0%
AAATGCAAATGAGTTTGAGA+AGG - chr4.4:37523264-37523283 None:intergenic 30.0%
AACAACCAGATATCTATGAA+AGG + chr4.4:37523575-37523594 MS.gene23323:CDS 30.0%
AATAATGTCTGCCTAAAATC+GGG + chr4.4:37522674-37522693 MS.gene23323:intron 30.0%
AATTGTATAGTAAGATGGTG+AGG + chr4.4:37521685-37521704 MS.gene23323:CDS 30.0%
ACAAACTGTTTCAATAGCAA+AGG + chr4.4:37524308-37524327 MS.gene23323:CDS 30.0%
ACAGTGTAAAAAGAACATGA+AGG + chr4.4:37525964-37525983 MS.gene23323:CDS 30.0%
ACATAGCATACATAACGTAA+GGG - chr4.4:37522394-37522413 None:intergenic 30.0%
ACATTATTGAATCACCATAC+TGG - chr4.4:37522662-37522681 None:intergenic 30.0%
AGGAATACAATAGAGTATAG+GGG - chr4.4:37525476-37525495 None:intergenic 30.0%
ATAAACAGAGACAAGTGTAT+TGG - chr4.4:37524272-37524291 None:intergenic 30.0%
ATAGTTCCTGTGAAGATAAA+AGG - chr4.4:37525524-37525543 None:intergenic 30.0%
CAATAATGTCTGCCTAAAAT+CGG + chr4.4:37522673-37522692 MS.gene23323:intron 30.0%
CATTAGACACTAAAAGATCA+TGG - chr4.4:37523971-37523990 None:intergenic 30.0%
CATTAGTTCACTTATCCTTA+GGG - chr4.4:37525867-37525886 None:intergenic 30.0%
CTAATGTACAAGAAATGCAA+TGG + chr4.4:37523985-37524004 MS.gene23323:intron 30.0%
CTATGTAAAAATAAGGGGTA+GGG + chr4.4:37525055-37525074 MS.gene23323:CDS 30.0%
CTATTTATCAGAGTATGTCA+TGG - chr4.4:37523109-37523128 None:intergenic 30.0%
GAGGAATACAATAGAGTATA+GGG - chr4.4:37525477-37525496 None:intergenic 30.0%
GATATACAACAAAACACTCA+TGG - chr4.4:37523157-37523176 None:intergenic 30.0%
GATATGGATTTGGATATTGA+AGG + chr4.4:37521573-37521592 MS.gene23323:CDS 30.0%
GATCAAACAGGTTATTGAAT+TGG + chr4.4:37521611-37521630 MS.gene23323:CDS 30.0%
GTATGAGAAATTGATCAAAC+AGG + chr4.4:37521599-37521618 MS.gene23323:CDS 30.0%
GTTGTTTGACAAATATTCTG+AGG + chr4.4:37523695-37523714 MS.gene23323:intron 30.0%
TAAAAAAGACATCAAAGTCC+CGG + chr4.4:37523372-37523391 MS.gene23323:CDS 30.0%
TACATAGCATACATAACGTA+AGG - chr4.4:37522395-37522414 None:intergenic 30.0%
TATGCAAAAACACTTAAGCT+TGG - chr4.4:37524891-37524910 None:intergenic 30.0%
TATGTAAAAATAAGGGGTAG+GGG + chr4.4:37525056-37525075 MS.gene23323:CDS 30.0%
TCACGAATTGTATAGTAAGA+TGG + chr4.4:37521680-37521699 MS.gene23323:CDS 30.0%
TCATTAGTTCACTTATCCTT+AGG - chr4.4:37525868-37525887 None:intergenic 30.0%
TGGAATATAACTTTCTGAAC+TGG + chr4.4:37522521-37522540 MS.gene23323:intron 30.0%
TTTCATGTTTAATGCAGCTA+AGG + chr4.4:37525892-37525911 MS.gene23323:intron 30.0%
TTTCCTGCAAAGTAAAACAT+AGG + chr4.4:37522484-37522503 MS.gene23323:intron 30.0%
! AGCAATCCATTTTAAACCTT+GGG + chr4.4:37524537-37524556 MS.gene23323:intron 30.0%
! ATCTGAATGTAATGTTTTGC+TGG + chr4.4:37522137-37522156 MS.gene23323:intron 30.0%
! ATGTTTTCTGCTAAATCTTC+AGG + chr4.4:37524014-37524033 MS.gene23323:intron 30.0%
! CTAAATCCTTTTATCTTCAC+AGG + chr4.4:37525515-37525534 MS.gene23323:intron 30.0%
! GAACATGCTTTTCAAACATA+GGG - chr4.4:37521773-37521792 None:intergenic 30.0%
! TATTTTCTTGCAGCTTTTTG+GGG + chr4.4:37523729-37523748 MS.gene23323:intron 30.0%
! TCAAAAGTACAAAGCTAACA+TGG - chr4.4:37524245-37524264 None:intergenic 30.0%
! TGAACATGCTTTTCAAACAT+AGG - chr4.4:37521774-37521793 None:intergenic 30.0%
! TGATAACTAGTTTATGACTC+TGG + chr4.4:37524480-37524499 MS.gene23323:intron 30.0%
! TGATGATTTGGATATGGATT+TGG + chr4.4:37521563-37521582 MS.gene23323:CDS 30.0%
! TTATGTTCAGTTTGAGACAA+TGG + chr4.4:37525708-37525727 MS.gene23323:intron 30.0%
! TTGAAAAGCATGTTCAAACT+AGG + chr4.4:37521778-37521797 MS.gene23323:CDS 30.0%
! TTTAGTGATAAGTTGGATGA+TGG + chr4.4:37522812-37522831 MS.gene23323:intron 30.0%
! TTTTGATGAACATGGTTACT+AGG + chr4.4:37521742-37521761 MS.gene23323:CDS 30.0%
!! GGTAGATTTTAGTGATAAGT+TGG + chr4.4:37522805-37522824 MS.gene23323:intron 30.0%
!! GTTTTGATCATGTGACTATT+TGG + chr4.4:37522867-37522886 MS.gene23323:intron 30.0%
!! TATTAAGTAACTTGTTGCAC+AGG + chr4.4:37525355-37525374 MS.gene23323:intron 30.0%
!! TGAGTGTTTTGTTGTATATC+AGG + chr4.4:37523157-37523176 MS.gene23323:intron 30.0%
!! TTTTGAAGATATTGAGAGGA+TGG + chr4.4:37521948-37521967 MS.gene23323:intron 30.0%
!!! ATTTGAGTTGATCCTTTTTC+TGG + chr4.4:37524723-37524742 MS.gene23323:intron 30.0%
!!! TGATATGGTTTTGATGAACA+TGG + chr4.4:37521734-37521753 MS.gene23323:CDS 30.0%
!!! TGCTGGCTATTTTGATTTTT+AGG + chr4.4:37522154-37522173 MS.gene23323:intron 30.0%
AAAAAATAGAGGTAAGCCCA+AGG - chr4.4:37524556-37524575 None:intergenic 35.0%
AAATCAAACCTGCCAGAAAA+AGG - chr4.4:37524738-37524757 None:intergenic 35.0%
AAATCAGGGAAGCTATATTC+AGG + chr4.4:37522016-37522035 MS.gene23323:CDS 35.0%
AACAAGTGTCATCGAATTCT+TGG - chr4.4:37522224-37522243 None:intergenic 35.0%
AAGCAAAAATCAGAAGGAAC+AGG - chr4.4:37522435-37522454 None:intergenic 35.0%
AAGTAAGTCTGTGGCTTATT+TGG + chr4.4:37522256-37522275 MS.gene23323:intron 35.0%
AATATAGCTTCCCTGATTTC+TGG - chr4.4:37522015-37522034 None:intergenic 35.0%
ACAAAATGTCTGACAATGCA+AGG + chr4.4:37524097-37524116 MS.gene23323:CDS 35.0%
ACACTAAAAGATCATGGACT+TGG - chr4.4:37523965-37523984 None:intergenic 35.0%
ACTATAAGGATTATGAGGTC+TGG + chr4.4:37524829-37524848 MS.gene23323:intron 35.0%
AGAGAAAAATCTGCTTCTCA+AGG + chr4.4:37521534-37521553 MS.gene23323:CDS 35.0%
AGCAAAAATCAGAAGGAACA+GGG - chr4.4:37522434-37522453 None:intergenic 35.0%
ATAGAGTATAGGGGATTGTT+TGG - chr4.4:37525467-37525486 None:intergenic 35.0%
ATATGCAATTCCTCATGCAT+TGG + chr4.4:37524513-37524532 MS.gene23323:intron 35.0%
ATATTCAGGTGTCTAGTATG+TGG + chr4.4:37522030-37522049 MS.gene23323:CDS 35.0%
ATCATGGAGAAGATGCAAAT+TGG + chr4.4:37525626-37525645 MS.gene23323:CDS 35.0%
ATGAGGAATTTGAATCCTTC+TGG + chr4.4:37521828-37521847 MS.gene23323:CDS 35.0%
ATTACGACTTAGTGAAGCAT+TGG + chr4.4:37525251-37525270 MS.gene23323:CDS 35.0%
CATACTCACTTAGAATGATG+TGG + chr4.4:37524907-37524926 MS.gene23323:intron 35.0%
CCATGAAGGGAATGATTATT+CGG + chr4.4:37521974-37521993 MS.gene23323:CDS 35.0%
CTCATAATCCTTATAGTGCA+GGG - chr4.4:37524826-37524845 None:intergenic 35.0%
CTCCATTATACCAGAAATCA+GGG + chr4.4:37522002-37522021 MS.gene23323:CDS 35.0%
GAAAACAAAAACTCACCAGA+AGG - chr4.4:37521846-37521865 None:intergenic 35.0%
GAAGAAGGACCTGAAAAATA+GGG - chr4.4:37521171-37521190 None:intergenic 35.0%
GAGCTAGATGATGTAAAGAA+AGG + chr4.4:37523628-37523647 MS.gene23323:CDS 35.0%
GCTATGTAAAAATAAGGGGT+AGG + chr4.4:37525054-37525073 MS.gene23323:CDS 35.0%
GGAGGAATACAATAGAGTAT+AGG - chr4.4:37525478-37525497 None:intergenic 35.0%
GTAAAACATAGGCAAATAGC+TGG + chr4.4:37522495-37522514 MS.gene23323:intron 35.0%
GTAATTACACGAGTCATTTC+TGG + chr4.4:37522085-37522104 MS.gene23323:intron 35.0%
TAAACAAATTGTGAGGCTTC+AGG + chr4.4:37522971-37522990 MS.gene23323:CDS 35.0%
TATTGTTTCCCTGCACTATA+AGG + chr4.4:37524815-37524834 MS.gene23323:CDS 35.0%
TCAATTTGATCTAGAAGGTG+AGG + chr4.4:37522713-37522732 MS.gene23323:intron 35.0%
TCATGGAGAAGATGCAAATT+GGG + chr4.4:37525627-37525646 MS.gene23323:CDS 35.0%
TCTCATAACTACTGGTGTTT+CGG + chr4.4:37525553-37525572 MS.gene23323:CDS 35.0%
TCTTAACCTCTTGACAAATG+AGG - chr4.4:37522746-37522765 None:intergenic 35.0%
TGAAGAAGGACCTGAAAAAT+AGG - chr4.4:37521172-37521191 None:intergenic 35.0%
TTAAGAGCTCAACTTCAATG+AGG + chr4.4:37521811-37521830 MS.gene23323:CDS 35.0%
! ATTTTCTTGCAGCTTTTTGG+GGG + chr4.4:37523730-37523749 MS.gene23323:intron 35.0%
! CAGCAATCCATTTTAAACCT+TGG + chr4.4:37524536-37524555 MS.gene23323:intron 35.0%
! TATACTGTTTCTCCTGTTTC+AGG - chr4.4:37523940-37523959 None:intergenic 35.0%
! TGGTGATGATGATTTGGATA+TGG + chr4.4:37521557-37521576 MS.gene23323:CDS 35.0%
! TTGCCTATGTTTTACTTTGC+AGG - chr4.4:37522490-37522509 None:intergenic 35.0%
! TTTGTTGTATATCAGGTGAC+TGG + chr4.4:37523164-37523183 MS.gene23323:intron 35.0%
!! TATCACCTTTTTGCTACTTC+CGG - chr4.4:37525090-37525109 None:intergenic 35.0%
!! TTCCCTGATTTCTGGTATAA+TGG - chr4.4:37522007-37522026 None:intergenic 35.0%
!!! GGGCTTACCTCTATTTTTTA+GGG + chr4.4:37524557-37524576 MS.gene23323:intron 35.0%
!!! TGGGCTTACCTCTATTTTTT+AGG + chr4.4:37524556-37524575 MS.gene23323:intron 35.0%
AAAGAAAGGTCTTCTTTGCC+AGG + chr4.4:37523642-37523661 MS.gene23323:CDS 40.0%
AACTAACCTGGACAAAAGAG+TGG - chr4.4:37524445-37524464 None:intergenic 40.0%
AATAGACTCTCAATCTGCCT+TGG - chr4.4:37525234-37525253 None:intergenic 40.0%
AATAGCAAGCTAACAGTGTG+AGG - chr4.4:37523029-37523048 None:intergenic 40.0%
ACAGGTCGAAAAACATGATG+TGG + chr4.4:37525373-37525392 MS.gene23323:intron 40.0%
ACTAACCTGGACAAAAGAGT+GGG - chr4.4:37524444-37524463 None:intergenic 40.0%
ACTGTTTCAATAGCAAAGGC+AGG + chr4.4:37524312-37524331 MS.gene23323:CDS 40.0%
ACTTTGCCTCATTTGTCAAG+AGG + chr4.4:37522737-37522756 MS.gene23323:intron 40.0%
AGCTAGAAAGATGTGTTACC+TGG - chr4.4:37523663-37523682 None:intergenic 40.0%
AGTTCACTTATCCTTAGGGA+TGG - chr4.4:37525863-37525882 None:intergenic 40.0%
ATAATTGCAGAACATGGAGC+AGG + chr4.4:37524932-37524951 MS.gene23323:intron 40.0%
ATACACAAACTTTCTCCACG+TGG + chr4.4:37523853-37523872 MS.gene23323:CDS 40.0%
ATCAGGTGACTGGTATATAC+AGG + chr4.4:37523174-37523193 MS.gene23323:intron 40.0%
ATGGAGAAGATGCAAATTGG+GGG + chr4.4:37525629-37525648 MS.gene23323:CDS 40.0%
ATGTGAATGATGCGATTCAG+AGG + chr4.4:37521496-37521515 MS.gene23323:CDS 40.0%
ATTCTCCGGAAGTAGCAAAA+AGG + chr4.4:37525082-37525101 MS.gene23323:CDS 40.0%
ATTGTTGGAATCCATTGGAG+TGG - chr4.4:37521068-37521087 None:intergenic 40.0%
CAATATGTTTGGCAAGTCGT+CGG - chr4.4:37524800-37524819 None:intergenic 40.0%
CACTTGTCTCTGTTTATTCC+AGG + chr4.4:37524275-37524294 MS.gene23323:intron 40.0%
CAGCTTCATCTGATAGTTGT+GGG - chr4.4:37525016-37525035 None:intergenic 40.0%
CATGGAGAAGATGCAAATTG+GGG + chr4.4:37525628-37525647 MS.gene23323:CDS 40.0%
CCGAATAATCATTCCCTTCA+TGG - chr4.4:37521977-37521996 None:intergenic 40.0%
CCTCATAATCCTTATAGTGC+AGG - chr4.4:37524827-37524846 None:intergenic 40.0%
CCTGCACTATAAGGATTATG+AGG + chr4.4:37524824-37524843 MS.gene23323:CDS 40.0%
CTCCTTATCAAACCTAGTGT+GGG + chr4.4:37524622-37524641 MS.gene23323:intron 40.0%
CTTATGTCCAACAACTAACC+TGG - chr4.4:37524457-37524476 None:intergenic 40.0%
CTTCACAGGAACTATTGACA+TGG + chr4.4:37525529-37525548 MS.gene23323:intron 40.0%
GAAAAATCTGCTTCTCAAGG+TGG + chr4.4:37521537-37521556 MS.gene23323:CDS 40.0%
GAACCATTGTTGGAATCCAT+TGG - chr4.4:37521073-37521092 None:intergenic 40.0%
GAAGTGATACGAACCATTGT+TGG - chr4.4:37521083-37521102 None:intergenic 40.0%
GACATGGATCTCATAACTAC+TGG + chr4.4:37525545-37525564 MS.gene23323:CDS 40.0%
GACTTAACAGTTCTCTGAGT+TGG - chr4.4:37523221-37523240 None:intergenic 40.0%
GATTATATCGTGAACCGCTA+GGG - chr4.4:37524386-37524405 None:intergenic 40.0%
GCTCACAAGCAAAAATCAGA+AGG - chr4.4:37522441-37522460 None:intergenic 40.0%
GCTCCATTATACCAGAAATC+AGG + chr4.4:37522001-37522020 MS.gene23323:CDS 40.0%
GGACTTGAATTGGAATTGTC+CGG - chr4.4:37521195-37521214 None:intergenic 40.0%
GGTAAGCCCAAGGTTTAAAA+TGG - chr4.4:37524546-37524565 None:intergenic 40.0%
GTCAGCCTTTCATAGATATC+TGG - chr4.4:37523583-37523602 None:intergenic 40.0%
GTGCAGGGAAACAATATGTT+TGG - chr4.4:37524811-37524830 None:intergenic 40.0%
GTTGGCAATTGGACTTGAAT+TGG - chr4.4:37521205-37521224 None:intergenic 40.0%
GTTTGGATAACTACCAGTTC+TGG - chr4.4:37525450-37525469 None:intergenic 40.0%
TAAGATGAATTTCGCTGCCA+GGG - chr4.4:37525788-37525807 None:intergenic 40.0%
TAATACCTCCAATAACCGCA+TGG - chr4.4:37525660-37525679 None:intergenic 40.0%
TACCCACACTAGGTTTGATA+AGG - chr4.4:37524627-37524646 None:intergenic 40.0%
TATCAAACCTAGTGTGGGTA+GGG + chr4.4:37524627-37524646 MS.gene23323:intron 40.0%
TCAGACAAGCATCAATTAGC+AGG - chr4.4:37523523-37523542 None:intergenic 40.0%
TCAGGTGACTGGTATATACA+GGG + chr4.4:37523175-37523194 MS.gene23323:intron 40.0%
TCATGTGACTATTTGGCGTA+AGG + chr4.4:37522874-37522893 MS.gene23323:intron 40.0%
TCTCCTTATCAAACCTAGTG+TGG + chr4.4:37524621-37524640 MS.gene23323:intron 40.0%
TCTCTGTTTATTCCAGGTGA+TGG + chr4.4:37524281-37524300 MS.gene23323:intron 40.0%
TGAACCTACTGTTTGCTTGA+GGG + chr4.4:37522186-37522205 MS.gene23323:CDS 40.0%
TGCTCCATGTTCTGCAATTA+TGG - chr4.4:37524933-37524952 None:intergenic 40.0%
TGTTGTCAATGACAGACAAG+CGG - chr4.4:37524410-37524429 None:intergenic 40.0%
TTAAGATGAATTTCGCTGCC+AGG - chr4.4:37525789-37525808 None:intergenic 40.0%
TTATCAAACCTAGTGTGGGT+AGG + chr4.4:37524626-37524645 MS.gene23323:intron 40.0%
TTATTGCTTCCCTCAATGCA+AGG + chr4.4:37524337-37524356 MS.gene23323:CDS 40.0%
TTCTCCTGTTTCAGGATCTT+TGG - chr4.4:37523932-37523951 None:intergenic 40.0%
TTTGCTTGTGAGCAAATCAG+TGG + chr4.4:37522448-37522467 MS.gene23323:intron 40.0%
! AATCTTCAGGTTCTTGAGAG+TGG + chr4.4:37524027-37524046 MS.gene23323:intron 40.0%
! ACTCCAATGGATTCCAACAA+TGG + chr4.4:37521067-37521086 MS.gene23323:CDS 40.0%
! TCAAGGTGGTGATGATGATT+TGG + chr4.4:37521551-37521570 MS.gene23323:CDS 40.0%
! TTGGCGTAAGGTTTTTCACT+TGG + chr4.4:37522886-37522905 MS.gene23323:intron 40.0%
!! AATGCTTTGAAGTTGGCATC+TGG + chr4.4:37523754-37523773 MS.gene23323:CDS 40.0%
!! CTTGCTATTGCATGACAAAC+TGG + chr4.4:37523040-37523059 MS.gene23323:CDS 40.0%
!! CTTTTGTCCAGGTTAGTTGT+TGG + chr4.4:37524447-37524466 MS.gene23323:intron 40.0%
!!! GGTGCTTGCCATTTTTGATA+TGG + chr4.4:37521719-37521738 MS.gene23323:CDS 40.0%
!!! TTTTTCAGGTCCTTCTTCAC+CGG + chr4.4:37521173-37521192 MS.gene23323:intron 40.0%
AACCGATGCAAGTAAGTCTG+TGG + chr4.4:37522247-37522266 MS.gene23323:intron 45.0%
AAGGATGAGGCGAGAAAGTT+TGG + chr4.4:37525583-37525602 MS.gene23323:CDS 45.0%
AGACACTCGCAACATGATCA+TGG + chr4.4:37525610-37525629 MS.gene23323:CDS 45.0%
AGCCACAGACTTACTTGCAT+CGG - chr4.4:37522252-37522271 None:intergenic 45.0%
AGGTAATAACGGCAACTCCA+AGG + chr4.4:37525214-37525233 MS.gene23323:intron 45.0%
ATACAGGGCTATGAGTGTCA+GGG + chr4.4:37523190-37523209 MS.gene23323:CDS 45.0%
ATCAAACCTAGTGTGGGTAG+GGG + chr4.4:37524628-37524647 MS.gene23323:intron 45.0%
ATGGAGTGATTGATTGACGG+CGG - chr4.4:37521254-37521273 None:intergenic 45.0%
CATCAATGCAGCAGATACCT+CGG - chr4.4:37524071-37524090 None:intergenic 45.0%
CATGGAAACAAATCCTTCGC+TGG - chr4.4:37525937-37525956 None:intergenic 45.0%
CGAAAAACATGATGTGGTGG+AGG + chr4.4:37525379-37525398 MS.gene23323:CDS 45.0%
CGGATGGAGTGATTGATTGA+CGG - chr4.4:37521257-37521276 None:intergenic 45.0%
CGTCAATCAATCACTCCATC+CGG + chr4.4:37521255-37521274 MS.gene23323:CDS 45.0%
CTGAACCTACTGTTTGCTTG+AGG + chr4.4:37522185-37522204 MS.gene23323:CDS 45.0%
GAACTAAAGAATCAGAGCCC+TGG + chr4.4:37525768-37525787 MS.gene23323:CDS 45.0%
GACACAATTAAACTGCCAGC+AGG - chr4.4:37522587-37522606 None:intergenic 45.0%
GACTTTCCTATGTCTTCCGA+AGG + chr4.4:37521405-37521424 MS.gene23323:CDS 45.0%
GAGAGGATGGTATCCATGAA+GGG + chr4.4:37521961-37521980 MS.gene23323:CDS 45.0%
GATGCTATGGAGGTTGACAA+TGG + chr4.4:37523407-37523426 MS.gene23323:CDS 45.0%
GATGGAGCAAGCATAAACAC+TGG - chr4.4:37525845-37525864 None:intergenic 45.0%
GCAGCTTCATCTGATAGTTG+TGG - chr4.4:37525017-37525036 None:intergenic 45.0%
GCTATTGCATGACAAACTGG+TGG + chr4.4:37523043-37523062 MS.gene23323:CDS 45.0%
GGAAGACATAGGAAAGTCCT+CGG - chr4.4:37521403-37521422 None:intergenic 45.0%
GGAATCCATTGGAGTGGAAT+CGG - chr4.4:37521062-37521081 None:intergenic 45.0%
GGATTATATCGTGAACCGCT+AGG - chr4.4:37524387-37524406 None:intergenic 45.0%
GGTCGAAAAACATGATGTGG+TGG + chr4.4:37525376-37525395 MS.gene23323:intron 45.0%
GTGGCCATAATTGCAGAACA+TGG + chr4.4:37524926-37524945 MS.gene23323:intron 45.0%
GTGTAATTACCTCTCTCCAC+CGG - chr4.4:37522075-37522094 None:intergenic 45.0%
GTTGTCAATGACAGACAAGC+GGG - chr4.4:37524409-37524428 None:intergenic 45.0%
GTTGTGGGTGTATGTGCTTT+CGG - chr4.4:37525001-37525020 None:intergenic 45.0%
TATACAGGGCTATGAGTGTC+AGG + chr4.4:37523189-37523208 MS.gene23323:CDS 45.0%
TCGGATTCGCTTCTCAGAAT+CGG + chr4.4:37525275-37525294 MS.gene23323:CDS 45.0%
TCTGCAATGGATACCAGAAC+TGG + chr4.4:37525434-37525453 MS.gene23323:CDS 45.0%
TCTTCCCTCAAGCAAACAGT+AGG - chr4.4:37522193-37522212 None:intergenic 45.0%
TGAAAGGCTGACAAAGTCAC+TGG + chr4.4:37523591-37523610 MS.gene23323:CDS 45.0%
TGAGAGGATGGTATCCATGA+AGG + chr4.4:37521960-37521979 MS.gene23323:CDS 45.0%
TGCAATGCAGCAATCTGCAA+TGG + chr4.4:37525421-37525440 MS.gene23323:CDS 45.0%
TGGCATTTACACCAGTGGAA+GGG + chr4.4:37523873-37523892 MS.gene23323:CDS 45.0%
TTAGTCCCCCAAACGTAAGT+CGG - chr4.4:37521462-37521481 None:intergenic 45.0%
TTATGCTTGCTCCATCCCTA+AGG + chr4.4:37525849-37525868 MS.gene23323:intron 45.0%
TTCCCTCAATGCAAGGACTT+CGG + chr4.4:37524344-37524363 MS.gene23323:CDS 45.0%
TTGATGCTTGTCTGAGTCTC+AGG + chr4.4:37523528-37523547 MS.gene23323:intron 45.0%
TTGGAATTGTCCGGTGAAGA+AGG - chr4.4:37521186-37521205 None:intergenic 45.0%
TTGGGGGACTAACATTAGTG+TGG + chr4.4:37521470-37521489 MS.gene23323:CDS 45.0%
TTGTACCAGGATCACCAACA+AGG - chr4.4:37523810-37523829 None:intergenic 45.0%
TTGTCAATGACAGACAAGCG+GGG - chr4.4:37524408-37524427 None:intergenic 45.0%
TTGTGGGTGTATGTGCTTTC+GGG - chr4.4:37525000-37525019 None:intergenic 45.0%
TTTCCTATGTCTTCCGAAGG+CGG + chr4.4:37521408-37521427 MS.gene23323:CDS 45.0%
! ATCGGTTAGTTGAGCTTGCT+TGG + chr4.4:37525293-37525312 MS.gene23323:intron 45.0%
! CAGCGAAGGATTTGTTTCCA+TGG + chr4.4:37525935-37525954 MS.gene23323:CDS 45.0%
! CATGACAAACTGGTGGATAC+TGG + chr4.4:37523050-37523069 MS.gene23323:CDS 45.0%
! GAAGGATTTGTTTCCATGGC+TGG + chr4.4:37525939-37525958 MS.gene23323:CDS 45.0%
! GATAAGTTGGATGATGGCCA+TGG + chr4.4:37522818-37522837 MS.gene23323:intron 45.0%
! TAAGATGGTGAGGTATCCTC+TGG + chr4.4:37521695-37521714 MS.gene23323:CDS 45.0%
! TCATCTAGCTCCCAGATGTT+TGG - chr4.4:37523619-37523638 None:intergenic 45.0%
! TTTTACACTGTCACCAGCCA+TGG - chr4.4:37525955-37525974 None:intergenic 45.0%
!! ATGATGTGGTGGAGGCATTT+CGG + chr4.4:37525387-37525406 MS.gene23323:CDS 45.0%
!! ATTCTCCTTGTTGGTGATCC+TGG + chr4.4:37523802-37523821 MS.gene23323:CDS 45.0%
!! CAGTTTGTTGTTCCATCACC+TGG - chr4.4:37524296-37524315 None:intergenic 45.0%
!! GACTTAGTGAAGCATTGGCT+CGG + chr4.4:37525256-37525275 MS.gene23323:CDS 45.0%
!! GAGTTGATCCTTTTTCTGGC+AGG + chr4.4:37524727-37524746 MS.gene23323:intron 45.0%
AAAATGGCAAGCACCTCCAG+AGG - chr4.4:37521714-37521733 None:intergenic 50.0%
AAAGCCAGGTGACAGAGTTG+AGG + chr4.4:37523073-37523092 MS.gene23323:CDS 50.0%
AAATTGGGGGACGTTCCATG+CGG + chr4.4:37525642-37525661 MS.gene23323:CDS 50.0%
AACCTGGACAAAAGAGTGGG+AGG - chr4.4:37524441-37524460 None:intergenic 50.0%
AAGCGAGATCTGTTCGGTTG+AGG - chr4.4:37521285-37521304 None:intergenic 50.0%
ACACCGAAGTCCTTGCATTG+AGG - chr4.4:37524350-37524369 None:intergenic 50.0%
ACACCTGACGAGATACCTGA+AGG + chr4.4:37522996-37523015 MS.gene23323:CDS 50.0%
ACCTCGGTCGCTCAAAACTA+GGG - chr4.4:37524055-37524074 None:intergenic 50.0%
ACGTTCCATGCGGTTATTGG+AGG + chr4.4:37525652-37525671 MS.gene23323:CDS 50.0%
AGACATAGGAAAGTCCTCGG+AGG - chr4.4:37521400-37521419 None:intergenic 50.0%
AGGGGTAGGGGAAAATTCTC+CGG + chr4.4:37525068-37525087 MS.gene23323:CDS 50.0%
ATGCTTGTCTGAGTCTCAGG+TGG + chr4.4:37523531-37523550 MS.gene23323:intron 50.0%
ATGGAGGTTGACAATGGCCA+GGG + chr4.4:37523413-37523432 MS.gene23323:CDS 50.0%
ATGTGGATTCTGCTCTGACC+CGG + chr4.4:37522047-37522066 MS.gene23323:CDS 50.0%
ATGTTTGGCAAGTCGTCGGT+CGG - chr4.4:37524796-37524815 None:intergenic 50.0%
CACCGAAGTCCTTGCATTGA+GGG - chr4.4:37524349-37524368 None:intergenic 50.0%
CATAGGCAAATAGCTGGACG+TGG + chr4.4:37522501-37522520 MS.gene23323:intron 50.0%
CTTCTTCTGGATTTCTGCCC+TGG - chr4.4:37523433-37523452 None:intergenic 50.0%
GAACATGGAGCAGGATGTGT+TGG + chr4.4:37524941-37524960 MS.gene23323:intron 50.0%
GAAGCGAAGCGAGATCTGTT+CGG - chr4.4:37521291-37521310 None:intergenic 50.0%
GCATTTACACCAGTGGAAGG+GGG + chr4.4:37523875-37523894 MS.gene23323:CDS 50.0%
GGCATTTACACCAGTGGAAG+GGG + chr4.4:37523874-37523893 MS.gene23323:CDS 50.0%
GGGGACTAACATTAGTGTGG+AGG + chr4.4:37521473-37521492 MS.gene23323:CDS 50.0%
GGTTGGATTGACTGCTTACG+TGG + chr4.4:37523906-37523925 MS.gene23323:CDS 50.0%
GTCTCAGGTGGCTAAACTGA+AGG + chr4.4:37523543-37523562 MS.gene23323:intron 50.0%
GTGGCATTTACACCAGTGGA+AGG + chr4.4:37523872-37523891 MS.gene23323:CDS 50.0%
GTGGCCAAAGATCCTGAAAC+AGG + chr4.4:37523925-37523944 MS.gene23323:CDS 50.0%
TACCTCGGTCGCTCAAAACT+AGG - chr4.4:37524056-37524075 None:intergenic 50.0%
TAGCATCCTCAACCAGCATC+CGG - chr4.4:37523394-37523413 None:intergenic 50.0%
TATGGAGGTTGACAATGGCC+AGG + chr4.4:37523412-37523431 MS.gene23323:CDS 50.0%
TGGACAAAAGAGTGGGAGGA+AGG - chr4.4:37524437-37524456 None:intergenic 50.0%
TGGATTGCTGCCAATGCATG+AGG - chr4.4:37524526-37524545 None:intergenic 50.0%
TTTCGGCAAGCGAAAGGATG+AGG + chr4.4:37525570-37525589 MS.gene23323:CDS 50.0%
! AGGAGCATGTTACACGAGGT+TGG + chr4.4:37524117-37524136 MS.gene23323:intron 50.0%
! CAATGCAAGGACTTCGGTGT+TGG + chr4.4:37524350-37524369 MS.gene23323:CDS 50.0%
! GATGCTGGTTGAGGATGCTA+TGG + chr4.4:37523394-37523413 MS.gene23323:CDS 50.0%
! TCTGTTCGGTTGAGGTGTTC+CGG - chr4.4:37521277-37521296 None:intergenic 50.0%
! TGCAAGGAGCATGTTACACG+AGG + chr4.4:37524113-37524132 MS.gene23323:CDS 50.0%
! TTCCTCCCACTCTTTTGTCC+AGG + chr4.4:37524436-37524455 MS.gene23323:CDS 50.0%
!! GAGGAGTAGGTGTTGGCAAT+TGG - chr4.4:37521216-37521235 None:intergenic 50.0%
!! TGGGGGCAATGCTTTGAAGT+TGG + chr4.4:37523747-37523766 MS.gene23323:CDS 50.0%
AACCTAGTGTGGGTAGGGGT+TGG + chr4.4:37524632-37524651 MS.gene23323:intron 55.0%
AAGTCCTCGGAGGTGGAAGT+TGG - chr4.4:37521390-37521409 None:intergenic 55.0%
ACGCTGGTCCGACTTACGTT+TGG + chr4.4:37521451-37521470 MS.gene23323:CDS 55.0%
AGCATCCTCAACCAGCATCC+GGG - chr4.4:37523393-37523412 None:intergenic 55.0%
AGGGCTATGAGTGTCAGGGT+AGG + chr4.4:37523194-37523213 MS.gene23323:CDS 55.0%
AGTCACTGGCGCCAAACATC+TGG + chr4.4:37523605-37523624 MS.gene23323:CDS 55.0%
ATTCTGCTCTGACCCGGTTC+CGG + chr4.4:37522053-37522072 MS.gene23323:CDS 55.0%
CATAGGAAAGTCCTCGGAGG+TGG - chr4.4:37521397-37521416 None:intergenic 55.0%
CCACGTGGCATTTACACCAG+TGG + chr4.4:37523868-37523887 MS.gene23323:CDS 55.0%
CCACTGGTGTAAATGCCACG+TGG - chr4.4:37523871-37523890 None:intergenic 55.0%
CCTCCTTCAGGTATCTCGTC+AGG - chr4.4:37523002-37523021 None:intergenic 55.0%
CCTGACGAGATACCTGAAGG+AGG + chr4.4:37522999-37523018 MS.gene23323:CDS 55.0%
CGCTGGTCCGACTTACGTTT+GGG + chr4.4:37521452-37521471 MS.gene23323:CDS 55.0%
CTCACCTCAACTCTGTCACC+TGG - chr4.4:37523080-37523099 None:intergenic 55.0%
CTGGTCCGACTTACGTTTGG+GGG + chr4.4:37521454-37521473 MS.gene23323:CDS 55.0%
CTGGTGTTTCGGCAAGCGAA+AGG + chr4.4:37525564-37525583 MS.gene23323:CDS 55.0%
GACATCAAAGTCCCGGATGC+TGG + chr4.4:37523379-37523398 MS.gene23323:CDS 55.0%
GCTGGTCCGACTTACGTTTG+GGG + chr4.4:37521453-37521472 MS.gene23323:CDS 55.0%
GCTGGTTGAGGATGCTATGG+AGG + chr4.4:37523397-37523416 MS.gene23323:CDS 55.0%
GGCTTCCGATTCCACTCCAA+TGG + chr4.4:37521054-37521073 MS.gene23323:CDS 55.0%
GGGACGTTCCATGCGGTTAT+TGG + chr4.4:37525649-37525668 MS.gene23323:CDS 55.0%
GGTTACGACATGGATGACGC+TGG + chr4.4:37521435-37521454 MS.gene23323:CDS 55.0%
GTCACTGGCGCCAAACATCT+GGG + chr4.4:37523606-37523625 MS.gene23323:CDS 55.0%
TGATTGATTGACGGCGGCGA+CGG - chr4.4:37521248-37521267 None:intergenic 55.0%
TTACCTCTCTCCACCGGAAC+CGG - chr4.4:37522069-37522088 None:intergenic 55.0%
! AAAGTCCCGGATGCTGGTTG+AGG + chr4.4:37523385-37523404 MS.gene23323:CDS 55.0%
! AGCTGCGACTTGCTTGTACC+AGG - chr4.4:37523823-37523842 None:intergenic 55.0%
! CTGGTGGATACTGGAAAGCC+AGG + chr4.4:37523059-37523078 MS.gene23323:CDS 55.0%
! GATGGTGAGGTATCCTCTGG+AGG + chr4.4:37521698-37521717 MS.gene23323:CDS 55.0%
! TTCGGTTGAGGTGTTCCGGA+TGG - chr4.4:37521273-37521292 None:intergenic 55.0%
!! AAGTTGGTGTGGCAGGGACA+CGG - chr4.4:37521374-37521393 None:intergenic 55.0%
!! AGGTGGAAGTTGGTGTGGCA+GGG - chr4.4:37521380-37521399 None:intergenic 55.0%
!! TTGGCTTGCGCAAACCCTAG+CGG + chr4.4:37524369-37524388 MS.gene23323:CDS 55.0%
ATGTCTTCCGAAGGCGGCGA+CGG + chr4.4:37521414-37521433 MS.gene23323:CDS 60.0%
CACACCAACTTCCACCTCCG+AGG + chr4.4:37521383-37521402 MS.gene23323:CDS 60.0%
GGGAGTTGGAGTGGCATCAG+AGG - chr4.4:37521313-37521332 None:intergenic 60.0%
GTTGCTACTCTCGCCAGCGA+AGG + chr4.4:37525921-37525940 MS.gene23323:CDS 60.0%
TACCTCTCTCCACCGGAACC+GGG - chr4.4:37522068-37522087 None:intergenic 60.0%
TCGCCGCCTTCGGAAGACAT+AGG - chr4.4:37521414-37521433 None:intergenic 60.0%
TGCCAACCCCTACCCACACT+AGG - chr4.4:37524637-37524656 None:intergenic 60.0%
! GTGTGAGGCGTTCCTCCTTC+AGG - chr4.4:37523014-37523033 None:intergenic 60.0%
!! CTCGGAGGTGGAAGTTGGTG+TGG - chr4.4:37521385-37521404 None:intergenic 60.0%
!! GAGGTGGAAGTTGGTGTGGC+AGG - chr4.4:37521381-37521400 None:intergenic 60.0%
!! GCATCTGGCGCTAGCTTTCG+TGG + chr4.4:37523769-37523788 MS.gene23323:CDS 60.0%
!! GGTGGAGGCATTTCGGCTTC+TGG + chr4.4:37525394-37525413 MS.gene23323:CDS 60.0%
!!! GCCCTAGTTTTGAGCGACCG+AGG + chr4.4:37524051-37524070 MS.gene23323:CDS 60.0%
AGGCGGCGACGGTTACGACA+TGG + chr4.4:37521425-37521444 MS.gene23323:CDS 65.0%
CAGTGGAAGGGGGAGCTCAG+CGG + chr4.4:37523885-37523904 MS.gene23323:CDS 65.0%
GCCAACACCTACTCCTCCCC+CGG + chr4.4:37521219-37521238 MS.gene23323:CDS 65.0%
GTCGTAACCGTCGCCGCCTT+CGG - chr4.4:37521424-37521443 None:intergenic 65.0%
TGGAAGGGATGCCGCCACCA+CGG - chr4.4:37521347-37521366 None:intergenic 65.0%
TTGATTGACGGCGGCGACGG+CGG - chr4.4:37521245-37521264 None:intergenic 65.0%
TTGGTGTGGCAGGGACACGG+CGG - chr4.4:37521371-37521390 None:intergenic 65.0%
! GTGACGGGAGGGAGTTGGAG+TGG - chr4.4:37521322-37521341 None:intergenic 65.0%
AAGGGATGCCGCCACCACGG+CGG - chr4.4:37521344-37521363 None:intergenic 70.0%
CAGGGACACGGCGGCTGGAA+GGG - chr4.4:37521362-37521381 None:intergenic 70.0%
CGCTGAGCTCCCCCTTCCAC+TGG - chr4.4:37523887-37523906 None:intergenic 70.0%
CTGCTCTGACCCGGTTCCGG+TGG + chr4.4:37522056-37522075 MS.gene23323:CDS 70.0%
GACCCGGTTCCGGTGGAGAG+AGG + chr4.4:37522063-37522082 MS.gene23323:CDS 70.0%
GCCGGGGGAGGAGTAGGTGT+TGG - chr4.4:37521223-37521242 None:intergenic 70.0%
GGAAGGGGGAGCTCAGCGGT+TGG + chr4.4:37523889-37523908 MS.gene23323:CDS 70.0%
ACTCCCTCCCGTCACCGCCG+TGG + chr4.4:37521327-37521346 MS.gene23323:CDS 75.0%
GCAGGGACACGGCGGCTGGA+AGG - chr4.4:37521363-37521382 None:intergenic 75.0%
TCCCGTCACCGCCGTGGTGG+CGG + chr4.4:37521333-37521352 MS.gene23323:CDS 75.0%
TGCCGCCACCACGGCGGTGA+CGG - chr4.4:37521338-37521357 None:intergenic 75.0%
TGTGGCAGGGACACGGCGGC+TGG - chr4.4:37521367-37521386 None:intergenic 75.0%
!! CCACCACGGCGGTGACGGGA+GGG - chr4.4:37521333-37521352 None:intergenic 75.0%
!! CGGCGGTGACGGGAGGGAGT+TGG - chr4.4:37521327-37521346 None:intergenic 75.0%
! ACGGCGGCCGGGGGAGGAGT+AGG - chr4.4:37521229-37521248 None:intergenic 80.0%
! CCCTCCCGTCACCGCCGTGG+TGG + chr4.4:37521330-37521349 MS.gene23323:CDS 80.0%
! GCCGCCACCACGGCGGTGAC+GGG - chr4.4:37521337-37521356 None:intergenic 80.0%
! TTGACGGCGGCGACGGCGGC+CGG - chr4.4:37521241-37521260 None:intergenic 80.0%
!!! GCCACCACGGCGGTGACGGG+AGG - chr4.4:37521334-37521353 None:intergenic 80.0%
! TGACGGCGGCGACGGCGGCC+GGG - chr4.4:37521240-37521259 None:intergenic 85.0%
! ACGGCGGCGACGGCGGCCGG+GGG - chr4.4:37521238-37521257 None:intergenic 90.0%
! GACGGCGGCGACGGCGGCCG+GGG - chr4.4:37521239-37521258 None:intergenic 90.0%
! GCGGCGACGGCGGCCGGGGG+AGG - chr4.4:37521235-37521254 None:intergenic 95.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 37521052 37525983 37521052 ID=MS.gene23323
chr4.4 mRNA 37521052 37525983 37521052 ID=MS.gene23323.t1;Parent=MS.gene23323
chr4.4 exon 37521052 37521088 37521052 ID=MS.gene23323.t1.exon1;Parent=MS.gene23323.t1
chr4.4 CDS 37521052 37521088 37521052 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37521181 37521849 37521181 ID=MS.gene23323.t1.exon2;Parent=MS.gene23323.t1
chr4.4 CDS 37521181 37521849 37521181 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37521956 37522084 37521956 ID=MS.gene23323.t1.exon3;Parent=MS.gene23323.t1
chr4.4 CDS 37521956 37522084 37521956 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37522176 37522257 37522176 ID=MS.gene23323.t1.exon4;Parent=MS.gene23323.t1
chr4.4 CDS 37522176 37522257 37522176 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37522962 37523094 37522962 ID=MS.gene23323.t1.exon5;Parent=MS.gene23323.t1
chr4.4 CDS 37522962 37523094 37522962 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37523179 37523250 37523179 ID=MS.gene23323.t1.exon6;Parent=MS.gene23323.t1
chr4.4 CDS 37523179 37523250 37523179 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37523350 37523472 37523350 ID=MS.gene23323.t1.exon7;Parent=MS.gene23323.t1
chr4.4 CDS 37523350 37523472 37523350 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37523550 37523663 37523550 ID=MS.gene23323.t1.exon8;Parent=MS.gene23323.t1
chr4.4 CDS 37523550 37523663 37523550 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37523742 37523954 37523742 ID=MS.gene23323.t1.exon9;Parent=MS.gene23323.t1
chr4.4 CDS 37523742 37523954 37523742 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37524036 37524134 37524036 ID=MS.gene23323.t1.exon10;Parent=MS.gene23323.t1
chr4.4 CDS 37524036 37524134 37524036 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37524297 37524457 37524297 ID=MS.gene23323.t1.exon11;Parent=MS.gene23323.t1
chr4.4 CDS 37524297 37524457 37524297 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37524749 37524845 37524749 ID=MS.gene23323.t1.exon12;Parent=MS.gene23323.t1
chr4.4 CDS 37524749 37524845 37524749 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37524942 37525103 37524942 ID=MS.gene23323.t1.exon13;Parent=MS.gene23323.t1
chr4.4 CDS 37524942 37525103 37524942 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37525216 37525296 37525216 ID=MS.gene23323.t1.exon14;Parent=MS.gene23323.t1
chr4.4 CDS 37525216 37525296 37525216 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37525377 37525455 37525377 ID=MS.gene23323.t1.exon15;Parent=MS.gene23323.t1
chr4.4 CDS 37525377 37525455 37525377 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37525537 37525673 37525537 ID=MS.gene23323.t1.exon16;Parent=MS.gene23323.t1
chr4.4 CDS 37525537 37525673 37525537 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37525759 37525812 37525759 ID=MS.gene23323.t1.exon17;Parent=MS.gene23323.t1
chr4.4 CDS 37525759 37525812 37525759 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
chr4.4 exon 37525909 37525983 37525909 ID=MS.gene23323.t1.exon18;Parent=MS.gene23323.t1
chr4.4 CDS 37525909 37525983 37525909 ID=cds.MS.gene23323.t1;Parent=MS.gene23323.t1
Gene Sequence

>MS.gene23323

ATGGCTTCCGATTCCACTCCAATGGATTCCAACAATGGTTCGTATCACTTCACTTTTCTTCCATCTTCTTATTCAGATTTCTAATTTTTTAATTTTTTTCACTCATAATTTTGAAACCCTATTTTTCAGGTCCTTCTTCACCGGACAATTCCAATTCAAGTCCAATTGCCAACACCTACTCCTCCCCCGGCCGCCGTCGCCGCCGTCAATCAATCACTCCATCCGGAACACCTCAACCGAACAGATCTCGCTTCGCTTCCTCTGATGCCACTCCAACTCCCTCCCGTCACCGCCGTGGTGGCGGCATCCCTTCCAGCCGCCGTGTCCCTGCCACACCAACTTCCACCTCCGAGGACTTTCCTATGTCTTCCGAAGGCGGCGACGGTTACGACATGGATGACGCTGGTCCGACTTACGTTTGGGGGACTAACATTAGTGTGGAGGATGTGAATGATGCGATTCAGAGGTTTTTGAAGCATTTTAGAGAAAAATCTGCTTCTCAAGGTGGTGATGATGATTTGGATATGGATTTGGATATTGAAGGGAAGTATGAGAAATTGATCAAACAGGTTATTGAATTGGAAGGTGAGTCTATTGATGTTGATGCACGTGATGTGTTTGATCACGATCACGAATTGTATAGTAAGATGGTGAGGTATCCTCTGGAGGTGCTTGCCATTTTTGATATGGTTTTGATGAACATGGTTACTAGGATGAACCCTATGTTTGAAAAGCATGTTCAAACTAGGATTTTTAATCTTAAGAGCTCAACTTCAATGAGGAATTTGAATCCTTCTGGTGAGTTTTTGTTTTCTGAAATTATTGTTATTCAATTCAACTTTGTGCGTTTGATTGTTAGCAATTAGATTTATATGTGATGATAGTTTGTGGTTTTGTTTTGAAGATATTGAGAGGATGGTATCCATGAAGGGAATGATTATTCGGTGTAGCTCCATTATACCAGAAATCAGGGAAGCTATATTCAGGTGTCTAGTATGTGGATTCTGCTCTGACCCGGTTCCGGTGGAGAGAGGTAATTACACGAGTCATTTCTGGTTATTTATGTAGTTAAATGTTGTGTTCATATCTGAATGTAATGTTTTGCTGGCTATTTTGATTTTTAGGACGAATTGCTGAACCTACTGTTTGCTTGAGGGAAGAGTGTCAGTCCAAGAATTCGATGACACTTGTTCACAACCGATGCAAGTAAGTCTGTGGCTTATTTGGAATTGTAGTTCTATATTTTGACTGTTGGATAGTGTTGCAGTTTGCATGAATGATATTTGATGTTGAAGGGTCTATATTTTGAAGCAAGCTTCTTTTAGCTTTTTTCGGTTAACCCTTACGTTATGTATGCTATGTATAATAATTAGTCAGTTCCCTGTTCCTTCTGATTTTTGCTTGTGAGCAAATCAGTGGCAGCACTGAAAATTTTCCTGCAAAGTAAAACATAGGCAAATAGCTGGACGTGGAATATAACTTTCTGAACTGGTCTAATACTAATCTATTTCTAAGTAAAAAACTACTATTAACCTGCTGGCAGTTTAATTGTGTCTATTTCCAATAATTTTTTTTTGTTTGGCAAGTCAAAAGTATATTTGACAATTCCAGTATGGTGATTCAATAATGTCTGCCTAAAATCGGGTAATTTTTTACAATAATCAATTTGATCTAGAAGGTGAGGAACTTTGCCTCATTTGTCAAGAGGTTAAGATAACTACAAGTTTGAAAAATAATCATTTGAATTGTACTGGGTAGATTTTAGTGATAAGTTGGATGATGGCCATGGTCATTAGCTTCTATTTTGAACAATGTGTTTTGATCATGTGACTATTTGGCGTAAGGTTTTTCACTTGGATTTCAGTTCATAAACCTTGAAACTGCAATTAACATATCTTCTCTAATTTCAGGTTTACTGATAAACAAATTGTGAGGCTTCAGGAGACACCTGACGAGATACCTGAAGGAGGAACGCCTCACACTGTTAGCTTGCTATTGCATGACAAACTGGTGGATACTGGAAAGCCAGGTGACAGAGTTGAGGTGAGACTATGCCATGACATACTCTGATAAATAGATATTCTTATGTTTGTTCAATCGTCCCATGAGTGTTTTGTTGTATATCAGGTGACTGGTATATACAGGGCTATGAGTGTCAGGGTAGGACCAACTCAGAGAACTGTTAAGTCATTGTTCAAAGTATGGGTTACCTTCTCAAACTCATTTGCATTTAAAGCTTCTGCTTTGCATTTTTCATCTTGTCTAATTGACATTTGTTTTGTTCTATTCATGTTGTAGACGTATATTGATTGTCTTCACATAAAAAAGACATCAAAGTCCCGGATGCTGGTTGAGGATGCTATGGAGGTTGACAATGGCCAGGGCAGAAATCCAGAAGAAGTTTTATTTGATGAAGAAAAGGTACATTTTGTACATCTCTTCAACGAATTATCTGCTTGTTTTATTCACCTGCTAATTGATGCTTGTCTGAGTCTCAGGTGGCTAAACTGAAGGAGCTCTCAAAACAACCAGATATCTATGAAAGGCTGACAAAGTCACTGGCGCCAAACATCTGGGAGCTAGATGATGTAAAGAAAGGTCTTCTTTGCCAGGTAACACATCTTTCTAGCTACTCTTTCATTTGTTGTTTGACAAATATTCTGAGGATGCTAGTTTTTATTTTCTTGCAGCTTTTTGGGGGCAATGCTTTGAAGTTGGCATCTGGCGCTAGCTTTCGTGGTGATATAAATATTCTCCTTGTTGGTGATCCTGGTACAAGCAAGTCGCAGCTACTTCAGTACATACACAAACTTTCTCCACGTGGCATTTACACCAGTGGAAGGGGGAGCTCAGCGGTTGGATTGACTGCTTACGTGGCCAAAGATCCTGAAACAGGAGAAACAGTATAGACCAAGTCCATGATCTTTTAGTGTCTAATGTACAAGAAATGCAATGGAGTCTAATGTTTTCTGCTAAATCTTCAGGTTCTTGAGAGTGGTGCCCTAGTTTTGAGCGACCGAGGTATCTGCTGCATTGATGAATTTGACAAAATGTCTGACAATGCAAGGAGCATGTTACACGAGGTTGGTTTCATTTTTTGTCAGCATGTATTTATGCAGTCCTATCTGCTTGTTTTTTCTAAAAACTTTGCATGGATTGAAAAATATATACACTATGATTTCGTGCTTTACCATGTTAGCTTTGTACTTTTGACTAACCAATACACTTGTCTCTGTTTATTCCAGGTGATGGAACAACAAACTGTTTCAATAGCAAAGGCAGGCATTATTGCTTCCCTCAATGCAAGGACTTCGGTGTTGGCTTGCGCAAACCCTAGCGGTTCACGATATAATCCCCGCTTGTCTGTCATTGACAACATACACCTTCCTCCCACTCTTTTGTCCAGGTTAGTTGTTGGACATAAGTCGTGATAACTAGTTTATGACTCTGGCTACGTATTTATATGCAATTCCTCATGCATTGGCAGCAATCCATTTTAAACCTTGGGCTTACCTCTATTTTTTAGGGTTTTCATTGGCATGCAACATAAGATTGAATTTGTTGTTGATTCTCCTTATCAAACCTAGTGTGGGTAGGGGTTGGCATAAAGCAAAAAATTCTCTTTAAAAATAAATGGAAGCTACTAGACAGTTTTGCAAGTGTTGCTATTGATTTGAGTTGATCCTTTTTCTGGCAGGTTTGATTTAATTTACTTAATGCTTGATAAGGCTGATGAACAGACCGACCGACGACTTGCCAAACATATTGTTTCCCTGCACTATAAGGATTATGAGGTCTGGTTATAATCTTGTAATCATCTTATTCAAGATTAAGATCCAAGCTTAAGTGTTTTTGCATACTCACTTAGAATGATGTGGCCATAATTGCAGAACATGGAGCAGGATGTGTTGGACATTTCTACACTAACTGATTATGTTAGCTATGCCCGAAAGCACATACACCCACAACTATCAGATGAAGCTGCTGATGAATTGATTACAGGCTATGTAAAAATAAGGGGTAGGGGAAAATTCTCCGGAAGTAGCAAAAAGGTGATACAAAGTGAATTACTTGATATTAGAATTATGCTTATTTTAATTTTTTTCTTCTTCATGTTTCACTGTTGTGTATGTTAATCTTGCCTATCTATCAATTAATTAACAGGTAATAACGGCAACTCCAAGGCAGATTGAGAGTCTATTACGACTTAGTGAAGCATTGGCTCGGATTCGCTTCTCAGAATCGGTTAGTTGAGCTTGCTTGGTCTCTTCCTGATTTGTAGAAAAAAAATAGCATGCAGAATTATTAAGTAACTTGTTGCACAGGTCGAAAAACATGATGTGGTGGAGGCATTTCGGCTTCTGGAAGTTGCAATGCAGCAATCTGCAATGGATACCAGAACTGGTAGTTATCCAAACAATCCCCTATACTCTATTGTATTCCTCCAAATAAACTATATATGACTAAATCCTTTTATCTTCACAGGAACTATTGACATGGATCTCATAACTACTGGTGTTTCGGCAAGCGAAAGGATGAGGCGAGAAAGTTTGGTTCAAGACACTCGCAACATGATCATGGAGAAGATGCAAATTGGGGGACGTTCCATGCGGTTATTGGAGGTATTACCATTCTTTCTAAAACATTTAGTATATATTATGTTCAGTTTGAGACAATGGTCCAATATAATTTAAAATAATCACGCAGATATTGGAAGAACTAAAGAATCAGAGCCCTGGCAGCGAAATTCATCTTAATGATGTAAGCCCTTACCTTTGAGATTATTTTTACCAGTGTTTATGCTTGCTCCATCCCTAAGGATAAGTGAACTAATGAGCTATTTCATGTTTAATGCAGCTAAGGAGTGCAGTTGCTACTCTCGCCAGCGAAGGATTTGTTTCCATGGCTGGTGACAGTGTAAAAAGAACATGA
Protein sequence

>MS.gene23323.t1

MASDSTPMDSNNGPSSPDNSNSSPIANTYSSPGRRRRRQSITPSGTPQPNRSRFASSDATPTPSRHRRGGGIPSSRRVPATPTSTSEDFPMSSEGGDGYDMDDAGPTYVWGTNISVEDVNDAIQRFLKHFREKSASQGGDDDLDMDLDIEGKYEKLIKQVIELEGESIDVDARDVFDHDHELYSKMVRYPLEVLAIFDMVLMNMVTRMNPMFEKHVQTRIFNLKSSTSMRNLNPSDIERMVSMKGMIIRCSSIIPEIREAIFRCLVCGFCSDPVPVERGRIAEPTVCLREECQSKNSMTLVHNRCKFTDKQIVRLQETPDEIPEGGTPHTVSLLLHDKLVDTGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTSKSRMLVEDAMEVDNGQGRNPEEVLFDEEKVAKLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEQTDRRLAKHIVSLHYKDYENMEQDVLDISTLTDYVSYARKHIHPQLSDEAADELITGYVKIRGRGKFSGSSKKVITATPRQIESLLRLSEALARIRFSESVEKHDVVEAFRLLEVAMQQSAMDTRTGTIDMDLITTGVSASERMRRESLVQDTRNMIMEKMQIGGRSMRLLEILEELKNQSPGSEIHLNDLRSAVATLASEGFVSMAGDSVKRT