Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067567.t1 | XP_003607875.1 | 99 | 518 | 5 | 0 | 1 | 518 | 1 | 518 | 3.30E-293 | 1016.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067567.t1 | Q9S735 | 64.1 | 515 | 168 | 7 | 5 | 507 | 4 | 513 | 2.8e-184 | 646.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067567.t1 | A2Q296 | 99.0 | 518 | 5 | 0 | 1 | 518 | 1 | 518 | 2.4e-293 | 1016.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050149 | MS.gene067567 | 0.803327 | 3.68E-49 | -1.69E-46 |
| MS.gene059428 | MS.gene067567 | 0.881469 | 2.34E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067567 | MS.gene23490 | PPI |
| MS.gene067567 | MS.gene020517 | PPI |
| MS.gene067567 | MS.gene052675 | PPI |
| MS.gene067063 | MS.gene067567 | PPI |
| MS.gene62686 | MS.gene067567 | PPI |
| MS.gene067567 | MS.gene052677 | PPI |
| MS.gene067567 | MS.gene25185 | PPI |
| MS.gene020365 | MS.gene067567 | PPI |
| MS.gene015655 | MS.gene067567 | PPI |
| MS.gene067567 | MS.gene97006 | PPI |
| MS.gene56432 | MS.gene067567 | PPI |
| MS.gene067567 | MS.gene98973 | PPI |
| MS.gene23489 | MS.gene067567 | PPI |
| MS.gene067567 | MS.gene020364 | PPI |
| MS.gene067567 | MS.gene018707 | PPI |
| MS.gene006892 | MS.gene067567 | PPI |
| MS.gene067567 | MS.gene83067 | PPI |
| MS.gene067567 | MS.gene026529 | PPI |
| MS.gene067567 | MS.gene97007 | PPI |
| MS.gene059428 | MS.gene067567 | PPI |
| MS.gene052674 | MS.gene067567 | PPI |
| MS.gene067567 | MS.gene018708 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067567.t1 | MTR_4g083960 | 99.035 | 518 | 5 | 0 | 1 | 518 | 1 | 518 | 0.0 | 1061 |
| MS.gene067567.t1 | MTR_1g074930 | 54.887 | 532 | 216 | 10 | 1 | 513 | 1 | 527 | 0.0 | 545 |
| MS.gene067567.t1 | MTR_1g043200 | 54.253 | 529 | 222 | 9 | 1 | 514 | 1 | 524 | 0.0 | 537 |
| MS.gene067567.t1 | MTR_1g043290 | 54.221 | 533 | 220 | 10 | 1 | 514 | 1 | 528 | 0.0 | 537 |
| MS.gene067567.t1 | MTR_1g043220 | 54.034 | 533 | 221 | 10 | 1 | 514 | 1 | 528 | 0.0 | 537 |
| MS.gene067567.t1 | MTR_3g082700 | 55.233 | 516 | 211 | 10 | 1 | 501 | 1 | 511 | 0.0 | 535 |
| MS.gene067567.t1 | MTR_1g069935 | 52.571 | 525 | 217 | 10 | 3 | 508 | 4 | 515 | 0.0 | 528 |
| MS.gene067567.t1 | MTR_7g096870 | 52.345 | 533 | 222 | 11 | 5 | 518 | 6 | 525 | 0.0 | 519 |
| MS.gene067567.t1 | MTR_7g096880 | 51.769 | 537 | 213 | 12 | 5 | 510 | 6 | 527 | 1.34e-177 | 510 |
| MS.gene067567.t1 | MTR_1g074940 | 52.745 | 510 | 213 | 10 | 5 | 501 | 6 | 500 | 1.17e-176 | 507 |
| MS.gene067567.t1 | MTR_1g069930 | 50.662 | 529 | 225 | 12 | 1 | 507 | 1 | 515 | 5.15e-172 | 496 |
| MS.gene067567.t1 | MTR_1g028600 | 49.615 | 520 | 238 | 11 | 4 | 513 | 2 | 507 | 1.92e-163 | 474 |
| MS.gene067567.t1 | MTR_5g068140 | 47.905 | 549 | 236 | 13 | 1 | 514 | 1 | 534 | 4.34e-157 | 459 |
| MS.gene067567.t1 | MTR_6g088450 | 24.951 | 513 | 306 | 17 | 12 | 500 | 45 | 502 | 6.25e-20 | 93.2 |
| MS.gene067567.t1 | MTR_3g084110 | 24.236 | 491 | 303 | 17 | 27 | 503 | 35 | 470 | 1.71e-18 | 88.6 |
| MS.gene067567.t1 | MTR_7g005910 | 22.088 | 498 | 310 | 17 | 26 | 505 | 39 | 476 | 6.63e-14 | 74.3 |
| MS.gene067567.t1 | MTR_1g116650 | 22.222 | 378 | 244 | 13 | 132 | 505 | 178 | 509 | 1.72e-12 | 70.1 |
| MS.gene067567.t1 | MTR_4g072030 | 21.503 | 479 | 288 | 15 | 61 | 505 | 60 | 484 | 3.41e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067567.t1 | AT1G76430 | 64.078 | 515 | 168 | 7 | 5 | 507 | 4 | 513 | 0.0 | 676 |
| MS.gene067567.t1 | AT1G20860 | 63.410 | 522 | 175 | 7 | 5 | 517 | 55 | 569 | 0.0 | 666 |
| MS.gene067567.t1 | AT1G20860 | 63.410 | 522 | 175 | 7 | 5 | 517 | 3 | 517 | 0.0 | 665 |
| MS.gene067567.t1 | AT5G43350 | 54.302 | 523 | 215 | 11 | 5 | 510 | 6 | 521 | 0.0 | 540 |
| MS.gene067567.t1 | AT5G43360 | 54.247 | 518 | 215 | 11 | 5 | 507 | 6 | 516 | 0.0 | 535 |
| MS.gene067567.t1 | AT2G38940 | 54.038 | 520 | 215 | 13 | 1 | 503 | 1 | 513 | 0.0 | 525 |
| MS.gene067567.t1 | AT3G54700 | 53.640 | 522 | 221 | 11 | 5 | 513 | 6 | 519 | 0.0 | 524 |
| MS.gene067567.t1 | AT3G54700 | 53.640 | 522 | 221 | 11 | 5 | 513 | 6 | 519 | 0.0 | 524 |
| MS.gene067567.t1 | AT5G43370 | 54.183 | 526 | 217 | 11 | 5 | 513 | 6 | 524 | 1.98e-179 | 514 |
| MS.gene067567.t1 | AT5G43370 | 54.183 | 526 | 217 | 11 | 5 | 513 | 6 | 524 | 1.98e-179 | 514 |
| MS.gene067567.t1 | AT2G32830 | 52.190 | 525 | 225 | 11 | 3 | 508 | 4 | 521 | 2.59e-178 | 513 |
| MS.gene067567.t1 | AT5G43340 | 51.758 | 512 | 222 | 10 | 6 | 507 | 8 | 504 | 3.15e-171 | 493 |
| MS.gene067567.t1 | AT4G08878 | 54.701 | 234 | 90 | 5 | 30 | 252 | 13 | 241 | 2.63e-72 | 231 |
| MS.gene067567.t1 | AT4G08895 | 42.647 | 136 | 43 | 3 | 318 | 453 | 30 | 130 | 5.42e-27 | 107 |
| MS.gene067567.t1 | AT2G43330 | 22.335 | 394 | 252 | 11 | 132 | 512 | 131 | 483 | 1.16e-14 | 77.0 |
| MS.gene067567.t1 | AT3G18830 | 23.774 | 530 | 302 | 21 | 15 | 506 | 31 | 496 | 6.54e-12 | 68.6 |
Find 136 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCTTCTTTGCAAATTT+TGG | 0.012899 | 4.1:+24121324 | MS.gene067567:CDS |
| TCAACATGTCATGGTATTTC+TGG | 0.184785 | 4.1:+24121402 | MS.gene067567:CDS |
| ATGGATTCTCTTCGGTTATT+TGG | 0.195842 | 4.1:-24120885 | None:intergenic |
| GGTTTCTTCAGATTCTTCTT+AGG | 0.198704 | 4.1:+24118695 | MS.gene067567:CDS |
| AGAAACTACCTGGCAGTTTC+TGG | 0.216451 | 4.1:-24118998 | None:intergenic |
| TGTCTGAGTTTGCTAATAAA+AGG | 0.237042 | 4.1:+24118759 | MS.gene067567:CDS |
| TTTGGTCCAATGAGAGTAAT+AGG | 0.245047 | 4.1:-24121256 | None:intergenic |
| TATGCAAGGGTTTGGTATAT+TGG | 0.253824 | 4.1:+24118814 | MS.gene067567:CDS |
| TTGGATCTGTAGGATTTCTT+TGG | 0.269360 | 4.1:+24121451 | MS.gene067567:CDS |
| CAGCTGCATTGACTTATTAT+TGG | 0.282392 | 4.1:+24118963 | MS.gene067567:CDS |
| TTCAGATTCTTCTTAGGGCT+TGG | 0.291000 | 4.1:+24118701 | MS.gene067567:CDS |
| GCTGTTTGCTCTACCATTCC+CGG | 0.304136 | 4.1:+24121132 | MS.gene067567:CDS |
| TGGATCTGTAGGATTTCTTT+GGG | 0.330065 | 4.1:+24121452 | MS.gene067567:CDS |
| GGCTAGTGCAACTGTTACTA+TGG | 0.333298 | 4.1:+24118835 | MS.gene067567:CDS |
| GGAAACCATGGGAAGATCTT+TGG | 0.341697 | 4.1:+24121590 | MS.gene067567:CDS |
| GGTTGACTTGACGAATTTCT+TGG | 0.342709 | 4.1:-24118478 | None:intergenic |
| GTTTCTTCAGATTCTTCTTA+GGG | 0.347829 | 4.1:+24118696 | MS.gene067567:CDS |
| GCATTTGTGGTTGGTGGTAA+TGG | 0.351217 | 4.1:-24120904 | None:intergenic |
| AACTCTTTCCAGCTAGGTTC+AGG | 0.354273 | 4.1:+24121379 | MS.gene067567:CDS |
| GCTTGTTAGCATCAATAATA+AGG | 0.362995 | 4.1:-24118612 | None:intergenic |
| TCTGGGGCTGTTGGTAAGGT+TGG | 0.368628 | 4.1:+24121420 | MS.gene067567:CDS |
| GGACGCCTCGGAGACCTAAA+AGG | 0.373921 | 4.1:+24118566 | MS.gene067567:CDS |
| GGTTTCCCTATTACTCTCAT+TGG | 0.377430 | 4.1:+24121250 | MS.gene067567:CDS |
| GACATAATGGTAGAAGATAA+AGG | 0.378353 | 4.1:-24118740 | None:intergenic |
| TTCTTCTTAGGGCTTGGAAT+TGG | 0.378577 | 4.1:+24118707 | MS.gene067567:CDS |
| TTCTTAGGGCTTGGAATTGG+TGG | 0.382861 | 4.1:+24118710 | MS.gene067567:CDS |
| ATTAGCAAACTCAGACATAA+TGG | 0.389302 | 4.1:-24118753 | None:intergenic |
| ACAATAAAGGTGGTAGTGTT+AGG | 0.397982 | 4.1:-24121348 | None:intergenic |
| TCATGATAACAAAGGGTTCA+TGG | 0.404520 | 4.1:+24121287 | MS.gene067567:CDS |
| CTAACAAGCTCTCTAGCTTC+TGG | 0.406505 | 4.1:+24118626 | MS.gene067567:CDS |
| CAACATGTCATGGTATTTCT+GGG | 0.410467 | 4.1:+24121403 | MS.gene067567:CDS |
| AGATCTTCCCATGGTTTCCT+TGG | 0.413802 | 4.1:-24121586 | None:intergenic |
| AAAGGGTTCATGGTTATCTA+TGG | 0.427006 | 4.1:+24121297 | MS.gene067567:CDS |
| TGTTACTATGGTGGTTTGCT+TGG | 0.428921 | 4.1:+24118847 | MS.gene067567:CDS |
| GGTAAGGTTGGTGCAATCAT+TGG | 0.429582 | 4.1:+24121432 | MS.gene067567:CDS |
| GGTCTCCGAGGCGTCCGAAT+AGG | 0.438994 | 4.1:-24118559 | None:intergenic |
| TATTTCTGGGGCTGTTGGTA+AGG | 0.444891 | 4.1:+24121416 | MS.gene067567:CDS |
| AAGAGTTAAAATCCAAATGA+TGG | 0.452565 | 4.1:+24121191 | MS.gene067567:CDS |
| GCCTTCGGTCAGCTCCTATT+CGG | 0.459127 | 4.1:+24118545 | MS.gene067567:CDS |
| CGCCGGAGGCTGACGTTGCA+TGG | 0.463769 | 4.1:+24118912 | MS.gene067567:CDS |
| AACACAATACTACCATTTCA+AGG | 0.465634 | 4.1:+24118355 | MS.gene067567:CDS |
| TGGTGGTAATGGATTCTCTT+CGG | 0.465888 | 4.1:-24120893 | None:intergenic |
| CAGCTGAACTCTTTCCAGCT+AGG | 0.466833 | 4.1:+24121373 | MS.gene067567:CDS |
| GCTTTCATTCCAATCCCCTT+AGG | 0.467608 | 4.1:-24121504 | None:intergenic |
| CTCCATGCAACGTCAGCCTC+CGG | 0.468310 | 4.1:-24118914 | None:intergenic |
| GAGTTCAGCTGGGACAATAA+AGG | 0.470332 | 4.1:-24121361 | None:intergenic |
| ATCGTTTGTATATTTCACTT+TGG | 0.472004 | 4.1:-24121038 | None:intergenic |
| CTTGGAGGGGTGTGCATAGT+GGG | 0.472095 | 4.1:+24121540 | MS.gene067567:CDS |
| AAGAATTCTCTTGAAAGAAG+AGG | 0.472184 | 4.1:-24120934 | None:intergenic |
| CTTGTCTCCGTTGCACTCCT+AGG | 0.476567 | 4.1:+24118518 | MS.gene067567:CDS |
| GAAAATGGCAAGAGGATTGA+AGG | 0.478791 | 4.1:+24118307 | None:intergenic |
| GCTGACCGAAGGCGGTTCCT+AGG | 0.479516 | 4.1:-24118535 | None:intergenic |
| CATGTTGACCTGAACCTAGC+TGG | 0.479877 | 4.1:-24121387 | None:intergenic |
| CTAGCTGGAAAGAGTTCAGC+TGG | 0.480788 | 4.1:-24121372 | None:intergenic |
| AAAGCCTCACTTATCATACT+TGG | 0.482489 | 4.1:+24121522 | MS.gene067567:CDS |
| GGTAGAGCAAACAGCAAGAA+TGG | 0.483548 | 4.1:-24121124 | None:intergenic |
| CTATGATGATGGCCTTGAAA+TGG | 0.485108 | 4.1:-24118367 | None:intergenic |
| TTTCACTTTGGAATAGAACT+TGG | 0.486743 | 4.1:-24121026 | None:intergenic |
| AAGAGGGTAGGCAGCATTTG+TGG | 0.490158 | 4.1:-24120917 | None:intergenic |
| CATTAGGTATACAGCATTAG+TGG | 0.491216 | 4.1:+24120804 | MS.gene067567:intron |
| TGGAGGTTGATATTGATGAT+TGG | 0.491970 | 4.1:+24118932 | MS.gene067567:CDS |
| GAAGGAGGAAGGATATCCTA+AGG | 0.492281 | 4.1:+24121488 | MS.gene067567:CDS |
| GAGAAAATCATGATAACAAA+GGG | 0.493974 | 4.1:+24121280 | MS.gene067567:CDS |
| TTGCAAGATGGAAAGCCTCT+TGG | 0.498386 | 4.1:-24121092 | None:intergenic |
| GGCACATCAAAAGCCGTCTC+CGG | 0.505349 | 4.1:-24118890 | None:intergenic |
| ATTTCGCAGCGGTTCGAAGC+CGG | 0.506942 | 4.1:+24118871 | MS.gene067567:CDS |
| GCACTCCTAGGAACCGCCTT+CGG | 0.509045 | 4.1:+24118530 | MS.gene067567:CDS |
| GCCTCACTTATCATACTTGG+AGG | 0.509162 | 4.1:+24121525 | MS.gene067567:CDS |
| TTGACGAATTTCTTGGTGGT+CGG | 0.510171 | 4.1:-24118471 | None:intergenic |
| CAGCGGTTCGAAGCCGGAGA+CGG | 0.512536 | 4.1:+24118877 | MS.gene067567:CDS |
| TGGCTTGGATTCTTGCAAGA+TGG | 0.513731 | 4.1:-24121104 | None:intergenic |
| AGCTCTCTTTGTTGTACAGA+TGG | 0.516588 | 4.1:-24118654 | None:intergenic |
| TTGGTCCAATGAGAGTAATA+GGG | 0.517347 | 4.1:-24121255 | None:intergenic |
| GAAGGATATCCTAAGGGGAT+TGG | 0.519052 | 4.1:+24121495 | MS.gene067567:CDS |
| GCCATCATCATAGCAGGAAT+GGG | 0.519478 | 4.1:+24118377 | MS.gene067567:CDS |
| ACTTGGAGGGGTGTGCATAG+TGG | 0.520704 | 4.1:+24121539 | MS.gene067567:CDS |
| TCCCATTCCTGCTATGATGA+TGG | 0.520757 | 4.1:-24118378 | None:intergenic |
| AAGATCTTTGGAAGAAAATG+AGG | 0.523433 | 4.1:+24121602 | MS.gene067567:CDS |
| CTAGGAGTGCAACGGAGACA+AGG | 0.527505 | 4.1:-24118517 | None:intergenic |
| GGCCATCATCATAGCAGGAA+TGG | 0.527722 | 4.1:+24118376 | MS.gene067567:CDS |
| AGAGTTAAAATCCAAATGAT+GGG | 0.528348 | 4.1:+24121192 | MS.gene067567:CDS |
| GGTGCAATCATTGGATCTGT+AGG | 0.529168 | 4.1:+24121441 | MS.gene067567:CDS |
| TTCTTTCAAGAGAATTCTTG+TGG | 0.530678 | 4.1:+24120938 | MS.gene067567:CDS |
| TAGGCAGCATTTGTGGTTGG+TGG | 0.531743 | 4.1:-24120910 | None:intergenic |
| AGCAAACAGCAAGAATGGCT+TGG | 0.533200 | 4.1:-24121119 | None:intergenic |
| CATGGTATTTCTGGGGCTGT+TGG | 0.533358 | 4.1:+24121411 | MS.gene067567:CDS |
| TTCAAGGCCATCATCATAGC+AGG | 0.537123 | 4.1:+24118371 | MS.gene067567:CDS |
| TGACTTGACGAATTTCTTGG+TGG | 0.544986 | 4.1:-24118475 | None:intergenic |
| TGATGATGCCAGAAACTGCC+AGG | 0.550572 | 4.1:+24118990 | MS.gene067567:CDS |
| CAATAATAAGTCAATGCAGC+TGG | 0.561487 | 4.1:-24118962 | None:intergenic |
| ACAAGGGCTGAGACAACGAC+CGG | 0.565427 | 4.1:-24118500 | None:intergenic |
| TTCTTCCAAAGATCTTCCCA+TGG | 0.566058 | 4.1:-24121595 | None:intergenic |
| GGGTAGGCAGCATTTGTGGT+TGG | 0.568959 | 4.1:-24120913 | None:intergenic |
| TTTGCTAATAAAAGGACAAG+AGG | 0.571218 | 4.1:+24118767 | MS.gene067567:CDS |
| GGAGAAAATCATGATAACAA+AGG | 0.571581 | 4.1:+24121279 | MS.gene067567:CDS |
| AGAATTCTCTTGAAAGAAGA+GGG | 0.572284 | 4.1:-24120933 | None:intergenic |
| AAAGGCCGACGCCACGTCTA+CGG | 0.572932 | 4.1:+24118584 | MS.gene067567:CDS |
| CCTCACTTATCATACTTGGA+GGG | 0.573294 | 4.1:+24121526 | MS.gene067567:CDS |
| AAGGAGGAAGGATATCCTAA+GGG | 0.582496 | 4.1:+24121489 | MS.gene067567:CDS |
| GGTGAAGAAGTAGCCGGGAA+TGG | 0.582583 | 4.1:-24121145 | None:intergenic |
| CAAAATCAGAAAATGGCAAG+AGG | 0.585885 | 4.1:+24118299 | None:intergenic |
| TAGACGGTGAAGAAGTAGCC+GGG | 0.588557 | 4.1:-24121150 | None:intergenic |
| AGAGAATTCTTGTGGCGACA+TGG | 0.588933 | 4.1:+24120946 | MS.gene067567:CDS |
| TATTACTCTCATTGGACCAA+AGG | 0.589189 | 4.1:+24121258 | MS.gene067567:CDS |
| ACACTCATCACAAAGATGCT+AGG | 0.592024 | 4.1:+24118434 | MS.gene067567:CDS |
| TAGTGCAACTGTTACTATGG+TGG | 0.593095 | 4.1:+24118838 | MS.gene067567:CDS |
| CAGCTCCTATTCGGACGCCT+CGG | 0.593118 | 4.1:+24118554 | MS.gene067567:CDS |
| TTGGGCATCACATAAAGAGA+AGG | 0.594444 | 4.1:+24121470 | MS.gene067567:CDS |
| GTAGACGGTGAAGAAGTAGC+CGG | 0.596248 | 4.1:-24121151 | None:intergenic |
| TCCGAATAGGAGCTGACCGA+AGG | 0.598389 | 4.1:-24118546 | None:intergenic |
| CTCACTTATCATACTTGGAG+GGG | 0.600686 | 4.1:+24121527 | MS.gene067567:CDS |
| TTCTCTTGAAAGAAGAGGGT+AGG | 0.600721 | 4.1:-24120929 | None:intergenic |
| TCACATAAAGAGAAGGAGGA+AGG | 0.604798 | 4.1:+24121477 | MS.gene067567:CDS |
| AGGTTCAGGTCAACATGTCA+TGG | 0.614954 | 4.1:+24121393 | MS.gene067567:CDS |
| CATGCAACGTCAGCCTCCGG+CGG | 0.616211 | 4.1:-24118911 | None:intergenic |
| CATCTTTGTGATGAGTGTGA+TGG | 0.618124 | 4.1:-24118429 | None:intergenic |
| GAATAGGAGCTGACCGAAGG+CGG | 0.621080 | 4.1:-24118543 | None:intergenic |
| AACATGTCATGGTATTTCTG+GGG | 0.624270 | 4.1:+24121404 | MS.gene067567:CDS |
| GGCATCACATAAAGAGAAGG+AGG | 0.629025 | 4.1:+24121473 | MS.gene067567:CDS |
| TGATGAGTGTGATGGAGAAG+AGG | 0.629463 | 4.1:-24118421 | None:intergenic |
| CGATACCGTAGACGTGGCGT+CGG | 0.639282 | 4.1:-24118589 | None:intergenic |
| AGGAGGAAGGATATCCTAAG+GGG | 0.642903 | 4.1:+24121490 | MS.gene067567:CDS |
| AGAAATTCGTCAAGTCAACC+CGG | 0.643622 | 4.1:+24118481 | MS.gene067567:CDS |
| GGCGGTTCCTAGGAGTGCAA+CGG | 0.644168 | 4.1:-24118525 | None:intergenic |
| TAGGAGTGCAACGGAGACAA+GGG | 0.648022 | 4.1:-24118516 | None:intergenic |
| TGAAGAAGATGTGTACCAAG+AGG | 0.649402 | 4.1:+24121077 | MS.gene067567:CDS |
| GTTGCAAGCTGCAAAAGACA+TGG | 0.660760 | 4.1:+24120837 | MS.gene067567:CDS |
| TTCAGCTGGGACAATAAAGG+TGG | 0.666270 | 4.1:-24121358 | None:intergenic |
| TAGCTGGAAAGAGTTCAGCT+GGG | 0.667181 | 4.1:-24121371 | None:intergenic |
| CCCTCCAAGTATGATAAGTG+AGG | 0.670122 | 4.1:-24121526 | None:intergenic |
| TACGCGATCGATGAAGTAGA+CGG | 0.672938 | 4.1:-24121166 | None:intergenic |
| CAAGGGCTGAGACAACGACC+GGG | 0.674269 | 4.1:-24118499 | None:intergenic |
| GTTTGCTTGGTATTTCGCAG+CGG | 0.690623 | 4.1:+24118860 | MS.gene067567:CDS |
| CGGAGGCTGACGTTGCATGG+AGG | 0.694489 | 4.1:+24118915 | MS.gene067567:CDS |
| ATAAGGCGATACCGTAGACG+TGG | 0.708896 | 4.1:-24118595 | None:intergenic |
| GTCTACTTCATCGATCGCGT+AGG | 0.713972 | 4.1:+24121168 | MS.gene067567:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAAATATAAAAAA+TGG | + | chr4.1:24119228-24119247 | MS.gene067567:intron | 0.0% |
| !!! | TAAAATTTTAAAATTTTATA+AGG | - | chr4.1:24119555-24119574 | None:intergenic | 0.0% |
| !! | ATAAAATTAAAATTCAACTA+GGG | - | chr4.1:24119985-24120004 | None:intergenic | 10.0% |
| !! | TATAAAATTAAAATTCAACT+AGG | - | chr4.1:24119986-24120005 | None:intergenic | 10.0% |
| !! | TTAAAATCAAATGAAAATAA+TGG | + | chr4.1:24119895-24119914 | MS.gene067567:intron | 10.0% |
| !! | AATAATTAGTATAGAAAATG+CGG | + | chr4.1:24120249-24120268 | MS.gene067567:intron | 15.0% |
| !! | CTAAAACATTGTTAATTAAA+TGG | - | chr4.1:24120056-24120075 | None:intergenic | 15.0% |
| !! | GTGTATGTATAAAAAAAATT+AGG | + | chr4.1:24119273-24119292 | MS.gene067567:intron | 15.0% |
| !!! | AAAATGCATTATTTAAAACA+AGG | - | chr4.1:24119767-24119786 | None:intergenic | 15.0% |
| !!! | AAATGCATTATTTAAAACAA+GGG | - | chr4.1:24119766-24119785 | None:intergenic | 15.0% |
| !!! | ATTAATTTAATTTAAAGGTG+TGG | + | chr4.1:24120275-24120294 | MS.gene067567:intron | 15.0% |
| !!! | TATAAATTTCAAAAGTACAA+TGG | - | chr4.1:24119200-24119219 | None:intergenic | 15.0% |
| !! | AGTAAATAAATGAACAACAA+TGG | - | chr4.1:24119159-24119178 | None:intergenic | 20.0% |
| !! | ATGGTATTAATTAAATGTAC+TGG | + | chr4.1:24119914-24119933 | MS.gene067567:intron | 20.0% |
| !! | GTTTAAGGGAAAAAAATATT+GGG | - | chr4.1:24120387-24120406 | None:intergenic | 20.0% |
| !! | TGTTTAAGGGAAAAAAATAT+TGG | - | chr4.1:24120388-24120407 | None:intergenic | 20.0% |
| !! | TTTAAGGGAAAAAAATATTG+GGG | - | chr4.1:24120386-24120405 | None:intergenic | 20.0% |
| !!! | AAAATTCTTCAACTTTTAGT+CGG | + | chr4.1:24119592-24119611 | MS.gene067567:intron | 20.0% |
| !!! | AATTGAAGTACTATTATGTT+CGG | - | chr4.1:24120703-24120722 | None:intergenic | 20.0% |
| !!! | ATTCTTAAATATCTGAAGTT+TGG | + | chr4.1:24119073-24119092 | MS.gene067567:intron | 20.0% |
| !!! | GCATTTTCTATACTAATTAT+TGG | - | chr4.1:24120250-24120269 | None:intergenic | 20.0% |
| !!! | GGCTGATTAATTTAATTTAA+AGG | + | chr4.1:24120270-24120289 | MS.gene067567:intron | 20.0% |
| !!! | TCAAAACCTTATCTAAAATT+TGG | + | chr4.1:24120667-24120686 | MS.gene067567:intron | 20.0% |
| !!! | TGTTCATTTATTTACTTTTG+TGG | + | chr4.1:24119163-24119182 | MS.gene067567:intron | 20.0% |
| !!! | TTCAGTTGATCATTTATTTT+TGG | + | chr4.1:24120597-24120616 | MS.gene067567:intron | 20.0% |
| ! | AAAATATACTGATGTCTTCA+TGG | - | chr4.1:24119654-24119673 | None:intergenic | 25.0% |
| ! | AAAGAAGGAATAGAATAGAA+AGG | + | chr4.1:24120078-24120097 | MS.gene067567:intron | 25.0% |
| ! | AAATAAGAAAGTCATAGGTA+CGG | - | chr4.1:24119843-24119862 | None:intergenic | 25.0% |
| ! | AAATGGTTAAACTTACTTGA+AGG | - | chr4.1:24120039-24120058 | None:intergenic | 25.0% |
| ! | AACAATTGAATAACGTACTA+TGG | + | chr4.1:24120775-24120794 | MS.gene067567:intron | 25.0% |
| ! | AAGAACATTATCTTGTTACT+AGG | + | chr4.1:24120346-24120365 | MS.gene067567:intron | 25.0% |
| ! | AAGAGTTAAAATCCAAATGA+TGG | + | chr4.1:24121191-24121210 | MS.gene067567:CDS | 25.0% |
| ! | AATTATTGGCATTCTCTTAT+TGG | - | chr4.1:24120236-24120255 | None:intergenic | 25.0% |
| ! | AGAACATTATCTTGTTACTA+GGG | + | chr4.1:24120347-24120366 | MS.gene067567:intron | 25.0% |
| ! | AGAGTTAAAATCCAAATGAT+GGG | + | chr4.1:24121192-24121211 | MS.gene067567:CDS | 25.0% |
| ! | ATAAATATGTGAAGTAGAGA+GGG | - | chr4.1:24119027-24119046 | None:intergenic | 25.0% |
| ! | ATCGTTTGTATATTTCACTT+TGG | - | chr4.1:24121041-24121060 | None:intergenic | 25.0% |
| ! | CACTTATTATCGAAATGAAT+TGG | - | chr4.1:24120538-24120557 | None:intergenic | 25.0% |
| ! | CCTTAATACAAGTTTGAATT+CGG | - | chr4.1:24120456-24120475 | None:intergenic | 25.0% |
| ! | GAATAAAAAAAGTGAACACT+AGG | - | chr4.1:24119302-24119321 | None:intergenic | 25.0% |
| ! | GAGAAAATCATGATAACAAA+GGG | + | chr4.1:24121280-24121299 | MS.gene067567:CDS | 25.0% |
| ! | TAAATTAACATCGACAAAGT+TGG | - | chr4.1:24120567-24120586 | None:intergenic | 25.0% |
| ! | TATAAATATGTGAAGTAGAG+AGG | - | chr4.1:24119028-24119047 | None:intergenic | 25.0% |
| ! | TCGATTGGTAAACTAAAAAT+TGG | + | chr4.1:24120186-24120205 | MS.gene067567:intron | 25.0% |
| !! | CATTGCATTTTTAATGTTCA+TGG | + | chr4.1:24120744-24120763 | MS.gene067567:intron | 25.0% |
| !! | GTATTTACCACTTTGTTTAA+GGG | - | chr4.1:24120401-24120420 | None:intergenic | 25.0% |
| !! | TACCTATGACTTTCTTATTT+GGG | + | chr4.1:24119843-24119862 | MS.gene067567:intron | 25.0% |
| !!! | AACAATGTTTTAGTCAAAGA+AGG | + | chr4.1:24120063-24120082 | MS.gene067567:intron | 25.0% |
| !!! | AGTTGATCATTTATTTTTGG+TGG | + | chr4.1:24120600-24120619 | MS.gene067567:intron | 25.0% |
| !!! | ATGTATGTGTGAGTTTTAAA+CGG | - | chr4.1:24120423-24120442 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCCTTAAACAAAG+TGG | + | chr4.1:24120391-24120410 | MS.gene067567:intron | 25.0% |
| AACAATGGTATCAATGAAGT+TGG | - | chr4.1:24119144-24119163 | None:intergenic | 30.0% | |
| AACACAATACTACCATTTCA+AGG | + | chr4.1:24118355-24118374 | MS.gene067567:CDS | 30.0% | |
| AACCCAAATATCTTGTTAAC+GGG | + | chr4.1:24119365-24119384 | MS.gene067567:intron | 30.0% | |
| AAGAATTCTCTTGAAAGAAG+AGG | - | chr4.1:24120937-24120956 | None:intergenic | 30.0% | |
| ACTGCACATTAAAAGTAGTT+AGG | + | chr4.1:24119466-24119485 | MS.gene067567:intron | 30.0% | |
| AGAATTCTCTTGAAAGAAGA+GGG | - | chr4.1:24120936-24120955 | None:intergenic | 30.0% | |
| ATATATATCGAGTGATCGAT+TGG | + | chr4.1:24120171-24120190 | MS.gene067567:intron | 30.0% | |
| ATTAGCAAACTCAGACATAA+TGG | - | chr4.1:24118756-24118775 | None:intergenic | 30.0% | |
| CAAGAAATGTCCATTTCAAA+TGG | - | chr4.1:24119870-24119889 | None:intergenic | 30.0% | |
| CCGAATTCAAACTTGTATTA+AGG | + | chr4.1:24120453-24120472 | MS.gene067567:intron | 30.0% | |
| GAACCCAAATATCTTGTTAA+CGG | + | chr4.1:24119364-24119383 | MS.gene067567:intron | 30.0% | |
| GACATAATGGTAGAAGATAA+AGG | - | chr4.1:24118743-24118762 | None:intergenic | 30.0% | |
| GGAGAAAATCATGATAACAA+AGG | + | chr4.1:24121279-24121298 | MS.gene067567:CDS | 30.0% | |
| GTACCTATGACTTTCTTATT+TGG | + | chr4.1:24119842-24119861 | MS.gene067567:intron | 30.0% | |
| GTTTCTTCAGATTCTTCTTA+GGG | + | chr4.1:24118696-24118715 | MS.gene067567:CDS | 30.0% | |
| TAAATATGTGAAGTAGAGAG+GGG | - | chr4.1:24119026-24119045 | None:intergenic | 30.0% | |
| TACCCGTTAACAAGATATTT+GGG | - | chr4.1:24119370-24119389 | None:intergenic | 30.0% | |
| TCATTTCGATAATAAGTGTG+AGG | + | chr4.1:24120540-24120559 | MS.gene067567:intron | 30.0% | |
| TGAAGAAAAAACCCATCATT+TGG | - | chr4.1:24121206-24121225 | None:intergenic | 30.0% | |
| TTATTTGGGTCCATTTGAAA+TGG | + | chr4.1:24119857-24119876 | MS.gene067567:intron | 30.0% | |
| TTCTTTCAAGAGAATTCTTG+TGG | + | chr4.1:24120938-24120957 | MS.gene067567:CDS | 30.0% | |
| TTTGCTAATAAAAGGACAAG+AGG | + | chr4.1:24118767-24118786 | MS.gene067567:CDS | 30.0% | |
| ! | AAGATCTTTGGAAGAAAATG+AGG | + | chr4.1:24121602-24121621 | MS.gene067567:CDS | 30.0% |
| ! | CATTTGAAATGGACATTTCT+TGG | + | chr4.1:24119868-24119887 | MS.gene067567:intron | 30.0% |
| ! | GCTTGTTAGCATCAATAATA+AGG | - | chr4.1:24118615-24118634 | None:intergenic | 30.0% |
| ! | GCTTTCTTCTTTGCAAATTT+TGG | + | chr4.1:24121324-24121343 | MS.gene067567:CDS | 30.0% |
| ! | GGTATTTACCACTTTGTTTA+AGG | - | chr4.1:24120402-24120421 | None:intergenic | 30.0% |
| ! | GTGGAACCAAATTTTAGATA+AGG | - | chr4.1:24120676-24120695 | None:intergenic | 30.0% |
| ! | GTTATCATGATTTTCTCCTT+TGG | - | chr4.1:24121277-24121296 | None:intergenic | 30.0% |
| !! | CGAAGTGTCTATAAAACTTT+TGG | + | chr4.1:24119621-24119640 | MS.gene067567:intron | 30.0% |
| !! | TGTCTGAGTTTGCTAATAAA+AGG | + | chr4.1:24118759-24118778 | MS.gene067567:CDS | 30.0% |
| !! | TTTCACTTTGGAATAGAACT+TGG | - | chr4.1:24121029-24121048 | None:intergenic | 30.0% |
| !!! | AATGATGGGTTTTTTCTTCA+TGG | + | chr4.1:24121206-24121225 | MS.gene067567:CDS | 30.0% |
| !!! | CAGTGTCATTTTTTGCTTTA+GGG | + | chr4.1:24121229-24121248 | MS.gene067567:CDS | 30.0% |
| !!! | TGTTACTTACTTTTTCACCA+AGG | + | chr4.1:24121569-24121588 | MS.gene067567:CDS | 30.0% |
| AAAGCCTCACTTATCATACT+TGG | + | chr4.1:24121522-24121541 | MS.gene067567:CDS | 35.0% | |
| AAAGGGTTCATGGTTATCTA+TGG | + | chr4.1:24121297-24121316 | MS.gene067567:CDS | 35.0% | |
| ACATTATCTTGTTACTAGGG+AGG | + | chr4.1:24120350-24120369 | MS.gene067567:intron | 35.0% | |
| ATGGATTCTCTTCGGTTATT+TGG | - | chr4.1:24120888-24120907 | None:intergenic | 35.0% | |
| ATTAAATTCCTTGCGTCATG+TGG | + | chr4.1:24120132-24120151 | MS.gene067567:intron | 35.0% | |
| CAACATGTCATGGTATTTCT+GGG | + | chr4.1:24121403-24121422 | MS.gene067567:CDS | 35.0% | |
| CAATAATAAGTCAATGCAGC+TGG | - | chr4.1:24118965-24118984 | None:intergenic | 35.0% | |
| CACGAAAAAATGCATGATGA+AGG | - | chr4.1:24120633-24120652 | None:intergenic | 35.0% | |
| CATTAGGTATACAGCATTAG+TGG | + | chr4.1:24120804-24120823 | MS.gene067567:intron | 35.0% | |
| GACCCAAATAAGAAAGTCAT+AGG | - | chr4.1:24119848-24119867 | None:intergenic | 35.0% | |
| GGTTTCTTCAGATTCTTCTT+AGG | + | chr4.1:24118695-24118714 | MS.gene067567:CDS | 35.0% | |
| GTACCCGTTAACAAGATATT+TGG | - | chr4.1:24119371-24119390 | None:intergenic | 35.0% | |
| TACTATTATGTTCGGCTAAG+TGG | - | chr4.1:24120695-24120714 | None:intergenic | 35.0% | |
| TATTACTCTCATTGGACCAA+AGG | + | chr4.1:24121258-24121277 | MS.gene067567:CDS | 35.0% | |
| TCAACATGTCATGGTATTTC+TGG | + | chr4.1:24121402-24121421 | MS.gene067567:CDS | 35.0% | |
| TCATGATAACAAAGGGTTCA+TGG | + | chr4.1:24121287-24121306 | MS.gene067567:CDS | 35.0% | |
| TCGACATTATCAGTTGTGTT+AGG | + | chr4.1:24120493-24120512 | MS.gene067567:intron | 35.0% | |
| TGGATCTGTAGGATTTCTTT+GGG | + | chr4.1:24121452-24121471 | MS.gene067567:CDS | 35.0% | |
| TTGGATCTGTAGGATTTCTT+TGG | + | chr4.1:24121451-24121470 | MS.gene067567:CDS | 35.0% | |
| TTGGTCCAATGAGAGTAATA+GGG | - | chr4.1:24121258-24121277 | None:intergenic | 35.0% | |
| TTTGGTCCAATGAGAGTAAT+AGG | - | chr4.1:24121259-24121278 | None:intergenic | 35.0% | |
| ! | AACATGTCATGGTATTTCTG+GGG | + | chr4.1:24121404-24121423 | MS.gene067567:CDS | 35.0% |
| ! | AAGAGGTTCTTTTATAGCTG+CGG | + | chr4.1:24118784-24118803 | MS.gene067567:CDS | 35.0% |
| ! | AAGATATTTGGGTTCGATAG+TGG | - | chr4.1:24119359-24119378 | None:intergenic | 35.0% |
| ! | AATTTAAAGGTGTGGAAGTG+AGG | + | chr4.1:24120283-24120302 | MS.gene067567:intron | 35.0% |
| ! | ACAATAAAGGTGGTAGTGTT+AGG | - | chr4.1:24121351-24121370 | None:intergenic | 35.0% |
| ! | GCTTGTGTTTTACTATCTCT+TGG | + | chr4.1:24118674-24118693 | MS.gene067567:CDS | 35.0% |
| ! | TATGCAAGGGTTTGGTATAT+TGG | + | chr4.1:24118814-24118833 | MS.gene067567:CDS | 35.0% |
| ! | TTTTCGCATGTTCTGCTAAT+TGG | + | chr4.1:24120977-24120996 | MS.gene067567:CDS | 35.0% |
| ! | TTTTTCACCAAGGAAACCAT+GGG | + | chr4.1:24121579-24121598 | MS.gene067567:CDS | 35.0% |
| !! | ATTGTGTTTTTGCTGAGTCA+AGG | - | chr4.1:24118343-24118362 | None:intergenic | 35.0% |
| !! | CAGCTGCATTGACTTATTAT+TGG | + | chr4.1:24118963-24118982 | MS.gene067567:CDS | 35.0% |
| !! | CGATAGTGGAAAACAAATGT+AGG | - | chr4.1:24119345-24119364 | None:intergenic | 35.0% |
| !! | CTTCTTCATCTTTTTCGTTG+AGG | - | chr4.1:24121065-24121084 | None:intergenic | 35.0% |
| !! | TGGAGGTTGATATTGATGAT+TGG | + | chr4.1:24118932-24118951 | MS.gene067567:CDS | 35.0% |
| !! | TTGTGTTTTTGCTGAGTCAA+GGG | - | chr4.1:24118342-24118361 | None:intergenic | 35.0% |
| !!! | GCAGTGTCATTTTTTGCTTT+AGG | + | chr4.1:24121228-24121247 | MS.gene067567:CDS | 35.0% |
| !!! | GTTTTTTCTATGCAAGGGTT+TGG | + | chr4.1:24118806-24118825 | MS.gene067567:CDS | 35.0% |
| AACTTAAACCACATGACGCA+AGG | - | chr4.1:24120143-24120162 | None:intergenic | 40.0% | |
| AAGGAGGAAGGATATCCTAA+GGG | + | chr4.1:24121489-24121508 | MS.gene067567:CDS | 40.0% | |
| ACACTCATCACAAAGATGCT+AGG | + | chr4.1:24118434-24118453 | MS.gene067567:CDS | 40.0% | |
| AGAAATTCGTCAAGTCAACC+CGG | + | chr4.1:24118481-24118500 | MS.gene067567:CDS | 40.0% | |
| CATCTTTGTGATGAGTGTGA+TGG | - | chr4.1:24118432-24118451 | None:intergenic | 40.0% | |
| CCTCACTTATCATACTTGGA+GGG | + | chr4.1:24121526-24121545 | MS.gene067567:CDS | 40.0% | |
| CTCACTTATCATACTTGGAG+GGG | + | chr4.1:24121527-24121546 | MS.gene067567:CDS | 40.0% | |
| CTGGCAAAAGATGAGAAAAC+TGG | + | chr4.1:24119933-24119952 | MS.gene067567:intron | 40.0% | |
| GGTTTCCCTATTACTCTCAT+TGG | + | chr4.1:24121250-24121269 | MS.gene067567:CDS | 40.0% | |
| TAGTGCAACTGTTACTATGG+TGG | + | chr4.1:24118838-24118857 | MS.gene067567:CDS | 40.0% | |
| TCACATAAAGAGAAGGAGGA+AGG | + | chr4.1:24121477-24121496 | MS.gene067567:CDS | 40.0% | |
| TGAAGAAGATGTGTACCAAG+AGG | + | chr4.1:24121077-24121096 | MS.gene067567:CDS | 40.0% | |
| TGACTTGACGAATTTCTTGG+TGG | - | chr4.1:24118478-24118497 | None:intergenic | 40.0% | |
| TTCAGATTCTTCTTAGGGCT+TGG | + | chr4.1:24118701-24118720 | MS.gene067567:CDS | 40.0% | |
| TTCTCTTGAAAGAAGAGGGT+AGG | - | chr4.1:24120932-24120951 | None:intergenic | 40.0% | |
| TTCTTCCAAAGATCTTCCCA+TGG | - | chr4.1:24121598-24121617 | None:intergenic | 40.0% | |
| TTCTTCTTAGGGCTTGGAAT+TGG | + | chr4.1:24118707-24118726 | MS.gene067567:CDS | 40.0% | |
| TTGGGCATCACATAAAGAGA+AGG | + | chr4.1:24121470-24121489 | MS.gene067567:CDS | 40.0% | |
| ! | AGCTCTCTTTGTTGTACAGA+TGG | - | chr4.1:24118657-24118676 | None:intergenic | 40.0% |
| ! | TTGACGAATTTCTTGGTGGT+CGG | - | chr4.1:24118474-24118493 | None:intergenic | 40.0% |
| !! | CTATGATGATGGCCTTGAAA+TGG | - | chr4.1:24118370-24118389 | None:intergenic | 40.0% |
| !! | CTTTTTCACCAAGGAAACCA+TGG | + | chr4.1:24121578-24121597 | MS.gene067567:CDS | 40.0% |
| !! | GGTTGACTTGACGAATTTCT+TGG | - | chr4.1:24118481-24118500 | None:intergenic | 40.0% |
| !! | TGGTGGTAATGGATTCTCTT+CGG | - | chr4.1:24120896-24120915 | None:intergenic | 40.0% |
| !! | TGTTACTATGGTGGTTTGCT+TGG | + | chr4.1:24118847-24118866 | MS.gene067567:CDS | 40.0% |
| !!! | CTGCGGTTTTTTCTATGCAA+GGG | + | chr4.1:24118801-24118820 | MS.gene067567:CDS | 40.0% |
| AACTCTTTCCAGCTAGGTTC+AGG | + | chr4.1:24121379-24121398 | MS.gene067567:CDS | 45.0% | |
| ACAAAGCAAATCCACGTGGA+TGG | - | chr4.1:24120106-24120125 | None:intergenic | 45.0% | |
| AGAAACTACCTGGCAGTTTC+TGG | - | chr4.1:24119001-24119020 | None:intergenic | 45.0% | |
| AGAGAATTCTTGTGGCGACA+TGG | + | chr4.1:24120946-24120965 | MS.gene067567:CDS | 45.0% | |
| AGATCTTCCCATGGTTTCCT+TGG | - | chr4.1:24121589-24121608 | None:intergenic | 45.0% | |
| AGCAAACAGCAAGAATGGCT+TGG | - | chr4.1:24121122-24121141 | None:intergenic | 45.0% | |
| AGGAGGAAGGATATCCTAAG+GGG | + | chr4.1:24121490-24121509 | MS.gene067567:CDS | 45.0% | |
| AGGTTCAGGTCAACATGTCA+TGG | + | chr4.1:24121393-24121412 | MS.gene067567:CDS | 45.0% | |
| ATAGAAAGGAACCATCCACG+TGG | + | chr4.1:24120092-24120111 | MS.gene067567:intron | 45.0% | |
| CATCGATCAGTCCTTGTCTT+GGG | + | chr4.1:24120013-24120032 | MS.gene067567:intron | 45.0% | |
| CCCTCCAAGTATGATAAGTG+AGG | - | chr4.1:24121529-24121548 | None:intergenic | 45.0% | |
| CGTACTATGGTGTGTGCATT+AGG | + | chr4.1:24120788-24120807 | MS.gene067567:intron | 45.0% | |
| GAAGGAGGAAGGATATCCTA+AGG | + | chr4.1:24121488-24121507 | MS.gene067567:CDS | 45.0% | |
| GAAGGATATCCTAAGGGGAT+TGG | + | chr4.1:24121495-24121514 | MS.gene067567:CDS | 45.0% | |
| GAGTTCAGCTGGGACAATAA+AGG | - | chr4.1:24121364-24121383 | None:intergenic | 45.0% | |
| GCAAACAAAGCAAATCCACG+TGG | - | chr4.1:24120110-24120129 | None:intergenic | 45.0% | |
| GCCATCATCATAGCAGGAAT+GGG | + | chr4.1:24118377-24118396 | MS.gene067567:CDS | 45.0% | |
| GCCTCACTTATCATACTTGG+AGG | + | chr4.1:24121525-24121544 | MS.gene067567:CDS | 45.0% | |
| GCTTTCATTCCAATCCCCTT+AGG | - | chr4.1:24121507-24121526 | None:intergenic | 45.0% | |
| GGAAACCATGGGAAGATCTT+TGG | + | chr4.1:24121590-24121609 | MS.gene067567:CDS | 45.0% | |
| GGCATCACATAAAGAGAAGG+AGG | + | chr4.1:24121473-24121492 | MS.gene067567:CDS | 45.0% | |
| GGCTAGTGCAACTGTTACTA+TGG | + | chr4.1:24118835-24118854 | MS.gene067567:CDS | 45.0% | |
| GGTAGAGCAAACAGCAAGAA+TGG | - | chr4.1:24121127-24121146 | None:intergenic | 45.0% | |
| GGTGCAATCATTGGATCTGT+AGG | + | chr4.1:24121441-24121460 | MS.gene067567:CDS | 45.0% | |
| GTTGCAAGCTGCAAAAGACA+TGG | + | chr4.1:24120837-24120856 | MS.gene067567:CDS | 45.0% | |
| GTTTGCTTGGTATTTCGCAG+CGG | + | chr4.1:24118860-24118879 | MS.gene067567:CDS | 45.0% | |
| TACGCGATCGATGAAGTAGA+CGG | - | chr4.1:24121169-24121188 | None:intergenic | 45.0% | |
| TAGCTGGAAAGAGTTCAGCT+GGG | - | chr4.1:24121374-24121393 | None:intergenic | 45.0% | |
| TCATCGATCAGTCCTTGTCT+TGG | + | chr4.1:24120012-24120031 | MS.gene067567:intron | 45.0% | |
| TCCCATTCCTGCTATGATGA+TGG | - | chr4.1:24118381-24118400 | None:intergenic | 45.0% | |
| TTACTTGAAGGCCCAAGACA+AGG | - | chr4.1:24120027-24120046 | None:intergenic | 45.0% | |
| TTCAAGGCCATCATCATAGC+AGG | + | chr4.1:24118371-24118390 | MS.gene067567:CDS | 45.0% | |
| TTCAGCTGGGACAATAAAGG+TGG | - | chr4.1:24121361-24121380 | None:intergenic | 45.0% | |
| TTCTTAGGGCTTGGAATTGG+TGG | + | chr4.1:24118710-24118729 | MS.gene067567:CDS | 45.0% | |
| TTGCAAGATGGAAAGCCTCT+TGG | - | chr4.1:24121095-24121114 | None:intergenic | 45.0% | |
| ! | AGCAGGAATGGGACTTTTCA+CGG | + | chr4.1:24118388-24118407 | MS.gene067567:CDS | 45.0% |
| ! | CTAACAAGCTCTCTAGCTTC+TGG | + | chr4.1:24118626-24118645 | MS.gene067567:CDS | 45.0% |
| ! | TGATGAGTGTGATGGAGAAG+AGG | - | chr4.1:24118424-24118443 | None:intergenic | 45.0% |
| ! | TGGCTTGGATTCTTGCAAGA+TGG | - | chr4.1:24121107-24121126 | None:intergenic | 45.0% |
| !! | GCATTTGTGGTTGGTGGTAA+TGG | - | chr4.1:24120907-24120926 | None:intergenic | 45.0% |
| !! | GGTAAGGTTGGTGCAATCAT+TGG | + | chr4.1:24121432-24121451 | MS.gene067567:CDS | 45.0% |
| !! | TATTTCTGGGGCTGTTGGTA+AGG | + | chr4.1:24121416-24121435 | MS.gene067567:CDS | 45.0% |
| !!! | GCTGCGGTTTTTTCTATGCA+AGG | + | chr4.1:24118800-24118819 | MS.gene067567:CDS | 45.0% |
| AAGAGGGTAGGCAGCATTTG+TGG | - | chr4.1:24120920-24120939 | None:intergenic | 50.0% | |
| ATAAGGCGATACCGTAGACG+TGG | - | chr4.1:24118598-24118617 | None:intergenic | 50.0% | |
| CAGCTGAACTCTTTCCAGCT+AGG | + | chr4.1:24121373-24121392 | MS.gene067567:CDS | 50.0% | |
| CATGTTGACCTGAACCTAGC+TGG | - | chr4.1:24121390-24121409 | None:intergenic | 50.0% | |
| CTAGCTGGAAAGAGTTCAGC+TGG | - | chr4.1:24121375-24121394 | None:intergenic | 50.0% | |
| GCTGTTTGCTCTACCATTCC+CGG | + | chr4.1:24121132-24121151 | MS.gene067567:CDS | 50.0% | |
| GGCCATCATCATAGCAGGAA+TGG | + | chr4.1:24118376-24118395 | MS.gene067567:CDS | 50.0% | |
| GTAGACGGTGAAGAAGTAGC+CGG | - | chr4.1:24121154-24121173 | None:intergenic | 50.0% | |
| GTCTACTTCATCGATCGCGT+AGG | + | chr4.1:24121168-24121187 | MS.gene067567:CDS | 50.0% | |
| TAGACGGTGAAGAAGTAGCC+GGG | - | chr4.1:24121153-24121172 | None:intergenic | 50.0% | |
| TAGGCAGCATTTGTGGTTGG+TGG | - | chr4.1:24120913-24120932 | None:intergenic | 50.0% | |
| ! | TAGGAGTGCAACGGAGACAA+GGG | - | chr4.1:24118519-24118538 | None:intergenic | 50.0% |
| ! | TGATGATGCCAGAAACTGCC+AGG | + | chr4.1:24118990-24119009 | MS.gene067567:CDS | 50.0% |
| !! | CATGGTATTTCTGGGGCTGT+TGG | + | chr4.1:24121411-24121430 | MS.gene067567:CDS | 50.0% |
| ACAAGGGCTGAGACAACGAC+CGG | - | chr4.1:24118503-24118522 | None:intergenic | 55.0% | |
| ATTTCGCAGCGGTTCGAAGC+CGG | + | chr4.1:24118871-24118890 | MS.gene067567:CDS | 55.0% | |
| CTTGTCTCCGTTGCACTCCT+AGG | + | chr4.1:24118518-24118537 | MS.gene067567:CDS | 55.0% | |
| GAATAGGAGCTGACCGAAGG+CGG | - | chr4.1:24118546-24118565 | None:intergenic | 55.0% | |
| GAGAGGGGCAAGAAACTACC+TGG | - | chr4.1:24119011-24119030 | None:intergenic | 55.0% | |
| GCCTTCGGTCAGCTCCTATT+CGG | + | chr4.1:24118545-24118564 | MS.gene067567:CDS | 55.0% | |
| GGCACATCAAAAGCCGTCTC+CGG | - | chr4.1:24118893-24118912 | None:intergenic | 55.0% | |
| GGGTAGGCAGCATTTGTGGT+TGG | - | chr4.1:24120916-24120935 | None:intergenic | 55.0% | |
| GGTGAAGAAGTAGCCGGGAA+TGG | - | chr4.1:24121148-24121167 | None:intergenic | 55.0% | |
| TCCGAATAGGAGCTGACCGA+AGG | - | chr4.1:24118549-24118568 | None:intergenic | 55.0% | |
| ! | ACTTGGAGGGGTGTGCATAG+TGG | + | chr4.1:24121539-24121558 | MS.gene067567:CDS | 55.0% |
| ! | CTAGGAGTGCAACGGAGACA+AGG | - | chr4.1:24118520-24118539 | None:intergenic | 55.0% |
| ! | CTTGGAGGGGTGTGCATAGT+GGG | + | chr4.1:24121540-24121559 | MS.gene067567:CDS | 55.0% |
| ! | TCTGGGGCTGTTGGTAAGGT+TGG | + | chr4.1:24121420-24121439 | MS.gene067567:CDS | 55.0% |
| AAAGGCCGACGCCACGTCTA+CGG | + | chr4.1:24118584-24118603 | MS.gene067567:CDS | 60.0% | |
| CAAGGGCTGAGACAACGACC+GGG | - | chr4.1:24118502-24118521 | None:intergenic | 60.0% | |
| CAGCTCCTATTCGGACGCCT+CGG | + | chr4.1:24118554-24118573 | MS.gene067567:CDS | 60.0% | |
| CGATACCGTAGACGTGGCGT+CGG | - | chr4.1:24118592-24118611 | None:intergenic | 60.0% | |
| CTCCATGCAACGTCAGCCTC+CGG | - | chr4.1:24118917-24118936 | None:intergenic | 60.0% | |
| GCACTCCTAGGAACCGCCTT+CGG | + | chr4.1:24118530-24118549 | MS.gene067567:CDS | 60.0% | |
| GGACGCCTCGGAGACCTAAA+AGG | + | chr4.1:24118566-24118585 | MS.gene067567:CDS | 60.0% | |
| GTACTGCACAGCACAGCACG+CGG | - | chr4.1:24119818-24119837 | None:intergenic | 60.0% | |
| ! | GACGGCTTTTGATGTGCCGC+CGG | + | chr4.1:24118895-24118914 | MS.gene067567:CDS | 60.0% |
| ! | GGCGGTTCCTAGGAGTGCAA+CGG | - | chr4.1:24118528-24118547 | None:intergenic | 60.0% |
| !! | GTCGGCCTTTTAGGTCTCCG+AGG | - | chr4.1:24118574-24118593 | None:intergenic | 60.0% |
| !!! | AGACGTGGCGTCGGCCTTTT+AGG | - | chr4.1:24118583-24118602 | None:intergenic | 60.0% |
| CAGCGGTTCGAAGCCGGAGA+CGG | + | chr4.1:24118877-24118896 | MS.gene067567:CDS | 65.0% | |
| CATGCAACGTCAGCCTCCGG+CGG | - | chr4.1:24118914-24118933 | None:intergenic | 65.0% | |
| CGGAGGCTGACGTTGCATGG+AGG | + | chr4.1:24118915-24118934 | MS.gene067567:CDS | 65.0% | |
| GCTGACCGAAGGCGGTTCCT+AGG | - | chr4.1:24118538-24118557 | None:intergenic | 65.0% | |
| ! | GGCTTTTGATGTGCCGCCGG+AGG | + | chr4.1:24118898-24118917 | MS.gene067567:CDS | 65.0% |
| ! | GGTCTCCGAGGCGTCCGAAT+AGG | - | chr4.1:24118562-24118581 | None:intergenic | 65.0% |
| CGCCGGAGGCTGACGTTGCA+TGG | + | chr4.1:24118912-24118931 | MS.gene067567:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 24118311 | 24121665 | 24118311 | ID=MS.gene067567 |
| chr4.1 | mRNA | 24118311 | 24121665 | 24118311 | ID=MS.gene067567.t1;Parent=MS.gene067567 |
| chr4.1 | exon | 24118311 | 24119011 | 24118311 | ID=MS.gene067567.t1.exon1;Parent=MS.gene067567.t1 |
| chr4.1 | CDS | 24118311 | 24119011 | 24118311 | ID=cds.MS.gene067567.t1;Parent=MS.gene067567.t1 |
| chr4.1 | exon | 24120810 | 24121665 | 24120810 | ID=MS.gene067567.t1.exon2;Parent=MS.gene067567.t1 |
| chr4.1 | CDS | 24120810 | 24121665 | 24120810 | ID=cds.MS.gene067567.t1;Parent=MS.gene067567.t1 |
| Gene Sequence |
| Protein sequence |
