Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022098.t1 | XP_024633786.1 | 98.6 | 69 | 1 | 0 | 26 | 94 | 35 | 103 | 2.00E-31 | 145.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022098.t1 | P0DPB6 | 43.5 | 69 | 38 | 1 | 26 | 93 | 63 | 131 | 7.3e-11 | 68.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022098.t1 | G7KSV3 | 98.6 | 69 | 1 | 0 | 26 | 94 | 35 | 103 | 1.4e-31 | 145.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022098.t1 | MTR_7g020830 | 84.043 | 94 | 1 | 1 | 26 | 119 | 35 | 114 | 8.85e-52 | 159 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022098.t1 | AT2G29540 | 59.701 | 67 | 27 | 0 | 18 | 84 | 27 | 93 | 7.87e-25 | 91.7 |
MS.gene022098.t1 | AT2G29540 | 59.701 | 67 | 27 | 0 | 18 | 84 | 27 | 93 | 7.87e-25 | 91.7 |
MS.gene022098.t1 | AT2G29540 | 65.000 | 60 | 21 | 0 | 25 | 84 | 51 | 110 | 1.19e-23 | 89.0 |
Find 20 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGCATGTTAGGAGCACTTT+TGG | 0.284863 | 7.1:-77494263 | MS.gene022098:CDS |
ACTGCTTCCAACAGACTTGC+TGG | 0.364194 | 7.1:+77494175 | None:intergenic |
AGTGCTTCTAACAGACTTGC+TGG | 0.397112 | 7.1:+77494217 | None:intergenic |
GTTACCACTTACCAGTTGTC+TGG | 0.401383 | 7.1:+77495391 | None:intergenic |
TAGTGAGTCGGATGATGATA+TGG | 0.429703 | 7.1:-77494138 | MS.gene022098:CDS |
TGCTTATGTGCAAGCATGTT+AGG | 0.455656 | 7.1:-77494274 | MS.gene022098:CDS |
GCTTCGACTTCACTCTGGTT+CGG | 0.456842 | 7.1:+77496196 | None:intergenic |
TACCCACAAAATGTCACTCT+TGG | 0.463264 | 7.1:+77495456 | None:intergenic |
AATGTCAGAGTCCAGACAAC+TGG | 0.483345 | 7.1:-77495402 | MS.gene022098:intron |
GGTGTTAAAAGATGGTTGTC+AGG | 0.493371 | 7.1:-77494303 | MS.gene022098:CDS |
GTGAAGTCGAAGCACGGTTG+AGG | 0.513839 | 7.1:-77496186 | MS.gene022098:CDS |
GCAAGTGAGGTGTTAAAAGA+TGG | 0.554457 | 7.1:-77494311 | MS.gene022098:CDS |
ACCGTGCTTCGACTTCACTC+TGG | 0.557412 | 7.1:+77496191 | None:intergenic |
TGTTAGAAGCACTTCTGAGA+AGG | 0.562324 | 7.1:-77494207 | MS.gene022098:CDS |
GTTAAAACCAGCAAGTCTGT+TGG | 0.570443 | 7.1:-77494182 | MS.gene022098:CDS |
GAAGCACGGTTGAGGTGCTG+TGG | 0.595532 | 7.1:-77496178 | MS.gene022098:CDS |
TGTAGGGGATCCAGCAAGTG+AGG | 0.610245 | 7.1:-77494324 | MS.gene022098:intron |
ACCAGAGTGAAGTCGAAGCA+CGG | 0.622597 | 7.1:-77496192 | MS.gene022098:CDS |
TGAGAAGTCAGTTAGTGAGT+CGG | 0.628461 | 7.1:-77494150 | MS.gene022098:CDS |
TCTGGACTCTGACATTAACA+CGG | 0.671455 | 7.1:+77495409 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAAAAATAAAAAAAAA+AGG | - | chr7.1:77495317-77495336 | MS.gene022098:intron | 0.0% |
!! | TTGTTGTAAAAATAAAAAAA+TGG | + | chr7.1:77495189-77495208 | None:intergenic | 10.0% |
!! | ATAAAAATATTAAAAGGCAA+TGG | - | chr7.1:77495534-77495553 | MS.gene022098:intron | 15.0% |
!! | TTAACTAACTTAAAAAAGTT+TGG | + | chr7.1:77495253-77495272 | None:intergenic | 15.0% |
!!! | AAAATCTACCTATTTTATAA+AGG | + | chr7.1:77495743-77495762 | None:intergenic | 15.0% |
!! | TTAAAACAAGTAACAAATAC+TGG | + | chr7.1:77495146-77495165 | None:intergenic | 20.0% |
!! | TTATAAATGTCTGTTTAACT+TGG | - | chr7.1:77494772-77494791 | MS.gene022098:intron | 20.0% |
!! | TTCATATAGAAATGAATTGT+AGG | - | chr7.1:77495443-77495462 | MS.gene022098:CDS | 20.0% |
!! | TTCTATTCAAAGCTAATAAT+AGG | + | chr7.1:77495229-77495248 | None:intergenic | 20.0% |
!!! | ATGTTCTAAATTATCTAAAC+AGG | - | chr7.1:77495278-77495297 | MS.gene022098:intron | 20.0% |
!!! | ATTCCATAATTTGTTTTTGA+GGG | - | chr7.1:77494342-77494361 | MS.gene022098:intron | 20.0% |
!!! | CGATATAAAAATGGAATTTT+CGG | + | chr7.1:77495054-77495073 | None:intergenic | 20.0% |
!!! | TCTAAATTTGTTCTCTTTTA+TGG | - | chr7.1:77495650-77495669 | MS.gene022098:intron | 20.0% |
! | AAAGAGAACAAATTTAGACA+TGG | + | chr7.1:77495648-77495667 | None:intergenic | 25.0% |
! | AGAAGATAAGAAAACTTCAT+TGG | + | chr7.1:77495403-77495422 | None:intergenic | 25.0% |
! | AGTAGCTTCCTTTATAAAAT+AGG | - | chr7.1:77495732-77495751 | MS.gene022098:intron | 25.0% |
! | ATAGAAATGAATTGTAGGTT+TGG | - | chr7.1:77495448-77495467 | MS.gene022098:CDS | 25.0% |
! | CTATTTCACTATAAACTATC+TGG | + | chr7.1:77495831-77495850 | None:intergenic | 25.0% |
! | GCTAAAAATGACAAGAATTA+AGG | + | chr7.1:77494842-77494861 | None:intergenic | 25.0% |
! | GCTATTCATTATATGTGAAT+TGG | - | chr7.1:77495679-77495698 | MS.gene022098:intron | 25.0% |
! | GGATATAATGCAACTTTAAT+TGG | - | chr7.1:77495005-77495024 | MS.gene022098:intron | 25.0% |
! | TGTCATAACAAAAAACAAAG+TGG | - | chr7.1:77494491-77494510 | MS.gene022098:intron | 25.0% |
! | TGTCTAGCAAAATATGAAAT+TGG | + | chr7.1:77495104-77495123 | None:intergenic | 25.0% |
! | TTCAAAGCTAATAATAGGAA+TGG | + | chr7.1:77495224-77495243 | None:intergenic | 25.0% |
! | TTGTGATTGCGATATAAAAA+TGG | + | chr7.1:77495063-77495082 | None:intergenic | 25.0% |
!! | AAAATGGAATTTTCGGTATT+AGG | + | chr7.1:77495047-77495066 | None:intergenic | 25.0% |
!! | ATCAGTAATTTTCCATTGAA+TGG | - | chr7.1:77495991-77496010 | MS.gene022098:intron | 25.0% |
!! | ATGAACTCTAAAAGGAAAAT+TGG | - | chr7.1:77495709-77495728 | MS.gene022098:intron | 25.0% |
!! | TCAGTAATTTTCCATTGAAT+GGG | - | chr7.1:77495992-77496011 | MS.gene022098:intron | 25.0% |
!!! | AATTGTTTTTGGATACATTG+TGG | + | chr7.1:77494600-77494619 | None:intergenic | 25.0% |
!!! | AGGTAGATTTTCATTTTTGT+TGG | - | chr7.1:77495752-77495771 | MS.gene022098:intron | 25.0% |
!!! | GATTCCATAATTTGTTTTTG+AGG | - | chr7.1:77494341-77494360 | MS.gene022098:intron | 25.0% |
!!! | GTTTTTTTATGTCGTGAATT+TGG | - | chr7.1:77494375-77494394 | MS.gene022098:intron | 25.0% |
!!! | TTCCATAATTTGTTTTTGAG+GGG | - | chr7.1:77494343-77494362 | MS.gene022098:intron | 25.0% |
AAACAAATTATGGAATCCGA+AGG | + | chr7.1:77494338-77494357 | None:intergenic | 30.0% | |
AAAGACTTTCGTTGTATTTG+TGG | - | chr7.1:77495938-77495957 | MS.gene022098:intron | 30.0% | |
AGTCTAACATTGATACTCTT+AGG | + | chr7.1:77494667-77494686 | None:intergenic | 30.0% | |
GATCAACAATGAACTCTAAA+AGG | - | chr7.1:77495701-77495720 | MS.gene022098:intron | 30.0% | |
TAATAACATGCACAATGGTT+TGG | + | chr7.1:77495877-77495896 | None:intergenic | 30.0% | |
TATATGCAGAAAAGTCTACA+AGG | + | chr7.1:77495609-77495628 | None:intergenic | 30.0% | |
! | ACAAATCTGAAGCACTAATA+AGG | - | chr7.1:77495797-77495816 | MS.gene022098:intron | 30.0% |
! | TTTTATGTCGTGAATTTGGT+AGG | - | chr7.1:77494379-77494398 | MS.gene022098:intron | 30.0% |
!! | AAAAAACAAAGTGGATTGTG+GGG | - | chr7.1:77494500-77494519 | MS.gene022098:intron | 30.0% |
!! | ACAAAAAACAAAGTGGATTG+TGG | - | chr7.1:77494498-77494517 | MS.gene022098:intron | 30.0% |
!! | CAAAAAACAAAGTGGATTGT+GGG | - | chr7.1:77494499-77494518 | MS.gene022098:intron | 30.0% |
!!! | GTTTTTTGTTATGACAACCA+AGG | + | chr7.1:77494487-77494506 | None:intergenic | 30.0% |
!!! | TTTTTGTTGGTTTAAACGTG+TGG | - | chr7.1:77495765-77495784 | MS.gene022098:intron | 30.0% |
AATTAAGGAAGAAGAGGAAG+AGG | + | chr7.1:77494827-77494846 | None:intergenic | 35.0% | |
ACTTAGATACATGTCCAACA+TGG | - | chr7.1:77494684-77494703 | MS.gene022098:intron | 35.0% | |
AGACAACAACAATTCTCATC+AGG | + | chr7.1:77494874-77494893 | None:intergenic | 35.0% | |
ATATCTCTCTGTATCTGTAG+GGG | - | chr7.1:77496017-77496036 | MS.gene022098:intron | 35.0% | |
CACCCCTCAAAAACAAATTA+TGG | + | chr7.1:77494348-77494367 | None:intergenic | 35.0% | |
CATATCTCTCTGTATCTGTA+GGG | - | chr7.1:77496016-77496035 | MS.gene022098:intron | 35.0% | |
CGTCATAATAACATGCACAA+TGG | + | chr7.1:77495882-77495901 | None:intergenic | 35.0% | |
CTAGCTATATACCTCCAAAA+TGG | + | chr7.1:77494719-77494738 | None:intergenic | 35.0% | |
GAAATGAATTGTAGGTTTGG+TGG | - | chr7.1:77495451-77495470 | MS.gene022098:CDS | 35.0% | |
GACAAGAATTAAGGAAGAAG+AGG | + | chr7.1:77494833-77494852 | None:intergenic | 35.0% | |
TCATATCTCTCTGTATCTGT+AGG | - | chr7.1:77496015-77496034 | MS.gene022098:intron | 35.0% | |
TGGATTGTGAATTACATGAC+TGG | - | chr7.1:77495579-77495598 | MS.gene022098:intron | 35.0% | |
TTTGTTTGTGTAGAGGTTTG+TGG | + | chr7.1:77494284-77494303 | None:intergenic | 35.0% | |
! | ACATTAACACGGTTTTCTGA+TGG | + | chr7.1:77494939-77494958 | None:intergenic | 35.0% |
! | CATTGGTTGAAGAGAATAGT+AGG | + | chr7.1:77495386-77495405 | None:intergenic | 35.0% |
!!! | TTTGTTTTTGAGGGGTGATT+TGG | - | chr7.1:77494351-77494370 | MS.gene022098:intron | 35.0% |
AATGGCCAAAGTTTCCATGT+TGG | + | chr7.1:77494701-77494720 | None:intergenic | 40.0% | |
CAACTGGTAAGTGGTAACAT+AGG | - | chr7.1:77494970-77494989 | MS.gene022098:intron | 40.0% | |
CATACGCAGGATCAAGAAAA+GGG | + | chr7.1:77494448-77494467 | None:intergenic | 40.0% | |
CATGTCCAACATGGAAACTT+TGG | - | chr7.1:77494693-77494712 | MS.gene022098:intron | 40.0% | |
GAGAGATATGACCCATTCAA+TGG | + | chr7.1:77496006-77496025 | None:intergenic | 40.0% | |
GATACATTGTGGATGCAAAG+TGG | + | chr7.1:77494589-77494608 | None:intergenic | 40.0% | |
GGTGTTAAAAGATGGTTGTC+AGG | - | chr7.1:77496053-77496072 | MS.gene022098:intron | 40.0% | |
GTTAAAACCAGCAAGTCTGT+TGG | - | chr7.1:77496174-77496193 | MS.gene022098:intron | 40.0% | |
TAACATAGGCTGTCTCATGT+TGG | - | chr7.1:77494984-77495003 | MS.gene022098:intron | 40.0% | |
TACCCACAAAATGTCACTCT+TGG | + | chr7.1:77494903-77494922 | None:intergenic | 40.0% | |
TAGTGAGTCGGATGATGATA+TGG | - | chr7.1:77496218-77496237 | MS.gene022098:CDS | 40.0% | |
TCATACGCAGGATCAAGAAA+AGG | + | chr7.1:77494449-77494468 | None:intergenic | 40.0% | |
TCTGGACTCTGACATTAACA+CGG | + | chr7.1:77494950-77494969 | None:intergenic | 40.0% | |
TGAGAAGTCAGTTAGTGAGT+CGG | - | chr7.1:77496206-77496225 | MS.gene022098:CDS | 40.0% | |
TGCTTATGTGCAAGCATGTT+AGG | - | chr7.1:77496082-77496101 | MS.gene022098:intron | 40.0% | |
! | AGTCCAAGAGTGACATTTTG+TGG | - | chr7.1:77494897-77494916 | MS.gene022098:intron | 40.0% |
! | CATGGAAACTTTGGCCATTT+TGG | - | chr7.1:77494702-77494721 | MS.gene022098:intron | 40.0% |
! | GAATTTTCGGTATTAGGCTC+TGG | + | chr7.1:77495041-77495060 | None:intergenic | 40.0% |
! | GCAAGTGAGGTGTTAAAAGA+TGG | - | chr7.1:77496045-77496064 | MS.gene022098:intron | 40.0% |
! | GTCCAAGAGTGACATTTTGT+GGG | - | chr7.1:77494898-77494917 | MS.gene022098:intron | 40.0% |
! | TCTTTTAACACCTCACTTGC+TGG | + | chr7.1:77496045-77496064 | None:intergenic | 40.0% |
!! | TGGGGCTTCTTTTTGTTTAC+CGG | - | chr7.1:77494518-77494537 | MS.gene022098:intron | 40.0% |
!! | TGTTAGAAGCACTTCTGAGA+AGG | - | chr7.1:77496149-77496168 | MS.gene022098:intron | 40.0% |
!!! | AAGCATGTTAGGAGCACTTT+TGG | - | chr7.1:77496093-77496112 | MS.gene022098:intron | 40.0% |
!!! | AGCATGTTAGGAGCACTTTT+GGG | - | chr7.1:77496094-77496113 | MS.gene022098:intron | 40.0% |
!!! | TTTTTGAGTGTGTGGAGTGT+TGG | + | chr7.1:77494258-77494277 | None:intergenic | 40.0% |
AAGGAAGAAGAGGAAGAGGT+TGG | + | chr7.1:77494823-77494842 | None:intergenic | 45.0% | |
AATGTCAGAGTCCAGACAAC+TGG | - | chr7.1:77494954-77494973 | MS.gene022098:intron | 45.0% | |
ACAGAATCGAGATCATACGC+AGG | + | chr7.1:77494461-77494480 | None:intergenic | 45.0% | |
AGGAAGAAGAGGAAGAGGTT+GGG | + | chr7.1:77494822-77494841 | None:intergenic | 45.0% | |
AGTGCTTCTAACAGACTTGC+TGG | + | chr7.1:77496142-77496161 | None:intergenic | 45.0% | |
ATTGTGGATGCAAAGTGGCA+TGG | + | chr7.1:77494584-77494603 | None:intergenic | 45.0% | |
CACAATCCAGCACATACTTG+TGG | + | chr7.1:77495568-77495587 | None:intergenic | 45.0% | |
GATCTCGATTCTGTCTACCT+TGG | - | chr7.1:77494467-77494486 | MS.gene022098:intron | 45.0% | |
GTTACCACTTACCAGTTGTC+TGG | + | chr7.1:77494968-77494987 | None:intergenic | 45.0% | |
TCGAAAACAATCACCTACCG+AGG | - | chr7.1:77494308-77494327 | MS.gene022098:CDS | 45.0% | |
!! | ACACGGTTTTCTGATGGATG+AGG | + | chr7.1:77494933-77494952 | None:intergenic | 45.0% |
!! | CACGGTTTTCTGATGGATGA+GGG | + | chr7.1:77494932-77494951 | None:intergenic | 45.0% |
!! | CGACAGCTTTGTTTGTGTAG+AGG | + | chr7.1:77494291-77494310 | None:intergenic | 45.0% |
!! | CTTCTTTTTGTTTACCGGGG+GGG | - | chr7.1:77494523-77494542 | MS.gene022098:intron | 45.0% |
!! | GCTTCTTTTTGTTTACCGGG+GGG | - | chr7.1:77494522-77494541 | MS.gene022098:intron | 45.0% |
!! | GGAAACTTTGGCCATTTTGG+AGG | - | chr7.1:77494705-77494724 | MS.gene022098:intron | 45.0% |
!! | GGCTTCTTTTTGTTTACCGG+GGG | - | chr7.1:77494521-77494540 | MS.gene022098:intron | 45.0% |
!! | GGGCTTCTTTTTGTTTACCG+GGG | - | chr7.1:77494520-77494539 | MS.gene022098:intron | 45.0% |
!! | GGGGCTTCTTTTTGTTTACC+GGG | - | chr7.1:77494519-77494538 | MS.gene022098:intron | 45.0% |
!! | TTCTTTTTGTTTACCGGGGG+GGG | - | chr7.1:77494524-77494543 | MS.gene022098:intron | 45.0% |
!!! | TGTGGCTGTTTTTGAGTGTG+TGG | + | chr7.1:77494266-77494285 | None:intergenic | 45.0% |
!!! | TGTTAGGAGCACTTTTGGGA+AGG | - | chr7.1:77496098-77496117 | MS.gene022098:intron | 45.0% |
!!! | TTATTAAAAAAAATTGTTTT+TGG | + | chr7.1:77494611-77494630 | None:intergenic | 5.0% |
!!! | TTTTTGATAAAAATATTAAA+AGG | - | chr7.1:77495528-77495547 | MS.gene022098:intron | 5.0% |
ACCAGAGTGAAGTCGAAGCA+CGG | - | chr7.1:77494164-77494183 | MS.gene022098:CDS | 50.0% | |
ACTGCTTCCAACAGACTTGC+TGG | + | chr7.1:77496184-77496203 | None:intergenic | 50.0% | |
GAGCATCCACAAGTATGTGC+TGG | - | chr7.1:77495559-77495578 | MS.gene022098:intron | 50.0% | |
GAGTCCAGACAACTGGTAAG+TGG | - | chr7.1:77494961-77494980 | MS.gene022098:intron | 50.0% | |
GCTTCGACTTCACTCTGGTT+CGG | + | chr7.1:77494163-77494182 | None:intergenic | 50.0% | |
TGGAATCCGAAGGATTGCCT+CGG | + | chr7.1:77494328-77494347 | None:intergenic | 50.0% | |
!! | GTGTTGGTAGCAAGGTAGTC+AGG | + | chr7.1:77494242-77494261 | None:intergenic | 50.0% |
!! | TCTTTTTGTTTACCGGGGGG+GGG | - | chr7.1:77494525-77494544 | MS.gene022098:intron | 50.0% |
!! | TGTGTGGAGTGTTGGTAGCA+AGG | + | chr7.1:77494250-77494269 | None:intergenic | 50.0% |
ACCGTGCTTCGACTTCACTC+TGG | + | chr7.1:77494168-77494187 | None:intergenic | 55.0% | |
ATCCGAAGGATTGCCTCGGT+AGG | + | chr7.1:77494324-77494343 | None:intergenic | 55.0% | |
ATCGTGCGATCCTTCGTGCT+GGG | - | chr7.1:77494209-77494228 | MS.gene022098:CDS | 55.0% | |
CACCTACCGAGGCAATCCTT+CGG | - | chr7.1:77494319-77494338 | MS.gene022098:CDS | 55.0% | |
GTGAAGTCGAAGCACGGTTG+AGG | - | chr7.1:77494170-77494189 | MS.gene022098:CDS | 55.0% | |
TGTAGGGGATCCAGCAAGTG+AGG | - | chr7.1:77496032-77496051 | MS.gene022098:intron | 55.0% | |
!! | CTTTTTGTTTACCGGGGGGG+GGG | - | chr7.1:77494526-77494545 | MS.gene022098:intron | 55.0% |
!! | TTTTTGTTTACCGGGGGGGG+GGG | - | chr7.1:77494527-77494546 | MS.gene022098:intron | 55.0% |
AGGAACGAGTCCCAGCACGA+AGG | + | chr7.1:77494222-77494241 | None:intergenic | 60.0% | |
GATCGTGCGATCCTTCGTGC+TGG | - | chr7.1:77494208-77494227 | MS.gene022098:CDS | 60.0% | |
!! | GAAGCACGGTTGAGGTGCTG+TGG | - | chr7.1:77494178-77494197 | MS.gene022098:CDS | 60.0% |
!! | TTTTGTTTACCGGGGGGGGG+GGG | - | chr7.1:77494528-77494547 | MS.gene022098:intron | 60.0% |
TTTGTTTACCGGGGGGGGGG+GGG | - | chr7.1:77494529-77494548 | MS.gene022098:intron | 65.0% | |
TTGTTTACCGGGGGGGGGGG+GGG | - | chr7.1:77494530-77494549 | MS.gene022098:intron | 70.0% | |
TGTTTACCGGGGGGGGGGGG+GGG | - | chr7.1:77494531-77494550 | MS.gene022098:intron | 75.0% | |
! | GTTTACCGGGGGGGGGGGGG+GGG | - | chr7.1:77494532-77494551 | MS.gene022098:intron | 80.0% |
! | TTTACCGGGGGGGGGGGGGG+GGG | - | chr7.1:77494533-77494552 | MS.gene022098:intron | 80.0% |
! | TTACCGGGGGGGGGGGGGGG+GGG | - | chr7.1:77494534-77494553 | MS.gene022098:intron | 85.0% |
! | TACCGGGGGGGGGGGGGGGG+GGG | - | chr7.1:77494535-77494554 | MS.gene022098:intron | 90.0% |
! | ACCCCCCCCCCCCCCCCCCC+CGG | + | chr7.1:77494540-77494559 | None:intergenic | 95.0% |
! | ACCGGGGGGGGGGGGGGGGG+GGG | - | chr7.1:77494536-77494555 | MS.gene022098:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 77494130 | 77496248 | 77494130 | ID=MS.gene022098 |
chr7.1 | mRNA | 77494130 | 77496248 | 77494130 | ID=MS.gene022098.t1;Parent=MS.gene022098 |
chr7.1 | exon | 77496175 | 77496248 | 77496175 | ID=MS.gene022098.t1.exon1;Parent=MS.gene022098.t1 |
chr7.1 | CDS | 77496175 | 77496248 | 77496175 | ID=cds.MS.gene022098.t1;Parent=MS.gene022098.t1 |
chr7.1 | exon | 77495403 | 77495479 | 77495403 | ID=MS.gene022098.t1.exon2;Parent=MS.gene022098.t1 |
chr7.1 | CDS | 77495403 | 77495479 | 77495403 | ID=cds.MS.gene022098.t1;Parent=MS.gene022098.t1 |
chr7.1 | exon | 77494130 | 77494341 | 77494130 | ID=MS.gene022098.t1.exon3;Parent=MS.gene022098.t1 |
chr7.1 | CDS | 77494130 | 77494341 | 77494130 | ID=cds.MS.gene022098.t1;Parent=MS.gene022098.t1 |
Gene Sequence |
Protein sequence |