Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065908.t1 | XP_013456645.1 | 91.1 | 819 | 73 | 0 | 1 | 819 | 1 | 819 | 1.30E-198 | 703.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065908.t1 | Q9M8T5 | 46.0 | 767 | 378 | 10 | 32 | 796 | 31 | 763 | 2.5e-44 | 182.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065908.t1 | A0A072UMR5 | 91.1 | 819 | 73 | 0 | 1 | 819 | 1 | 819 | 9.6e-199 | 703.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049178 | MS.gene065908 | 0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene065908 | 0.813307 | 2.73E-51 | -1.69E-46 |
| MS.gene050376 | MS.gene065908 | 0.808955 | 2.40E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene065908 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene065908 | 0.847186 | 1.36E-59 | -1.69E-46 |
| MS.gene050762 | MS.gene065908 | 0.810461 | 1.14E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene065908 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene065908 | 0.809828 | 1.56E-50 | -1.69E-46 |
| MS.gene051790 | MS.gene065908 | 0.810763 | 9.80E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene065908 | 0.822157 | 2.75E-53 | -1.69E-46 |
| MS.gene053147 | MS.gene065908 | 0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene053164 | MS.gene065908 | 0.80568 | 1.19E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene065908 | 0.822417 | 2.40E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene065908 | 0.826235 | 3.03E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene065908 | 0.824748 | 6.82E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene065908 | 0.803737 | 3.02E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene065908 | 0.843874 | 1.07E-58 | -1.69E-46 |
| MS.gene055861 | MS.gene065908 | -0.866543 | 2.64E-65 | -1.69E-46 |
| MS.gene055864 | MS.gene065908 | 0.823901 | 1.08E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene065908 | 0.805194 | 1.50E-49 | -1.69E-46 |
| MS.gene058543 | MS.gene065908 | 0.806083 | 9.77E-50 | -1.69E-46 |
| MS.gene059664 | MS.gene065908 | 0.803989 | 2.68E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene065908 | 0.837026 | 6.62E-57 | -1.69E-46 |
| MS.gene060122 | MS.gene065908 | -0.831163 | 1.95E-55 | -1.69E-46 |
| MS.gene060125 | MS.gene065908 | -0.832949 | 7.06E-56 | -1.69E-46 |
| MS.gene060167 | MS.gene065908 | 0.817858 | 2.65E-52 | -1.69E-46 |
| MS.gene060380 | MS.gene065908 | 0.845759 | 3.32E-59 | -1.69E-46 |
| MS.gene060400 | MS.gene065908 | 0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene065908 | 0.866251 | 3.27E-65 | -1.69E-46 |
| MS.gene060637 | MS.gene065908 | 0.825228 | 5.26E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065908.t1 | MTR_4g478190 | 97.086 | 858 | 25 | 0 | 1 | 858 | 1 | 858 | 0.0 | 1627 |
| MS.gene065908.t1 | MTR_5g007350 | 65.385 | 884 | 251 | 14 | 2 | 856 | 26 | 883 | 0.0 | 988 |
| MS.gene065908.t1 | MTR_3g086890 | 30.398 | 352 | 218 | 5 | 312 | 663 | 83 | 407 | 3.08e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065908.t1 | AT5G16730 | 52.674 | 860 | 356 | 19 | 20 | 858 | 24 | 853 | 0.0 | 638 |
| MS.gene065908.t1 | AT3G02930 | 51.225 | 857 | 360 | 14 | 6 | 858 | 2 | 804 | 0.0 | 599 |
| MS.gene065908.t1 | AT3G02930 | 51.276 | 862 | 360 | 15 | 1 | 858 | 1 | 806 | 0.0 | 599 |
| MS.gene065908.t1 | AT3G02930 | 51.276 | 862 | 360 | 15 | 1 | 858 | 1 | 806 | 0.0 | 599 |
| MS.gene065908.t1 | AT1G65010 | 53.120 | 625 | 290 | 2 | 33 | 656 | 30 | 652 | 6.30e-175 | 541 |
| MS.gene065908.t1 | AT4G27595 | 49.073 | 701 | 329 | 9 | 1 | 690 | 1 | 684 | 2.74e-170 | 526 |
| MS.gene065908.t1 | AT4G27595 | 49.275 | 690 | 328 | 8 | 6 | 690 | 3 | 675 | 1.14e-169 | 524 |
| MS.gene065908.t1 | AT4G40020 | 30.078 | 256 | 168 | 2 | 404 | 659 | 123 | 367 | 4.50e-13 | 73.6 |
| MS.gene065908.t1 | AT2G37080 | 27.835 | 388 | 173 | 16 | 17 | 389 | 17 | 312 | 7.81e-13 | 72.8 |
| MS.gene065908.t1 | AT2G37080 | 27.835 | 388 | 173 | 16 | 17 | 389 | 17 | 312 | 7.81e-13 | 72.8 |
| MS.gene065908.t1 | AT2G37080 | 27.649 | 387 | 173 | 15 | 17 | 389 | 17 | 310 | 1.00e-12 | 72.4 |
Find 157 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATGTTGTTTCTATTTC+TGG | 0.107855 | 4.1:+27132558 | None:intergenic |
| AAAGCTTTGCTTGGAAAATT+TGG | 0.148163 | 4.1:-27132611 | MS.gene065908:CDS |
| TTCATGCTCAGTGTGATTTC+TGG | 0.166546 | 4.1:+27133141 | None:intergenic |
| CTGCTTTCAACTTCAATATA+AGG | 0.227623 | 4.1:+27134349 | None:intergenic |
| TCAGAAAATTCAACGACTTT+AGG | 0.228754 | 4.1:+27133076 | None:intergenic |
| GATTTGAAGTTAGTCTTAAA+AGG | 0.240438 | 4.1:-27133637 | MS.gene065908:CDS |
| TTGCTAACTTTACTTACTTT+TGG | 0.242464 | 4.1:+27136093 | None:intergenic |
| TCAATGAATTGGAGAATTCT+AGG | 0.267794 | 4.1:-27133798 | MS.gene065908:CDS |
| GAGAGCTTTGATAAGATAAA+TGG | 0.293654 | 4.1:-27132716 | MS.gene065908:CDS |
| GAGTTGCACGATTGAGAAAA+AGG | 0.311057 | 4.1:-27132828 | MS.gene065908:CDS |
| CCTTCTCCTTCTCAGCTTGA+AGG | 0.311769 | 4.1:+27134808 | None:intergenic |
| TTCAGAACGCCGTCTTCTTA+TGG | 0.322768 | 4.1:-27133971 | MS.gene065908:CDS |
| TCTTTGCTCTCATCTTCCTT+TGG | 0.336435 | 4.1:+27132890 | None:intergenic |
| GAAGAGAATGGTCATGGATA+TGG | 0.341434 | 4.1:-27133055 | MS.gene065908:CDS |
| GTTGCTTAGAAAATTCTCTT+TGG | 0.347577 | 4.1:+27133696 | None:intergenic |
| TCTGAACCCTTTGCAGCTCT+TGG | 0.352340 | 4.1:+27134888 | None:intergenic |
| AAACAAACTCATCAATGAAT+TGG | 0.355092 | 4.1:-27133809 | MS.gene065908:CDS |
| AATCACACTGAGCATGAAAA+TGG | 0.356757 | 4.1:-27133136 | MS.gene065908:CDS |
| CTGAGCTTCTTCGTCCCTAT+TGG | 0.359876 | 4.1:+27133381 | None:intergenic |
| GGAGGAGTTGTCAAAGTTAC+TGG | 0.363861 | 4.1:-27133176 | MS.gene065908:CDS |
| AAAATTCCGAGCTGTTGAAT+TGG | 0.372773 | 4.1:-27134673 | MS.gene065908:CDS |
| TGGCGACTCAGATGCTGATT+TGG | 0.373526 | 4.1:+27136062 | None:intergenic |
| CTCCACCTTCTTAATAGATT+CGG | 0.382117 | 4.1:+27133195 | None:intergenic |
| AGGGAAAGCTCAACAACCTT+TGG | 0.390841 | 4.1:+27133019 | None:intergenic |
| TTCCTTAACTGCCTCAAGTT+CGG | 0.393340 | 4.1:+27133900 | None:intergenic |
| TTTGAGTTCTTCCTGATTGA+GGG | 0.393979 | 4.1:+27133000 | None:intergenic |
| TTTGAGCCACCAATGCTGCC+TGG | 0.397662 | 4.1:+27134724 | None:intergenic |
| CAATATAAGGTTATTATCAC+TGG | 0.402454 | 4.1:+27134362 | None:intergenic |
| AGGAAGAATCAAATGCCAAT+AGG | 0.404807 | 4.1:-27133396 | MS.gene065908:CDS |
| GAAACTGAAGGAGAATATAT+TGG | 0.409904 | 4.1:-27133278 | MS.gene065908:CDS |
| TGTTGCCGGTGGTGCTTTGT+TGG | 0.413551 | 4.1:+27136116 | None:intergenic |
| GCTGATTTCCGCTCAACAGC+TGG | 0.414676 | 4.1:+27135979 | None:intergenic |
| GCATGAAAATGGTGATCTTT+CGG | 0.415307 | 4.1:-27133125 | MS.gene065908:CDS |
| GCCTCTGGAAGTTCTCTCTC+TGG | 0.419412 | 4.1:+27132791 | None:intergenic |
| ATCCGAACTTGAGGCAGTTA+AGG | 0.419625 | 4.1:-27133902 | MS.gene065908:CDS |
| TGGTGCTTTGTTGGAATTGT+CGG | 0.419748 | 4.1:+27136125 | None:intergenic |
| TCTTCCAATGATTTAGCCTC+TGG | 0.426077 | 4.1:+27132776 | None:intergenic |
| CTAACTTCAAATCTTCAATC+TGG | 0.431089 | 4.1:+27133647 | None:intergenic |
| CCGAGCTGTTGAATTGGAAC+AGG | 0.431367 | 4.1:-27134667 | MS.gene065908:CDS |
| CATAGCTTTCCCTTTCAGCT+TGG | 0.431387 | 4.1:+27133674 | None:intergenic |
| TGTTGAGCTTTCCCTCAATC+AGG | 0.432554 | 4.1:-27133011 | MS.gene065908:CDS |
| TCAGATGCTGATTTGGTCAC+TGG | 0.435750 | 4.1:+27136069 | None:intergenic |
| GTTATAGAGAACATTGATAA+TGG | 0.439389 | 4.1:-27132686 | MS.gene065908:CDS |
| GAGCTTCTCATTTGCTTCCT+CGG | 0.442024 | 4.1:+27134746 | None:intergenic |
| GTTTGAGTTCTTCCTGATTG+AGG | 0.445779 | 4.1:+27132999 | None:intergenic |
| CCTAAACCTGTGAAAATGAA+TGG | 0.446361 | 4.1:-27132917 | MS.gene065908:CDS |
| ACTTCCAGAGGCTAAATCAT+TGG | 0.450557 | 4.1:-27132780 | MS.gene065908:CDS |
| ACATCTGCAGGAAGCTCTAA+AGG | 0.462504 | 4.1:-27133320 | MS.gene065908:CDS |
| GAGATCTGCATCAGAATCCT+TGG | 0.462775 | 4.1:-27134124 | MS.gene065908:CDS |
| CTCAAGCTCCTCAGTGGTTG+AGG | 0.472269 | 4.1:+27134551 | None:intergenic |
| TCTAAGCAACCAAGCTGAAA+GGG | 0.473285 | 4.1:-27133683 | MS.gene065908:CDS |
| GGAAGCTTGCTCAAGAAGAA+AGG | 0.475338 | 4.1:-27132590 | MS.gene065908:CDS |
| AGCTGAATTGACACAGTTGA+AGG | 0.478624 | 4.1:-27134415 | MS.gene065908:CDS |
| GGCTCAAAAGCAGGCTAAAG+AGG | 0.482156 | 4.1:-27134709 | MS.gene065908:CDS |
| AAGAAGAAGAAAGCTTTGCT+TGG | 0.483792 | 4.1:-27132620 | MS.gene065908:CDS |
| TGGCTTCAAAATCAAGTACT+AGG | 0.484924 | 4.1:-27136749 | MS.gene065908:intron |
| AGGAAGATGAGAGCAAAGAA+AGG | 0.487813 | 4.1:-27132886 | MS.gene065908:CDS |
| GGAAGAATCAAATGCCAATA+GGG | 0.488686 | 4.1:-27133395 | MS.gene065908:CDS |
| TAGATTCGGTTTCCCTAGCT+CGG | 0.488823 | 4.1:+27133209 | None:intergenic |
| CATCAGCATGATTTAATGCC+TGG | 0.490454 | 4.1:+27134487 | None:intergenic |
| ATCAATGTTCTCTATAACAG+TGG | 0.492151 | 4.1:+27132691 | None:intergenic |
| AGCATTGGTGGCTCAAAAGC+AGG | 0.492354 | 4.1:-27134718 | MS.gene065908:CDS |
| AAAACGATGAACTCCGAGCT+AGG | 0.492776 | 4.1:-27133222 | MS.gene065908:CDS |
| CTGCTTCATTACAGATTCCA+AGG | 0.493723 | 4.1:+27134107 | None:intergenic |
| AGAAGCACAAAGAGTGGCCG+AGG | 0.498602 | 4.1:-27134763 | MS.gene065908:CDS |
| GAAGCTCCAGGCAGCATTGG+TGG | 0.499796 | 4.1:-27134730 | MS.gene065908:CDS |
| ACAAGCTCCAAGAGCTGCAA+AGG | 0.501010 | 4.1:-27134895 | MS.gene065908:CDS |
| AGTTAAGGAACTAGAAATGA+GGG | 0.504114 | 4.1:-27134169 | MS.gene065908:CDS |
| TTCTAAGCAACCAAGCTGAA+AGG | 0.505989 | 4.1:-27133684 | MS.gene065908:CDS |
| TGAGAAGCTCCAGGCAGCAT+TGG | 0.514376 | 4.1:-27134733 | MS.gene065908:CDS |
| CTATTATTGCTTACATCAGG+TGG | 0.516293 | 4.1:+27135940 | None:intergenic |
| GAGAATGGTCATGGATATGG+AGG | 0.517496 | 4.1:-27133052 | MS.gene065908:CDS |
| GCAAAATTCACGTCTTTCTG+TGG | 0.518226 | 4.1:-27136031 | MS.gene065908:CDS |
| GACCGAGGCTATACATCTGC+AGG | 0.523479 | 4.1:-27133332 | MS.gene065908:CDS |
| TGAAGAAGAGAATGCGGCCG+CGG | 0.524949 | 4.1:-27133461 | MS.gene065908:CDS |
| TTCTTGTGTTGAATCTAGCA+AGG | 0.527152 | 4.1:+27134392 | None:intergenic |
| GGTTGAAGAATCAAACAAGT+TGG | 0.530427 | 4.1:-27134148 | MS.gene065908:CDS |
| GCAGATCCTTCAAGCTGAGA+AGG | 0.531854 | 4.1:-27134814 | MS.gene065908:CDS |
| CAATTCCAACAAAGCACCAC+CGG | 0.535286 | 4.1:-27136121 | MS.gene065908:CDS |
| GGAAGCAAATGAGAAGCTCC+AGG | 0.537000 | 4.1:-27134742 | MS.gene065908:CDS |
| AACCACTGAGGAGCTTGAGC+GGG | 0.538320 | 4.1:-27134547 | MS.gene065908:CDS |
| AAGTTAAGGAACTAGAAATG+AGG | 0.538694 | 4.1:-27134170 | MS.gene065908:CDS |
| CTCAGTGGTTGAGGCAAGAG+TGG | 0.539143 | 4.1:+27134560 | None:intergenic |
| GGACGAAGAAGCTCAGTTGA+AGG | 0.541111 | 4.1:-27133374 | MS.gene065908:CDS |
| TGAATAAGAAGGAAGAAGAA+TGG | 0.541280 | 4.1:-27134629 | MS.gene065908:CDS |
| AGAGGCTAAATCATTGGAAG+AGG | 0.542206 | 4.1:-27132774 | MS.gene065908:CDS |
| AGTTAAGGAAGAGAAAGATC+AGG | 0.542809 | 4.1:-27133887 | MS.gene065908:CDS |
| TGCTACTCTTAAAGAGAAGG+TGG | 0.543694 | 4.1:-27134040 | MS.gene065908:CDS |
| TGATCTTTCGGACAGCGAAA+AGG | 0.544136 | 4.1:-27133113 | MS.gene065908:CDS |
| ACGCCGTCTTCTTATGGCTA+AGG | 0.545598 | 4.1:-27133965 | MS.gene065908:CDS |
| GCTGTTGAATTGGAACAGGC+TGG | 0.548085 | 4.1:-27134663 | MS.gene065908:CDS |
| TGGCCACATCCAAGGCATGC+TGG | 0.548388 | 4.1:+27134580 | None:intergenic |
| GGAAACCGAATCTATTAAGA+AGG | 0.549696 | 4.1:-27133200 | MS.gene065908:CDS |
| GGCTTTGAATTCACAGATCG+TGG | 0.550956 | 4.1:+27136000 | None:intergenic |
| TGTGAGGAACCAGCATGCCT+TGG | 0.551371 | 4.1:-27134589 | MS.gene065908:CDS |
| GCTTACATCAGGTGGGGTGG+CGG | 0.552794 | 4.1:+27135948 | None:intergenic |
| CAATGAATTGGAGAATTCTA+GGG | 0.553198 | 4.1:-27133797 | MS.gene065908:CDS |
| TATTATTGCTTACATCAGGT+GGG | 0.554905 | 4.1:+27135941 | None:intergenic |
| AATTGAAACTGTGAATAAGA+AGG | 0.556477 | 4.1:-27134640 | MS.gene065908:CDS |
| GGAAGATGAGAGCAAAGAAA+GGG | 0.556487 | 4.1:-27132885 | MS.gene065908:CDS |
| CAACCACTGAGGAGCTTGAG+CGG | 0.561441 | 4.1:-27134548 | MS.gene065908:CDS |
| CTTCCTTAGCCATAAGAAGA+CGG | 0.564152 | 4.1:+27133962 | None:intergenic |
| ACTGAGTCAAAGACAGAAGA+AGG | 0.566826 | 4.1:-27132749 | MS.gene065908:CDS |
| TACTTTCTCAGCATGAACCT+CGG | 0.567598 | 4.1:+27134449 | None:intergenic |
| TGAAAAGTCAAAGAAGATTG+AGG | 0.568592 | 4.1:-27133932 | MS.gene065908:CDS |
| TGGTCATGGATATGGAGGAG+AGG | 0.569474 | 4.1:-27133047 | MS.gene065908:CDS |
| GGCAAGAGTGGCCACATCCA+AGG | 0.575724 | 4.1:+27134572 | None:intergenic |
| AAGAAGTAGAATTCAAAATG+TGG | 0.576268 | 4.1:-27132853 | MS.gene065908:CDS |
| CGAATCTATTAAGAAGGTGG+AGG | 0.576635 | 4.1:-27133194 | MS.gene065908:CDS |
| AAACGATGAACTCCGAGCTA+GGG | 0.576737 | 4.1:-27133221 | MS.gene065908:CDS |
| AGAAGTAGAATTCAAAATGT+GGG | 0.576995 | 4.1:-27132852 | MS.gene065908:CDS |
| TGAGAACTCGAAGGCTGAGT+GGG | 0.577593 | 4.1:-27133524 | MS.gene065908:CDS |
| GTTCTTAGCATCACACATCA+TGG | 0.582449 | 4.1:+27134509 | None:intergenic |
| AGCTGCTACTCTTAAAGAGA+AGG | 0.582698 | 4.1:-27134043 | MS.gene065908:CDS |
| ATTATTGCTTACATCAGGTG+GGG | 0.583904 | 4.1:+27135942 | None:intergenic |
| ATAGAGAACATTGATAATGG+TGG | 0.585848 | 4.1:-27132683 | MS.gene065908:CDS |
| GCTTTGTTGGAATTGTCGGA+TGG | 0.586226 | 4.1:+27136129 | None:intergenic |
| TTATGCAAACAGTCTGCTTG+AGG | 0.587993 | 4.1:-27134205 | MS.gene065908:CDS |
| AGAAGATCTAAAGAAAGCAA+AGG | 0.589350 | 4.1:-27134838 | MS.gene065908:CDS |
| ATGTAGAACTTGAAACCTCA+AGG | 0.589981 | 4.1:-27134239 | MS.gene065908:CDS |
| GAACCAGCATGCCTTGGATG+TGG | 0.590468 | 4.1:-27134583 | MS.gene065908:CDS |
| AAGACAGAAGAAGGTGGTGA+TGG | 0.591342 | 4.1:-27132740 | MS.gene065908:CDS |
| AGGGAATGAGTTATGATGAG+AGG | 0.592178 | 4.1:-27134296 | MS.gene065908:CDS |
| TTCCTGCAGATGTATAGCCT+CGG | 0.594105 | 4.1:+27133330 | None:intergenic |
| GCGTTCTGAATCCTCAAGAT+CGG | 0.596202 | 4.1:+27133984 | None:intergenic |
| GGCTCTTGAATCCGAACTTG+AGG | 0.596607 | 4.1:-27133911 | MS.gene065908:CDS |
| TCAGTTGAAGGAAAATCTGA+AGG | 0.598448 | 4.1:-27133362 | MS.gene065908:CDS |
| CAAGCTCCAAGAGCTGCAAA+GGG | 0.600838 | 4.1:-27134894 | MS.gene065908:CDS |
| CAAACAGTCTGCTTGAGGAG+TGG | 0.607787 | 4.1:-27134200 | MS.gene065908:CDS |
| CCTGTTCCAATTCAACAGCT+CGG | 0.607837 | 4.1:+27134667 | None:intergenic |
| GTCTGAGAACGTGAAACTGA+AGG | 0.607986 | 4.1:-27133290 | MS.gene065908:CDS |
| CCTTCAAGCTGAGAAGGAGA+AGG | 0.610724 | 4.1:-27134808 | MS.gene065908:CDS |
| GAAAATGAATGGAAAACCAA+AGG | 0.613917 | 4.1:-27132906 | MS.gene065908:CDS |
| ATTGCTTACATCAGGTGGGG+TGG | 0.615277 | 4.1:+27135945 | None:intergenic |
| GAATGTGTTTGAGAACTCGA+AGG | 0.623748 | 4.1:-27133533 | MS.gene065908:CDS |
| AACCGAATCTATTAAGAAGG+TGG | 0.624602 | 4.1:-27133197 | MS.gene065908:CDS |
| TAATAGGGTCTGCACATGAG+AGG | 0.625836 | 4.1:+27133840 | None:intergenic |
| AACCCGCTCAAGCTCCTCAG+TGG | 0.633744 | 4.1:+27134545 | None:intergenic |
| CTCAAGAAAGAACTCGACAA+GGG | 0.633999 | 4.1:-27134315 | MS.gene065908:CDS |
| TCTCAAGAAAGAACTCGACA+AGG | 0.634380 | 4.1:-27134316 | MS.gene065908:CDS |
| ATAAGATTCAGCCGTCCTTG+AGG | 0.647778 | 4.1:+27134224 | None:intergenic |
| TTATTTGCTTAAACAAACTG+AGG | 0.648313 | 4.1:-27133416 | MS.gene065908:CDS |
| TTGAGAACTCGAAGGCTGAG+TGG | 0.651278 | 4.1:-27133525 | MS.gene065908:CDS |
| GTTGAAAGAAGCACAAAGAG+TGG | 0.652851 | 4.1:-27134769 | MS.gene065908:CDS |
| TGGAGGAGAGGAAATTCCAA+AGG | 0.653330 | 4.1:-27133035 | MS.gene065908:CDS |
| ATTCAAAGCCAGCTGTTGAG+CGG | 0.660562 | 4.1:-27135987 | MS.gene065908:CDS |
| GCTACTCTTAAAGAGAAGGT+GGG | 0.661481 | 4.1:-27134039 | MS.gene065908:CDS |
| AGCTTGCTCAAGAAGAAAGG+TGG | 0.662119 | 4.1:-27132587 | MS.gene065908:CDS |
| GAAAACTGAAGAAGAGAATG+CGG | 0.663328 | 4.1:-27133467 | MS.gene065908:CDS |
| AGTCAATGCTTGATGAAGCG+CGG | 0.666394 | 4.1:-27133597 | MS.gene065908:CDS |
| TGATGCAGCTAAAGTTGCCG+AGG | 0.669959 | 4.1:-27134466 | MS.gene065908:CDS |
| AGAACTTGAAACCTCAAGGA+CGG | 0.671436 | 4.1:-27134235 | MS.gene065908:CDS |
| TCTGAAGGAAGTTGAGACCG+AGG | 0.687621 | 4.1:-27133347 | MS.gene065908:CDS |
| CACTCTTGCCTCAACCACTG+AGG | 0.695834 | 4.1:-27134559 | MS.gene065908:CDS |
| ACCAGAGAGAGAACTTCCAG+AGG | 0.698874 | 4.1:-27132792 | MS.gene065908:CDS |
| GATGTGTGATGCTAAGAACC+AGG | 0.701568 | 4.1:-27134505 | MS.gene065908:CDS |
| GAGTCAAAGACAGAAGAAGG+TGG | 0.711580 | 4.1:-27132746 | MS.gene065908:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAAACAAAAAAAAAA+TGG | + | chr4.1:27132684-27132703 | None:intergenic | 10.0% |
| !! | AAAAATAGTAATTGAAATGA+AGG | + | chr4.1:27133487-27133506 | None:intergenic | 15.0% |
| !!! | TAATAATTTGACATTTTTGT+GGG | - | chr4.1:27133608-27133627 | MS.gene065908:CDS | 15.0% |
| !!! | TCATTTCAATTACTATTTTT+GGG | - | chr4.1:27133487-27133506 | MS.gene065908:CDS | 15.0% |
| !!! | TTCATTTCAATTACTATTTT+TGG | - | chr4.1:27133486-27133505 | MS.gene065908:CDS | 15.0% |
| !!! | TTTTTTGTTTTACTTTTTGT+CGG | - | chr4.1:27132688-27132707 | MS.gene065908:CDS | 15.0% |
| !! | ATTATTGATATTATGAAGCA+CGG | - | chr4.1:27133979-27133998 | MS.gene065908:CDS | 20.0% |
| !! | ATTCTGTAATGTCTATTATT+TGG | - | chr4.1:27133671-27133690 | MS.gene065908:CDS | 20.0% |
| !! | CAACAATGTATTGTAAAATA+AGG | + | chr4.1:27132960-27132979 | None:intergenic | 20.0% |
| !! | CTATGTACAATTCAAAAATT+GGG | - | chr4.1:27132862-27132881 | MS.gene065908:CDS | 20.0% |
| !! | GGAAAAAGAAATAAATAGAT+TGG | - | chr4.1:27135881-27135900 | MS.gene065908:intron | 20.0% |
| !! | GTAAAATACTGTTAAACATA+AGG | + | chr4.1:27133731-27133750 | None:intergenic | 20.0% |
| !! | TCTATGTACAATTCAAAAAT+TGG | - | chr4.1:27132861-27132880 | MS.gene065908:CDS | 20.0% |
| !!! | AAATAAGAATTGTTTTCTTG+TGG | - | chr4.1:27133044-27133063 | MS.gene065908:CDS | 20.0% |
| !!! | AATAATTTGACATTTTTGTG+GGG | - | chr4.1:27133609-27133628 | MS.gene065908:CDS | 20.0% |
| !!! | CTAATAATTTGACATTTTTG+TGG | - | chr4.1:27133607-27133626 | MS.gene065908:CDS | 20.0% |
| !!! | TTTGTTTTTCTCTTCTAATA+GGG | + | chr4.1:27135499-27135518 | None:intergenic | 20.0% |
| ! | AAACAAACTCATCAATGAAT+TGG | - | chr4.1:27135512-27135531 | MS.gene065908:intron | 25.0% |
| ! | AAGAAGTAGAATTCAAAATG+TGG | - | chr4.1:27136468-27136487 | MS.gene065908:intron | 25.0% |
| ! | AATAGACATTACAGAATGAA+AGG | + | chr4.1:27133668-27133687 | None:intergenic | 25.0% |
| ! | AATCTATTATTGCTTACATC+AGG | + | chr4.1:27133387-27133406 | None:intergenic | 25.0% |
| ! | AATTGAAACTGTGAATAAGA+AGG | - | chr4.1:27134681-27134700 | MS.gene065908:CDS | 25.0% |
| ! | AGAAGAAGAAAAAAGCAAAA+AGG | - | chr4.1:27135548-27135567 | MS.gene065908:intron | 25.0% |
| ! | AGAAGTAGAATTCAAAATGT+GGG | - | chr4.1:27136469-27136488 | MS.gene065908:intron | 25.0% |
| ! | ATACTGTTAAGATCTGAATT+GGG | - | chr4.1:27132632-27132651 | MS.gene065908:CDS | 25.0% |
| ! | CAATATAAGGTTATTATCAC+TGG | + | chr4.1:27134962-27134981 | None:intergenic | 25.0% |
| ! | CTAGTAATTATGATATGCTA+TGG | - | chr4.1:27132743-27132762 | MS.gene065908:CDS | 25.0% |
| ! | GTTATAGAGAACATTGATAA+TGG | - | chr4.1:27136635-27136654 | MS.gene065908:intron | 25.0% |
| ! | TAAGTAAAAACAAGTGACAT+GGG | + | chr4.1:27134208-27134227 | None:intergenic | 25.0% |
| ! | TATACTGTTAAGATCTGAAT+TGG | - | chr4.1:27132631-27132650 | MS.gene065908:CDS | 25.0% |
| ! | TCAATTTCCAATCAAATAGA+TGG | + | chr4.1:27133077-27133096 | None:intergenic | 25.0% |
| ! | TGTAATGTCTATTATTTGGT+TGG | - | chr4.1:27133675-27133694 | MS.gene065908:CDS | 25.0% |
| ! | TGTACTTATTATGTATTGCT+TGG | - | chr4.1:27134391-27134410 | MS.gene065908:CDS | 25.0% |
| ! | TTAAGTAAAAACAAGTGACA+TGG | + | chr4.1:27134209-27134228 | None:intergenic | 25.0% |
| ! | TTATTTGCTTAAACAAACTG+AGG | - | chr4.1:27135905-27135924 | MS.gene065908:intron | 25.0% |
| !! | ATGTTCATCTGTTGAAATTT+TGG | - | chr4.1:27132816-27132835 | MS.gene065908:CDS | 25.0% |
| !! | ATTTTGAATTCTACTTCTTC+TGG | + | chr4.1:27136467-27136486 | None:intergenic | 25.0% |
| !! | TGATTTTGTACAATTAAGCT+TGG | - | chr4.1:27132930-27132949 | MS.gene065908:CDS | 25.0% |
| !! | TTGCTAACTTTACTTACTTT+TGG | + | chr4.1:27133231-27133250 | None:intergenic | 25.0% |
| !!! | GATTTGAAGTTAGTCTTAAA+AGG | - | chr4.1:27135684-27135703 | MS.gene065908:intron | 25.0% |
| !!! | GTTTGTTTTTCTCTTCTAAT+AGG | + | chr4.1:27135500-27135519 | None:intergenic | 25.0% |
| !!! | TCTATTTATTTCTTTTTCCG+CGG | + | chr4.1:27135880-27135899 | None:intergenic | 25.0% |
| !!! | TGTAATTTGTTTTTTGCTTG+AGG | - | chr4.1:27132711-27132730 | MS.gene065908:CDS | 25.0% |
| !!! | TTGTGTTTTGTTATCTTGAA+TGG | - | chr4.1:27133106-27133125 | MS.gene065908:CDS | 25.0% |
| AAAGCTTTGCTTGGAAAATT+TGG | - | chr4.1:27136710-27136729 | MS.gene065908:intron | 30.0% | |
| AAGTTAAGGAACTAGAAATG+AGG | - | chr4.1:27135151-27135170 | MS.gene065908:intron | 30.0% | |
| AATACTGTTAAACATAAGGC+AGG | + | chr4.1:27133727-27133746 | None:intergenic | 30.0% | |
| AATTAAGCATCCAGAATCAT+TGG | + | chr4.1:27133022-27133041 | None:intergenic | 30.0% | |
| AATTGACAGCAAAAAAGAAG+TGG | + | chr4.1:27133906-27133925 | None:intergenic | 30.0% | |
| AGAAAAAAGCAAAAAGGCAA+TGG | - | chr4.1:27135554-27135573 | MS.gene065908:intron | 30.0% | |
| AGAAGATCTAAAGAAAGCAA+AGG | - | chr4.1:27134483-27134502 | MS.gene065908:CDS | 30.0% | |
| AGTAAAATTCGACTCTTGAT+TGG | - | chr4.1:27134269-27134288 | MS.gene065908:CDS | 30.0% | |
| AGTTAAGGAACTAGAAATGA+GGG | - | chr4.1:27135152-27135171 | MS.gene065908:intron | 30.0% | |
| ATCAATGTTCTCTATAACAG+TGG | + | chr4.1:27136633-27136652 | None:intergenic | 30.0% | |
| CAATGAATTGGAGAATTCTA+GGG | - | chr4.1:27135524-27135543 | MS.gene065908:intron | 30.0% | |
| CACTAGATATTTGAATCAAC+TGG | + | chr4.1:27133795-27133814 | None:intergenic | 30.0% | |
| CTAACTTCAAATCTTCAATC+TGG | + | chr4.1:27135677-27135696 | None:intergenic | 30.0% | |
| CTGCTTTCAACTTCAATATA+AGG | + | chr4.1:27134975-27134994 | None:intergenic | 30.0% | |
| CTTAGATCCATCTATTTGAT+TGG | - | chr4.1:27133067-27133086 | MS.gene065908:CDS | 30.0% | |
| GAAAATGAATGGAAAACCAA+AGG | - | chr4.1:27136415-27136434 | MS.gene065908:intron | 30.0% | |
| GAAACTGAAGGAGAATATAT+TGG | - | chr4.1:27136043-27136062 | MS.gene065908:CDS | 30.0% | |
| GATTCAAGTCATAAACCAAA+TGG | + | chr4.1:27133955-27133974 | None:intergenic | 30.0% | |
| GTAAAATTCGACTCTTGATT+GGG | - | chr4.1:27134270-27134289 | MS.gene065908:CDS | 30.0% | |
| GTTGCTTAGAAAATTCTCTT+TGG | + | chr4.1:27135628-27135647 | None:intergenic | 30.0% | |
| TATTATTGCTTACATCAGGT+GGG | + | chr4.1:27133383-27133402 | None:intergenic | 30.0% | |
| TCAATGAATTGGAGAATTCT+AGG | - | chr4.1:27135523-27135542 | MS.gene065908:intron | 30.0% | |
| TCAGAAAATTCAACGACTTT+AGG | + | chr4.1:27136248-27136267 | None:intergenic | 30.0% | |
| TCATCTACTAATATGAAGCA+CGG | + | chr4.1:27134166-27134185 | None:intergenic | 30.0% | |
| TGAAAAGTCAAAGAAGATTG+AGG | - | chr4.1:27135389-27135408 | MS.gene065908:intron | 30.0% | |
| TGAATAAGAAGGAAGAAGAA+TGG | - | chr4.1:27134692-27134711 | MS.gene065908:CDS | 30.0% | |
| TGTCTATTATTTGGTTGGAT+TGG | - | chr4.1:27133680-27133699 | MS.gene065908:CDS | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | - | chr4.1:27134077-27134096 | MS.gene065908:CDS | 30.0% | |
| TTTCCAATTATTAGCTGTGT+CGG | + | chr4.1:27134046-27134065 | None:intergenic | 30.0% | |
| ! | GAGAGCTTTGATAAGATAAA+TGG | - | chr4.1:27136605-27136624 | MS.gene065908:intron | 30.0% |
| ! | TCTCTTCTTCAGTTTTCTTT+AGG | + | chr4.1:27135851-27135870 | None:intergenic | 30.0% |
| ! | TTATCATGCTCTCTTTTGAA+AGG | - | chr4.1:27134353-27134372 | MS.gene065908:CDS | 30.0% |
| !! | ATAGAGAACATTGATAATGG+TGG | - | chr4.1:27136638-27136657 | MS.gene065908:intron | 30.0% |
| !! | GTTGAATTTTCTGAAGAGAA+TGG | - | chr4.1:27136254-27136273 | MS.gene065908:intron | 30.0% |
| !! | TATTATTTGGTTGGATTGGT+TGG | - | chr4.1:27133684-27133703 | MS.gene065908:CDS | 30.0% |
| !! | TGTTGTTGTTCTTCTTTTAC+TGG | + | chr4.1:27136671-27136690 | None:intergenic | 30.0% |
| !!! | AATTTGTTTTTTGCTTGAGG+AGG | - | chr4.1:27132714-27132733 | MS.gene065908:CDS | 30.0% |
| !!! | GAATGGTGTGTTACTTTTAA+TGG | - | chr4.1:27133123-27133142 | MS.gene065908:CDS | 30.0% |
| !!! | GTGTGTTACTTTTAATGGTT+TGG | - | chr4.1:27133128-27133147 | MS.gene065908:CDS | 30.0% |
| AAAATTCCGAGCTGTTGAAT+TGG | - | chr4.1:27134648-27134667 | MS.gene065908:CDS | 35.0% | |
| AACCGAATCTATTAAGAAGG+TGG | - | chr4.1:27136124-27136143 | MS.gene065908:CDS | 35.0% | |
| AAGAAGAAGAAAGCTTTGCT+TGG | - | chr4.1:27136701-27136720 | MS.gene065908:intron | 35.0% | |
| AATCACACTGAGCATGAAAA+TGG | - | chr4.1:27136185-27136204 | MS.gene065908:intron | 35.0% | |
| AGGAAGAATCAAATGCCAAT+AGG | - | chr4.1:27135925-27135944 | MS.gene065908:intron | 35.0% | |
| AGTTAAGGAAGAGAAAGATC+AGG | - | chr4.1:27135434-27135453 | MS.gene065908:intron | 35.0% | |
| ATGTAGAACTTGAAACCTCA+AGG | - | chr4.1:27135082-27135101 | MS.gene065908:intron | 35.0% | |
| ATTATTGCTTACATCAGGTG+GGG | + | chr4.1:27133382-27133401 | None:intergenic | 35.0% | |
| CCTAAACCTGTGAAAATGAA+TGG | - | chr4.1:27136404-27136423 | MS.gene065908:intron | 35.0% | |
| CTATTATTGCTTACATCAGG+TGG | + | chr4.1:27133384-27133403 | None:intergenic | 35.0% | |
| CTCCACCTTCTTAATAGATT+CGG | + | chr4.1:27136129-27136148 | None:intergenic | 35.0% | |
| GAAAACTGAAGAAGAGAATG+CGG | - | chr4.1:27135854-27135873 | MS.gene065908:intron | 35.0% | |
| GATATTATGAAGCACGGATA+CGG | - | chr4.1:27133985-27134004 | MS.gene065908:CDS | 35.0% | |
| GCATGAAAATGGTGATCTTT+CGG | - | chr4.1:27136196-27136215 | MS.gene065908:intron | 35.0% | |
| GGAAACCGAATCTATTAAGA+AGG | - | chr4.1:27136121-27136140 | MS.gene065908:CDS | 35.0% | |
| GGAAGAATCAAATGCCAATA+GGG | - | chr4.1:27135926-27135945 | MS.gene065908:intron | 35.0% | |
| GGAGTGGAAAAAGAAAGTTA+AGG | - | chr4.1:27135137-27135156 | MS.gene065908:intron | 35.0% | |
| GGTTGAAGAATCAAACAAGT+TGG | - | chr4.1:27135173-27135192 | MS.gene065908:intron | 35.0% | |
| TATCGAATCGAGATATGACT+CGG | + | chr4.1:27133761-27133780 | None:intergenic | 35.0% | |
| TCAGTTGAAGGAAAATCTGA+AGG | - | chr4.1:27135959-27135978 | MS.gene065908:CDS | 35.0% | |
| TGGCTTCAAAATCAAGTACT+AGG | - | chr4.1:27132572-27132591 | MS.gene065908:CDS | 35.0% | |
| TTCAGTAGACTTGAGATGTT+AGG | + | chr4.1:27133530-27133549 | None:intergenic | 35.0% | |
| TTCTTGTGTTGAATCTAGCA+AGG | + | chr4.1:27134932-27134951 | None:intergenic | 35.0% | |
| ! | AAAAAGAGCTTGAAAGTGTG+AGG | - | chr4.1:27134716-27134735 | MS.gene065908:CDS | 35.0% |
| ! | AGTACTAGGTTAGTCAAGTT+TGG | - | chr4.1:27132586-27132605 | MS.gene065908:CDS | 35.0% |
| ! | CCATTCATTTTCACAGGTTT+AGG | + | chr4.1:27136407-27136426 | None:intergenic | 35.0% |
| ! | GAAAGACGTGAATTTTGCAA+CGG | + | chr4.1:27133288-27133307 | None:intergenic | 35.0% |
| ! | GGTTTTCCATTCATTTTCAC+AGG | + | chr4.1:27136413-27136432 | None:intergenic | 35.0% |
| ! | GTCTACTGAAAAGTGTGATA+AGG | - | chr4.1:27133540-27133559 | MS.gene065908:CDS | 35.0% |
| ! | TTTGAGTTCTTCCTGATTGA+GGG | + | chr4.1:27136324-27136343 | None:intergenic | 35.0% |
| !! | TTTTCTGAAGAGAATGGTCA+TGG | - | chr4.1:27136260-27136279 | MS.gene065908:intron | 35.0% |
| !!! | TTACTTACTTTTGGTGTTGC+CGG | + | chr4.1:27133222-27133241 | None:intergenic | 35.0% |
| ACTGAGTCAAAGACAGAAGA+AGG | - | chr4.1:27136572-27136591 | MS.gene065908:intron | 40.0% | |
| ACTTCCAGAGGCTAAATCAT+TGG | - | chr4.1:27136541-27136560 | MS.gene065908:intron | 40.0% | |
| AGAACTTGAAACCTCAAGGA+CGG | - | chr4.1:27135086-27135105 | MS.gene065908:intron | 40.0% | |
| AGAGGCTAAATCATTGGAAG+AGG | - | chr4.1:27136547-27136566 | MS.gene065908:intron | 40.0% | |
| AGCTGAATTGACACAGTTGA+AGG | - | chr4.1:27134906-27134925 | MS.gene065908:intron | 40.0% | |
| AGCTGCTACTCTTAAAGAGA+AGG | - | chr4.1:27135278-27135297 | MS.gene065908:intron | 40.0% | |
| AGGAAGATGAGAGCAAAGAA+AGG | - | chr4.1:27136435-27136454 | MS.gene065908:intron | 40.0% | |
| AGGGAATGAGTTATGATGAG+AGG | - | chr4.1:27135025-27135044 | MS.gene065908:intron | 40.0% | |
| CATCAGCATGATTTAATGCC+TGG | + | chr4.1:27134837-27134856 | None:intergenic | 40.0% | |
| CGAATCTATTAAGAAGGTGG+AGG | - | chr4.1:27136127-27136146 | MS.gene065908:CDS | 40.0% | |
| CTCAAGAAAGAACTCGACAA+GGG | - | chr4.1:27135006-27135025 | MS.gene065908:intron | 40.0% | |
| CTGCTTCATTACAGATTCCA+AGG | + | chr4.1:27135217-27135236 | None:intergenic | 40.0% | |
| CTTCCTTAGCCATAAGAAGA+CGG | + | chr4.1:27135362-27135381 | None:intergenic | 40.0% | |
| GAACCATTCTAACGAATCTC+TGG | - | chr4.1:27133861-27133880 | MS.gene065908:CDS | 40.0% | |
| GAAGAGAATGGTCATGGATA+TGG | - | chr4.1:27136266-27136285 | MS.gene065908:intron | 40.0% | |
| GAATGTGTTTGAGAACTCGA+AGG | - | chr4.1:27135788-27135807 | MS.gene065908:intron | 40.0% | |
| GACAGCAAAAAAGAAGTGGT+TGG | + | chr4.1:27133902-27133921 | None:intergenic | 40.0% | |
| GAGTTGCACGATTGAGAAAA+AGG | - | chr4.1:27136493-27136512 | MS.gene065908:intron | 40.0% | |
| GCAAAATTCACGTCTTTCTG+TGG | - | chr4.1:27133290-27133309 | MS.gene065908:CDS | 40.0% | |
| GCTACTCTTAAAGAGAAGGT+GGG | - | chr4.1:27135282-27135301 | MS.gene065908:intron | 40.0% | |
| GGAAGATGAGAGCAAAGAAA+GGG | - | chr4.1:27136436-27136455 | MS.gene065908:intron | 40.0% | |
| GTTCTTAGCATCACACATCA+TGG | + | chr4.1:27134815-27134834 | None:intergenic | 40.0% | |
| TACTTTCTCAGCATGAACCT+CGG | + | chr4.1:27134875-27134894 | None:intergenic | 40.0% | |
| TAGCCAGAGATTCGTTAGAA+TGG | + | chr4.1:27133867-27133886 | None:intergenic | 40.0% | |
| TCTAAGCAACCAAGCTGAAA+GGG | - | chr4.1:27135638-27135657 | MS.gene065908:intron | 40.0% | |
| TCTCAAGAAAGAACTCGACA+AGG | - | chr4.1:27135005-27135024 | MS.gene065908:intron | 40.0% | |
| TCTTCCAATGATTTAGCCTC+TGG | + | chr4.1:27136548-27136567 | None:intergenic | 40.0% | |
| TCTTTGCTCTCATCTTCCTT+TGG | + | chr4.1:27136434-27136453 | None:intergenic | 40.0% | |
| TGCTACTCTTAAAGAGAAGG+TGG | - | chr4.1:27135281-27135300 | MS.gene065908:intron | 40.0% | |
| TTATGCAAACAGTCTGCTTG+AGG | - | chr4.1:27135116-27135135 | MS.gene065908:intron | 40.0% | |
| TTCATGCTCAGTGTGATTTC+TGG | + | chr4.1:27136183-27136202 | None:intergenic | 40.0% | |
| TTCCTTAACTGCCTCAAGTT+CGG | + | chr4.1:27135424-27135443 | None:intergenic | 40.0% | |
| TTCTAAGCAACCAAGCTGAA+AGG | - | chr4.1:27135637-27135656 | MS.gene065908:intron | 40.0% | |
| TTGAACTCGAGATGAGATTC+AGG | + | chr4.1:27133833-27133852 | None:intergenic | 40.0% | |
| ! | GACACTTCTCTTTTGCCATT+TGG | - | chr4.1:27133937-27133956 | MS.gene065908:CDS | 40.0% |
| ! | GTTGAAAGAAGCACAAAGAG+TGG | - | chr4.1:27134552-27134571 | MS.gene065908:CDS | 40.0% |
| ! | GTTTGAGTTCTTCCTGATTG+AGG | + | chr4.1:27136325-27136344 | None:intergenic | 40.0% |
| ! | TGGTGCTTTGTTGGAATTGT+CGG | + | chr4.1:27133199-27133218 | None:intergenic | 40.0% |
| !! | AGCTCGGAATTTTTCGATCT+CGG | + | chr4.1:27134641-27134660 | None:intergenic | 40.0% |
| !! | GCTGTTGTTTCCAATGATTC+TGG | - | chr4.1:27133009-27133028 | MS.gene065908:CDS | 40.0% |
| AAAACGATGAACTCCGAGCT+AGG | - | chr4.1:27136099-27136118 | MS.gene065908:CDS | 45.0% | |
| AAACGATGAACTCCGAGCTA+GGG | - | chr4.1:27136100-27136119 | MS.gene065908:CDS | 45.0% | |
| AAGACAGAAGAAGGTGGTGA+TGG | - | chr4.1:27136581-27136600 | MS.gene065908:intron | 45.0% | |
| ACGCCGACACAGCTAATAAT+TGG | - | chr4.1:27134040-27134059 | MS.gene065908:CDS | 45.0% | |
| AGGGAAAGCTCAACAACCTT+TGG | + | chr4.1:27136305-27136324 | None:intergenic | 45.0% | |
| AGTCAATGCTTGATGAAGCG+CGG | - | chr4.1:27135724-27135743 | MS.gene065908:intron | 45.0% | |
| ATAAGATTCAGCCGTCCTTG+AGG | + | chr4.1:27135100-27135119 | None:intergenic | 45.0% | |
| ATCCGAACTTGAGGCAGTTA+AGG | - | chr4.1:27135419-27135438 | MS.gene065908:intron | 45.0% | |
| ATTCAAAGCCAGCTGTTGAG+CGG | - | chr4.1:27133334-27133353 | MS.gene065908:CDS | 45.0% | |
| CATAGCTTTCCCTTTCAGCT+TGG | + | chr4.1:27135650-27135669 | None:intergenic | 45.0% | |
| CCTGTTCCAATTCAACAGCT+CGG | + | chr4.1:27134657-27134676 | None:intergenic | 45.0% | |
| GAGAATGGTCATGGATATGG+AGG | - | chr4.1:27136269-27136288 | MS.gene065908:intron | 45.0% | |
| GAGACAAAAAGCCGATCTTG+AGG | - | chr4.1:27135326-27135345 | MS.gene065908:intron | 45.0% | |
| GAGATCTGCATCAGAATCCT+TGG | - | chr4.1:27135197-27135216 | MS.gene065908:intron | 45.0% | |
| GAGCTTCTCATTTGCTTCCT+CGG | + | chr4.1:27134578-27134597 | None:intergenic | 45.0% | |
| GAGTCAAAGACAGAAGAAGG+TGG | - | chr4.1:27136575-27136594 | MS.gene065908:intron | 45.0% | |
| GATGTGTGATGCTAAGAACC+AGG | - | chr4.1:27134816-27134835 | MS.gene065908:CDS | 45.0% | |
| GGAGGAGTTGTCAAAGTTAC+TGG | - | chr4.1:27136145-27136164 | MS.gene065908:intron | 45.0% | |
| GTCTGAGAACGTGAAACTGA+AGG | - | chr4.1:27136031-27136050 | MS.gene065908:CDS | 45.0% | |
| TAAGGCAGGAACATCTTCAG+CGG | + | chr4.1:27133713-27133732 | None:intergenic | 45.0% | |
| TAATAGGGTCTGCACATGAG+AGG | + | chr4.1:27135484-27135503 | None:intergenic | 45.0% | |
| TGATCTTTCGGACAGCGAAA+AGG | - | chr4.1:27136208-27136227 | MS.gene065908:intron | 45.0% | |
| TGGAGGAGAGGAAATTCCAA+AGG | - | chr4.1:27136286-27136305 | MS.gene065908:intron | 45.0% | |
| TGTTGAGCTTTCCCTCAATC+AGG | - | chr4.1:27136310-27136329 | MS.gene065908:intron | 45.0% | |
| TTCAGAACGCCGTCTTCTTA+TGG | - | chr4.1:27135350-27135369 | MS.gene065908:intron | 45.0% | |
| TTCCTGCAGATGTATAGCCT+CGG | + | chr4.1:27135994-27136013 | None:intergenic | 45.0% | |
| ! | ACATCTGCAGGAAGCTCTAA+AGG | - | chr4.1:27136001-27136020 | MS.gene065908:CDS | 45.0% |
| ! | AGCTTGCTCAAGAAGAAAGG+TGG | - | chr4.1:27136734-27136753 | MS.gene065908:intron | 45.0% |
| ! | CAATTCCAACAAAGCACCAC+CGG | - | chr4.1:27133200-27133219 | MS.gene065908:CDS | 45.0% |
| ! | CGTGAATTTTGCAACGGAGA+TGG | + | chr4.1:27133282-27133301 | None:intergenic | 45.0% |
| ! | GCGTTCTGAATCCTCAAGAT+CGG | + | chr4.1:27135340-27135359 | None:intergenic | 45.0% |
| ! | GCTTTGTTGGAATTGTCGGA+TGG | + | chr4.1:27133195-27133214 | None:intergenic | 45.0% |
| ! | GGAAACATCTGAGATGTGCA+AGG | - | chr4.1:27133561-27133580 | MS.gene065908:CDS | 45.0% |
| ! | GGAAGCTTGCTCAAGAAGAA+AGG | - | chr4.1:27136731-27136750 | MS.gene065908:intron | 45.0% |
| ! | TAGATTCGGTTTCCCTAGCT+CGG | + | chr4.1:27136115-27136134 | None:intergenic | 45.0% |
| !! | GGCTTTGAATTCACAGATCG+TGG | + | chr4.1:27133324-27133343 | None:intergenic | 45.0% |
| !! | TCAGATGCTGATTTGGTCAC+TGG | + | chr4.1:27133255-27133274 | None:intergenic | 45.0% |
| ACAAGCTCCAAGAGCTGCAA+AGG | - | chr4.1:27134426-27134445 | MS.gene065908:CDS | 50.0% | |
| ACCAGAGAGAGAACTTCCAG+AGG | - | chr4.1:27136529-27136548 | MS.gene065908:intron | 50.0% | |
| ACGCCGTCTTCTTATGGCTA+AGG | - | chr4.1:27135356-27135375 | MS.gene065908:intron | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | chr4.1:27133991-27134010 | MS.gene065908:CDS | 50.0% | |
| ATTGCTTACATCAGGTGGGG+TGG | + | chr4.1:27133379-27133398 | None:intergenic | 50.0% | |
| CAAACAGTCTGCTTGAGGAG+TGG | - | chr4.1:27135121-27135140 | MS.gene065908:intron | 50.0% | |
| CAAGCTCCAAGAGCTGCAAA+GGG | - | chr4.1:27134427-27134446 | MS.gene065908:CDS | 50.0% | |
| CCGAGCTGTTGAATTGGAAC+AGG | - | chr4.1:27134654-27134673 | MS.gene065908:CDS | 50.0% | |
| CCTTCAAGCTGAGAAGGAGA+AGG | - | chr4.1:27134513-27134532 | MS.gene065908:CDS | 50.0% | |
| CCTTCTCCTTCTCAGCTTGA+AGG | + | chr4.1:27134516-27134535 | None:intergenic | 50.0% | |
| CGACTCTTGATTGGGAAAGC+AGG | - | chr4.1:27134278-27134297 | MS.gene065908:CDS | 50.0% | |
| CTGAGCTTCTTCGTCCCTAT+TGG | + | chr4.1:27135943-27135962 | None:intergenic | 50.0% | |
| GCAGATCCTTCAAGCTGAGA+AGG | - | chr4.1:27134507-27134526 | MS.gene065908:CDS | 50.0% | |
| GCTGTTGAATTGGAACAGGC+TGG | - | chr4.1:27134658-27134677 | MS.gene065908:CDS | 50.0% | |
| GGAAGCAAATGAGAAGCTCC+AGG | - | chr4.1:27134579-27134598 | MS.gene065908:CDS | 50.0% | |
| GGACGAAGAAGCTCAGTTGA+AGG | - | chr4.1:27135947-27135966 | MS.gene065908:intron | 50.0% | |
| GGCTCAAAAGCAGGCTAAAG+AGG | - | chr4.1:27134612-27134631 | MS.gene065908:CDS | 50.0% | |
| GGCTCTTGAATCCGAACTTG+AGG | - | chr4.1:27135410-27135429 | MS.gene065908:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr4.1:27134155-27134174 | None:intergenic | 50.0% | |
| TCTGAACCCTTTGCAGCTCT+TGG | + | chr4.1:27134436-27134455 | None:intergenic | 50.0% | |
| TCTGAAGGAAGTTGAGACCG+AGG | - | chr4.1:27135974-27135993 | MS.gene065908:CDS | 50.0% | |
| TGAGAACTCGAAGGCTGAGT+GGG | - | chr4.1:27135797-27135816 | MS.gene065908:intron | 50.0% | |
| TGATGCAGCTAAAGTTGCCG+AGG | - | chr4.1:27134855-27134874 | MS.gene065908:CDS | 50.0% | |
| TGGTCATGGATATGGAGGAG+AGG | - | chr4.1:27136274-27136293 | MS.gene065908:intron | 50.0% | |
| TTGAGAACTCGAAGGCTGAG+TGG | - | chr4.1:27135796-27135815 | MS.gene065908:intron | 50.0% | |
| ! | TGGCGACTCAGATGCTGATT+TGG | + | chr4.1:27133262-27133281 | None:intergenic | 50.0% |
| !! | AGCATTGGTGGCTCAAAAGC+AGG | - | chr4.1:27134603-27134622 | MS.gene065908:CDS | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr4.1:27134088-27134107 | MS.gene065908:CDS | 50.0% |
| !!! | CTTACTTTTGGTGTTGCCGG+TGG | + | chr4.1:27133219-27133238 | None:intergenic | 50.0% |
| AACCACTGAGGAGCTTGAGC+GGG | - | chr4.1:27134774-27134793 | MS.gene065908:CDS | 55.0% | |
| CAACCACTGAGGAGCTTGAG+CGG | - | chr4.1:27134773-27134792 | MS.gene065908:CDS | 55.0% | |
| CACTCTTGCCTCAACCACTG+AGG | - | chr4.1:27134762-27134781 | MS.gene065908:CDS | 55.0% | |
| CTCAAGCTCCTCAGTGGTTG+AGG | + | chr4.1:27134773-27134792 | None:intergenic | 55.0% | |
| CTCAGTGGTTGAGGCAAGAG+TGG | + | chr4.1:27134764-27134783 | None:intergenic | 55.0% | |
| GAACCAGCATGCCTTGGATG+TGG | - | chr4.1:27134738-27134757 | MS.gene065908:CDS | 55.0% | |
| GACCGAGGCTATACATCTGC+AGG | - | chr4.1:27135989-27136008 | MS.gene065908:CDS | 55.0% | |
| TGAAGAAGAGAATGCGGCCG+CGG | - | chr4.1:27135860-27135879 | MS.gene065908:intron | 55.0% | |
| TGAGAAGCTCCAGGCAGCAT+TGG | - | chr4.1:27134588-27134607 | MS.gene065908:CDS | 55.0% | |
| TGTGAGGAACCAGCATGCCT+TGG | - | chr4.1:27134732-27134751 | MS.gene065908:CDS | 55.0% | |
| TGTTGCCGGTGGTGCTTTGT+TGG | + | chr4.1:27133208-27133227 | None:intergenic | 55.0% | |
| TTTGAGCCACCAATGCTGCC+TGG | + | chr4.1:27134600-27134619 | None:intergenic | 55.0% | |
| ! | AGAAGCACAAAGAGTGGCCG+AGG | - | chr4.1:27134558-27134577 | MS.gene065908:CDS | 55.0% |
| ! | GCCTCTGGAAGTTCTCTCTC+TGG | + | chr4.1:27136533-27136552 | None:intergenic | 55.0% |
| ! | GCTGATTTCCGCTCAACAGC+TGG | + | chr4.1:27133345-27133364 | None:intergenic | 55.0% |
| AACCCGCTCAAGCTCCTCAG+TGG | + | chr4.1:27134779-27134798 | None:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | - | chr4.1:27134117-27134136 | MS.gene065908:CDS | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | - | chr4.1:27133998-27134017 | MS.gene065908:CDS | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr4.1:27134133-27134152 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr4.1:27134149-27134168 | None:intergenic | 60.0% | |
| GCTTACATCAGGTGGGGTGG+CGG | + | chr4.1:27133376-27133395 | None:intergenic | 60.0% | |
| GGCAAGAGTGGCCACATCCA+AGG | + | chr4.1:27134752-27134771 | None:intergenic | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr4.1:27134020-27134039 | None:intergenic | 60.0% | |
| TGGCCACATCCAAGGCATGC+TGG | + | chr4.1:27134744-27134763 | None:intergenic | 60.0% | |
| ! | GAAGCTCCAGGCAGCATTGG+TGG | - | chr4.1:27134591-27134610 | MS.gene065908:CDS | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr4.1:27134139-27134158 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | - | chr4.1:27134094-27134113 | MS.gene065908:CDS | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr4.1:27134135-27134154 | MS.gene065908:CDS | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | - | chr4.1:27134118-27134137 | MS.gene065908:CDS | 65.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr4.1:27134009-27134028 | MS.gene065908:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 27132571 | 27136772 | 27132571 | ID=MS.gene065908 |
| chr4.1 | mRNA | 27132571 | 27136772 | 27132571 | ID=MS.gene065908.t1;Parent=MS.gene065908 |
| chr4.1 | exon | 27136750 | 27136772 | 27136750 | ID=MS.gene065908.t1.exon1;Parent=MS.gene065908.t1 |
| chr4.1 | CDS | 27136750 | 27136772 | 27136750 | ID=cds.MS.gene065908.t1;Parent=MS.gene065908.t1 |
| chr4.1 | exon | 27135954 | 27136158 | 27135954 | ID=MS.gene065908.t1.exon2;Parent=MS.gene065908.t1 |
| chr4.1 | CDS | 27135954 | 27136158 | 27135954 | ID=cds.MS.gene065908.t1;Parent=MS.gene065908.t1 |
| chr4.1 | exon | 27132571 | 27134919 | 27132571 | ID=MS.gene065908.t1.exon3;Parent=MS.gene065908.t1 |
| chr4.1 | CDS | 27132571 | 27134919 | 27132571 | ID=cds.MS.gene065908.t1;Parent=MS.gene065908.t1 |
| Gene Sequence |
| Protein sequence |
