Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07048.t1 | XP_003625966.1 | 98.4 | 489 | 8 | 0 | 1 | 489 | 1 | 489 | 7.20E-274 | 952.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07048.t1 | B8BMI1 | 84.3 | 489 | 75 | 2 | 3 | 489 | 6 | 494 | 7.1e-238 | 824.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07048.t1 | G7KST3 | 98.4 | 489 | 8 | 0 | 1 | 489 | 1 | 489 | 5.2e-274 | 952.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene07048 | 0.882789 | 7.76E-71 | -1.69E-46 |
| MS.gene049596 | MS.gene07048 | 0.828047 | 1.12E-54 | -1.69E-46 |
| MS.gene04985 | MS.gene07048 | 0.853151 | 2.89E-61 | -1.69E-46 |
| MS.gene049989 | MS.gene07048 | 0.914712 | 1.39E-84 | -1.69E-46 |
| MS.gene050297 | MS.gene07048 | 0.887004 | 2.09E-72 | -1.69E-46 |
| MS.gene050648 | MS.gene07048 | 0.861999 | 6.91E-64 | -1.69E-46 |
| MS.gene051087 | MS.gene07048 | 0.808703 | 2.72E-50 | -1.69E-46 |
| MS.gene051094 | MS.gene07048 | 0.845608 | 3.65E-59 | -1.69E-46 |
| MS.gene05124 | MS.gene07048 | 0.837768 | 4.28E-57 | -1.69E-46 |
| MS.gene051423 | MS.gene07048 | 0.814823 | 1.27E-51 | -1.69E-46 |
| MS.gene051629 | MS.gene07048 | 0.84449 | 7.32E-59 | -1.69E-46 |
| MS.gene051742 | MS.gene07048 | 0.839551 | 1.48E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene07048 | 0.806654 | 7.41E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene07048 | 0.817523 | 3.16E-52 | -1.69E-46 |
| MS.gene052308 | MS.gene07048 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene052367 | MS.gene07048 | 0.891387 | 4.16E-74 | -1.69E-46 |
| MS.gene053173 | MS.gene07048 | 0.84555 | 3.79E-59 | -1.69E-46 |
| MS.gene053348 | MS.gene07048 | 0.825554 | 4.40E-54 | -1.69E-46 |
| MS.gene053416 | MS.gene07048 | 0.906564 | 1.30E-80 | -1.69E-46 |
| MS.gene053417 | MS.gene07048 | 0.905621 | 3.54E-80 | -1.69E-46 |
| MS.gene05369 | MS.gene07048 | 0.848483 | 5.96E-60 | -1.69E-46 |
| MS.gene053929 | MS.gene07048 | 0.817035 | 4.06E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene07048 | 0.832501 | 9.12E-56 | -1.69E-46 |
| MS.gene054552 | MS.gene07048 | 0.80837 | 3.20E-50 | -1.69E-46 |
| MS.gene054593 | MS.gene07048 | 0.813629 | 2.32E-51 | -1.69E-46 |
| MS.gene054643 | MS.gene07048 | 0.812897 | 3.36E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene07048 | 0.82491 | 6.25E-54 | -1.69E-46 |
| MS.gene055411 | MS.gene07048 | 0.826508 | 2.61E-54 | -1.69E-46 |
| MS.gene055578 | MS.gene07048 | 0.832026 | 1.20E-55 | -1.69E-46 |
| MS.gene055957 | MS.gene07048 | 0.855314 | 6.86E-62 | -1.69E-46 |
| MS.gene056041 | MS.gene07048 | 0.881343 | 2.60E-70 | -1.69E-46 |
| MS.gene056042 | MS.gene07048 | 0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene05640 | MS.gene07048 | 0.849698 | 2.74E-60 | -1.69E-46 |
| MS.gene056520 | MS.gene07048 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene056526 | MS.gene07048 | 0.862335 | 5.45E-64 | -1.69E-46 |
| MS.gene057458 | MS.gene07048 | 0.825814 | 3.82E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene07048 | 0.826448 | 2.70E-54 | -1.69E-46 |
| MS.gene058196 | MS.gene07048 | 0.831736 | 1.41E-55 | -1.69E-46 |
| MS.gene058197 | MS.gene07048 | 0.827839 | 1.25E-54 | -1.69E-46 |
| MS.gene058198 | MS.gene07048 | 0.826104 | 3.26E-54 | -1.69E-46 |
| MS.gene058818 | MS.gene07048 | 0.862759 | 4.04E-64 | -1.69E-46 |
| MS.gene058827 | MS.gene07048 | 0.841185 | 5.54E-58 | -1.69E-46 |
| MS.gene058844 | MS.gene07048 | 0.815682 | 8.16E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene07048 | 0.874919 | 4.63E-68 | -1.69E-46 |
| MS.gene059553 | MS.gene07048 | 0.814265 | 1.68E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene07048 | 0.882901 | 7.06E-71 | -1.69E-46 |
| MS.gene060565 | MS.gene07048 | 0.877731 | 4.97E-69 | -1.69E-46 |
| MS.gene06057 | MS.gene07048 | 0.858781 | 6.51E-63 | -1.69E-46 |
| MS.gene06093 | MS.gene07048 | 0.857855 | 1.23E-62 | -1.69E-46 |
| MS.gene061099 | MS.gene07048 | 0.824137 | 9.50E-54 | -1.69E-46 |
| MS.gene061260 | MS.gene07048 | 0.899031 | 2.96E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07048.t1 | MTR_7g109480 | 98.364 | 489 | 8 | 0 | 1 | 489 | 1 | 489 | 0.0 | 1001 |
| MS.gene07048.t1 | MTR_4g096700 | 37.161 | 479 | 255 | 9 | 16 | 489 | 13 | 450 | 9.38e-86 | 280 |
| MS.gene07048.t1 | MTR_4g122270 | 40.884 | 362 | 200 | 2 | 131 | 487 | 304 | 656 | 2.57e-84 | 279 |
| MS.gene07048.t1 | MTR_8g090000 | 39.175 | 388 | 189 | 6 | 145 | 488 | 119 | 503 | 8.45e-84 | 276 |
| MS.gene07048.t1 | MTR_2g437540 | 37.371 | 388 | 196 | 5 | 145 | 488 | 121 | 505 | 7.50e-80 | 265 |
| MS.gene07048.t1 | MTR_4g071090 | 42.077 | 366 | 186 | 7 | 144 | 488 | 230 | 590 | 1.25e-79 | 265 |
| MS.gene07048.t1 | MTR_4g116870 | 34.151 | 489 | 265 | 9 | 16 | 487 | 40 | 488 | 2.55e-74 | 248 |
| MS.gene07048.t1 | MTR_7g100680 | 36.193 | 373 | 202 | 10 | 145 | 487 | 143 | 509 | 6.37e-62 | 216 |
| MS.gene07048.t1 | MTR_2g009190 | 34.225 | 374 | 222 | 10 | 131 | 487 | 98 | 464 | 4.68e-52 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07048.t1 | AT4G02060 | 82.305 | 486 | 86 | 0 | 4 | 489 | 2 | 487 | 0.0 | 851 |
| MS.gene07048.t1 | AT4G02060 | 82.305 | 486 | 86 | 0 | 4 | 489 | 2 | 487 | 0.0 | 851 |
| MS.gene07048.t1 | AT1G44900 | 35.833 | 480 | 256 | 6 | 16 | 487 | 223 | 658 | 1.01e-87 | 288 |
| MS.gene07048.t1 | AT1G44900 | 35.833 | 480 | 256 | 6 | 16 | 487 | 221 | 656 | 1.13e-87 | 288 |
| MS.gene07048.t1 | AT5G44635 | 37.562 | 402 | 199 | 9 | 134 | 487 | 107 | 504 | 8.71e-84 | 276 |
| MS.gene07048.t1 | AT5G44635 | 37.562 | 402 | 199 | 9 | 134 | 487 | 107 | 504 | 1.59e-83 | 276 |
| MS.gene07048.t1 | AT5G46280 | 38.652 | 445 | 228 | 8 | 53 | 489 | 39 | 446 | 6.76e-83 | 267 |
| MS.gene07048.t1 | AT5G46280 | 38.652 | 445 | 228 | 8 | 53 | 489 | 39 | 446 | 2.05e-82 | 267 |
| MS.gene07048.t1 | AT5G46280 | 38.652 | 445 | 228 | 8 | 53 | 489 | 39 | 446 | 6.49e-82 | 268 |
| MS.gene07048.t1 | AT5G46280 | 38.652 | 445 | 228 | 8 | 53 | 489 | 39 | 446 | 2.01e-81 | 268 |
| MS.gene07048.t1 | AT2G16440 | 39.481 | 385 | 207 | 6 | 126 | 488 | 215 | 595 | 2.82e-78 | 261 |
| MS.gene07048.t1 | AT2G07690 | 35.197 | 483 | 268 | 9 | 16 | 487 | 36 | 484 | 4.23e-76 | 253 |
| MS.gene07048.t1 | AT2G07690 | 34.990 | 483 | 267 | 10 | 16 | 487 | 36 | 482 | 6.89e-74 | 247 |
| MS.gene07048.t1 | AT3G09660 | 35.733 | 375 | 203 | 11 | 144 | 487 | 144 | 511 | 1.83e-62 | 217 |
| MS.gene07048.t1 | AT3G09660 | 35.733 | 375 | 203 | 11 | 144 | 487 | 144 | 511 | 4.47e-62 | 217 |
| MS.gene07048.t1 | AT3G09660 | 35.733 | 375 | 203 | 11 | 144 | 487 | 144 | 511 | 4.92e-62 | 216 |
| MS.gene07048.t1 | AT2G14050 | 35.450 | 378 | 219 | 10 | 127 | 487 | 96 | 465 | 3.80e-52 | 187 |
| MS.gene07048.t1 | AT2G14050 | 35.450 | 378 | 219 | 10 | 127 | 487 | 96 | 465 | 5.21e-52 | 187 |
Find 113 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAATTTCGCCGACGTTAA+TGG | 0.138934 | 7.1:+4705779 | MS.gene07048:CDS |
| TACAAGAAGCGTCTGATTTC+AGG | 0.187899 | 7.1:-4706274 | None:intergenic |
| GAACAATGACTGTTCATCTT+AGG | 0.235202 | 7.1:+4707652 | MS.gene07048:CDS |
| AACCAGGATGAGGAGGTATT+TGG | 0.259137 | 7.1:-4705807 | None:intergenic |
| TGTCATAGATATGAACTTAT+AGG | 0.264477 | 7.1:+4708326 | MS.gene07048:intron |
| AAGGACGGCCATTTACAATT+AGG | 0.267172 | 7.1:+4706801 | MS.gene07048:CDS |
| ATTTCAGGTGCTATCAGATA+TGG | 0.292472 | 7.1:+4709194 | MS.gene07048:intron |
| GAGAATACTCGAAGGTATAT+TGG | 0.301897 | 7.1:+4706109 | MS.gene07048:CDS |
| TTCATAACACAGCGCTTTGA+TGG | 0.308689 | 7.1:-4707243 | None:intergenic |
| GGACAGCAGTCCTTGCATTC+AGG | 0.312728 | 7.1:-4709329 | None:intergenic |
| TGATTTCAGGAGGCATCTTC+TGG | 0.316704 | 7.1:-4706261 | None:intergenic |
| TTCACCTCCCTAATTGTAAA+TGG | 0.321234 | 7.1:-4706809 | None:intergenic |
| GGTGACGTCGTCGAACTCTC+TGG | 0.351357 | 7.1:+4707950 | MS.gene07048:CDS |
| AGGACGGCCATTTACAATTA+GGG | 0.362830 | 7.1:+4706802 | MS.gene07048:CDS |
| AGGTTAGGGTTTACCTTTGT+CGG | 0.368203 | 7.1:-4705668 | None:intergenic |
| GCACTGCTGCTGCTTCTTGT+TGG | 0.371058 | 7.1:+4708455 | MS.gene07048:CDS |
| CAAACATTGGTCAGCTAGTA+AGG | 0.381899 | 7.1:+4706837 | MS.gene07048:CDS |
| ATCGACGCCTTTGGTGTTCA+TGG | 0.398257 | 7.1:-4705638 | None:intergenic |
| GAGGTCAATTTCGACAGATC+TGG | 0.405624 | 7.1:-4705931 | None:intergenic |
| GCCAGTGGTGTACACACCCC+TGG | 0.412271 | 7.1:-4708845 | None:intergenic |
| CTAAAACCGACGTAAGGTAT+AGG | 0.418413 | 7.1:-4707983 | None:intergenic |
| AACAATGACTGTTCATCTTA+GGG | 0.427359 | 7.1:+4707653 | MS.gene07048:CDS |
| AGAATACTCGAAGGTATATT+GGG | 0.427707 | 7.1:+4706110 | MS.gene07048:CDS |
| ACTGTTAGCATTGCCAAGGC+TGG | 0.441630 | 7.1:+4709294 | MS.gene07048:CDS |
| AGTTGCTGACACATACTTAG+AGG | 0.452299 | 7.1:+4708024 | MS.gene07048:CDS |
| GAAATTTGTAAGAAATTCTC+TGG | 0.454128 | 7.1:-4705765 | None:intergenic |
| GACAGCAGTCCTTGCATTCA+GGG | 0.456047 | 7.1:-4709328 | None:intergenic |
| AGATCTACATATATGTTTGA+TGG | 0.458956 | 7.1:+4708768 | MS.gene07048:CDS |
| CTGTGTTATGAACAAGAGTA+AGG | 0.463072 | 7.1:+4707254 | MS.gene07048:CDS |
| TACATCTATACATGAAGTTA+TGG | 0.464691 | 7.1:+4709263 | MS.gene07048:CDS |
| ACAAATGTCTCGGTCGGCTC+CGG | 0.470021 | 7.1:-4706163 | None:intergenic |
| GTTCGTGGAATGTGACCCTT+TGG | 0.471486 | 7.1:-4707633 | None:intergenic |
| TACACAGCCACCTGCATCAA+TGG | 0.474370 | 7.1:-4706896 | None:intergenic |
| CCCCATCGGACATTGAAAGA+TGG | 0.483439 | 7.1:+4708482 | MS.gene07048:CDS |
| TTACATTAATCAAGTCTTCG+AGG | 0.483492 | 7.1:-4705950 | None:intergenic |
| TTCTTGTTGGTGCTCCCCAT+CGG | 0.486588 | 7.1:+4708468 | MS.gene07048:CDS |
| GGTGTTGAAATCGACGCCTT+TGG | 0.493427 | 7.1:-4705647 | None:intergenic |
| GAGAGTTCGACGACGTCACC+TGG | 0.499173 | 7.1:-4707947 | None:intergenic |
| AGCTGACTCTTGGCAACACC+AGG | 0.505526 | 7.1:-4708796 | None:intergenic |
| CTAAGTATGTGTCAGCAACT+AGG | 0.506284 | 7.1:-4708021 | None:intergenic |
| TGAATTTATCAGGTAACTCC+AGG | 0.509977 | 7.1:+4707929 | MS.gene07048:intron |
| AGATGAACAGTCATTGTTCG+TGG | 0.511338 | 7.1:-4707648 | None:intergenic |
| CCCATCGGACATTGAAAGAT+GGG | 0.514610 | 7.1:+4708483 | MS.gene07048:CDS |
| GTGACGTCGTCGAACTCTCT+GGG | 0.514966 | 7.1:+4707951 | MS.gene07048:CDS |
| TCCCATCTTTCAATGTCCGA+TGG | 0.520920 | 7.1:-4708484 | None:intergenic |
| TTTCAGGTGCTATCAGATAT+GGG | 0.522521 | 7.1:+4709195 | MS.gene07048:intron |
| GATCTACATATATGTTTGAT+GGG | 0.522576 | 7.1:+4708769 | MS.gene07048:CDS |
| ATTTACAATTAGGGAGGTGA+AGG | 0.529897 | 7.1:+4706811 | MS.gene07048:CDS |
| GGTCAGCTAGTAAGGATAGC+TGG | 0.531135 | 7.1:+4706845 | MS.gene07048:CDS |
| CATCTTGTCAAACTCATCAA+TGG | 0.531379 | 7.1:-4709226 | None:intergenic |
| CCCATCTTTCAATGTCCGAT+GGG | 0.532907 | 7.1:-4708483 | None:intergenic |
| ATATGTTTGATGGGTGATCC+TGG | 0.533799 | 7.1:+4708778 | MS.gene07048:CDS |
| TTTGATGGACACTCAAACAA+AGG | 0.537065 | 7.1:-4707228 | None:intergenic |
| GGCAAAGGAAGTAGTGGAGT+TGG | 0.537178 | 7.1:+4708865 | MS.gene07048:CDS |
| AGCCAAATACCTCCTCATCC+TGG | 0.538989 | 7.1:+4705805 | MS.gene07048:CDS |
| CCCAGGGGTGTGTACACCAC+TGG | 0.541463 | 7.1:+4708844 | MS.gene07048:CDS |
| GGATGTAGTGATCCCAGCCT+TGG | 0.542820 | 7.1:-4709307 | None:intergenic |
| GAAAAGAATTAATACCATGC+TGG | 0.543239 | 7.1:-4709366 | None:intergenic |
| GACATTGAAAGATGGGATGA+AGG | 0.546378 | 7.1:+4708490 | MS.gene07048:CDS |
| TTCAAAGCCGCAATCCTCAC+AGG | 0.550141 | 7.1:-4706921 | None:intergenic |
| TGCAATCGACGAACTAATGC+CGG | 0.550355 | 7.1:+4706144 | MS.gene07048:CDS |
| TAGGGGAGAACTCACGAGAA+AGG | 0.550825 | 7.1:+4707671 | MS.gene07048:CDS |
| AGATGTCAAACCATTGATGC+AGG | 0.551344 | 7.1:+4706886 | MS.gene07048:CDS |
| CTGTTAGCATTGCCAAGGCT+GGG | 0.552460 | 7.1:+4709295 | MS.gene07048:CDS |
| CATAATTAATGTAGCACCCA+GGG | 0.553696 | 7.1:+4708828 | MS.gene07048:CDS |
| ATCAAACGTTTAGCAGAAGA+TGG | 0.554323 | 7.1:+4708365 | MS.gene07048:CDS |
| TCCACTACTTCCTTTGCCAG+TGG | 0.563040 | 7.1:-4708860 | None:intergenic |
| CATTGATGAGTTTGACAAGA+TGG | 0.565852 | 7.1:+4709227 | MS.gene07048:CDS |
| ATATGAACTTATAGGAGATG+AGG | 0.567667 | 7.1:+4708334 | MS.gene07048:CDS |
| CCAGTGGTGTACACACCCCT+GGG | 0.568328 | 7.1:-4708844 | None:intergenic |
| AAAACCATCTCATTTGTCAC+CGG | 0.573814 | 7.1:-4708913 | None:intergenic |
| GAGGTGAAGGCTTCAAACAT+TGG | 0.576964 | 7.1:+4706824 | MS.gene07048:CDS |
| TACATCAAAGCATCTTCGAA+AGG | 0.578814 | 7.1:+4706782 | MS.gene07048:CDS |
| GGTGTGTACACCACTGGCAA+AGG | 0.579798 | 7.1:+4708850 | MS.gene07048:CDS |
| ACCACTGGCAAAGGAAGTAG+TGG | 0.580320 | 7.1:+4708859 | MS.gene07048:CDS |
| ACTTTGACGCTCTCAGCTGA+AGG | 0.580883 | 7.1:-4707287 | None:intergenic |
| TCACTACATCCCTGAATGCA+AGG | 0.581363 | 7.1:+4709319 | MS.gene07048:CDS |
| ATGACTCAGAGATCTGATGA+AGG | 0.584777 | 7.1:+4706208 | MS.gene07048:CDS |
| GTCGATTTCAACACCGACAA+AGG | 0.585963 | 7.1:+4705655 | MS.gene07048:CDS |
| AGATCTGATGAAGGAACTGA+AGG | 0.591585 | 7.1:+4706217 | MS.gene07048:CDS |
| TTTCTTCCTATACCTTACGT+CGG | 0.593220 | 7.1:+4707977 | MS.gene07048:CDS |
| AAAAGTAACTAACCAGGATG+AGG | 0.593799 | 7.1:-4705817 | None:intergenic |
| TTGCGGCTTTGAAATCTACC+AGG | 0.594563 | 7.1:+4706931 | MS.gene07048:CDS |
| GTCATCATCGACAAATGTCT+CGG | 0.595656 | 7.1:-4706173 | None:intergenic |
| GTTAGCTGAACATGTTCCAA+AGG | 0.596209 | 7.1:+4707617 | MS.gene07048:CDS |
| TTAGCTGAACATGTTCCAAA+GGG | 0.599197 | 7.1:+4707618 | MS.gene07048:CDS |
| CTTAAAATGAGTCACAGACA+TGG | 0.605877 | 7.1:-4708047 | None:intergenic |
| TCATCGACAAATGTCTCGGT+CGG | 0.606703 | 7.1:-4706169 | None:intergenic |
| TCAGGAGGCATCTTCTGGTG+CGG | 0.606727 | 7.1:-4706256 | None:intergenic |
| AGATCCGGTGACAAATGAGA+TGG | 0.608033 | 7.1:+4708909 | MS.gene07048:CDS |
| TCAAAGCATCTTCGAAAGGA+CGG | 0.610988 | 7.1:+4706786 | MS.gene07048:CDS |
| GAAGGAACTGAAGGTGCTGA+TGG | 0.613337 | 7.1:+4706226 | MS.gene07048:CDS |
| TCTGAGTCATCAAAATGTCA+TGG | 0.613747 | 7.1:-4706195 | None:intergenic |
| AGTAACTAACCAGGATGAGG+AGG | 0.621477 | 7.1:-4705814 | None:intergenic |
| TCAGTACAAAGATCTAGATG+AGG | 0.630593 | 7.1:+4706066 | MS.gene07048:intron |
| TTTGGCTTCGCCATTAACGT+CGG | 0.637918 | 7.1:-4705789 | None:intergenic |
| AAGAAGCGTCTGATTTCAGG+AGG | 0.642475 | 7.1:-4706271 | None:intergenic |
| ACATAATTAATGTAGCACCC+AGG | 0.646644 | 7.1:+4708827 | MS.gene07048:CDS |
| ATGCTGGATTAGCTGCAGCA+AGG | 0.647938 | 7.1:-4709350 | None:intergenic |
| ACAGACTGTTAGCATTGCCA+AGG | 0.648057 | 7.1:+4709290 | MS.gene07048:CDS |
| ATTGCTCTAAAACCGACGTA+AGG | 0.649820 | 7.1:-4707989 | None:intergenic |
| TGTGTTATGAACAAGAGTAA+GGG | 0.651464 | 7.1:+4707255 | MS.gene07048:CDS |
| ACAATGACTGTTCATCTTAG+GGG | 0.651727 | 7.1:+4707654 | MS.gene07048:CDS |
| TTGCTGCAGCTAATCCAGCA+TGG | 0.653882 | 7.1:+4709352 | MS.gene07048:CDS |
| ATTTCAACCATGAACACCAA+AGG | 0.655016 | 7.1:+4705631 | None:intergenic |
| GTGTACACCTGTGAGGATTG+CGG | 0.657613 | 7.1:+4706914 | MS.gene07048:CDS |
| ACGGCCATTTACAATTAGGG+AGG | 0.673164 | 7.1:+4706805 | MS.gene07048:CDS |
| CCATCTTTCAATGTCCGATG+GGG | 0.682038 | 7.1:-4708482 | None:intergenic |
| TTCGAGTATTCTCAGTAACA+CGG | 0.691041 | 7.1:-4706099 | None:intergenic |
| GGTGGCTGTGTACACCTGTG+AGG | 0.703311 | 7.1:+4706907 | MS.gene07048:CDS |
| TGTCAAACCATTGATGCAGG+TGG | 0.707923 | 7.1:+4706889 | MS.gene07048:CDS |
| ATAATTAATGTAGCACCCAG+GGG | 0.730314 | 7.1:+4708829 | MS.gene07048:CDS |
| GTGTTACTGAGAATACTCGA+AGG | 0.737251 | 7.1:+4706101 | MS.gene07048:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTATTTTTTATTT+AGG | + | chr7.1:4706700-4706719 | MS.gene07048:intron | 0.0% |
| !! | TTAAAAAAAAAAACGAATTA+GGG | - | chr7.1:4705864-4705883 | None:intergenic | 10.0% |
| !! | TTGATATTATTAAATTAGTT+TGG | + | chr7.1:4708271-4708290 | MS.gene07048:intron | 10.0% |
| !!! | TGATATTATTAAATTAGTTT+GGG | + | chr7.1:4708272-4708291 | MS.gene07048:intron | 10.0% |
| !! | AAATAAATAAAAAAACACCT+AGG | - | chr7.1:4706693-4706712 | None:intergenic | 15.0% |
| !! | AATAAATAAAAAAACACCTA+GGG | - | chr7.1:4706692-4706711 | None:intergenic | 15.0% |
| !! | GTTAAAAAAAAAAACGAATT+AGG | - | chr7.1:4705865-4705884 | None:intergenic | 15.0% |
| !! | TGGAATAATGAATATTTATA+CGG | + | chr7.1:4707569-4707588 | MS.gene07048:intron | 15.0% |
| !! | TTGAAAAATCAAGAAAAAAT+AGG | + | chr7.1:4709019-4709038 | MS.gene07048:intron | 15.0% |
| !!! | AATAGTGATTTTGAATTATT+AGG | + | chr7.1:4708572-4708591 | MS.gene07048:intron | 15.0% |
| !!! | ATAGTGATTTTGAATTATTA+GGG | + | chr7.1:4708573-4708592 | MS.gene07048:intron | 15.0% |
| !!! | ATATTATTAAATTAGTTTGG+GGG | + | chr7.1:4708274-4708293 | MS.gene07048:intron | 15.0% |
| !!! | CAATTGCTTATTTATTTTTT+TGG | + | chr7.1:4707399-4707418 | MS.gene07048:intron | 15.0% |
| !!! | GATATTATTAAATTAGTTTG+GGG | + | chr7.1:4708273-4708292 | MS.gene07048:intron | 15.0% |
| !! | AACAAAGTTAAAAATCTTTG+GGG | - | chr7.1:4707162-4707181 | None:intergenic | 20.0% |
| !! | AAGGAATTACATATTAACTA+AGG | + | chr7.1:4708514-4708533 | MS.gene07048:intron | 20.0% |
| !! | AATAGAAATAGTTTATACAC+AGG | - | chr7.1:4706473-4706492 | None:intergenic | 20.0% |
| !! | ACAACAAAGTTAAAAATCTT+TGG | - | chr7.1:4707164-4707183 | None:intergenic | 20.0% |
| !! | ATGAAATGAAAACAATTGAA+AGG | - | chr7.1:4705698-4705717 | None:intergenic | 20.0% |
| !! | ATTTATTTAGATGCACAATA+AGG | + | chr7.1:4706977-4706996 | MS.gene07048:intron | 20.0% |
| !! | CAACAAAGTTAAAAATCTTT+GGG | - | chr7.1:4707163-4707182 | None:intergenic | 20.0% |
| !! | CAAGAAGAAAATCAAATAAA+AGG | - | chr7.1:4708174-4708193 | None:intergenic | 20.0% |
| !! | TCCAAAAAAAAAATCTAACA+GGG | - | chr7.1:4707106-4707125 | None:intergenic | 20.0% |
| !! | TTGTTTATTGTGAATTTATC+AGG | + | chr7.1:4707919-4707938 | MS.gene07048:intron | 20.0% |
| !!! | AAAGTTTTTAAGATTTCAAG+AGG | + | chr7.1:4707305-4707324 | MS.gene07048:CDS | 20.0% |
| !!! | AATAAGGTTTAAAATGGAAA+TGG | + | chr7.1:4706993-4707012 | MS.gene07048:intron | 20.0% |
| !!! | CTTTTATTTGATTTTCTTCT+TGG | + | chr7.1:4708172-4708191 | MS.gene07048:intron | 20.0% |
| !!! | TATTGTTAGTTTAATGCAAT+TGG | - | chr7.1:4707711-4707730 | None:intergenic | 20.0% |
| !!! | TATTTTTTCTCTCTTTGTTT+TGG | + | chr7.1:4707127-4707146 | MS.gene07048:intron | 20.0% |
| !!! | TTTATTTAGGTTGTATATGA+CGG | + | chr7.1:4706713-4706732 | MS.gene07048:intron | 20.0% |
| ! | AAAAAAACGAATTAGGGTTA+AGG | - | chr7.1:4705858-4705877 | None:intergenic | 25.0% |
| ! | AAGATTTAACAGAAAGTTTG+AGG | - | chr7.1:4708659-4708678 | None:intergenic | 25.0% |
| ! | AATAAACTGTTTATCTAGAC+AGG | - | chr7.1:4706410-4706429 | None:intergenic | 25.0% |
| ! | AATATCAATTAGTGTCTAGT+AGG | - | chr7.1:4708259-4708278 | None:intergenic | 25.0% |
| ! | ACAAGAAACTACTAGTTAAA+AGG | - | chr7.1:4709144-4709163 | None:intergenic | 25.0% |
| ! | AGATAAACAGTTTATTTGCT+TGG | + | chr7.1:4706414-4706433 | MS.gene07048:intron | 25.0% |
| ! | AGATCTACATATATGTTTGA+TGG | + | chr7.1:4708768-4708787 | MS.gene07048:CDS | 25.0% |
| ! | AGATTTAACAGAAAGTTTGA+GGG | - | chr7.1:4708658-4708677 | None:intergenic | 25.0% |
| ! | AGTATAACATAAGCACAAAA+TGG | - | chr7.1:4708994-4709013 | None:intergenic | 25.0% |
| ! | AGTTATCTCATGAAATACAA+AGG | + | chr7.1:4707822-4707841 | MS.gene07048:intron | 25.0% |
| ! | ATAAACTGTTTATCTAGACA+GGG | - | chr7.1:4706409-4706428 | None:intergenic | 25.0% |
| ! | ATATTGCATATTATATGCAG+GGG | - | chr7.1:4707498-4707517 | None:intergenic | 25.0% |
| ! | ATGCACAATAAGGTTTAAAA+TGG | + | chr7.1:4706987-4707006 | MS.gene07048:intron | 25.0% |
| ! | GAAATTTGTAAGAAATTCTC+TGG | - | chr7.1:4705768-4705787 | None:intergenic | 25.0% |
| ! | GACAAAACATTCTAAATTTC+AGG | + | chr7.1:4709179-4709198 | MS.gene07048:intron | 25.0% |
| ! | GATATTGCATATTATATGCA+GGG | - | chr7.1:4707499-4707518 | None:intergenic | 25.0% |
| ! | GATCTACATATATGTTTGAT+GGG | + | chr7.1:4708769-4708788 | MS.gene07048:CDS | 25.0% |
| ! | GTCCAAAAAAAAAATCTAAC+AGG | - | chr7.1:4707107-4707126 | None:intergenic | 25.0% |
| ! | TACATCTATACATGAAGTTA+TGG | + | chr7.1:4709263-4709282 | MS.gene07048:CDS | 25.0% |
| ! | TAGAGTAATAAAGCATGTAT+CGG | - | chr7.1:4707370-4707389 | None:intergenic | 25.0% |
| ! | TATTTATACGGTTAAATTGC+AGG | + | chr7.1:4707581-4707600 | MS.gene07048:intron | 25.0% |
| ! | TGAAGACATGTCAATAATAA+AGG | - | chr7.1:4707787-4707806 | None:intergenic | 25.0% |
| ! | TGCTATTATGAAAGAAATCA+GGG | - | chr7.1:4706360-4706379 | None:intergenic | 25.0% |
| ! | TGTCATAGATATGAACTTAT+AGG | + | chr7.1:4708326-4708345 | MS.gene07048:intron | 25.0% |
| ! | TGTTAAATCTTTACTGTGTT+TGG | + | chr7.1:4708668-4708687 | MS.gene07048:intron | 25.0% |
| !! | AAAACAACTTATAGCTTGTA+CGG | - | chr7.1:4706525-4706544 | None:intergenic | 25.0% |
| !! | TTGCTATTATGAAAGAAATC+AGG | - | chr7.1:4706361-4706380 | None:intergenic | 25.0% |
| !! | TTGTAGTGTTGTATGTTTTT+AGG | + | chr7.1:4706382-4706401 | MS.gene07048:intron | 25.0% |
| !!! | ACCCTGTTAGATTTTTTTTT+TGG | + | chr7.1:4707102-4707121 | MS.gene07048:intron | 25.0% |
| !!! | TTCTTTTAATTGCAGATTAG+AGG | + | chr7.1:4708745-4708764 | MS.gene07048:intron | 25.0% |
| AAACAGTCTCACAAAACTTA+TGG | + | chr7.1:4706631-4706650 | MS.gene07048:intron | 30.0% | |
| AACAATGACTGTTCATCTTA+GGG | + | chr7.1:4707653-4707672 | MS.gene07048:CDS | 30.0% | |
| AAGTGGGGTGAAAAAATAAA+GGG | - | chr7.1:4708128-4708147 | None:intergenic | 30.0% | |
| AATTGAAAGGATGAAGGTTA+GGG | - | chr7.1:4705685-4705704 | None:intergenic | 30.0% | |
| AATTTAATTGTGGAGAAGTG+GGG | + | chr7.1:4707451-4707470 | MS.gene07048:intron | 30.0% | |
| ACAATTTAATTGTGGAGAAG+TGG | + | chr7.1:4707449-4707468 | MS.gene07048:intron | 30.0% | |
| ATAACCCACAATGTAACATT+AGG | - | chr7.1:4706740-4706759 | None:intergenic | 30.0% | |
| ATATGAACTTATAGGAGATG+AGG | + | chr7.1:4708334-4708353 | MS.gene07048:CDS | 30.0% | |
| ATTAGGGTTAAGGTTTGAAT+CGG | - | chr7.1:4705848-4705867 | None:intergenic | 30.0% | |
| CAAAACATATGATATTCTGC+CGG | + | chr7.1:4709042-4709061 | MS.gene07048:intron | 30.0% | |
| CAATTTAATTGTGGAGAAGT+GGG | + | chr7.1:4707450-4707469 | MS.gene07048:intron | 30.0% | |
| CAGTACTTATATGAATTACC+TGG | - | chr7.1:4706952-4706971 | None:intergenic | 30.0% | |
| GAAAACAATTGAAAGGATGA+AGG | - | chr7.1:4705691-4705710 | None:intergenic | 30.0% | |
| GAAACGAAAGTGAAGAAAAA+AGG | - | chr7.1:4705887-4705906 | None:intergenic | 30.0% | |
| GAATGAAAAAGTAACTAACC+AGG | - | chr7.1:4705826-4705845 | None:intergenic | 30.0% | |
| GCACAATTGCTTATTAACTA+TGG | + | chr7.1:4707549-4707568 | MS.gene07048:intron | 30.0% | |
| GGATATTGCATATTATATGC+AGG | - | chr7.1:4707500-4707519 | None:intergenic | 30.0% | |
| TAACATAAGCACAAAATGGA+TGG | - | chr7.1:4708990-4709009 | None:intergenic | 30.0% | |
| TATACCTGAAAGAGAAAAAG+AGG | - | chr7.1:4705744-4705763 | None:intergenic | 30.0% | |
| TCTTCATGTCCAAAAATTTC+AGG | - | chr7.1:4708425-4708444 | None:intergenic | 30.0% | |
| TGTACCTATTGAAGTTTAAC+TGG | + | chr7.1:4707870-4707889 | MS.gene07048:intron | 30.0% | |
| TGTGTTATGAACAAGAGTAA+GGG | + | chr7.1:4707255-4707274 | MS.gene07048:CDS | 30.0% | |
| TTACATTAATCAAGTCTTCG+AGG | - | chr7.1:4705953-4705972 | None:intergenic | 30.0% | |
| TTAGCCAGTTAAACTTCAAT+AGG | - | chr7.1:4707877-4707896 | None:intergenic | 30.0% | |
| TTAGTTTAATGCAATTGGCA+GGG | - | chr7.1:4707706-4707725 | None:intergenic | 30.0% | |
| ! | AAATCCTCTTTTTCTCTTTC+AGG | + | chr7.1:4705737-4705756 | MS.gene07048:intron | 30.0% |
| ! | AACATTGTTGATTAACATCC+TGG | - | chr7.1:4707046-4707065 | None:intergenic | 30.0% |
| ! | AAGGTTTAAAATGGAAATGG+AGG | + | chr7.1:4706996-4707015 | MS.gene07048:intron | 30.0% |
| ! | AGAATACTCGAAGGTATATT+GGG | + | chr7.1:4706110-4706129 | MS.gene07048:CDS | 30.0% |
| ! | AGGTTTAAAATGGAAATGGA+GGG | + | chr7.1:4706997-4707016 | MS.gene07048:intron | 30.0% |
| ! | TCATTAGCTCCTGAAATTTT+TGG | + | chr7.1:4708413-4708432 | MS.gene07048:CDS | 30.0% |
| !! | AGTTCTTCATAAGCTGATTT+TGG | - | chr7.1:4706581-4706600 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr7.1:4706632-4706651 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr7.1:4706631-4706650 | None:intergenic | 30.0% |
| !!! | ACAAATGAGATGGTTTTAGA+GGG | + | chr7.1:4708919-4708938 | MS.gene07048:CDS | 30.0% |
| !!! | TGCTTTTTTATTTTGTTGCC+AGG | + | chr7.1:4707025-4707044 | MS.gene07048:intron | 30.0% |
| AAAACCATCTCATTTGTCAC+CGG | - | chr7.1:4708916-4708935 | None:intergenic | 35.0% | |
| AAAAGTAACTAACCAGGATG+AGG | - | chr7.1:4705820-4705839 | None:intergenic | 35.0% | |
| ACAATGACTGTTCATCTTAG+GGG | + | chr7.1:4707654-4707673 | MS.gene07048:CDS | 35.0% | |
| ACATAATTAATGTAGCACCC+AGG | + | chr7.1:4708827-4708846 | MS.gene07048:CDS | 35.0% | |
| AGTGGGGTGAAAAAATAAAG+GGG | - | chr7.1:4708127-4708146 | None:intergenic | 35.0% | |
| ATAAGCACAAAATGGATGGA+AGG | - | chr7.1:4708986-4709005 | None:intergenic | 35.0% | |
| ATAATTAATGTAGCACCCAG+GGG | + | chr7.1:4708829-4708848 | MS.gene07048:CDS | 35.0% | |
| ATCAAACGTTTAGCAGAAGA+TGG | + | chr7.1:4708365-4708384 | MS.gene07048:CDS | 35.0% | |
| ATTGAGAGCTAAGCAGAAAA+TGG | - | chr7.1:4706305-4706324 | None:intergenic | 35.0% | |
| ATTTACAATTAGGGAGGTGA+AGG | + | chr7.1:4706811-4706830 | MS.gene07048:CDS | 35.0% | |
| CAATTGAAAGGATGAAGGTT+AGG | - | chr7.1:4705686-4705705 | None:intergenic | 35.0% | |
| CATAATTAATGTAGCACCCA+GGG | + | chr7.1:4708828-4708847 | MS.gene07048:CDS | 35.0% | |
| CATCTTGTCAAACTCATCAA+TGG | - | chr7.1:4709229-4709248 | None:intergenic | 35.0% | |
| CATTGATGAGTTTGACAAGA+TGG | + | chr7.1:4709227-4709246 | MS.gene07048:CDS | 35.0% | |
| CTGTGTTATGAACAAGAGTA+AGG | + | chr7.1:4707254-4707273 | MS.gene07048:CDS | 35.0% | |
| CTTAAAATGAGTCACAGACA+TGG | - | chr7.1:4708050-4708069 | None:intergenic | 35.0% | |
| GAACAATGACTGTTCATCTT+AGG | + | chr7.1:4707652-4707671 | MS.gene07048:CDS | 35.0% | |
| GAAGTGGGGTGAAAAAATAA+AGG | - | chr7.1:4708129-4708148 | None:intergenic | 35.0% | |
| GAGCTCACACAATTTAATTG+TGG | + | chr7.1:4707441-4707460 | MS.gene07048:intron | 35.0% | |
| GGCATGTGCAAAATGAAATT+GGG | + | chr7.1:4709063-4709082 | MS.gene07048:intron | 35.0% | |
| TCAGTACAAAGATCTAGATG+AGG | + | chr7.1:4706066-4706085 | MS.gene07048:intron | 35.0% | |
| TCTGAGTCATCAAAATGTCA+TGG | - | chr7.1:4706198-4706217 | None:intergenic | 35.0% | |
| TGAATTTATCAGGTAACTCC+AGG | + | chr7.1:4707929-4707948 | MS.gene07048:intron | 35.0% | |
| TTAGCTGAACATGTTCCAAA+GGG | + | chr7.1:4707618-4707637 | MS.gene07048:CDS | 35.0% | |
| TTCACCTCCCTAATTGTAAA+TGG | - | chr7.1:4706812-4706831 | None:intergenic | 35.0% | |
| TTCGAGTATTCTCAGTAACA+CGG | - | chr7.1:4706102-4706121 | None:intergenic | 35.0% | |
| TTTCTTCCTATACCTTACGT+CGG | + | chr7.1:4707977-4707996 | MS.gene07048:CDS | 35.0% | |
| ! | AAAAACACCTAGGGTTTGTT+TGG | - | chr7.1:4706683-4706702 | None:intergenic | 35.0% |
| ! | ATTTCAGGTGCTATCAGATA+TGG | + | chr7.1:4709194-4709213 | MS.gene07048:intron | 35.0% |
| ! | CAATTTCATTTTGCACATGC+CGG | - | chr7.1:4709064-4709083 | None:intergenic | 35.0% |
| ! | GAGAATACTCGAAGGTATAT+TGG | + | chr7.1:4706109-4706128 | MS.gene07048:CDS | 35.0% |
| ! | GTTAGTTTAATGCAATTGGC+AGG | - | chr7.1:4707707-4707726 | None:intergenic | 35.0% |
| ! | TACATCAAAGCATCTTCGAA+AGG | + | chr7.1:4706782-4706801 | MS.gene07048:CDS | 35.0% |
| ! | TTTCAGGTGCTATCAGATAT+GGG | + | chr7.1:4709195-4709214 | MS.gene07048:intron | 35.0% |
| ! | TTTGATGGACACTCAAACAA+AGG | - | chr7.1:4707231-4707250 | None:intergenic | 35.0% |
| !! | GTTGTTTTCATAAGCAATCC+TGG | + | chr7.1:4706537-4706556 | MS.gene07048:intron | 35.0% |
| !! | TAGCTGTTACTTCCTGTTTT+TGG | - | chr7.1:4707197-4707216 | None:intergenic | 35.0% |
| !!! | GACAAATGAGATGGTTTTAG+AGG | + | chr7.1:4708918-4708937 | MS.gene07048:CDS | 35.0% |
| !!! | TGTTACTTCCTGTTTTTGGA+GGG | - | chr7.1:4707193-4707212 | None:intergenic | 35.0% |
| AACCAATCCAAACAAACCCT+AGG | + | chr7.1:4706673-4706692 | MS.gene07048:intron | 40.0% | |
| AAGGACGGCCATTTACAATT+AGG | + | chr7.1:4706801-4706820 | MS.gene07048:CDS | 40.0% | |
| ACAAATTTCGCCGACGTTAA+TGG | + | chr7.1:4705779-4705798 | MS.gene07048:CDS | 40.0% | |
| ACGGTCCTAATGTTACATTG+TGG | + | chr7.1:4706732-4706751 | MS.gene07048:intron | 40.0% | |
| ACTAAGGCACACATGTTTCA+TGG | + | chr7.1:4708530-4708549 | MS.gene07048:intron | 40.0% | |
| AGATCTGATGAAGGAACTGA+AGG | + | chr7.1:4706217-4706236 | MS.gene07048:CDS | 40.0% | |
| AGATGAACAGTCATTGTTCG+TGG | - | chr7.1:4707651-4707670 | None:intergenic | 40.0% | |
| AGATGTCAAACCATTGATGC+AGG | + | chr7.1:4706886-4706905 | MS.gene07048:CDS | 40.0% | |
| AGGACGGCCATTTACAATTA+GGG | + | chr7.1:4706802-4706821 | MS.gene07048:CDS | 40.0% | |
| AGGTTAGGGTTTACCTTTGT+CGG | - | chr7.1:4705671-4705690 | None:intergenic | 40.0% | |
| AGTTGCTGACACATACTTAG+AGG | + | chr7.1:4708024-4708043 | MS.gene07048:CDS | 40.0% | |
| ATGACTCAGAGATCTGATGA+AGG | + | chr7.1:4706208-4706227 | MS.gene07048:CDS | 40.0% | |
| CAAACATTGGTCAGCTAGTA+AGG | + | chr7.1:4706837-4706856 | MS.gene07048:CDS | 40.0% | |
| CCTGGAGAACTTATGTAAGT+GGG | + | chr7.1:4706555-4706574 | MS.gene07048:intron | 40.0% | |
| CGGCATGTGCAAAATGAAAT+TGG | + | chr7.1:4709062-4709081 | MS.gene07048:intron | 40.0% | |
| CGGTCCTAATGTTACATTGT+GGG | + | chr7.1:4706733-4706752 | MS.gene07048:intron | 40.0% | |
| CTAAAACCGACGTAAGGTAT+AGG | - | chr7.1:4707986-4708005 | None:intergenic | 40.0% | |
| CTAAGTATGTGTCAGCAACT+AGG | - | chr7.1:4708024-4708043 | None:intergenic | 40.0% | |
| GACATTGAAAGATGGGATGA+AGG | + | chr7.1:4708490-4708509 | MS.gene07048:CDS | 40.0% | |
| GTCATCATCGACAAATGTCT+CGG | - | chr7.1:4706176-4706195 | None:intergenic | 40.0% | |
| GTTAGCTGAACATGTTCCAA+AGG | + | chr7.1:4707617-4707636 | MS.gene07048:CDS | 40.0% | |
| TCATGATGACAATATCCCAG+TGG | - | chr7.1:4708210-4708229 | None:intergenic | 40.0% | |
| TCCTGGAGAACTTATGTAAG+TGG | + | chr7.1:4706554-4706573 | MS.gene07048:intron | 40.0% | |
| TGAAAGATGGGATGAAGGTA+AGG | + | chr7.1:4708495-4708514 | MS.gene07048:intron | 40.0% | |
| TGCTGCTGTTCAAAAAGATC+CGG | + | chr7.1:4708894-4708913 | MS.gene07048:CDS | 40.0% | |
| TTCATAACACAGCGCTTTGA+TGG | - | chr7.1:4707246-4707265 | None:intergenic | 40.0% | |
| ! | ATATGTTTGATGGGTGATCC+TGG | + | chr7.1:4708778-4708797 | MS.gene07048:CDS | 40.0% |
| ! | GTGTTACTGAGAATACTCGA+AGG | + | chr7.1:4706101-4706120 | MS.gene07048:CDS | 40.0% |
| ! | TCAAAGCATCTTCGAAAGGA+CGG | + | chr7.1:4706786-4706805 | MS.gene07048:CDS | 40.0% |
| ! | TGCTTAGCTCTCAATTGCTA+GGG | + | chr7.1:4706310-4706329 | MS.gene07048:intron | 40.0% |
| ! | TGGATTTGTTTGTGTCCACT+GGG | + | chr7.1:4708192-4708211 | MS.gene07048:intron | 40.0% |
| ! | TTGGATTTGTTTGTGTCCAC+TGG | + | chr7.1:4708191-4708210 | MS.gene07048:intron | 40.0% |
| !! | ATTGCTCTAAAACCGACGTA+AGG | - | chr7.1:4707992-4708011 | None:intergenic | 40.0% |
| !! | TACAAGAAGCGTCTGATTTC+AGG | - | chr7.1:4706277-4706296 | None:intergenic | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | + | chr7.1:4707415-4707434 | MS.gene07048:intron | 40.0% |
| !!! | AATGAGATGGTTTTAGAGGG+TGG | + | chr7.1:4708922-4708941 | MS.gene07048:CDS | 40.0% |
| !!! | CTGTTACTTCCTGTTTTTGG+AGG | - | chr7.1:4707194-4707213 | None:intergenic | 40.0% |
| !!! | GTGTTTTAGAAGCTGACTCT+TGG | - | chr7.1:4708809-4708828 | None:intergenic | 40.0% |
| AAGAGGTTTGTACTCTACCC+TGG | + | chr7.1:4707322-4707341 | MS.gene07048:intron | 45.0% | |
| ACACTGCTGTACTTGAAGTG+GGG | - | chr7.1:4708143-4708162 | None:intergenic | 45.0% | |
| ACAGACTGTTAGCATTGCCA+AGG | + | chr7.1:4709290-4709309 | MS.gene07048:CDS | 45.0% | |
| ACGGCCATTTACAATTAGGG+AGG | + | chr7.1:4706805-4706824 | MS.gene07048:CDS | 45.0% | |
| AGACACTGCTGTACTTGAAG+TGG | - | chr7.1:4708145-4708164 | None:intergenic | 45.0% | |
| AGATCCGGTGACAAATGAGA+TGG | + | chr7.1:4708909-4708928 | MS.gene07048:CDS | 45.0% | |
| AGTAACTAACCAGGATGAGG+AGG | - | chr7.1:4705817-4705836 | None:intergenic | 45.0% | |
| CATATTATATGCAGGGGCCA+GGG | - | chr7.1:4707492-4707511 | None:intergenic | 45.0% | |
| CCATCTTTCAATGTCCGATG+GGG | - | chr7.1:4708485-4708504 | None:intergenic | 45.0% | |
| CCCACTTACATAAGTTCTCC+AGG | - | chr7.1:4706558-4706577 | None:intergenic | 45.0% | |
| CCCATCGGACATTGAAAGAT+GGG | + | chr7.1:4708483-4708502 | MS.gene07048:CDS | 45.0% | |
| CCCATCTTTCAATGTCCGAT+GGG | - | chr7.1:4708486-4708505 | None:intergenic | 45.0% | |
| GACACTGCTGTACTTGAAGT+GGG | - | chr7.1:4708144-4708163 | None:intergenic | 45.0% | |
| GAGGTCAATTTCGACAGATC+TGG | - | chr7.1:4705934-4705953 | None:intergenic | 45.0% | |
| GAGGTGAAGGCTTCAAACAT+TGG | + | chr7.1:4706824-4706843 | MS.gene07048:CDS | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | + | chr7.1:4707521-4707540 | MS.gene07048:intron | 45.0% | |
| TCAAGTACAGCAGTGTCTCT+TGG | + | chr7.1:4708147-4708166 | MS.gene07048:intron | 45.0% | |
| TCACTACATCCCTGAATGCA+AGG | + | chr7.1:4709319-4709338 | MS.gene07048:CDS | 45.0% | |
| TCATCGACAAATGTCTCGGT+CGG | - | chr7.1:4706172-4706191 | None:intergenic | 45.0% | |
| TCCCATCTTTCAATGTCCGA+TGG | - | chr7.1:4708487-4708506 | None:intergenic | 45.0% | |
| TGCAATCGACGAACTAATGC+CGG | + | chr7.1:4706144-4706163 | MS.gene07048:CDS | 45.0% | |
| TGTCAAACCATTGATGCAGG+TGG | + | chr7.1:4706889-4706908 | MS.gene07048:CDS | 45.0% | |
| ! | CACCTAGGGTTTGTTTGGAT+TGG | - | chr7.1:4706678-4706697 | None:intergenic | 45.0% |
| ! | CTGCTTAGCTCTCAATTGCT+AGG | + | chr7.1:4706309-4706328 | MS.gene07048:intron | 45.0% |
| ! | GTCGATTTCAACACCGACAA+AGG | + | chr7.1:4705655-4705674 | MS.gene07048:CDS | 45.0% |
| ! | GTTTTCGTCCCTCCAAAAAC+AGG | + | chr7.1:4707182-4707201 | MS.gene07048:intron | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr7.1:4707521-4707540 | None:intergenic | 45.0% |
| ! | TTTGGCTTCGCCATTAACGT+CGG | - | chr7.1:4705792-4705811 | None:intergenic | 45.0% |
| !! | AACCAGGATGAGGAGGTATT+TGG | - | chr7.1:4705810-4705829 | None:intergenic | 45.0% |
| !! | AAGAAGCGTCTGATTTCAGG+AGG | - | chr7.1:4706274-4706293 | None:intergenic | 45.0% |
| !! | TGATTTCAGGAGGCATCTTC+TGG | - | chr7.1:4706264-4706283 | None:intergenic | 45.0% |
| !! | TTGCGGCTTTGAAATCTACC+AGG | + | chr7.1:4706931-4706950 | MS.gene07048:CDS | 45.0% |
| ACCAACTGAGCTAAGCTCAC+GGG | + | chr7.1:4707522-4707541 | MS.gene07048:intron | 50.0% | |
| ACCACTGGCAAAGGAAGTAG+TGG | + | chr7.1:4708859-4708878 | MS.gene07048:CDS | 50.0% | |
| ACTGTTAGCATTGCCAAGGC+TGG | + | chr7.1:4709294-4709313 | MS.gene07048:CDS | 50.0% | |
| ACTTTGACGCTCTCAGCTGA+AGG | - | chr7.1:4707290-4707309 | None:intergenic | 50.0% | |
| AGCCAAATACCTCCTCATCC+TGG | + | chr7.1:4705805-4705824 | MS.gene07048:CDS | 50.0% | |
| CCCCATCGGACATTGAAAGA+TGG | + | chr7.1:4708482-4708501 | MS.gene07048:CDS | 50.0% | |
| CTGTTAGCATTGCCAAGGCT+GGG | + | chr7.1:4709295-4709314 | MS.gene07048:CDS | 50.0% | |
| GACAGCAGTCCTTGCATTCA+GGG | - | chr7.1:4709331-4709350 | None:intergenic | 50.0% | |
| GACCAATGAAGCAGAGTCCA+GGG | - | chr7.1:4707342-4707361 | None:intergenic | 50.0% | |
| GCATATTATATGCAGGGGCC+AGG | - | chr7.1:4707493-4707512 | None:intergenic | 50.0% | |
| GGTCAGCTAGTAAGGATAGC+TGG | + | chr7.1:4706845-4706864 | MS.gene07048:CDS | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | - | chr7.1:4707522-4707541 | None:intergenic | 50.0% | |
| GTGTACACCTGTGAGGATTG+CGG | + | chr7.1:4706914-4706933 | MS.gene07048:CDS | 50.0% | |
| GTTCGTGGAATGTGACCCTT+TGG | - | chr7.1:4707636-4707655 | None:intergenic | 50.0% | |
| TACACAGCCACCTGCATCAA+TGG | - | chr7.1:4706899-4706918 | None:intergenic | 50.0% | |
| TACCCTGGACTCTGCTTCAT+TGG | + | chr7.1:4707337-4707356 | MS.gene07048:intron | 50.0% | |
| TAGGGGAGAACTCACGAGAA+AGG | + | chr7.1:4707671-4707690 | MS.gene07048:CDS | 50.0% | |
| TCCACTACTTCCTTTGCCAG+TGG | - | chr7.1:4708863-4708882 | None:intergenic | 50.0% | |
| TGACCAATGAAGCAGAGTCC+AGG | - | chr7.1:4707343-4707362 | None:intergenic | 50.0% | |
| TTCAAAGCCGCAATCCTCAC+AGG | - | chr7.1:4706924-4706943 | None:intergenic | 50.0% | |
| TTGCTGCAGCTAATCCAGCA+TGG | + | chr7.1:4709352-4709371 | MS.gene07048:CDS | 50.0% | |
| ! | GGCAAAGGAAGTAGTGGAGT+TGG | + | chr7.1:4708865-4708884 | MS.gene07048:CDS | 50.0% |
| ! | GGTGTTGAAATCGACGCCTT+TGG | - | chr7.1:4705650-4705669 | None:intergenic | 50.0% |
| ! | TTCTTGTTGGTGCTCCCCAT+CGG | + | chr7.1:4708468-4708487 | MS.gene07048:CDS | 50.0% |
| ! | TTGTGTGAGCTCTAGCCACT+AGG | - | chr7.1:4707433-4707452 | None:intergenic | 50.0% |
| !! | ATGCTGGATTAGCTGCAGCA+AGG | - | chr7.1:4709353-4709372 | None:intergenic | 50.0% |
| !! | GAAGGAACTGAAGGTGCTGA+TGG | + | chr7.1:4706226-4706245 | MS.gene07048:CDS | 50.0% |
| !!! | GGTTTTAGAGCAATGCGTGC+TGG | + | chr7.1:4707998-4708017 | MS.gene07048:CDS | 50.0% |
| !!! | GGTTTTAGAGGGTGGAGCAT+TGG | + | chr7.1:4708930-4708949 | MS.gene07048:CDS | 50.0% |
| CCAACTGAGCTAAGCTCACG+GGG | + | chr7.1:4707523-4707542 | MS.gene07048:intron | 55.0% | |
| GGACAGCAGTCCTTGCATTC+AGG | - | chr7.1:4709332-4709351 | None:intergenic | 55.0% | |
| GGATGTAGTGATCCCAGCCT+TGG | - | chr7.1:4709310-4709329 | None:intergenic | 55.0% | |
| GGTGTGTACACCACTGGCAA+AGG | + | chr7.1:4708850-4708869 | MS.gene07048:CDS | 55.0% | |
| GTGACGTCGTCGAACTCTCT+GGG | + | chr7.1:4707951-4707970 | MS.gene07048:CDS | 55.0% | |
| ! | ACAAATGTCTCGGTCGGCTC+CGG | - | chr7.1:4706166-4706185 | None:intergenic | 55.0% |
| ! | AGCTGACTCTTGGCAACACC+AGG | - | chr7.1:4708799-4708818 | None:intergenic | 55.0% |
| ! | GCACTGCTGCTGCTTCTTGT+TGG | + | chr7.1:4708455-4708474 | MS.gene07048:CDS | 55.0% |
| ! | TTGTGGAGAAGTGGGGTGTC+CGG | + | chr7.1:4707458-4707477 | MS.gene07048:intron | 55.0% |
| !! | TCAGGAGGCATCTTCTGGTG+CGG | - | chr7.1:4706259-4706278 | None:intergenic | 55.0% |
| CCAGTGGTGTACACACCCCT+GGG | - | chr7.1:4708847-4708866 | None:intergenic | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+TGG | - | chr7.1:4707526-4707545 | None:intergenic | 60.0% | |
| GAGAGTTCGACGACGTCACC+TGG | - | chr7.1:4707950-4707969 | None:intergenic | 60.0% | |
| GGTGACGTCGTCGAACTCTC+TGG | + | chr7.1:4707950-4707969 | MS.gene07048:CDS | 60.0% | |
| GGTGGCTGTGTACACCTGTG+AGG | + | chr7.1:4706907-4706926 | MS.gene07048:CDS | 60.0% | |
| ! | TGTGGAGAAGTGGGGTGTCC+GGG | + | chr7.1:4707459-4707478 | MS.gene07048:intron | 60.0% |
| GCCAGTGGTGTACACACCCC+TGG | - | chr7.1:4708848-4708867 | None:intergenic | 65.0% | |
| ! | CCCAGGGGTGTGTACACCAC+TGG | + | chr7.1:4708844-4708863 | MS.gene07048:CDS | 65.0% |
| ! | GTGGAGAAGTGGGGTGTCCG+GGG | + | chr7.1:4707460-4707479 | MS.gene07048:intron | 65.0% |
| AGGGGCCAGGGTTCGAACCC+CGG | - | chr7.1:4707480-4707499 | None:intergenic | 70.0% | |
| GGTGTCCGGGGTTCGAACCC+TGG | + | chr7.1:4707472-4707491 | MS.gene07048:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 4705640 | 4709380 | 4705640 | ID=MS.gene07048 |
| chr7.1 | mRNA | 4705640 | 4709380 | 4705640 | ID=MS.gene07048.t1;Parent=MS.gene07048 |
| chr7.1 | exon | 4705640 | 4705676 | 4705640 | ID=MS.gene07048.t1.exon1;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4705640 | 4705676 | 4705640 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4705759 | 4705826 | 4705759 | ID=MS.gene07048.t1.exon2;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4705759 | 4705826 | 4705759 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4705909 | 4705968 | 4705909 | ID=MS.gene07048.t1.exon3;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4705909 | 4705968 | 4705909 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4706070 | 4706293 | 4706070 | ID=MS.gene07048.t1.exon4;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4706070 | 4706293 | 4706070 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4706775 | 4706952 | 4706775 | ID=MS.gene07048.t1.exon5;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4706775 | 4706952 | 4706775 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4707204 | 4707326 | 4707204 | ID=MS.gene07048.t1.exon6;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4707204 | 4707326 | 4707204 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4707603 | 4707692 | 4707603 | ID=MS.gene07048.t1.exon7;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4707603 | 4707692 | 4707603 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4707941 | 4708083 | 4707941 | ID=MS.gene07048.t1.exon8;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4707941 | 4708083 | 4707941 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4708334 | 4708511 | 4708334 | ID=MS.gene07048.t1.exon9;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4708334 | 4708511 | 4708334 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4708760 | 4708951 | 4708760 | ID=MS.gene07048.t1.exon10;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4708760 | 4708951 | 4708760 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| chr7.1 | exon | 4709201 | 4709380 | 4709201 | ID=MS.gene07048.t1.exon11;Parent=MS.gene07048.t1 |
| chr7.1 | CDS | 4709201 | 4709380 | 4709201 | ID=cds.MS.gene07048.t1;Parent=MS.gene07048.t1 |
| Gene Sequence |
| Protein sequence |
