Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064020.t1 | KEH27246.1 | 94.6 | 373 | 20 | 0 | 1 | 373 | 10 | 382 | 3.60E-204 | 720.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064020.t1 | C0LGR6 | 56.0 | 364 | 159 | 1 | 9 | 371 | 8 | 371 | 3.6e-120 | 433.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064020.t1 | A0A072UCQ8 | 94.6 | 373 | 20 | 0 | 1 | 373 | 10 | 382 | 2.6e-204 | 720.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene064020 | 0.801332 | 9.46E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene064020 | -0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene064020 | -0.808294 | 3.32E-50 | -1.69E-46 |
| MS.gene049603 | MS.gene064020 | 0.80173 | 7.85E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene064020 | 0.819232 | 1.29E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene064020 | 0.809332 | 1.99E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene064020 | -0.805708 | 1.17E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene064020 | 0.835076 | 2.07E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene064020 | -0.821961 | 3.06E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene064020 | 0.804062 | 2.59E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene064020 | -0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene064020 | -0.818178 | 2.25E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene064020 | -0.840298 | 9.46E-58 | -1.69E-46 |
| MS.gene05079 | MS.gene064020 | 0.865172 | 7.16E-65 | -1.69E-46 |
| MS.gene050809 | MS.gene064020 | 0.816667 | 4.92E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene064020 | -0.808199 | 3.48E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene064020 | -0.806654 | 7.41E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene064020 | 0.800465 | 1.42E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene064020 | 0.855126 | 7.77E-62 | -1.69E-46 |
| MS.gene05114 | MS.gene064020 | 0.81845 | 1.95E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene064020 | -0.807482 | 4.95E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene064020 | -0.82489 | 6.32E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene064020 | -0.803654 | 3.14E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene064020 | 0.824823 | 6.55E-54 | -1.69E-46 |
| MS.gene052805 | MS.gene064020 | 0.81637 | 5.73E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene064020 | -0.810123 | 1.35E-50 | -1.69E-46 |
| MS.gene053284 | MS.gene064020 | -0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene064020 | 0.836019 | 1.20E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene064020 | 0.870537 | 1.35E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene064020 | -0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene064020 | 0.815485 | 9.03E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene064020 | -0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene054959 | MS.gene064020 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene064020 | 0.809611 | 1.74E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene064020 | -0.810291 | 1.24E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene064020 | -0.807729 | 4.38E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene064020 | -0.824965 | 6.06E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene064020 | 0.847871 | 8.79E-60 | -1.69E-46 |
| MS.gene056224 | MS.gene064020 | 0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene064020 | 0.822642 | 2.12E-53 | -1.69E-46 |
| MS.gene056857 | MS.gene064020 | 0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene064020 | 0.810862 | 9.34E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene064020 | 0.805565 | 1.26E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene064020 | 0.808866 | 2.51E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene064020 | -0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene064020 | -0.828651 | 7.99E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene064020 | -0.824197 | 9.20E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene064020 | -0.816857 | 4.46E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene064020 | -0.804086 | 2.56E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064020.t1 | MTR_6g090605 | 94.638 | 373 | 20 | 0 | 1 | 373 | 10 | 382 | 0.0 | 703 |
| MS.gene064020.t1 | MTR_6g090615 | 87.903 | 372 | 45 | 0 | 1 | 372 | 1 | 372 | 0.0 | 677 |
| MS.gene064020.t1 | MTR_8g015150 | 44.687 | 367 | 188 | 8 | 9 | 371 | 8 | 363 | 1.39e-91 | 288 |
| MS.gene064020.t1 | MTR_8g014930 | 44.382 | 356 | 184 | 6 | 19 | 371 | 24 | 368 | 2.48e-91 | 288 |
| MS.gene064020.t1 | MTR_8g015150 | 44.687 | 367 | 188 | 8 | 9 | 371 | 8 | 363 | 4.11e-91 | 288 |
| MS.gene064020.t1 | MTR_8g014930 | 44.382 | 356 | 184 | 6 | 19 | 371 | 24 | 368 | 4.44e-91 | 288 |
| MS.gene064020.t1 | MTR_2g100450 | 44.892 | 372 | 187 | 9 | 8 | 371 | 5 | 366 | 1.14e-89 | 286 |
| MS.gene064020.t1 | MTR_8g015150 | 44.687 | 367 | 188 | 8 | 9 | 371 | 8 | 363 | 1.62e-89 | 288 |
| MS.gene064020.t1 | MTR_8g014930 | 44.382 | 356 | 184 | 6 | 19 | 371 | 24 | 368 | 2.45e-89 | 287 |
| MS.gene064020.t1 | MTR_8g014930 | 44.382 | 356 | 184 | 6 | 19 | 371 | 19 | 363 | 3.45e-89 | 287 |
| MS.gene064020.t1 | MTR_2g100450 | 44.892 | 372 | 187 | 9 | 8 | 371 | 5 | 366 | 1.03e-88 | 286 |
| MS.gene064020.t1 | MTR_8g014700 | 42.162 | 370 | 203 | 7 | 5 | 371 | 10 | 371 | 5.49e-85 | 271 |
| MS.gene064020.t1 | MTR_8g014790 | 42.400 | 375 | 205 | 6 | 1 | 371 | 1 | 368 | 8.93e-85 | 275 |
| MS.gene064020.t1 | MTR_8g014690 | 42.133 | 375 | 202 | 7 | 5 | 371 | 6 | 373 | 1.64e-83 | 269 |
| MS.gene064020.t1 | MTR_8g014760 | 41.823 | 373 | 205 | 6 | 1 | 371 | 6 | 368 | 2.26e-83 | 264 |
| MS.gene064020.t1 | MTR_8g014700 | 42.162 | 370 | 203 | 7 | 5 | 371 | 10 | 371 | 2.72e-83 | 271 |
| MS.gene064020.t1 | MTR_8g014700 | 42.204 | 372 | 200 | 8 | 5 | 371 | 10 | 371 | 3.86e-83 | 271 |
| MS.gene064020.t1 | MTR_8g014760 | 41.823 | 373 | 205 | 6 | 1 | 371 | 6 | 368 | 1.50e-82 | 264 |
| MS.gene064020.t1 | MTR_8g015340 | 43.266 | 349 | 186 | 7 | 27 | 371 | 42 | 382 | 2.45e-82 | 270 |
| MS.gene064020.t1 | MTR_8g015200 | 43.768 | 345 | 183 | 5 | 29 | 371 | 10 | 345 | 3.33e-82 | 268 |
| MS.gene064020.t1 | MTR_8g014760 | 41.823 | 373 | 205 | 6 | 1 | 371 | 6 | 368 | 5.57e-82 | 264 |
| MS.gene064020.t1 | MTR_8g015190 | 43.539 | 356 | 185 | 8 | 24 | 371 | 46 | 393 | 7.22e-82 | 268 |
| MS.gene064020.t1 | MTR_8g014690 | 41.962 | 367 | 201 | 6 | 10 | 371 | 7 | 366 | 3.93e-81 | 266 |
| MS.gene064020.t1 | MTR_8g014760 | 41.823 | 373 | 205 | 6 | 1 | 371 | 2 | 364 | 1.59e-80 | 264 |
| MS.gene064020.t1 | MTR_8g015190 | 43.539 | 356 | 185 | 8 | 24 | 371 | 36 | 383 | 1.77e-80 | 268 |
| MS.gene064020.t1 | MTR_8g015190 | 35.776 | 232 | 114 | 3 | 4 | 209 | 983 | 1205 | 2.96e-34 | 135 |
| MS.gene064020.t1 | MTR_2g100470 | 42.330 | 352 | 185 | 7 | 27 | 371 | 13 | 353 | 3.56e-77 | 253 |
| MS.gene064020.t1 | MTR_8g014730 | 39.418 | 378 | 206 | 8 | 1 | 371 | 6 | 367 | 5.04e-77 | 250 |
| MS.gene064020.t1 | MTR_8g461120 | 40.533 | 375 | 204 | 12 | 7 | 371 | 20 | 385 | 1.95e-75 | 247 |
| MS.gene064020.t1 | MTR_8g461120 | 40.533 | 375 | 204 | 12 | 7 | 371 | 20 | 385 | 2.44e-74 | 247 |
| MS.gene064020.t1 | MTR_8g461120 | 40.533 | 375 | 204 | 12 | 7 | 371 | 20 | 385 | 3.07e-74 | 247 |
| MS.gene064020.t1 | MTR_8g014840 | 39.722 | 360 | 184 | 6 | 5 | 357 | 1 | 334 | 1.42e-73 | 232 |
| MS.gene064020.t1 | MTR_8g028110 | 38.889 | 378 | 216 | 8 | 1 | 371 | 6 | 375 | 1.39e-72 | 243 |
| MS.gene064020.t1 | MTR_8g015010 | 36.761 | 389 | 203 | 15 | 28 | 385 | 50 | 426 | 1.19e-55 | 196 |
| MS.gene064020.t1 | MTR_8g015040 | 34.772 | 394 | 213 | 12 | 25 | 385 | 55 | 437 | 1.12e-52 | 188 |
| MS.gene064020.t1 | MTR_5g058090 | 35.754 | 358 | 207 | 10 | 27 | 371 | 37 | 384 | 3.94e-47 | 172 |
| MS.gene064020.t1 | MTR_6g071455 | 33.923 | 339 | 198 | 13 | 27 | 359 | 24 | 342 | 9.44e-43 | 156 |
| MS.gene064020.t1 | MTR_6g071455 | 33.923 | 339 | 198 | 13 | 27 | 359 | 24 | 342 | 6.13e-42 | 155 |
| MS.gene064020.t1 | MTR_8g014980 | 43.915 | 189 | 91 | 5 | 28 | 207 | 14 | 196 | 3.01e-36 | 131 |
| MS.gene064020.t1 | MTR_1g066950 | 31.856 | 361 | 195 | 12 | 25 | 356 | 23 | 361 | 8.53e-34 | 133 |
| MS.gene064020.t1 | MTR_8g015100 | 44.444 | 171 | 83 | 4 | 24 | 189 | 51 | 214 | 1.70e-33 | 132 |
| MS.gene064020.t1 | MTR_3g086120 | 29.722 | 360 | 205 | 11 | 25 | 356 | 21 | 360 | 2.57e-33 | 132 |
| MS.gene064020.t1 | MTR_3g086120 | 29.722 | 360 | 205 | 11 | 25 | 356 | 21 | 360 | 2.77e-33 | 132 |
| MS.gene064020.t1 | MTR_7g100630 | 32.410 | 361 | 193 | 14 | 24 | 356 | 28 | 365 | 4.39e-33 | 131 |
| MS.gene064020.t1 | MTR_2g100450 | 41.772 | 158 | 87 | 2 | 217 | 371 | 6 | 161 | 1.14e-29 | 121 |
| MS.gene064020.t1 | MTR_7g057170 | 31.579 | 323 | 175 | 15 | 7 | 313 | 10 | 302 | 1.35e-22 | 100 |
| MS.gene064020.t1 | MTR_7g057170 | 31.579 | 323 | 175 | 15 | 7 | 313 | 10 | 302 | 1.47e-22 | 100 |
| MS.gene064020.t1 | MTR_4g086250 | 25.806 | 372 | 238 | 15 | 9 | 364 | 16 | 365 | 5.33e-22 | 97.8 |
| MS.gene064020.t1 | MTR_1g104850 | 27.763 | 371 | 225 | 18 | 28 | 383 | 25 | 367 | 1.79e-21 | 96.3 |
| MS.gene064020.t1 | MTR_8g015150 | 41.525 | 118 | 68 | 1 | 255 | 371 | 1 | 118 | 9.53e-20 | 91.7 |
| MS.gene064020.t1 | MTR_8g014970 | 31.788 | 151 | 93 | 5 | 242 | 385 | 4 | 151 | 2.40e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064020.t1 | AT4G29180 | 56.044 | 364 | 159 | 1 | 9 | 371 | 8 | 371 | 1.02e-144 | 433 |
| MS.gene064020.t1 | AT4G29180 | 56.044 | 364 | 159 | 1 | 9 | 371 | 8 | 371 | 1.07e-144 | 433 |
| MS.gene064020.t1 | AT4G29180 | 56.044 | 364 | 159 | 1 | 9 | 371 | 8 | 371 | 1.34e-144 | 433 |
| MS.gene064020.t1 | AT4G29450 | 58.543 | 357 | 145 | 3 | 18 | 371 | 16 | 372 | 4.05e-138 | 415 |
| MS.gene064020.t1 | AT4G29990 | 43.089 | 369 | 198 | 6 | 9 | 371 | 4 | 366 | 1.87e-93 | 295 |
| MS.gene064020.t1 | AT4G29990 | 43.089 | 369 | 198 | 6 | 9 | 371 | 4 | 366 | 1.82e-92 | 296 |
| MS.gene064020.t1 | AT2G19210 | 41.823 | 373 | 207 | 6 | 3 | 371 | 5 | 371 | 3.83e-90 | 290 |
| MS.gene064020.t1 | AT1G05700 | 43.583 | 374 | 179 | 9 | 12 | 372 | 14 | 368 | 3.26e-86 | 279 |
| MS.gene064020.t1 | AT1G05700 | 43.583 | 374 | 179 | 9 | 12 | 372 | 14 | 368 | 4.92e-86 | 279 |
| MS.gene064020.t1 | AT2G19230 | 41.551 | 361 | 199 | 7 | 17 | 371 | 18 | 372 | 9.05e-84 | 273 |
| MS.gene064020.t1 | AT2G19230 | 41.551 | 361 | 199 | 7 | 17 | 371 | 18 | 372 | 7.03e-83 | 273 |
| MS.gene064020.t1 | AT2G19190 | 39.842 | 379 | 210 | 9 | 1 | 371 | 3 | 371 | 1.27e-77 | 256 |
| MS.gene064020.t1 | AT1G51880 | 38.933 | 375 | 216 | 7 | 1 | 371 | 1 | 366 | 2.14e-76 | 253 |
| MS.gene064020.t1 | AT1G51880 | 38.933 | 375 | 216 | 7 | 1 | 371 | 19 | 384 | 2.46e-76 | 253 |
| MS.gene064020.t1 | AT1G51880 | 38.933 | 375 | 216 | 7 | 1 | 371 | 19 | 384 | 2.62e-76 | 253 |
| MS.gene064020.t1 | AT1G51790 | 40.369 | 379 | 208 | 9 | 1 | 371 | 1 | 369 | 9.23e-76 | 251 |
| MS.gene064020.t1 | AT1G51790 | 40.369 | 379 | 208 | 9 | 1 | 371 | 1 | 369 | 9.23e-76 | 251 |
| MS.gene064020.t1 | AT1G51790 | 40.369 | 379 | 208 | 9 | 1 | 371 | 1 | 369 | 1.04e-75 | 252 |
| MS.gene064020.t1 | AT1G51800 | 37.895 | 380 | 220 | 8 | 1 | 374 | 1 | 370 | 2.92e-74 | 248 |
| MS.gene064020.t1 | AT1G51910 | 38.814 | 371 | 213 | 7 | 6 | 371 | 6 | 367 | 1.02e-72 | 243 |
| MS.gene064020.t1 | AT1G51890 | 37.398 | 369 | 218 | 7 | 7 | 371 | 3 | 362 | 1.22e-70 | 235 |
| MS.gene064020.t1 | AT5G59680 | 38.268 | 358 | 200 | 7 | 22 | 371 | 22 | 366 | 1.40e-70 | 238 |
| MS.gene064020.t1 | AT1G51890 | 37.398 | 369 | 218 | 7 | 7 | 371 | 3 | 362 | 1.08e-69 | 235 |
| MS.gene064020.t1 | AT1G51890 | 37.398 | 369 | 218 | 7 | 7 | 371 | 3 | 362 | 1.27e-69 | 235 |
| MS.gene064020.t1 | AT3G46400 | 37.027 | 370 | 216 | 8 | 9 | 371 | 8 | 367 | 3.97e-69 | 233 |
| MS.gene064020.t1 | AT1G49100 | 36.898 | 374 | 217 | 8 | 6 | 371 | 7 | 369 | 4.79e-69 | 233 |
| MS.gene064020.t1 | AT1G51860 | 38.649 | 370 | 213 | 8 | 7 | 371 | 7 | 367 | 8.05e-69 | 233 |
| MS.gene064020.t1 | AT3G46340 | 36.504 | 389 | 232 | 9 | 3 | 385 | 5 | 384 | 1.43e-68 | 232 |
| MS.gene064020.t1 | AT2G14440 | 37.978 | 366 | 204 | 10 | 7 | 362 | 7 | 359 | 4.93e-68 | 230 |
| MS.gene064020.t1 | AT3G21340 | 37.466 | 371 | 211 | 10 | 9 | 371 | 13 | 370 | 1.66e-67 | 226 |
| MS.gene064020.t1 | AT3G21340 | 37.466 | 371 | 211 | 10 | 9 | 371 | 13 | 370 | 2.35e-66 | 226 |
| MS.gene064020.t1 | AT2G14510 | 36.565 | 361 | 215 | 7 | 7 | 362 | 7 | 358 | 2.91e-66 | 226 |
| MS.gene064020.t1 | AT5G59650 | 38.251 | 366 | 203 | 8 | 15 | 371 | 15 | 366 | 3.10e-66 | 226 |
| MS.gene064020.t1 | AT3G46330 | 36.436 | 376 | 217 | 10 | 4 | 369 | 3 | 366 | 3.43e-66 | 225 |
| MS.gene064020.t1 | AT3G46330 | 36.436 | 376 | 217 | 10 | 4 | 369 | 3 | 366 | 4.07e-66 | 225 |
| MS.gene064020.t1 | AT2G14510 | 36.565 | 361 | 215 | 7 | 7 | 362 | 15 | 366 | 4.89e-66 | 225 |
| MS.gene064020.t1 | AT1G51870 | 37.701 | 374 | 218 | 9 | 4 | 371 | 3 | 367 | 1.10e-65 | 223 |
| MS.gene064020.t1 | AT2G28990 | 36.885 | 366 | 219 | 6 | 9 | 371 | 5 | 361 | 1.29e-65 | 224 |
| MS.gene064020.t1 | AT2G28990 | 36.885 | 366 | 219 | 6 | 9 | 371 | 5 | 361 | 1.29e-65 | 224 |
| MS.gene064020.t1 | AT1G51870 | 37.701 | 374 | 218 | 9 | 4 | 371 | 3 | 367 | 2.09e-65 | 223 |
| MS.gene064020.t1 | AT5G59650 | 38.375 | 357 | 197 | 8 | 15 | 362 | 15 | 357 | 3.55e-65 | 223 |
| MS.gene064020.t1 | AT5G59670 | 37.430 | 358 | 208 | 8 | 20 | 371 | 19 | 366 | 7.19e-65 | 222 |
| MS.gene064020.t1 | AT5G59670 | 37.430 | 358 | 208 | 8 | 20 | 371 | 19 | 366 | 7.19e-65 | 222 |
| MS.gene064020.t1 | AT1G51850 | 36.339 | 366 | 217 | 8 | 9 | 371 | 6 | 358 | 2.10e-64 | 221 |
| MS.gene064020.t1 | AT1G07550 | 36.338 | 355 | 215 | 5 | 20 | 371 | 20 | 366 | 3.02e-64 | 220 |
| MS.gene064020.t1 | AT1G51820 | 37.534 | 365 | 207 | 8 | 10 | 371 | 12 | 358 | 6.96e-64 | 219 |
| MS.gene064020.t1 | AT3G46420 | 38.378 | 370 | 210 | 8 | 9 | 372 | 7 | 364 | 2.09e-62 | 214 |
| MS.gene064020.t1 | AT1G07560 | 35.912 | 362 | 216 | 7 | 16 | 371 | 17 | 368 | 4.44e-62 | 214 |
| MS.gene064020.t1 | AT2G04300 | 35.561 | 374 | 226 | 8 | 4 | 371 | 7 | 371 | 8.78e-62 | 213 |
| MS.gene064020.t1 | AT1G51805 | 37.396 | 361 | 201 | 11 | 20 | 372 | 17 | 360 | 1.67e-61 | 213 |
| MS.gene064020.t1 | AT2G29000 | 35.809 | 377 | 221 | 10 | 1 | 371 | 1 | 362 | 4.74e-61 | 211 |
| MS.gene064020.t1 | AT4G20450 | 35.052 | 388 | 221 | 13 | 7 | 371 | 7 | 386 | 1.16e-60 | 210 |
| MS.gene064020.t1 | AT4G20450 | 35.052 | 388 | 221 | 13 | 7 | 371 | 7 | 386 | 1.26e-60 | 210 |
| MS.gene064020.t1 | AT1G51850 | 35.246 | 366 | 201 | 8 | 9 | 371 | 6 | 338 | 8.83e-60 | 207 |
| MS.gene064020.t1 | AT2G28960 | 37.151 | 358 | 204 | 10 | 10 | 359 | 8 | 352 | 7.99e-55 | 194 |
| MS.gene064020.t1 | AT1G51805 | 34.637 | 358 | 191 | 9 | 20 | 372 | 17 | 336 | 4.81e-54 | 192 |
| MS.gene064020.t1 | AT3G46350 | 37.812 | 320 | 172 | 10 | 11 | 319 | 12 | 315 | 6.18e-54 | 184 |
| MS.gene064020.t1 | AT2G04300 | 36.418 | 335 | 196 | 8 | 4 | 334 | 7 | 328 | 1.27e-53 | 190 |
| MS.gene064020.t1 | AT3G46370 | 38.255 | 298 | 173 | 8 | 93 | 385 | 2 | 293 | 7.56e-52 | 185 |
| MS.gene064020.t1 | AT3G46370 | 38.255 | 298 | 173 | 8 | 93 | 385 | 2 | 293 | 7.56e-52 | 185 |
| MS.gene064020.t1 | AT5G16900 | 34.392 | 378 | 216 | 13 | 11 | 371 | 8 | 370 | 1.62e-48 | 174 |
| MS.gene064020.t1 | AT5G16900 | 34.392 | 378 | 216 | 13 | 11 | 371 | 8 | 370 | 9.39e-48 | 174 |
| MS.gene064020.t1 | AT5G16900 | 34.392 | 378 | 216 | 13 | 11 | 371 | 8 | 370 | 9.39e-48 | 174 |
| MS.gene064020.t1 | AT1G51840 | 42.286 | 175 | 91 | 4 | 20 | 193 | 24 | 189 | 1.48e-36 | 132 |
| MS.gene064020.t1 | AT1G51840 | 42.286 | 175 | 91 | 4 | 20 | 193 | 24 | 189 | 1.48e-36 | 132 |
| MS.gene064020.t1 | AT1G51840 | 42.286 | 175 | 91 | 4 | 20 | 193 | 24 | 189 | 1.48e-36 | 132 |
| MS.gene064020.t1 | AT1G51840 | 42.286 | 175 | 91 | 4 | 20 | 193 | 24 | 189 | 1.48e-36 | 132 |
| MS.gene064020.t1 | AT1G51840 | 42.286 | 175 | 91 | 4 | 20 | 193 | 24 | 189 | 1.48e-36 | 132 |
| MS.gene064020.t1 | AT1G51810 | 36.564 | 227 | 132 | 6 | 151 | 371 | 13 | 233 | 2.18e-34 | 135 |
| MS.gene064020.t1 | AT1G67720 | 30.769 | 364 | 195 | 12 | 25 | 356 | 22 | 360 | 8.54e-34 | 133 |
| MS.gene064020.t1 | AT1G51860 | 36.889 | 225 | 134 | 5 | 151 | 371 | 3 | 223 | 4.06e-33 | 131 |
| MS.gene064020.t1 | AT1G24485 | 29.050 | 358 | 226 | 12 | 8 | 359 | 11 | 346 | 6.51e-33 | 128 |
| MS.gene064020.t1 | AT5G59660 | 29.630 | 378 | 172 | 12 | 1 | 371 | 16 | 306 | 8.13e-33 | 130 |
| MS.gene064020.t1 | AT5G59660 | 29.630 | 378 | 172 | 12 | 1 | 371 | 16 | 306 | 1.09e-32 | 130 |
| MS.gene064020.t1 | AT1G24485 | 28.852 | 357 | 228 | 10 | 8 | 359 | 11 | 346 | 1.49e-32 | 127 |
| MS.gene064020.t1 | AT3G46270 | 31.880 | 367 | 216 | 16 | 8 | 359 | 15 | 362 | 1.58e-32 | 127 |
| MS.gene064020.t1 | AT3G46270 | 31.880 | 367 | 216 | 16 | 8 | 359 | 7 | 354 | 1.65e-32 | 127 |
| MS.gene064020.t1 | AT1G24485 | 29.050 | 358 | 226 | 12 | 8 | 359 | 11 | 346 | 2.39e-32 | 127 |
| MS.gene064020.t1 | AT2G28970 | 35.426 | 223 | 138 | 3 | 151 | 371 | 11 | 229 | 2.74e-32 | 129 |
| MS.gene064020.t1 | AT5G59660 | 33.562 | 292 | 140 | 9 | 85 | 371 | 42 | 284 | 6.19e-32 | 128 |
| MS.gene064020.t1 | AT1G24485 | 29.050 | 358 | 226 | 12 | 8 | 359 | 11 | 346 | 7.79e-32 | 127 |
| MS.gene064020.t1 | AT3G46260 | 30.084 | 359 | 214 | 14 | 19 | 359 | 15 | 354 | 1.23e-31 | 124 |
| MS.gene064020.t1 | AT2G37050 | 32.329 | 365 | 192 | 18 | 23 | 356 | 22 | 362 | 7.70e-31 | 125 |
| MS.gene064020.t1 | AT2G37050 | 32.329 | 365 | 192 | 18 | 23 | 356 | 22 | 362 | 7.92e-31 | 125 |
| MS.gene064020.t1 | AT2G37050 | 32.055 | 365 | 193 | 17 | 23 | 356 | 22 | 362 | 8.83e-31 | 124 |
| MS.gene064020.t1 | AT2G37050 | 32.055 | 365 | 193 | 17 | 23 | 356 | 22 | 362 | 9.07e-31 | 124 |
| MS.gene064020.t1 | AT3G46280 | 29.620 | 368 | 219 | 16 | 8 | 359 | 5 | 348 | 8.07e-30 | 120 |
| MS.gene064020.t1 | AT1G51890 | 34.742 | 213 | 132 | 4 | 162 | 371 | 90 | 298 | 1.59e-28 | 118 |
| MS.gene064020.t1 | AT1G51890 | 41.758 | 91 | 48 | 2 | 7 | 96 | 3 | 89 | 4.12e-13 | 71.2 |
| MS.gene064020.t1 | AT3G46240 | 29.769 | 346 | 193 | 13 | 20 | 361 | 1 | 300 | 3.56e-27 | 112 |
| MS.gene064020.t1 | AT3G19230 | 29.042 | 334 | 198 | 12 | 48 | 362 | 37 | 350 | 5.74e-26 | 109 |
| MS.gene064020.t1 | AT1G51830 | 36.364 | 165 | 102 | 2 | 209 | 371 | 13 | 176 | 4.40e-25 | 107 |
| MS.gene064020.t1 | AT1G51830 | 36.364 | 165 | 102 | 2 | 209 | 371 | 6 | 169 | 5.10e-25 | 107 |
| MS.gene064020.t1 | AT2G28960 | 31.718 | 227 | 146 | 5 | 135 | 359 | 1 | 220 | 1.19e-23 | 103 |
| MS.gene064020.t1 | AT2G28970 | 36.250 | 160 | 99 | 2 | 214 | 371 | 106 | 264 | 2.45e-23 | 102 |
| MS.gene064020.t1 | AT5G48740 | 28.779 | 344 | 214 | 16 | 28 | 362 | 20 | 341 | 1.24e-22 | 100 |
| MS.gene064020.t1 | AT3G05990 | 25.501 | 349 | 228 | 13 | 30 | 364 | 28 | 358 | 8.65e-17 | 82.4 |
| MS.gene064020.t1 | AT5G59616 | 35.294 | 102 | 64 | 1 | 272 | 371 | 3 | 104 | 2.59e-13 | 67.4 |
| MS.gene064020.t1 | AT5G16900 | 29.775 | 178 | 106 | 6 | 209 | 371 | 11 | 184 | 5.28e-13 | 70.9 |
| MS.gene064020.t1 | AT1G28340 | 24.768 | 323 | 209 | 12 | 64 | 359 | 50 | 365 | 3.37e-11 | 65.5 |
Find 55 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGTTGGTGTAAATTTC+TGG | 0.160577 | 6.1:-79139273 | MS.gene064020:CDS |
| TATACATTGAATTTCAAATT+TGG | 0.176424 | 6.1:+79138830 | None:intergenic |
| ACGATGTTTACGATAGAATT+TGG | 0.218503 | 6.1:-79139009 | MS.gene064020:CDS |
| TGGGACATTGGTTCATTTAA+TGG | 0.238692 | 6.1:-79139049 | MS.gene064020:CDS |
| AAGGAATGAGAATGATAATT+TGG | 0.258969 | 6.1:-79138876 | MS.gene064020:CDS |
| AACCACCATTTGAAGTTATT+AGG | 0.288140 | 6.1:-79138913 | MS.gene064020:CDS |
| TTAATTCCTGTTTGTATGTA+AGG | 0.293676 | 6.1:+79139493 | None:intergenic |
| TCTATTTATTTAGTTTATCT+TGG | 0.295118 | 6.1:+79138522 | None:intergenic |
| TCTATTTATAAAACTGAGTT+TGG | 0.305953 | 6.1:-79139103 | MS.gene064020:CDS |
| ATAAGAGCTTCTTTCTTGTA+TGG | 0.317064 | 6.1:-79139334 | MS.gene064020:CDS |
| AGTTCCAAAGCTGAGATAAA+AGG | 0.321370 | 6.1:+79139142 | None:intergenic |
| TGAGAGAATTCAACGTATCT+TGG | 0.347148 | 6.1:-79138766 | MS.gene064020:CDS |
| CAATTAATCGGTAACAGTTC+CGG | 0.348124 | 6.1:+79139383 | None:intergenic |
| CTGAGATCTGAGAGTGGATA+TGG | 0.352130 | 6.1:+79139424 | None:intergenic |
| AATGTTTGTCTTGTGAATAA+AGG | 0.373692 | 6.1:-79139175 | MS.gene064020:CDS |
| AAAATCGATGTTAGTGAAGA+TGG | 0.375185 | 6.1:-79138941 | MS.gene064020:CDS |
| CGATTAATTGCCGGAACAAA+AGG | 0.383758 | 6.1:-79139370 | MS.gene064020:CDS |
| AACTGTTACCGATTAATTGC+CGG | 0.390663 | 6.1:-79139379 | MS.gene064020:CDS |
| AAATTATCATTCTCATTCCT+TGG | 0.410948 | 6.1:+79138878 | None:intergenic |
| AGGTGGAAGTGTTGAATCTT+CGG | 0.415841 | 6.1:+79138634 | None:intergenic |
| CCAGTGATGACAAATTCAAT+TGG | 0.427066 | 6.1:-79140537 | None:intergenic |
| GAGAGTGGATATGGTAGATT+AGG | 0.427233 | 6.1:+79139433 | None:intergenic |
| GTGGTTGCTTGCAAGTATCT+TGG | 0.429256 | 6.1:+79138713 | None:intergenic |
| GTTCATGCACAACAACAAAC+AGG | 0.451581 | 6.1:-79140471 | MS.gene064020:intron |
| TGCTTCAGAACAAGTTGCAT+TGG | 0.463718 | 6.1:-79139230 | MS.gene064020:CDS |
| GGTATTATTGATTTAATCAA+AGG | 0.466863 | 6.1:+79138734 | None:intergenic |
| CCAACATAGAGATCAAATTC+AGG | 0.468796 | 6.1:+79139286 | None:intergenic |
| CCTGAATTTGATCTCTATGT+TGG | 0.470869 | 6.1:-79139286 | MS.gene064020:CDS |
| ATTGGTTCATTTAATGGAAG+TGG | 0.474592 | 6.1:-79139043 | MS.gene064020:CDS |
| TGTCTTGTGAATAAAGGAAA+AGG | 0.476060 | 6.1:-79139169 | MS.gene064020:CDS |
| ATACTTGTACTTTGCAGAAG+TGG | 0.478474 | 6.1:-79138810 | MS.gene064020:CDS |
| TTATAAATAGAACTATCAAC+TGG | 0.479692 | 6.1:+79139115 | None:intergenic |
| GCATTCCTAATAACTTCAAA+TGG | 0.487694 | 6.1:+79138908 | None:intergenic |
| GATGGACCTTACATACAAAC+AGG | 0.488055 | 6.1:-79139499 | MS.gene064020:CDS |
| ATACCATCTTCTTCAGATGT+TGG | 0.490806 | 6.1:+79138563 | None:intergenic |
| ATCTCCACTGCATTAAGTAT+AGG | 0.526223 | 6.1:+79138614 | None:intergenic |
| TTCTTGTATGGAAACTATGA+CGG | 0.528880 | 6.1:-79139322 | MS.gene064020:CDS |
| TGTGTTTAATTCGAAGTCGT+TGG | 0.533736 | 6.1:-79138690 | MS.gene064020:CDS |
| TTCCTAATAACTTCAAATGG+TGG | 0.535065 | 6.1:+79138911 | None:intergenic |
| TACCGCTGAATTCCTCGTCA+TGG | 0.547459 | 6.1:-79138985 | MS.gene064020:CDS |
| AAAATAAAATACGTCACAGA+TGG | 0.549242 | 6.1:-79139517 | MS.gene064020:CDS |
| CTTCCAACATCTGAAGAAGA+TGG | 0.554676 | 6.1:-79138566 | MS.gene064020:CDS |
| GAATTCAACGTATCTTGGAA+TGG | 0.578329 | 6.1:-79138761 | MS.gene064020:CDS |
| TCCACTGCATTAAGTATAGG+TGG | 0.589660 | 6.1:+79138617 | None:intergenic |
| TCCACCTATACTTAATGCAG+TGG | 0.595122 | 6.1:-79138618 | MS.gene064020:CDS |
| GGCTTCATAAGCATTGATTG+TGG | 0.601577 | 6.1:-79139577 | MS.gene064020:CDS |
| TTCATAAGCATTGATTGTGG+TGG | 0.603402 | 6.1:-79139574 | MS.gene064020:CDS |
| TGCATTGGAAATAATCAGCA+CGG | 0.612755 | 6.1:-79139215 | MS.gene064020:CDS |
| GCTTATAGATTTCCATGACG+AGG | 0.639249 | 6.1:+79138973 | None:intergenic |
| TTCCATGACGAGGAATTCAG+CGG | 0.651129 | 6.1:+79138983 | None:intergenic |
| AAACTTCTGAGATCTGAGAG+TGG | 0.652061 | 6.1:+79139418 | None:intergenic |
| TAACAGTTCCGGTTTCCACG+AGG | 0.660287 | 6.1:+79139394 | None:intergenic |
| CGTTGGTCGCAAATGAACAT+CGG | 0.680315 | 6.1:-79138673 | MS.gene064020:CDS |
| TTAGGAATGCAGCTACACCA+AGG | 0.727062 | 6.1:-79138895 | MS.gene064020:CDS |
| CGACTTCGAATTAAACACAG+TGG | 0.743612 | 6.1:+79138694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTTAAAACAACTTA+TGG | + | chr6.1:79139180-79139199 | None:intergenic | 10.0% |
| !! | CCATTAACTATAATTAATAA+GGG | + | chr6.1:79138895-79138914 | None:intergenic | 15.0% |
| !! | TATACATTGAATTTCAAATT+TGG | + | chr6.1:79140227-79140246 | None:intergenic | 15.0% |
| !! | TATTGAAATGCAATAAATAA+GGG | - | chr6.1:79138929-79138948 | MS.gene064020:CDS | 15.0% |
| !! | TCCATTAACTATAATTAATA+AGG | + | chr6.1:79138896-79138915 | None:intergenic | 15.0% |
| !! | TTATTGAAATGCAATAAATA+AGG | - | chr6.1:79138928-79138947 | MS.gene064020:CDS | 15.0% |
| !!! | ATATTTTTAAGACAAAATCA+TGG | - | chr6.1:79138685-79138704 | MS.gene064020:CDS | 15.0% |
| !!! | CCATTTTTCAAAATTATTAT+CGG | - | chr6.1:79139336-79139355 | MS.gene064020:CDS | 15.0% |
| !! | CCCTTATTAATTATAGTTAA+TGG | - | chr6.1:79138892-79138911 | MS.gene064020:CDS | 20.0% |
| !! | GTTGTATCTGTATTATAAAA+GGG | - | chr6.1:79138978-79138997 | MS.gene064020:CDS | 20.0% |
| !! | TCTATTTATAAAACTGAGTT+TGG | - | chr6.1:79139951-79139970 | MS.gene064020:intron | 20.0% |
| !! | TTATAAATAGAACTATCAAC+TGG | + | chr6.1:79139942-79139961 | None:intergenic | 20.0% |
| !!! | AATAAATAAGGGTATGTTAA+TGG | - | chr6.1:79138940-79138959 | MS.gene064020:CDS | 20.0% |
| !!! | AATTTGAGACAAAGAAAAAT+AGG | - | chr6.1:79139007-79139026 | MS.gene064020:CDS | 20.0% |
| !!! | ATGATAATTTGGAATTTTCT+TGG | - | chr6.1:79140189-79140208 | MS.gene064020:intron | 20.0% |
| !!! | ATTGTTACTTTTCAAAAGAT+GGG | - | chr6.1:79139986-79140005 | MS.gene064020:intron | 20.0% |
| !!! | CCGATAATAATTTTGAAAAA+TGG | + | chr6.1:79139339-79139358 | None:intergenic | 20.0% |
| !!! | CTATTTTTTAAATTACGATG+AGG | + | chr6.1:79138784-79138803 | None:intergenic | 20.0% |
| !!! | CTTTAAATTGAAAGTGTTTA+CGG | - | chr6.1:79139239-79139258 | MS.gene064020:CDS | 20.0% |
| !!! | GGTATTATTGATTTAATCAA+AGG | + | chr6.1:79140323-79140342 | None:intergenic | 20.0% |
| !!! | TGAAAAATGGAAAAGTTTTA+AGG | + | chr6.1:79139326-79139345 | None:intergenic | 20.0% |
| !!! | TTTTCAAAATTATTATCGGT+CGG | - | chr6.1:79139340-79139359 | MS.gene064020:CDS | 20.0% |
| ! | AAAATAAAATACGTCACAGA+TGG | - | chr6.1:79139537-79139556 | MS.gene064020:CDS | 25.0% |
| ! | AAATTATCATTCTCATTCCT+TGG | + | chr6.1:79140179-79140198 | None:intergenic | 25.0% |
| ! | AACATCTATTATAAGATGGA+GGG | - | chr6.1:79139036-79139055 | MS.gene064020:CDS | 25.0% |
| ! | AAGGAATGAGAATGATAATT+TGG | - | chr6.1:79140178-79140197 | MS.gene064020:intron | 25.0% |
| ! | AATGTTTGTCTTGTGAATAA+AGG | - | chr6.1:79139879-79139898 | MS.gene064020:intron | 25.0% |
| ! | AGAGAACATCTATTATAAGA+TGG | - | chr6.1:79139032-79139051 | MS.gene064020:CDS | 25.0% |
| ! | ATCAATCTCATAAATTTCTC+TGG | - | chr6.1:79139143-79139162 | MS.gene064020:CDS | 25.0% |
| ! | CAAGATTCCATGATATTAAA+CGG | + | chr6.1:79138816-79138835 | None:intergenic | 25.0% |
| ! | CGTTGTATCTGTATTATAAA+AGG | - | chr6.1:79138977-79138996 | MS.gene064020:CDS | 25.0% |
| ! | TCAATCTCATAAATTTCTCT+GGG | - | chr6.1:79139144-79139163 | MS.gene064020:CDS | 25.0% |
| ! | TTAATTCCTGTTTGTATGTA+AGG | + | chr6.1:79139564-79139583 | None:intergenic | 25.0% |
| !! | ACACTTTCAATTTAAAGTGT+CGG | + | chr6.1:79139236-79139255 | None:intergenic | 25.0% |
| !! | TTCTTATCTCAGTTTTACTT+AGG | - | chr6.1:79139090-79139109 | MS.gene064020:CDS | 25.0% |
| !! | TTTACTTAGGATACTCTTTT+GGG | - | chr6.1:79139103-79139122 | MS.gene064020:CDS | 25.0% |
| !! | TTTTACTTAGGATACTCTTT+TGG | - | chr6.1:79139102-79139121 | MS.gene064020:CDS | 25.0% |
| !!! | ATCTAATTTGCTTTCTATTC+AGG | - | chr6.1:79139456-79139475 | MS.gene064020:CDS | 25.0% |
| !!! | ATGGTAGATTAGGATTTTTT+GGG | + | chr6.1:79139614-79139633 | None:intergenic | 25.0% |
| !!! | CATTGTTACTTTTCAAAAGA+TGG | - | chr6.1:79139985-79140004 | MS.gene064020:intron | 25.0% |
| !!! | GGAGTAATTTTTTAGTATCA+TGG | - | chr6.1:79139057-79139076 | MS.gene064020:CDS | 25.0% |
| !!! | TATGGTAGATTAGGATTTTT+TGG | + | chr6.1:79139615-79139634 | None:intergenic | 25.0% |
| AAAATCGATGTTAGTGAAGA+TGG | - | chr6.1:79140113-79140132 | MS.gene064020:intron | 30.0% | |
| ACGATGTTTACGATAGAATT+TGG | - | chr6.1:79140045-79140064 | MS.gene064020:intron | 30.0% | |
| ATAAGAGCTTCTTTCTTGTA+TGG | - | chr6.1:79139720-79139739 | MS.gene064020:intron | 30.0% | |
| ATATGCACCGTTTAATATCA+TGG | - | chr6.1:79138806-79138825 | MS.gene064020:CDS | 30.0% | |
| GAACATCTATTATAAGATGG+AGG | - | chr6.1:79139035-79139054 | MS.gene064020:CDS | 30.0% | |
| GCATTCCTAATAACTTCAAA+TGG | + | chr6.1:79140149-79140168 | None:intergenic | 30.0% | |
| TCTATGTTGGTGTAAATTTC+TGG | - | chr6.1:79139781-79139800 | MS.gene064020:intron | 30.0% | |
| TGTCTTGTGAATAAAGGAAA+AGG | - | chr6.1:79139885-79139904 | MS.gene064020:intron | 30.0% | |
| TTCCTAATAACTTCAAATGG+TGG | + | chr6.1:79140146-79140165 | None:intergenic | 30.0% | |
| TTCTTGTATGGAAACTATGA+CGG | - | chr6.1:79139732-79139751 | MS.gene064020:intron | 30.0% | |
| ! | AACCACCATTTGAAGTTATT+AGG | - | chr6.1:79140141-79140160 | MS.gene064020:intron | 30.0% |
| ! | ATTGGTTCATTTAATGGAAG+TGG | - | chr6.1:79140011-79140030 | MS.gene064020:intron | 30.0% |
| ! | TCTGTGTACTCAAAATTTTC+TGG | + | chr6.1:79139507-79139526 | None:intergenic | 30.0% |
| ! | TGATGCTTCATACTTTTATG+TGG | - | chr6.1:79139407-79139426 | MS.gene064020:CDS | 30.0% |
| !! | AAATTTTGAGTACACAGATG+AGG | - | chr6.1:79139509-79139528 | MS.gene064020:CDS | 30.0% |
| !!! | ACGATGTCAACGAATTTTTT+CGG | + | chr6.1:79138750-79138769 | None:intergenic | 30.0% |
| AGTTCCAAAGCTGAGATAAA+AGG | + | chr6.1:79139915-79139934 | None:intergenic | 35.0% | |
| ATACCATCTTCTTCAGATGT+TGG | + | chr6.1:79140494-79140513 | None:intergenic | 35.0% | |
| ATACTTGTACTTTGCAGAAG+TGG | - | chr6.1:79140244-79140263 | MS.gene064020:intron | 35.0% | |
| ATCTCCACTGCATTAAGTAT+AGG | + | chr6.1:79140443-79140462 | None:intergenic | 35.0% | |
| CAATTAATCGGTAACAGTTC+CGG | + | chr6.1:79139674-79139693 | None:intergenic | 35.0% | |
| CCAACATAGAGATCAAATTC+AGG | + | chr6.1:79139771-79139790 | None:intergenic | 35.0% | |
| CCTGAATTTGATCTCTATGT+TGG | - | chr6.1:79139768-79139787 | MS.gene064020:intron | 35.0% | |
| CGATTTGTCAATGTCATGTT+TGG | - | chr6.1:79139369-79139388 | MS.gene064020:CDS | 35.0% | |
| GAATTCAACGTATCTTGGAA+TGG | - | chr6.1:79140293-79140312 | MS.gene064020:intron | 35.0% | |
| GATTCTCTTGTAGAAGTTGA+TGG | + | chr6.1:79138619-79138638 | None:intergenic | 35.0% | |
| TACTCTAATCGTCTCACAAT+AGG | - | chr6.1:79138843-79138862 | MS.gene064020:CDS | 35.0% | |
| TGAGAGAATTCAACGTATCT+TGG | - | chr6.1:79140288-79140307 | MS.gene064020:intron | 35.0% | |
| TGCATTGGAAATAATCAGCA+CGG | - | chr6.1:79139839-79139858 | MS.gene064020:intron | 35.0% | |
| TGTGTTTAATTCGAAGTCGT+TGG | - | chr6.1:79140364-79140383 | MS.gene064020:intron | 35.0% | |
| ! | AACTCCTTTTATCTCAGCTT+TGG | - | chr6.1:79139908-79139927 | MS.gene064020:intron | 35.0% |
| ! | AACTGTTACCGATTAATTGC+CGG | - | chr6.1:79139675-79139694 | MS.gene064020:intron | 35.0% |
| ! | ATGTAAACTGCCTTTTGTTC+CGG | + | chr6.1:79139697-79139716 | None:intergenic | 35.0% |
| ! | CTTTTCAAAAGATGGGACAT+TGG | - | chr6.1:79139993-79140012 | MS.gene064020:intron | 35.0% |
| ! | CTTTTGTTCCGGCAATTAAT+CGG | + | chr6.1:79139686-79139705 | None:intergenic | 35.0% |
| !! | TCTGATTTTGGCAAAAGTCA+CGG | - | chr6.1:79138714-79138733 | MS.gene064020:CDS | 35.0% |
| !! | TGGGACATTGGTTCATTTAA+TGG | - | chr6.1:79140005-79140024 | MS.gene064020:intron | 35.0% |
| !! | TTCATAAGCATTGATTGTGG+TGG | - | chr6.1:79139480-79139499 | MS.gene064020:CDS | 35.0% |
| !!! | TCATTCTGCTTCTCGTTTTT+TGG | - | chr6.1:79138542-79138561 | MS.gene064020:CDS | 35.0% |
| CGACTTCGAATTAAACACAG+TGG | + | chr6.1:79140363-79140382 | None:intergenic | 40.0% | |
| CGATTAATTGCCGGAACAAA+AGG | - | chr6.1:79139684-79139703 | MS.gene064020:intron | 40.0% | |
| CTTCCAACATCTGAAGAAGA+TGG | - | chr6.1:79140488-79140507 | MS.gene064020:CDS | 40.0% | |
| GAGAGTGGATATGGTAGATT+AGG | + | chr6.1:79139624-79139643 | None:intergenic | 40.0% | |
| GATGGACCTTACATACAAAC+AGG | - | chr6.1:79139555-79139574 | MS.gene064020:CDS | 40.0% | |
| GCTTATAGATTTCCATGACG+AGG | + | chr6.1:79140084-79140103 | None:intergenic | 40.0% | |
| GGATGTTGTTAAACACGTGT+TGG | + | chr6.1:79139268-79139287 | None:intergenic | 40.0% | |
| GTTCATGCACAACAACAAAC+AGG | - | chr6.1:79138583-79138602 | MS.gene064020:CDS | 40.0% | |
| TCCACCTATACTTAATGCAG+TGG | - | chr6.1:79140436-79140455 | MS.gene064020:intron | 40.0% | |
| TCCACTGCATTAAGTATAGG+TGG | + | chr6.1:79140440-79140459 | None:intergenic | 40.0% | |
| TGCTTCAGAACAAGTTGCAT+TGG | - | chr6.1:79139824-79139843 | MS.gene064020:intron | 40.0% | |
| ! | TCATGGAGTCACTCTGATTT+TGG | - | chr6.1:79138702-79138721 | MS.gene064020:CDS | 40.0% |
| !! | AAACTTCTGAGATCTGAGAG+TGG | + | chr6.1:79139639-79139658 | None:intergenic | 40.0% |
| !! | AGGTGGAAGTGTTGAATCTT+CGG | + | chr6.1:79140423-79140442 | None:intergenic | 40.0% |
| !! | GGCTTCATAAGCATTGATTG+TGG | - | chr6.1:79139477-79139496 | MS.gene064020:CDS | 40.0% |
| !!! | CTGCTTCTCGTTTTTTGGTT+TGG | - | chr6.1:79138547-79138566 | MS.gene064020:CDS | 40.0% |
| CGTTGGTCGCAAATGAACAT+CGG | - | chr6.1:79140381-79140400 | MS.gene064020:intron | 45.0% | |
| CTGAGATCTGAGAGTGGATA+TGG | + | chr6.1:79139633-79139652 | None:intergenic | 45.0% | |
| GTGGTTGCTTGCAAGTATCT+TGG | + | chr6.1:79140344-79140363 | None:intergenic | 45.0% | |
| TTAGGAATGCAGCTACACCA+AGG | - | chr6.1:79140159-79140178 | MS.gene064020:intron | 45.0% | |
| TTCCATGACGAGGAATTCAG+CGG | + | chr6.1:79140074-79140093 | None:intergenic | 45.0% | |
| ! | GAAGTTTTCCTCGTGGAAAC+CGG | - | chr6.1:79139652-79139671 | MS.gene064020:intron | 45.0% |
| ! | GATCTCAGAAGTTTTCCTCG+TGG | - | chr6.1:79139645-79139664 | MS.gene064020:intron | 45.0% |
| CACATGTGTCCGTGTCATGT+TGG | + | chr6.1:79139299-79139318 | None:intergenic | 50.0% | |
| TAACAGTTCCGGTTTCCACG+AGG | + | chr6.1:79139663-79139682 | None:intergenic | 50.0% | |
| TACCGCTGAATTCCTCGTCA+TGG | - | chr6.1:79140069-79140088 | MS.gene064020:intron | 50.0% | |
| CGCGTGACACCAACATGACA+CGG | - | chr6.1:79139287-79139306 | MS.gene064020:CDS | 55.0% | |
| !! | CGTGTCATGTTGGTGTCACG+CGG | + | chr6.1:79139289-79139308 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 79138523 | 79140553 | 79138523 | ID=MS.gene064020 |
| chr6.1 | mRNA | 79138523 | 79140553 | 79138523 | ID=MS.gene064020.t1;Parent=MS.gene064020 |
| chr6.1 | exon | 79140472 | 79140553 | 79140472 | ID=MS.gene064020.t1.exon1;Parent=MS.gene064020.t1 |
| chr6.1 | CDS | 79140472 | 79140553 | 79140472 | ID=cds.MS.gene064020.t1;Parent=MS.gene064020.t1 |
| chr6.1 | exon | 79138523 | 79139598 | 79138523 | ID=MS.gene064020.t1.exon2;Parent=MS.gene064020.t1 |
| chr6.1 | CDS | 79138523 | 79139598 | 79138523 | ID=cds.MS.gene064020.t1;Parent=MS.gene064020.t1 |
| Gene Sequence |
| Protein sequence |
