Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05688.t1 | XP_003600393.1 | 90.2 | 399 | 29 | 1 | 1 | 389 | 1 | 399 | 2.10E-196 | 694.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05688.t1 | P52432 | 43.3 | 351 | 150 | 6 | 51 | 388 | 26 | 340 | 4.2e-68 | 260.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05688.t1 | G7IXS2 | 90.2 | 399 | 29 | 1 | 1 | 389 | 1 | 399 | 1.5e-196 | 694.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05688 | MS.gene070299 | 0.81921 | 1.31E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26950 | MS.gene05688 | PPI |
| MS.gene28944 | MS.gene05688 | PPI |
| MS.gene26516 | MS.gene05688 | PPI |
| MS.gene24295 | MS.gene05688 | PPI |
| MS.gene04335 | MS.gene05688 | PPI |
| MS.gene43180 | MS.gene05688 | PPI |
| MS.gene95440 | MS.gene05688 | PPI |
| MS.gene04160 | MS.gene05688 | PPI |
| MS.gene64653 | MS.gene05688 | PPI |
| MS.gene26777 | MS.gene05688 | PPI |
| MS.gene049824 | MS.gene05688 | PPI |
| MS.gene022098 | MS.gene05688 | PPI |
| MS.gene051008 | MS.gene05688 | PPI |
| MS.gene84578 | MS.gene05688 | PPI |
| MS.gene68633 | MS.gene05688 | PPI |
| MS.gene047813 | MS.gene05688 | PPI |
| MS.gene070299 | MS.gene05688 | PPI |
| MS.gene053492 | MS.gene05688 | PPI |
| MS.gene39636 | MS.gene05688 | PPI |
| MS.gene064140 | MS.gene05688 | PPI |
| MS.gene08465 | MS.gene05688 | PPI |
| MS.gene81051 | MS.gene05688 | PPI |
| MS.gene94781 | MS.gene05688 | PPI |
| MS.gene055112 | MS.gene05688 | PPI |
| MS.gene030166 | MS.gene05688 | PPI |
| MS.gene97308 | MS.gene05688 | PPI |
| MS.gene004126 | MS.gene05688 | PPI |
| MS.gene65249 | MS.gene05688 | PPI |
| MS.gene27326 | MS.gene05688 | PPI |
| MS.gene46015 | MS.gene05688 | PPI |
| MS.gene004127 | MS.gene05688 | PPI |
| MS.gene049822 | MS.gene05688 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05688.t1 | MTR_3g060690 | 93.484 | 399 | 16 | 1 | 1 | 389 | 1 | 399 | 0.0 | 738 |
| MS.gene05688.t1 | MTR_4g084150 | 32.198 | 323 | 178 | 9 | 71 | 384 | 5 | 295 | 8.94e-39 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05688.t1 | AT1G60620 | 64.267 | 375 | 109 | 6 | 28 | 389 | 23 | 385 | 3.35e-169 | 478 |
| MS.gene05688.t1 | AT1G60620 | 66.867 | 332 | 95 | 5 | 61 | 389 | 1 | 320 | 4.69e-157 | 445 |
| MS.gene05688.t1 | AT1G60850 | 59.569 | 371 | 123 | 7 | 28 | 384 | 15 | 372 | 3.03e-150 | 430 |
| MS.gene05688.t1 | AT1G60850 | 59.569 | 371 | 123 | 7 | 28 | 384 | 15 | 372 | 3.03e-150 | 430 |
| MS.gene05688.t1 | AT1G60850 | 59.569 | 371 | 123 | 7 | 28 | 384 | 15 | 372 | 3.03e-150 | 430 |
| MS.gene05688.t1 | AT1G60850 | 61.597 | 263 | 84 | 6 | 28 | 276 | 15 | 274 | 2.62e-105 | 313 |
| MS.gene05688.t1 | AT2G15430 | 34.259 | 324 | 168 | 12 | 73 | 384 | 6 | 296 | 4.46e-41 | 147 |
| MS.gene05688.t1 | AT2G15400 | 32.716 | 324 | 173 | 10 | 73 | 384 | 6 | 296 | 1.41e-37 | 138 |
| MS.gene05688.t1 | AT2G15430 | 35.366 | 246 | 124 | 10 | 73 | 306 | 6 | 228 | 3.41e-33 | 124 |
| MS.gene05688.t1 | AT2G15430 | 35.366 | 246 | 124 | 10 | 73 | 306 | 6 | 228 | 4.89e-33 | 124 |
| MS.gene05688.t1 | AT2G15400 | 34.836 | 244 | 124 | 8 | 73 | 304 | 6 | 226 | 7.11e-30 | 115 |
Find 76 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCAGCTCCTTGTAATT+TGG | 0.169473 | 3.2:-51650845 | MS.gene05688:CDS |
| TACTGAAGCTGTGAAGATTC+TGG | 0.313557 | 3.2:-51649266 | MS.gene05688:CDS |
| AAGGGTCAACCTCGTCTTAC+TGG | 0.323513 | 3.2:-51651101 | MS.gene05688:intron |
| TAGGAATGAGACCCAGTCTA+TGG | 0.328096 | 3.2:+51651387 | None:intergenic |
| TTCTAAGTTCATGATGTAAT+CGG | 0.329327 | 3.2:+51654189 | None:intergenic |
| GTATTTGATATAGAAGATAT+TGG | 0.349618 | 3.2:-51650002 | MS.gene05688:CDS |
| TCTGGTGCTTATGCAGCATT+AGG | 0.369089 | 3.2:-51653119 | MS.gene05688:CDS |
| ATTGATGAACAAGAACAAAA+TGG | 0.369721 | 3.2:-51654226 | MS.gene05688:CDS |
| ACCGATACCATACAATATTC+TGG | 0.396142 | 3.2:-51653137 | MS.gene05688:CDS |
| GCTTCAGTAAATAGCACATC+AGG | 0.402965 | 3.2:+51649280 | None:intergenic |
| AGCTAAACTTGGACCTGGTC+AGG | 0.409422 | 3.2:-51650812 | MS.gene05688:intron |
| CGAAGTTCTTTCCCATAGAC+TGG | 0.412442 | 3.2:-51651399 | MS.gene05688:CDS |
| CTAGTTACTATTGAATCAAC+TGG | 0.412801 | 3.2:-51649313 | MS.gene05688:intron |
| TCTATATCAAATACTTTAGC+TGG | 0.413368 | 3.2:+51650011 | None:intergenic |
| ACATTTGCTTACTAGTTCTT+CGG | 0.415942 | 3.2:+51650034 | None:intergenic |
| TGTTGGATCGGCAGCTGATT+TGG | 0.427103 | 3.2:+51650918 | None:intergenic |
| CCCGATCTATTTGAATATCC+AGG | 0.428296 | 3.2:-51651353 | MS.gene05688:intron |
| CGAAAAGCATTGGCAACTGC+TGG | 0.428330 | 3.2:+51652993 | None:intergenic |
| GAAGCGGAAGAAGGCGAAGA+AGG | 0.431432 | 3.2:-51649719 | MS.gene05688:CDS |
| ACCTGGATATTCAAATAGAT+CGG | 0.446131 | 3.2:+51651352 | None:intergenic |
| CTACATGTTCGTTGTGAAAA+GGG | 0.452109 | 3.2:-51651119 | MS.gene05688:CDS |
| ACTACATGTTCGTTGTGAAA+AGG | 0.452260 | 3.2:-51651120 | MS.gene05688:CDS |
| AGATGAGTGGGAAGCGTTGA+AGG | 0.453951 | 3.2:+51654160 | None:intergenic |
| CGCTGAAGTGGTTGCCTCAA+GGG | 0.462430 | 3.2:-51650963 | MS.gene05688:CDS |
| TTTCACAACGAACATGTAGT+TGG | 0.463391 | 3.2:+51651123 | None:intergenic |
| CAAGAACAAAATGGAGGAAG+AGG | 0.466335 | 3.2:-51654217 | MS.gene05688:CDS |
| TGTACTCACGAAAGATGTTA+AGG | 0.487182 | 3.2:-51650066 | MS.gene05688:CDS |
| GACATGGAGTTTGACATGAT+TGG | 0.487643 | 3.2:-51653023 | MS.gene05688:CDS |
| CGATACCAAGCAGTAGCAAC+CGG | 0.487717 | 3.2:+51650203 | None:intergenic |
| CCTGGATATTCAAATAGATC+GGG | 0.490529 | 3.2:+51651353 | None:intergenic |
| TTGGTAAGACACATGCGAAA+TGG | 0.496915 | 3.2:-51650229 | MS.gene05688:CDS |
| GAGAATTCTTCGAAAAGCAT+TGG | 0.497782 | 3.2:+51652983 | None:intergenic |
| ACATCCAAATTACAAGGAGC+TGG | 0.497920 | 3.2:+51650841 | None:intergenic |
| GATGTTATAATAGCTAAACT+TGG | 0.499100 | 3.2:-51650823 | MS.gene05688:CDS |
| AGCGGAAGAAGGCGAAGAAG+GGG | 0.502241 | 3.2:-51649717 | MS.gene05688:CDS |
| GATATAGAAGATATTGGAAG+AGG | 0.503114 | 3.2:-51649996 | MS.gene05688:intron |
| AAGCGGAAGAAGGCGAAGAA+GGG | 0.510724 | 3.2:-51649718 | MS.gene05688:CDS |
| TCTAAGTTCATGATGTAATC+GGG | 0.512453 | 3.2:+51654190 | None:intergenic |
| GGTCTCCGGTTGCTACTGCT+TGG | 0.528704 | 3.2:-51650208 | MS.gene05688:CDS |
| CTTGAAGCTCACGCTGTCAA+AGG | 0.530488 | 3.2:-51650254 | MS.gene05688:CDS |
| GACACATGCGAAATGGTCTC+CGG | 0.531525 | 3.2:-51650222 | MS.gene05688:CDS |
| ACTCTTTCAATAGCCATGGT+TGG | 0.537705 | 3.2:+51651455 | None:intergenic |
| GAAAGATGTTAAGGATGAGT+TGG | 0.540853 | 3.2:-51650057 | MS.gene05688:CDS |
| ATATACTCTTTCAATAGCCA+TGG | 0.546326 | 3.2:+51651451 | None:intergenic |
| GCGAGCATGCACTCTGTGTA+GGG | 0.547249 | 3.2:-51649753 | MS.gene05688:CDS |
| ACCAGAATATTGTATGGTAT+CGG | 0.547904 | 3.2:+51653136 | None:intergenic |
| ATAAGCACCAGAATATTGTA+TGG | 0.550616 | 3.2:+51653130 | None:intergenic |
| TGCATAAGAGAAGCGGAAGA+AGG | 0.551993 | 3.2:-51649728 | MS.gene05688:CDS |
| AGTTGATAACAGTGTACGGT+TGG | 0.555301 | 3.2:-51653096 | MS.gene05688:CDS |
| GCTCACGCTGTCAAAGGCAT+TGG | 0.566987 | 3.2:-51650248 | MS.gene05688:CDS |
| ACGCTGAAGTGGTTGCCTCA+AGG | 0.568464 | 3.2:-51650964 | MS.gene05688:CDS |
| AGGAATGAGACCCAGTCTAT+GGG | 0.569217 | 3.2:+51651388 | None:intergenic |
| AAAGAAGAATCAAGAAAGCT+CGG | 0.575459 | 3.2:+51649219 | None:intergenic |
| CGCGAGCATGCACTCTGTGT+AGG | 0.583834 | 3.2:-51649754 | MS.gene05688:CDS |
| TCGAAGAATTCTCATAGCAG+AGG | 0.583840 | 3.2:-51652973 | MS.gene05688:intron |
| TGAAATCAGATACGCTGAAG+TGG | 0.586218 | 3.2:-51650975 | MS.gene05688:CDS |
| TAGGAGTTGATAACAGTGTA+CGG | 0.591277 | 3.2:-51653100 | MS.gene05688:CDS |
| AGATCGGGATCAGCAGCGAT+AGG | 0.593326 | 3.2:+51651368 | None:intergenic |
| ACGCATCACGGATGAAGACA+TGG | 0.597126 | 3.2:-51653039 | MS.gene05688:CDS |
| TGAAGATGAATCGATGGCAT+CGG | 0.599176 | 3.2:-51654251 | MS.gene05688:CDS |
| GGGAGTGAGCTTATTGCTGA+AGG | 0.600445 | 3.2:-51650943 | MS.gene05688:CDS |
| CTTCAGTAAATAGCACATCA+GGG | 0.604704 | 3.2:+51649281 | None:intergenic |
| ATTATAACATCCAAATTACA+AGG | 0.606878 | 3.2:+51650835 | None:intergenic |
| GCGGAAGAAGGCGAAGAAGG+GGG | 0.606959 | 3.2:-51649716 | MS.gene05688:CDS |
| GTCGTCTGAAGATGAATCGA+TGG | 0.614778 | 3.2:-51654257 | MS.gene05688:CDS |
| GAAGTTCTTTCCCATAGACT+GGG | 0.621696 | 3.2:-51651398 | MS.gene05688:CDS |
| TAGGGAATGCATAAGAGAAG+CGG | 0.637709 | 3.2:-51649735 | MS.gene05688:CDS |
| GATGAACAAGAACAAAATGG+AGG | 0.639321 | 3.2:-51654223 | MS.gene05688:CDS |
| TTCAGTAAATAGCACATCAG+GGG | 0.644868 | 3.2:+51649282 | None:intergenic |
| ATAATAGCTAAACTTGGACC+TGG | 0.654593 | 3.2:-51650817 | MS.gene05688:CDS |
| GCAATAAGCTCACTCCCTTG+AGG | 0.657191 | 3.2:+51650949 | None:intergenic |
| GGTTGAAGTGAAACGCATCA+CGG | 0.668140 | 3.2:-51653051 | MS.gene05688:CDS |
| TCAGTAAATAGCACATCAGG+GGG | 0.690486 | 3.2:+51649283 | None:intergenic |
| TTGGTATCGAATGCTTCCCG+AGG | 0.698025 | 3.2:-51650189 | MS.gene05688:intron |
| TTATAAATAGATGATGCCAG+AGG | 0.706296 | 3.2:-51651176 | MS.gene05688:intron |
| AGTGATTTACCAGTAAGACG+AGG | 0.712738 | 3.2:+51651092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCAAATTCAAAATTA+AGG | + | chr3.2:51652915-51652934 | None:intergenic | 10.0% |
| !! | AAATTCAAATTCAAAATTAA+GGG | + | chr3.2:51652914-51652933 | None:intergenic | 10.0% |
| !! | AATTCCAAAAAAAAAAATTA+TGG | + | chr3.2:51651233-51651252 | None:intergenic | 10.0% |
| !! | TAAAATTATAAAAACGATAA+AGG | + | chr3.2:51652011-51652030 | None:intergenic | 10.0% |
| !!! | TTAACCATAATTTTTTTTTT+TGG | - | chr3.2:51651226-51651245 | MS.gene05688:intron | 10.0% |
| !!! | TTTATCGTTTTTATAATTTT+AGG | - | chr3.2:51652010-51652029 | MS.gene05688:intron | 10.0% |
| !! | AACTAAAAATTGTACAAATT+TGG | - | chr3.2:51654079-51654098 | MS.gene05688:intron | 15.0% |
| !! | ATAAACAAAAGTAATTAACT+TGG | + | chr3.2:51650908-51650927 | None:intergenic | 15.0% |
| !! | ATTTGATATATTTGTTTGTT+TGG | - | chr3.2:51650289-51650308 | MS.gene05688:intron | 15.0% |
| !! | CATCTATTTATAATAAAGAA+AGG | + | chr3.2:51652307-51652326 | None:intergenic | 15.0% |
| !! | TAATACTGGTAAAATATATT+AGG | + | chr3.2:51654040-51654059 | None:intergenic | 15.0% |
| !! | TTACCTATTGTTAAAAAAAT+AGG | + | chr3.2:51649898-51649917 | None:intergenic | 15.0% |
| !!! | ATATTTGGTTTTGAATTTAT+CGG | - | chr3.2:51650584-51650603 | MS.gene05688:intron | 15.0% |
| !!! | ATTTAACATTATTCATGTTT+TGG | - | chr3.2:51650321-51650340 | MS.gene05688:intron | 15.0% |
| !!! | CTTTTATAATTTTGTCTATT+AGG | + | chr3.2:51651167-51651186 | None:intergenic | 15.0% |
| !!! | TAACCTATTTTTTTAACAAT+AGG | - | chr3.2:51649892-51649911 | MS.gene05688:intron | 15.0% |
| !!! | TTAGTATTCATAATTTTTTG+TGG | - | chr3.2:51650796-51650815 | MS.gene05688:intron | 15.0% |
| !!! | TTGTTTGAATTTGTTTATTT+GGG | + | chr3.2:51650059-51650078 | None:intergenic | 15.0% |
| !! | AATAACGAAAATAATGAAAG+GGG | + | chr3.2:51649429-51649448 | None:intergenic | 20.0% |
| !! | ACAATAGGTAAAATAAAGTT+AGG | - | chr3.2:51649907-51649926 | MS.gene05688:intron | 20.0% |
| !! | ACGAAATTAATGGTATAATT+TGG | - | chr3.2:51651424-51651443 | MS.gene05688:CDS | 20.0% |
| !! | AGAATAACGAAAATAATGAA+AGG | + | chr3.2:51649431-51649450 | None:intergenic | 20.0% |
| !! | AGATATAAAAATCTAACACT+AGG | + | chr3.2:51653544-51653563 | None:intergenic | 20.0% |
| !! | ATTATAACATCCAAATTACA+AGG | + | chr3.2:51652658-51652677 | None:intergenic | 20.0% |
| !! | ATTTATAGAACAAATATGAG+AGG | - | chr3.2:51651298-51651317 | MS.gene05688:intron | 20.0% |
| !! | GAATAACGAAAATAATGAAA+GGG | + | chr3.2:51649430-51649449 | None:intergenic | 20.0% |
| !! | GACTCATATAAGAATAAAAA+GGG | - | chr3.2:51650697-51650716 | MS.gene05688:intron | 20.0% |
| !! | GGCATATTAAATTAAATTCA+TGG | - | chr3.2:51653869-51653888 | MS.gene05688:intron | 20.0% |
| !! | GTATTTGATATAGAAGATAT+TGG | - | chr3.2:51653488-51653507 | MS.gene05688:intron | 20.0% |
| !! | GTTTATCGAATATTATTTCA+TGG | - | chr3.2:51650922-51650941 | MS.gene05688:CDS | 20.0% |
| !! | TACATATCTTAAACTAATAC+TGG | + | chr3.2:51654054-51654073 | None:intergenic | 20.0% |
| !! | TAGCTTCTATAAAAATTTCA+AGG | - | chr3.2:51650418-51650437 | MS.gene05688:intron | 20.0% |
| !! | TATATCATAAGCACTAAATT+GGG | + | chr3.2:51649737-51649756 | None:intergenic | 20.0% |
| !! | TGACTCATATAAGAATAAAA+AGG | - | chr3.2:51650696-51650715 | MS.gene05688:intron | 20.0% |
| !! | TTAGTTAATATATCTCTGTT+TGG | - | chr3.2:51649672-51649691 | MS.gene05688:CDS | 20.0% |
| !! | TTATATCATAAGCACTAAAT+TGG | + | chr3.2:51649738-51649757 | None:intergenic | 20.0% |
| !! | TTTATAGAACAAATATGAGA+GGG | - | chr3.2:51651299-51651318 | MS.gene05688:intron | 20.0% |
| !!! | AAATTGTACAAATTTGGTTT+TGG | - | chr3.2:51654085-51654104 | MS.gene05688:intron | 20.0% |
| !!! | AATTTTCTTCATGTTAAAAG+TGG | + | chr3.2:51650986-51651005 | None:intergenic | 20.0% |
| !!! | ACCATTAATTTCGTTTTTTT+GGG | + | chr3.2:51651418-51651437 | None:intergenic | 20.0% |
| !!! | AGAATTTTTGAAAAAACTTG+TGG | + | chr3.2:51650113-51650132 | None:intergenic | 20.0% |
| !!! | GTTGTTTGAATTTGTTTATT+TGG | + | chr3.2:51650060-51650079 | None:intergenic | 20.0% |
| !!! | TACCATTAATTTCGTTTTTT+TGG | + | chr3.2:51651419-51651438 | None:intergenic | 20.0% |
| !!! | TATAATTTTGTCTATTAGGT+GGG | + | chr3.2:51651163-51651182 | None:intergenic | 20.0% |
| !!! | TGAAAGTGTTTTTTTATGAA+AGG | + | chr3.2:51651206-51651225 | None:intergenic | 20.0% |
| !!! | TTAAAAGTCGTAAATGTTTT+TGG | + | chr3.2:51652598-51652617 | None:intergenic | 20.0% |
| !!! | TTATAATTTTGTCTATTAGG+TGG | + | chr3.2:51651164-51651183 | None:intergenic | 20.0% |
| !!! | TTATGCAATTCTTTTGTTAT+AGG | - | chr3.2:51650860-51650879 | MS.gene05688:CDS | 20.0% |
| !!! | TTTGAATTTGAATTTTGTGA+AGG | - | chr3.2:51652919-51652938 | MS.gene05688:intron | 20.0% |
| ! | AAAGTTTCTAACTTCATAAC+TGG | - | chr3.2:51649532-51649551 | MS.gene05688:intron | 25.0% |
| ! | AAGTTTCTAACTTCATAACT+GGG | - | chr3.2:51649533-51649552 | MS.gene05688:intron | 25.0% |
| ! | AATACAAATGTGGCTTAATT+GGG | - | chr3.2:51650171-51650190 | MS.gene05688:intron | 25.0% |
| ! | AATCATTAGGTTAGAGAATT+GGG | + | chr3.2:51651376-51651395 | None:intergenic | 25.0% |
| ! | ACACATGTAAGATATTTCAA+GGG | + | chr3.2:51654141-51654160 | None:intergenic | 25.0% |
| ! | ACTAAAATTCTTCTATGTTC+AGG | + | chr3.2:51653914-51653933 | None:intergenic | 25.0% |
| ! | ACTATACAGCTTATGTATAT+AGG | - | chr3.2:51649838-51649857 | MS.gene05688:intron | 25.0% |
| ! | AGATCAAGATGATAAATAAC+CGG | - | chr3.2:51653965-51653984 | MS.gene05688:intron | 25.0% |
| ! | AGCTTACAAAAATAGCTTAT+AGG | + | chr3.2:51649816-51649835 | None:intergenic | 25.0% |
| ! | ATAACGAAAATAATGAAAGG+GGG | + | chr3.2:51649428-51649447 | None:intergenic | 25.0% |
| ! | ATCATCACAGAAAACAAAAT+GGG | + | chr3.2:51650561-51650580 | None:intergenic | 25.0% |
| ! | ATTGATGAACAAGAACAAAA+TGG | - | chr3.2:51649264-51649283 | MS.gene05688:CDS | 25.0% |
| ! | CAATAATCTGTATAAGAACT+CGG | + | chr3.2:51654111-51654130 | None:intergenic | 25.0% |
| ! | CATGTACAAATTCTTTCTAT+TGG | - | chr3.2:51650261-51650280 | MS.gene05688:CDS | 25.0% |
| ! | CGTTGAAAAAAATACTTCAT+TGG | + | chr3.2:51653940-51653959 | None:intergenic | 25.0% |
| ! | GATGTTATAATAGCTAAACT+TGG | - | chr3.2:51652667-51652686 | MS.gene05688:intron | 25.0% |
| ! | TAATACAAATGTGGCTTAAT+TGG | - | chr3.2:51650170-51650189 | MS.gene05688:intron | 25.0% |
| ! | TACAAATTCTTTCTATTGGT+GGG | - | chr3.2:51650265-51650284 | MS.gene05688:CDS | 25.0% |
| ! | TACTAATTACAAGTTTGCAT+TGG | + | chr3.2:51653132-51653151 | None:intergenic | 25.0% |
| ! | TCCCAAAAAAACGAAATTAA+TGG | - | chr3.2:51651414-51651433 | MS.gene05688:CDS | 25.0% |
| ! | TCTATATCAAATACTTTAGC+TGG | + | chr3.2:51653482-51653501 | None:intergenic | 25.0% |
| ! | TGGTGTTTAATTGAATCATT+AGG | + | chr3.2:51651389-51651408 | None:intergenic | 25.0% |
| ! | TTAAATTTGTAATAAGCCAG+AGG | - | chr3.2:51651036-51651055 | MS.gene05688:intron | 25.0% |
| ! | TTATAGGATGTATTGTTTCA+TGG | - | chr3.2:51650876-51650895 | MS.gene05688:CDS | 25.0% |
| ! | TTCTAAGTTCATGATGTAAT+CGG | + | chr3.2:51649304-51649323 | None:intergenic | 25.0% |
| ! | TTGTGTGATAAATGGAAAAT+TGG | - | chr3.2:51652217-51652236 | MS.gene05688:intron | 25.0% |
| ! | TTGTGTTTGTAAGCTTATAA+TGG | - | chr3.2:51649622-51649641 | MS.gene05688:intron | 25.0% |
| ! | TTTCATTTGTAAGTATTACG+TGG | - | chr3.2:51653848-51653867 | MS.gene05688:intron | 25.0% |
| ! | TTTGAATTTGTCAAAATCAC+CGG | + | chr3.2:51653987-51654006 | None:intergenic | 25.0% |
| !! | ACTTTGGAAGGATAAAAATT+AGG | - | chr3.2:51649557-51649576 | MS.gene05688:intron | 25.0% |
| !! | TTATTTAGAACGCAAACATT+AGG | - | chr3.2:51650732-51650751 | MS.gene05688:intron | 25.0% |
| !!! | AACAGTTTGACTTCATTTTA+TGG | + | chr3.2:51649778-51649797 | None:intergenic | 25.0% |
| !!! | AGTTAGAAACTTTTCTGAAA+TGG | + | chr3.2:51649525-51649544 | None:intergenic | 25.0% |
| !!! | GTTAGAAACTTTTCTGAAAT+GGG | + | chr3.2:51649524-51649543 | None:intergenic | 25.0% |
| !!! | TTTATCGGTCGATTTTATTA+AGG | - | chr3.2:51650599-51650618 | MS.gene05688:intron | 25.0% |
| !!! | TTTGAATTTTGTGAAGGTAT+AGG | - | chr3.2:51652925-51652944 | MS.gene05688:intron | 25.0% |
| AATAAAAGGCCAAAATTCAC+TGG | + | chr3.2:51650762-51650781 | None:intergenic | 30.0% | |
| ACAAATTCAAACAACCACAT+AGG | - | chr3.2:51650065-51650084 | MS.gene05688:CDS | 30.0% | |
| ACCAGAATATTGTATGGTAT+CGG | + | chr3.2:51650357-51650376 | None:intergenic | 30.0% | |
| ACCTGGATATTCAAATAGAT+CGG | + | chr3.2:51652141-51652160 | None:intergenic | 30.0% | |
| ACGATGACGTAAAATCAATT+TGG | + | chr3.2:51653602-51653621 | None:intergenic | 30.0% | |
| AGATAGATAGTTACATGTTG+AGG | + | chr3.2:51649396-51649415 | None:intergenic | 30.0% | |
| ATAAGCACCAGAATATTGTA+TGG | + | chr3.2:51650363-51650382 | None:intergenic | 30.0% | |
| ATAGAAAAGAAACACAGAGA+AGG | + | chr3.2:51652711-51652730 | None:intergenic | 30.0% | |
| ATAGTGTAGTTTAAGCCTAA+TGG | - | chr3.2:51651959-51651978 | MS.gene05688:intron | 30.0% | |
| ATATACTCTTTCAATAGCCA+TGG | + | chr3.2:51652042-51652061 | None:intergenic | 30.0% | |
| ATATATGTTATTCCCTACCT+CGG | + | chr3.2:51653321-51653340 | None:intergenic | 30.0% | |
| ATTAAGGGACAAATACATGT+TGG | + | chr3.2:51652899-51652918 | None:intergenic | 30.0% | |
| CACACATGTAAGATATTTCA+AGG | + | chr3.2:51654142-51654161 | None:intergenic | 30.0% | |
| CACATGTAAGATATTTCAAG+GGG | + | chr3.2:51654140-51654159 | None:intergenic | 30.0% | |
| CATCATCACAGAAAACAAAA+TGG | + | chr3.2:51650562-51650581 | None:intergenic | 30.0% | |
| CATGAAGAAAATTTGCAACA+AGG | - | chr3.2:51650993-51651012 | MS.gene05688:intron | 30.0% | |
| CTAGTTACTATTGAATCAAC+TGG | - | chr3.2:51654177-51654196 | MS.gene05688:CDS | 30.0% | |
| GAATCATTAGGTTAGAGAAT+TGG | + | chr3.2:51651377-51651396 | None:intergenic | 30.0% | |
| GATATAGAAGATATTGGAAG+AGG | - | chr3.2:51653494-51653513 | MS.gene05688:intron | 30.0% | |
| GTACAAATTCTTTCTATTGG+TGG | - | chr3.2:51650264-51650283 | MS.gene05688:CDS | 30.0% | |
| TAATACCACGTTAGTATGTT+CGG | - | chr3.2:51650824-51650843 | MS.gene05688:CDS | 30.0% | |
| TAGAAAAGAAACACAGAGAA+GGG | + | chr3.2:51652710-51652729 | None:intergenic | 30.0% | |
| TATTGTAATATCACCAGACA+AGG | + | chr3.2:51652483-51652502 | None:intergenic | 30.0% | |
| TCATCACAGAAAACAAAATG+GGG | + | chr3.2:51650560-51650579 | None:intergenic | 30.0% | |
| TCTAAGTTCATGATGTAATC+GGG | + | chr3.2:51649303-51649322 | None:intergenic | 30.0% | |
| TGACTTTCTTGTGTGATAAA+TGG | - | chr3.2:51652209-51652228 | MS.gene05688:intron | 30.0% | |
| TTACAATTTCAGAGAAGAAG+AGG | - | chr3.2:51651341-51651360 | MS.gene05688:intron | 30.0% | |
| TTATAAATAGATGATGCCAG+AGG | - | chr3.2:51652314-51652333 | MS.gene05688:intron | 30.0% | |
| ! | ACATTTGCTTACTAGTTCTT+CGG | + | chr3.2:51653459-51653478 | None:intergenic | 30.0% |
| ! | ACTCTGTTTTGTATCTTAGA+AGG | - | chr3.2:51649592-51649611 | MS.gene05688:intron | 30.0% |
| ! | CGTTCTAAATAATCAGTTGA+AGG | + | chr3.2:51650724-51650743 | None:intergenic | 30.0% |
| ! | GAAATAATATGCGTGTTGTT+TGG | - | chr3.2:51652239-51652258 | MS.gene05688:intron | 30.0% |
| ! | TACAACTTCCAGTTTTCTAT+AGG | + | chr3.2:51653164-51653183 | None:intergenic | 30.0% |
| ! | TATCCAACCTTTTCTATACA+AGG | + | chr3.2:51652273-51652292 | None:intergenic | 30.0% |
| ! | TTAGGATAACCAGTGAATTT+TGG | - | chr3.2:51650750-51650769 | MS.gene05688:intron | 30.0% |
| ! | TTCTGTGATGATGTCATATT+TGG | - | chr3.2:51650569-51650588 | MS.gene05688:intron | 30.0% |
| !! | AAGTTTGCTATTAATCCAAC+AGG | - | chr3.2:51652808-51652827 | MS.gene05688:intron | 30.0% |
| !! | AATAGCAAACTTGCTAAGAT+AGG | + | chr3.2:51652800-51652819 | None:intergenic | 30.0% |
| !! | ATAGCAAACTTGCTAAGATA+GGG | + | chr3.2:51652799-51652818 | None:intergenic | 30.0% |
| !! | ATGCTTTGCTTTTATTCTCT+AGG | - | chr3.2:51653400-51653419 | MS.gene05688:intron | 30.0% |
| !! | CTTTCTGTTTTGAACAATGA+TGG | - | chr3.2:51653562-51653581 | MS.gene05688:intron | 30.0% |
| !! | GCTATTTTCATAAGCTATCT+TGG | - | chr3.2:51649951-51649970 | MS.gene05688:intron | 30.0% |
| !! | GTTTGACTTCATTTTATGGT+CGG | + | chr3.2:51649774-51649793 | None:intergenic | 30.0% |
| !! | TATAATTTGGCCTTTTCAAG+TGG | - | chr3.2:51651437-51651456 | MS.gene05688:CDS | 30.0% |
| !! | TGAATTTTGGCCTTTTATTG+AGG | - | chr3.2:51650763-51650782 | MS.gene05688:intron | 30.0% |
| !!! | AAATGTTTTTGGTGTTGGAT+CGG | + | chr3.2:51652587-51652606 | None:intergenic | 30.0% |
| !!! | ATAATTTTAGGTTCCAACCA+TGG | - | chr3.2:51652022-51652041 | MS.gene05688:intron | 30.0% |
| !!! | TTTTGAAGTTCAAGATGAGT+GGG | + | chr3.2:51649345-51649364 | None:intergenic | 30.0% |
| !!! | TTTTTGAAGTTCAAGATGAG+TGG | + | chr3.2:51649346-51649365 | None:intergenic | 30.0% |
| AAAAGAGAAAGCCAAAGAGA+TGG | + | chr3.2:51653657-51653676 | None:intergenic | 35.0% | |
| AAAATCTGATTACCGCCATT+AGG | + | chr3.2:51651977-51651996 | None:intergenic | 35.0% | |
| AAAGAGAAAGCCAAAGAGAT+GGG | + | chr3.2:51653656-51653675 | None:intergenic | 35.0% | |
| AAATCCAGCTCCTTGTAATT+TGG | - | chr3.2:51652645-51652664 | MS.gene05688:intron | 35.0% | |
| AACAAGATACAGAGAGAAGA+CGG | + | chr3.2:51650214-51650233 | None:intergenic | 35.0% | |
| AACTTCATAACTGGGTACTT+TGG | - | chr3.2:51649541-51649560 | MS.gene05688:intron | 35.0% | |
| AATACCACGTTAGTATGTTC+GGG | - | chr3.2:51650825-51650844 | MS.gene05688:CDS | 35.0% | |
| ACACTAAGGAAGTAAACTGT+AGG | - | chr3.2:51652739-51652758 | MS.gene05688:intron | 35.0% | |
| ACAGTTTACTTCCTTAGTGT+GGG | + | chr3.2:51652739-51652758 | None:intergenic | 35.0% | |
| ACCAGAAGATAAGAACGAAT+AGG | - | chr3.2:51650146-51650165 | MS.gene05688:intron | 35.0% | |
| ACCGATACCATACAATATTC+TGG | - | chr3.2:51650353-51650372 | MS.gene05688:intron | 35.0% | |
| ACTACATGTTCGTTGTGAAA+AGG | - | chr3.2:51652370-51652389 | MS.gene05688:intron | 35.0% | |
| ACTCCTTGTATAGAAAAGGT+TGG | - | chr3.2:51652267-51652286 | MS.gene05688:intron | 35.0% | |
| AGAAAAGAAACACAGAGAAG+GGG | + | chr3.2:51652709-51652728 | None:intergenic | 35.0% | |
| AGTGTCTTGATTGTTTGTCT+CGG | - | chr3.2:51654014-51654033 | MS.gene05688:intron | 35.0% | |
| ATAATAGCTAAACTTGGACC+TGG | - | chr3.2:51652673-51652692 | MS.gene05688:intron | 35.0% | |
| ATCACAGAAAACAAAATGGG+GGG | + | chr3.2:51650558-51650577 | None:intergenic | 35.0% | |
| CAATCATGTAAGTGTTAGTG+TGG | + | chr3.2:51652171-51652190 | None:intergenic | 35.0% | |
| CATCACAGAAAACAAAATGG+GGG | + | chr3.2:51650559-51650578 | None:intergenic | 35.0% | |
| CCTGGATATTCAAATAGATC+GGG | + | chr3.2:51652140-51652159 | None:intergenic | 35.0% | |
| CGAATAGGCTAATACAAATG+TGG | - | chr3.2:51650161-51650180 | MS.gene05688:intron | 35.0% | |
| CTACATGTTCGTTGTGAAAA+GGG | - | chr3.2:51652371-51652390 | MS.gene05688:intron | 35.0% | |
| CTTCAGTAAATAGCACATCA+GGG | + | chr3.2:51654212-51654231 | None:intergenic | 35.0% | |
| GAAAGATGTTAAGGATGAGT+TGG | - | chr3.2:51653433-51653452 | MS.gene05688:intron | 35.0% | |
| GATGAACAAGAACAAAATGG+AGG | - | chr3.2:51649267-51649286 | MS.gene05688:CDS | 35.0% | |
| GTTAGTGTGGATATAAAACC+TGG | + | chr3.2:51652158-51652177 | None:intergenic | 35.0% | |
| TACAGTTTACTTCCTTAGTG+TGG | + | chr3.2:51652740-51652759 | None:intergenic | 35.0% | |
| TATATGTTATTCCCTACCTC+GGG | + | chr3.2:51653320-51653339 | None:intergenic | 35.0% | |
| TGTAACATGTTATGCATAGC+AGG | + | chr3.2:51651824-51651843 | None:intergenic | 35.0% | |
| TGTAAGATATTTCAAGGGGT+TGG | + | chr3.2:51654136-51654155 | None:intergenic | 35.0% | |
| TGTACTCACGAAAGATGTTA+AGG | - | chr3.2:51653424-51653443 | MS.gene05688:intron | 35.0% | |
| TGTTGGAGATAGATTTAGCT+TGG | + | chr3.2:51652882-51652901 | None:intergenic | 35.0% | |
| TTCAGTAAATAGCACATCAG+GGG | + | chr3.2:51654211-51654230 | None:intergenic | 35.0% | |
| TTTCACAACGAACATGTAGT+TGG | + | chr3.2:51652370-51652389 | None:intergenic | 35.0% | |
| ! | AACTTCCAGTTTTCTATAGG+AGG | + | chr3.2:51653161-51653180 | None:intergenic | 35.0% |
| ! | ATTACAAGGAGCTGGATTTT+TGG | + | chr3.2:51652644-51652663 | None:intergenic | 35.0% |
| ! | CATTAATCTTGATAGCCTGT+TGG | + | chr3.2:51652826-51652845 | None:intergenic | 35.0% |
| ! | CTTTTCATTGTTTTCACCTC+TGG | + | chr3.2:51652333-51652352 | None:intergenic | 35.0% |
| ! | GAGAATTCTTCGAAAAGCAT+TGG | + | chr3.2:51650510-51650529 | None:intergenic | 35.0% |
| !! | ATAATATGCGTGTTGTTTGG+TGG | - | chr3.2:51652242-51652261 | MS.gene05688:intron | 35.0% |
| !! | ATTTTGGCCTTTTATTGAGG+TGG | - | chr3.2:51650766-51650785 | MS.gene05688:intron | 35.0% |
| !! | CGATTTTGACAACCATGAAT+AGG | + | chr3.2:51651070-51651089 | None:intergenic | 35.0% |
| !! | GAATTTTGTGAAGGTATAGG+TGG | - | chr3.2:51652928-51652947 | MS.gene05688:intron | 35.0% |
| !! | GCTGGATTTTTGGAGAATTT+AGG | + | chr3.2:51652634-51652653 | None:intergenic | 35.0% |
| !! | TAGGAGTTGATAACAGTGTA+CGG | - | chr3.2:51650390-51650409 | MS.gene05688:intron | 35.0% |
| !! | TGTTTTGAACAATGATGGTG+AGG | - | chr3.2:51653567-51653586 | MS.gene05688:intron | 35.0% |
| !! | TTTCGCTGATTTGATTGTTG+TGG | - | chr3.2:51653677-51653696 | MS.gene05688:intron | 35.0% |
| !!! | GTCGTAAATGTTTTTGGTGT+TGG | + | chr3.2:51652592-51652611 | None:intergenic | 35.0% |
| !!! | TTCGTTTTTTTGGGACTTGT+TGG | + | chr3.2:51651409-51651428 | None:intergenic | 35.0% |
| AAAAGAAACACAGAGAAGGG+GGG | + | chr3.2:51652707-51652726 | None:intergenic | 40.0% | |
| ACATCCAAATTACAAGGAGC+TGG | + | chr3.2:51652652-51652671 | None:intergenic | 40.0% | |
| ACCACTTCCACCTCAATAAA+AGG | + | chr3.2:51650776-51650795 | None:intergenic | 40.0% | |
| ACTCTTTCAATAGCCATGGT+TGG | + | chr3.2:51652038-51652057 | None:intergenic | 40.0% | |
| ACTGTAGGTCTAATGAACTC+AGG | - | chr3.2:51652754-51652773 | MS.gene05688:intron | 40.0% | |
| AGATCCCACTAAAGATCGTT+GGG | - | chr3.2:51651090-51651109 | MS.gene05688:intron | 40.0% | |
| AGTGATTTACCAGTAAGACG+AGG | + | chr3.2:51652401-51652420 | None:intergenic | 40.0% | |
| ATACCCCAACGATCTTTAGT+GGG | + | chr3.2:51651097-51651116 | None:intergenic | 40.0% | |
| ATCGCAAGATCGTATGATCT+TGG | - | chr3.2:51651684-51651703 | MS.gene05688:intron | 40.0% | |
| CAAAGCATACACAGATGTCA+GGG | + | chr3.2:51653388-51653407 | None:intergenic | 40.0% | |
| CAAGAACAAAATGGAGGAAG+AGG | - | chr3.2:51649273-51649292 | MS.gene05688:CDS | 40.0% | |
| CAGAGAGAAGACGGAAATAA+AGG | + | chr3.2:51650205-51650224 | None:intergenic | 40.0% | |
| CAGCTATTTAACTCCTTGTC+TGG | - | chr3.2:51652467-51652486 | MS.gene05688:intron | 40.0% | |
| CATGTCCTCCTATAGAAAAC+TGG | - | chr3.2:51653153-51653172 | MS.gene05688:intron | 40.0% | |
| CCCGATCTATTTGAATATCC+AGG | - | chr3.2:51652137-51652156 | MS.gene05688:intron | 40.0% | |
| GAAAAGAAACACAGAGAAGG+GGG | + | chr3.2:51652708-51652727 | None:intergenic | 40.0% | |
| GAACTCAGGAACTAGAAAAC+AGG | - | chr3.2:51652768-51652787 | MS.gene05688:intron | 40.0% | |
| GAAGTTCTTTCCCATAGACT+GGG | - | chr3.2:51652092-51652111 | MS.gene05688:intron | 40.0% | |
| GACATGGAGTTTGACATGAT+TGG | - | chr3.2:51650467-51650486 | MS.gene05688:intron | 40.0% | |
| GCCTATTCGTTCTTATCTTC+TGG | + | chr3.2:51650150-51650169 | None:intergenic | 40.0% | |
| GCTTCAGTAAATAGCACATC+AGG | + | chr3.2:51654213-51654232 | None:intergenic | 40.0% | |
| GGACACTCCTTGTATAGAAA+AGG | - | chr3.2:51652263-51652282 | MS.gene05688:intron | 40.0% | |
| GTGTAGTTTAAGCCTAATGG+CGG | - | chr3.2:51651962-51651981 | MS.gene05688:intron | 40.0% | |
| GTTTATTTGGGCTTGTGAGA+CGG | + | chr3.2:51650047-51650066 | None:intergenic | 40.0% | |
| TACTGAAGCTGTGAAGATTC+TGG | - | chr3.2:51654224-51654243 | MS.gene05688:CDS | 40.0% | |
| TAGATCGTAGGATCGTAACA+AGG | - | chr3.2:51651127-51651146 | MS.gene05688:CDS | 40.0% | |
| TAGGGAATGCATAAGAGAAG+CGG | - | chr3.2:51653755-51653774 | MS.gene05688:intron | 40.0% | |
| TATACCCCAACGATCTTTAG+TGG | + | chr3.2:51651098-51651117 | None:intergenic | 40.0% | |
| TCAGTAAATAGCACATCAGG+GGG | + | chr3.2:51654210-51654229 | None:intergenic | 40.0% | |
| TCATAACTGGGTACTTTGGA+AGG | - | chr3.2:51649545-51649564 | MS.gene05688:intron | 40.0% | |
| TCGAAGAATTCTCATAGCAG+AGG | - | chr3.2:51650517-51650536 | MS.gene05688:intron | 40.0% | |
| TCGCAAGATCGTATGATCTT+GGG | - | chr3.2:51651685-51651704 | MS.gene05688:intron | 40.0% | |
| TGAAATCAGATACGCTGAAG+TGG | - | chr3.2:51652515-51652534 | MS.gene05688:intron | 40.0% | |
| TGAAGATGAATCGATGGCAT+CGG | - | chr3.2:51649239-51649258 | MS.gene05688:CDS | 40.0% | |
| TGGTCAAAACACTCGTATCA+AGG | + | chr3.2:51653112-51653131 | None:intergenic | 40.0% | |
| TTCTATTACCACCCACACTA+AGG | - | chr3.2:51652725-51652744 | MS.gene05688:intron | 40.0% | |
| TTGACAACCATGAATAGGAC+TGG | + | chr3.2:51651065-51651084 | None:intergenic | 40.0% | |
| TTGATTGTTGTGGTGTGCAT+AGG | - | chr3.2:51653687-51653706 | MS.gene05688:intron | 40.0% | |
| TTGGTAAGACACATGCGAAA+TGG | - | chr3.2:51653261-51653280 | MS.gene05688:intron | 40.0% | |
| ! | ATAGAAAGAGCGTAGATCGT+AGG | - | chr3.2:51651115-51651134 | MS.gene05688:CDS | 40.0% |
| ! | TTCTGCGATGGTTTTCAACT+CGG | + | chr3.2:51651557-51651576 | None:intergenic | 40.0% |
| ! | TTTGTGAAGGTATAGGTGGA+CGG | - | chr3.2:51652932-51652951 | MS.gene05688:intron | 40.0% |
| !! | AGATTTAGCTTGGTAGAGCT+AGG | + | chr3.2:51652872-51652891 | None:intergenic | 40.0% |
| !! | AGTTGATAACAGTGTACGGT+TGG | - | chr3.2:51650394-51650413 | MS.gene05688:intron | 40.0% |
| !! | ATGAGAACTGAGAAGTGTTC+AGG | - | chr3.2:51651265-51651284 | MS.gene05688:intron | 40.0% |
| !! | GAAGCTGTTTTCAACCTATG+TGG | + | chr3.2:51650082-51650101 | None:intergenic | 40.0% |
| !! | GATCGCGATTTTAACAACCT+TGG | - | chr3.2:51651713-51651732 | MS.gene05688:intron | 40.0% |
| !! | TTTGCACGTTGACTTCAAGT+CGG | - | chr3.2:51651875-51651894 | MS.gene05688:intron | 40.0% |
| !!! | TTGGCCTTTTCAAGTGGAAA+CGG | - | chr3.2:51651443-51651462 | MS.gene05688:CDS | 40.0% |
| AAAGCGGTAGATCGCAGAAT+CGG | + | chr3.2:51651594-51651613 | None:intergenic | 45.0% | |
| AATACACCCGCATAGACTCA+TGG | + | chr3.2:51653078-51653097 | None:intergenic | 45.0% | |
| ACAACCTTGGTCCTATTGCA+TGG | - | chr3.2:51651726-51651745 | MS.gene05688:intron | 45.0% | |
| ACAGAAAACAAAATGGGGGG+TGG | + | chr3.2:51650555-51650574 | None:intergenic | 45.0% | |
| AGACCCGTTTCCACTTGAAA+AGG | + | chr3.2:51651450-51651469 | None:intergenic | 45.0% | |
| AGGAATGAGACCCAGTCTAT+GGG | + | chr3.2:51652105-51652124 | None:intergenic | 45.0% | |
| ATACGATCTTGCGATTCCGA+TGG | + | chr3.2:51651679-51651698 | None:intergenic | 45.0% | |
| ATCTCAAGCTCCCATCTCTT+TGG | - | chr3.2:51653643-51653662 | MS.gene05688:intron | 45.0% | |
| CAGCATGGATTTGAACGGTT+CGG | + | chr3.2:51651481-51651500 | None:intergenic | 45.0% | |
| CATAGGCAGAAAAAAGGCTG+TGG | - | chr3.2:51653704-51653723 | MS.gene05688:intron | 45.0% | |
| CATTCCCGAACATACTAACG+TGG | + | chr3.2:51650832-51650851 | None:intergenic | 45.0% | |
| CGAAGTTCTTTCCCATAGAC+TGG | - | chr3.2:51652091-51652110 | MS.gene05688:intron | 45.0% | |
| GAGATCCCACTAAAGATCGT+TGG | - | chr3.2:51651089-51651108 | MS.gene05688:intron | 45.0% | |
| GATCCCACTAAAGATCGTTG+GGG | - | chr3.2:51651091-51651110 | MS.gene05688:intron | 45.0% | |
| GCAAAGCATACACAGATGTC+AGG | + | chr3.2:51653389-51653408 | None:intergenic | 45.0% | |
| GGCATCTGCATAAACTCAAC+TGG | + | chr3.2:51653057-51653076 | None:intergenic | 45.0% | |
| GGTAAAGCCGTAAAGCCATT+GGG | + | chr3.2:51653036-51653055 | None:intergenic | 45.0% | |
| GGTGTGCATAGGCAGAAAAA+AGG | - | chr3.2:51653698-51653717 | MS.gene05688:intron | 45.0% | |
| GGTTGAAGTGAAACGCATCA+CGG | - | chr3.2:51650439-51650458 | MS.gene05688:intron | 45.0% | |
| GTAAAGCCGTAAAGCCATTG+GGG | + | chr3.2:51653035-51653054 | None:intergenic | 45.0% | |
| GTCGTCTGAAGATGAATCGA+TGG | - | chr3.2:51649233-51649252 | MS.gene05688:CDS | 45.0% | |
| GTTTACTTCCTTAGTGTGGG+TGG | + | chr3.2:51652736-51652755 | None:intergenic | 45.0% | |
| TAAAGCCGTAAAGCCATTGG+GGG | + | chr3.2:51653034-51653053 | None:intergenic | 45.0% | |
| TAGGAATGAGACCCAGTCTA+TGG | + | chr3.2:51652106-51652125 | None:intergenic | 45.0% | |
| TATCCCTCTCTCCATGCAAT+AGG | + | chr3.2:51651740-51651759 | None:intergenic | 45.0% | |
| TCTGGTGCTTATGCAGCATT+AGG | - | chr3.2:51650371-51650390 | MS.gene05688:intron | 45.0% | |
| TGCATAAGAGAAGCGGAAGA+AGG | - | chr3.2:51653762-51653781 | MS.gene05688:intron | 45.0% | |
| TGCCTATCAGCTGCAAAACA+GGG | + | chr3.2:51649864-51649883 | None:intergenic | 45.0% | |
| TGGTAAAGCCGTAAAGCCAT+TGG | + | chr3.2:51653037-51653056 | None:intergenic | 45.0% | |
| TGTGTTAAGTACTCCCCCAA+TGG | - | chr3.2:51653018-51653037 | MS.gene05688:CDS | 45.0% | |
| ! | GCCTTTTATTGAGGTGGAAG+TGG | - | chr3.2:51650772-51650791 | MS.gene05688:intron | 45.0% |
| ! | TCTGCGATGGTTTTCAACTC+GGG | + | chr3.2:51651556-51651575 | None:intergenic | 45.0% |
| !! | CAGGAGTAGTTCTAGTATGC+GGG | + | chr3.2:51651805-51651824 | None:intergenic | 45.0% |
| !! | GCAGGAGTAGTTCTAGTATG+CGG | + | chr3.2:51651806-51651825 | None:intergenic | 45.0% |
| !!! | TGGCCTTTTCAAGTGGAAAC+GGG | - | chr3.2:51651444-51651463 | MS.gene05688:CDS | 45.0% |
| !! | AAAAAAAAAGTAAAATTTAA+AGG | + | chr3.2:51649475-51649494 | None:intergenic | 5.0% |
| AAGCGGAAGAAGGCGAAGAA+GGG | - | chr3.2:51653772-51653791 | MS.gene05688:intron | 50.0% | |
| AAGGGGGAGAAGGGGAAAAA+TGG | - | chr3.2:51653790-51653809 | MS.gene05688:intron | 50.0% | |
| AAGGGTCAACCTCGTCTTAC+TGG | - | chr3.2:51652389-51652408 | MS.gene05688:intron | 50.0% | |
| ACGCATCACGGATGAAGACA+TGG | - | chr3.2:51650451-51650470 | MS.gene05688:intron | 50.0% | |
| AGCTAAACTTGGACCTGGTC+AGG | - | chr3.2:51652678-51652697 | MS.gene05688:intron | 50.0% | |
| ATCGAATGCTTCCCGAGGTA+GGG | - | chr3.2:51653306-51653325 | MS.gene05688:intron | 50.0% | |
| ATCTTCAACCCGCTCCAGAT+CGG | - | chr3.2:51651647-51651666 | MS.gene05688:intron | 50.0% | |
| CAGATGCCATGAGTCTATGC+GGG | - | chr3.2:51653069-51653088 | MS.gene05688:CDS | 50.0% | |
| CCGTCCAGCATGGATTTGAA+CGG | + | chr3.2:51651486-51651505 | None:intergenic | 50.0% | |
| CCGTTCAAATCCATGCTGGA+CGG | - | chr3.2:51651483-51651502 | MS.gene05688:intron | 50.0% | |
| CGAACCGTTCAAATCCATGC+TGG | - | chr3.2:51651479-51651498 | MS.gene05688:intron | 50.0% | |
| CGATACCAAGCAGTAGCAAC+CGG | + | chr3.2:51653290-51653309 | None:intergenic | 50.0% | |
| CTCTCCATGCAATAGGACCA+AGG | + | chr3.2:51651733-51651752 | None:intergenic | 50.0% | |
| CTTGAAGCTCACGCTGTCAA+AGG | - | chr3.2:51653236-51653255 | MS.gene05688:intron | 50.0% | |
| GACACATGCGAAATGGTCTC+CGG | - | chr3.2:51653268-51653287 | MS.gene05688:intron | 50.0% | |
| GAGGAGTCCAGTCCTATTCA+TGG | - | chr3.2:51651055-51651074 | MS.gene05688:intron | 50.0% | |
| GCAATAAGCTCACTCCCTTG+AGG | + | chr3.2:51652544-51652563 | None:intergenic | 50.0% | |
| GCAGATGCCATGAGTCTATG+CGG | - | chr3.2:51653068-51653087 | MS.gene05688:CDS | 50.0% | |
| GGGAGTGAGCTTATTGCTGA+AGG | - | chr3.2:51652547-51652566 | MS.gene05688:intron | 50.0% | |
| GGGTTGAAGATCGGAAACGA+CGG | + | chr3.2:51651638-51651657 | None:intergenic | 50.0% | |
| GGTCCTATTGCATGGAGAGA+GGG | - | chr3.2:51651734-51651753 | MS.gene05688:intron | 50.0% | |
| GTGCCTATCAGCTGCAAAAC+AGG | + | chr3.2:51649865-51649884 | None:intergenic | 50.0% | |
| TATCGAATGCTTCCCGAGGT+AGG | - | chr3.2:51653305-51653324 | MS.gene05688:intron | 50.0% | |
| TGAATAGGACTGGACTCCTC+TGG | + | chr3.2:51651055-51651074 | None:intergenic | 50.0% | |
| TGGTCCTATTGCATGGAGAG+AGG | - | chr3.2:51651733-51651752 | MS.gene05688:intron | 50.0% | |
| TGTTGGATCGGCAGCTGATT+TGG | + | chr3.2:51652575-51652594 | None:intergenic | 50.0% | |
| TTGAAGATCGGAAACGACGG+CGG | + | chr3.2:51651635-51651654 | None:intergenic | 50.0% | |
| TTGGGCTTGTGAGACGGTTT+GGG | + | chr3.2:51650041-51650060 | None:intergenic | 50.0% | |
| TTTGGGCTTGTGAGACGGTT+TGG | + | chr3.2:51650042-51650061 | None:intergenic | 50.0% | |
| ! | CTTCTCTGCGTTTTCTGCGA+TGG | + | chr3.2:51651569-51651588 | None:intergenic | 50.0% |
| ! | GTACTCCCCCAATGGCTTTA+CGG | - | chr3.2:51653026-51653045 | MS.gene05688:CDS | 50.0% |
| ! | TTGGTATCGAATGCTTCCCG+AGG | - | chr3.2:51653301-51653320 | MS.gene05688:intron | 50.0% |
| !! | AGATGAGTGGGAAGCGTTGA+AGG | + | chr3.2:51649333-51649352 | None:intergenic | 50.0% |
| !! | ATCTGGAGCGGGTTGAAGAT+CGG | + | chr3.2:51651647-51651666 | None:intergenic | 50.0% |
| !! | CGAAAAGCATTGGCAACTGC+TGG | + | chr3.2:51650500-51650519 | None:intergenic | 50.0% |
| AAGGCGAAGAAGGGGGAGAA+GGG | - | chr3.2:51653781-51653800 | MS.gene05688:intron | 55.0% | |
| ACGCTGAAGTGGTTGCCTCA+AGG | - | chr3.2:51652526-51652545 | MS.gene05688:intron | 55.0% | |
| AGATCGGGATCAGCAGCGAT+AGG | + | chr3.2:51652125-51652144 | None:intergenic | 55.0% | |
| AGCGGAAGAAGGCGAAGAAG+GGG | - | chr3.2:51653773-51653792 | MS.gene05688:intron | 55.0% | |
| CGCTGAAGTGGTTGCCTCAA+GGG | - | chr3.2:51652527-51652546 | MS.gene05688:intron | 55.0% | |
| GAAGCGGAAGAAGGCGAAGA+AGG | - | chr3.2:51653771-51653790 | MS.gene05688:intron | 55.0% | |
| GCGAGCATGCACTCTGTGTA+GGG | - | chr3.2:51653737-51653756 | MS.gene05688:intron | 55.0% | |
| GGTCAAACCCGAGTCGGATT+GGG | - | chr3.2:51651511-51651530 | MS.gene05688:intron | 55.0% | |
| TGGTCAAACCCGAGTCGGAT+TGG | - | chr3.2:51651510-51651529 | MS.gene05688:intron | 55.0% | |
| ! | AAACCCGAGTCGGATTGGGT+CGG | - | chr3.2:51651515-51651534 | MS.gene05688:intron | 55.0% |
| ! | GCTCACGCTGTCAAAGGCAT+TGG | - | chr3.2:51653242-51653261 | MS.gene05688:intron | 55.0% |
| ! | GGCCCTGTTTTGCAGCTGAT+AGG | - | chr3.2:51649859-51649878 | MS.gene05688:intron | 55.0% |
| !! | AATCCGACTCGGGTTTGACC+AGG | + | chr3.2:51651511-51651530 | None:intergenic | 55.0% |
| AATCCATGCTGGACGGAGCC+TGG | - | chr3.2:51651490-51651509 | MS.gene05688:intron | 60.0% | |
| AGAAGGGGGGTTACCTGACC+AGG | + | chr3.2:51652694-51652713 | None:intergenic | 60.0% | |
| AGGCGAAGAAGGGGGAGAAG+GGG | - | chr3.2:51653782-51653801 | MS.gene05688:intron | 60.0% | |
| CGCGAGCATGCACTCTGTGT+AGG | - | chr3.2:51653736-51653755 | MS.gene05688:intron | 60.0% | |
| GAAGGCGAAGAAGGGGGAGA+AGG | - | chr3.2:51653780-51653799 | MS.gene05688:intron | 60.0% | |
| GAGCCTGGTCAAACCCGAGT+CGG | - | chr3.2:51651505-51651524 | MS.gene05688:intron | 60.0% | |
| GCGGAAGAAGGCGAAGAAGG+GGG | - | chr3.2:51653774-51653793 | MS.gene05688:intron | 60.0% | |
| GGTCTCCGGTTGCTACTGCT+TGG | - | chr3.2:51653282-51653301 | MS.gene05688:intron | 60.0% | |
| TGACCCGACCCAATCCGACT+CGG | + | chr3.2:51651522-51651541 | None:intergenic | 60.0% | |
| TTCAACCCGCTCCAGATCGG+TGG | - | chr3.2:51651650-51651669 | MS.gene05688:intron | 60.0% | |
| ! | AACCCGAGTCGGATTGGGTC+GGG | - | chr3.2:51651516-51651535 | MS.gene05688:intron | 60.0% |
| ! | TCCAGATCGGTGGTGGCCAT+CGG | - | chr3.2:51651660-51651679 | MS.gene05688:intron | 60.0% |
| AACCCGCTCCAGATCGGTGG+TGG | - | chr3.2:51651653-51651672 | MS.gene05688:intron | 65.0% | |
| GACCCGACCCAATCCGACTC+GGG | + | chr3.2:51651521-51651540 | None:intergenic | 65.0% | |
| GATCGGAAACGACGGCGGAG+CGG | + | chr3.2:51651630-51651649 | None:intergenic | 65.0% | |
| TCCGATGGCCACCACCGATC+TGG | + | chr3.2:51651664-51651683 | None:intergenic | 65.0% | |
| TGACCAGGCTCCGTCCAGCA+TGG | + | chr3.2:51651496-51651515 | None:intergenic | 65.0% | |
| TGGCCACCACCGATCTGGAG+CGG | + | chr3.2:51651659-51651678 | None:intergenic | 65.0% | |
| CGGACGGCGCGCAGGAAAAG+CGG | + | chr3.2:51651610-51651629 | None:intergenic | 70.0% | |
| GGAAACGACGGCGGAGCGGA+CGG | + | chr3.2:51651626-51651645 | None:intergenic | 70.0% | |
| ! | GGCCACCACCGATCTGGAGC+GGG | + | chr3.2:51651658-51651677 | None:intergenic | 70.0% |
| ! | CGGCGGAGCGGACGGCGCGC+AGG | + | chr3.2:51651618-51651637 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 51649228 | 51654284 | 51649228 | ID=MS.gene05688 |
| chr3.2 | mRNA | 51649228 | 51654284 | 51649228 | ID=MS.gene05688.t1;Parent=MS.gene05688 |
| chr3.2 | exon | 51654141 | 51654284 | 51654141 | ID=MS.gene05688.t1.exon1;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51654141 | 51654284 | 51654141 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51652974 | 51653159 | 51652974 | ID=MS.gene05688.t1.exon2;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51652974 | 51653159 | 51652974 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51651354 | 51651480 | 51651354 | ID=MS.gene05688.t1.exon3;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51651354 | 51651480 | 51651354 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51651102 | 51651188 | 51651102 | ID=MS.gene05688.t1.exon4;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51651102 | 51651188 | 51651102 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51650813 | 51650997 | 51650813 | ID=MS.gene05688.t1.exon5;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51650813 | 51650997 | 51650813 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51650190 | 51650285 | 51650190 | ID=MS.gene05688.t1.exon6;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51650190 | 51650285 | 51650190 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51649997 | 51650090 | 51649997 | ID=MS.gene05688.t1.exon7;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51649997 | 51650090 | 51649997 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51649657 | 51649803 | 51649657 | ID=MS.gene05688.t1.exon8;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51649657 | 51649803 | 51649657 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| chr3.2 | exon | 51649228 | 51649331 | 51649228 | ID=MS.gene05688.t1.exon9;Parent=MS.gene05688.t1 |
| chr3.2 | CDS | 51649228 | 51649331 | 51649228 | ID=cds.MS.gene05688.t1;Parent=MS.gene05688.t1 |
| Gene Sequence |
| Protein sequence |
